Miyakogusa Predicted Gene

Lj0g3v0078549.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0078549.1 Non Chatacterized Hit- tr|D8RSQ5|D8RSQ5_SELML
Putative uncharacterized protein OS=Selaginella moelle,51.14,3e-18,
,CUFF.4006.1
         (100 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19340.1 | Symbols:  | Protein of unknown function (DUF3754) ...   134   1e-32
AT5G13940.1 | Symbols:  | aminopeptidases | chr5:4490263-4495585...    80   2e-16

>AT3G19340.1 | Symbols:  | Protein of unknown function (DUF3754) |
           chr3:6701387-6704071 REVERSE LENGTH=487
          Length = 487

 Score =  134 bits (337), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/92 (69%), Positives = 75/92 (81%)

Query: 9   ISHEKKKEVIRLEREYVIEITKPKLIMKLANLIKLSADRVEFLKLCKRIEYTIRAWYLLH 68
           ++ +  KEVIRLE E VI I KPKLIM LANLI+ S DR EFLKLCKRIEYT+RAWYLL 
Sbjct: 1   MAEQHNKEVIRLEPESVIPILKPKLIMTLANLIEHSNDRQEFLKLCKRIEYTVRAWYLLQ 60

Query: 69  FEDMMQLYSLFDPLYGTQKLKNQKFTSEEIDA 100
           FED+MQLYSLFDP++G QK++ Q  TS+EID 
Sbjct: 61  FEDLMQLYSLFDPVHGAQKIQQQNLTSQEIDV 92


>AT5G13940.1 | Symbols:  | aminopeptidases | chr5:4490263-4495585
           REVERSE LENGTH=809
          Length = 809

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 45/60 (75%)

Query: 41  IKLSADRVEFLKLCKRIEYTIRAWYLLHFEDMMQLYSLFDPLYGTQKLKNQKFTSEEIDA 100
           IK   +R EFL+ C+R+E TIRAWY LHFED+MQLYSLF+P+ G  +L  Q  ++ EIDA
Sbjct: 321 IKDKWEREEFLRFCQRVECTIRAWYHLHFEDLMQLYSLFEPVRGAHRLNQQNLSTREIDA 380