Miyakogusa Predicted Gene

Lj0g3v0078179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0078179.1 Non Chatacterized Hit- tr|D7KGP8|D7KGP8_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,64.29,2e-18,FAMILY NOT NAMED,NULL; C2 domain
(Calcium/lipid-binding domain, CaLB),C2 calcium/lipid-binding
domai,CUFF.4155.1
         (420 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55530.2 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   343   1e-94
AT5G55530.3 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   343   1e-94
AT5G55530.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   343   1e-94
AT1G50570.2 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   304   8e-83
AT1G50570.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   304   8e-83
AT5G12300.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...   155   6e-38

>AT5G55530.2 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr5:22494439-22495656 FORWARD
           LENGTH=405
          Length = 405

 Score =  343 bits (881), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 203/429 (47%), Positives = 266/429 (62%), Gaps = 33/429 (7%)

Query: 1   MESPQSVVSPFKGSILGDGEKYKSDVFPRSSSHLSKDFEVNGKEVVVSNPEEFIGVVDVY 60
           M+SPQSVVSPFK   +G+ E   S+   +SS + S     NGK+      ++ +G ++VY
Sbjct: 1   MDSPQSVVSPFK---IGESENENSNSV-QSSGNQSNGINSNGKDSKSCGRQDLVGALEVY 56

Query: 61  IHQARDIHNICIYHRQGVYAKIWLTSNPENTVSAKTINGGGRNPVFNENLRLSVKTVESS 120
           +HQARDIHNICIYH+Q VYAK+ LTS+P+ +VS K INGGGRNPVF++N++L V+ +++S
Sbjct: 57  VHQARDIHNICIYHKQDVYAKLCLTSDPDKSVSTKIINGGGRNPVFDDNVKLDVRVLDTS 116

Query: 121 LKCEIWMLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQLS 180
           LKCEI+M+SRVKNYLEDQLLGF LVP                    TDL+H+PAGFVQLS
Sbjct: 117 LKCEIYMMSRVKNYLEDQLLGFTLVPMSELLFKNGKLEKEFSLSS-TDLYHSPAGFVQLS 175

Query: 181 LAYAGASPDVMAISAMPSELDTNCTEKD---SESLARDLDKIEFPDPKIANEDHMMVSEY 237
           L+Y G+ PDVMAI +MPS +  + T KD   SES+  +LDKIEFPDP +ANE+  MVSEY
Sbjct: 176 LSYYGSYPDVMAIPSMPSSVSIDETTKDPEGSESVPGELDKIEFPDPNVANENEKMVSEY 235

Query: 238 IGIPCE--ESQCSDSLATTTDTEN--SEAGVQLVERFSA-CSVESNGVXXXXXXXXXXXX 292
            GI C   +S+ SDSL T+ D EN  + +   ++++ S   S  +NG             
Sbjct: 236 FGISCSTIDSETSDSLVTS-DAENHVTNSVTSILKQDSPESSNATNGAASPHASAHSATE 294

Query: 293 XXXXXXXXXXXXXXPNQEQISGTKEKSVVDVKDGGESDSSNGVVNNESFPKPVVSVNIEP 352
                         PN E +S    K+            ++G  + E   K V++V +EP
Sbjct: 295 T-------------PNHEHLSVVNSKASSQES----ESEASGETSEEKTVKSVLTVKVEP 337

Query: 353 EPTMVQQDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQGSKSSN-SR 411
           E  +VQQDIVDMYMKSMQQFT+SLAKMKLP+D +           + QKL   KS+N SR
Sbjct: 338 ESKVVQQDIVDMYMKSMQQFTDSLAKMKLPLDID-SPTKSENSSSDSQKLPTPKSNNGSR 396

Query: 412 VFYGSRAFF 420
           VFYGSR FF
Sbjct: 397 VFYGSRPFF 405


>AT5G55530.3 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr5:22494439-22495656 FORWARD
           LENGTH=405
          Length = 405

 Score =  343 bits (881), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 203/429 (47%), Positives = 266/429 (62%), Gaps = 33/429 (7%)

Query: 1   MESPQSVVSPFKGSILGDGEKYKSDVFPRSSSHLSKDFEVNGKEVVVSNPEEFIGVVDVY 60
           M+SPQSVVSPFK   +G+ E   S+   +SS + S     NGK+      ++ +G ++VY
Sbjct: 1   MDSPQSVVSPFK---IGESENENSNSV-QSSGNQSNGINSNGKDSKSCGRQDLVGALEVY 56

Query: 61  IHQARDIHNICIYHRQGVYAKIWLTSNPENTVSAKTINGGGRNPVFNENLRLSVKTVESS 120
           +HQARDIHNICIYH+Q VYAK+ LTS+P+ +VS K INGGGRNPVF++N++L V+ +++S
Sbjct: 57  VHQARDIHNICIYHKQDVYAKLCLTSDPDKSVSTKIINGGGRNPVFDDNVKLDVRVLDTS 116

Query: 121 LKCEIWMLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQLS 180
           LKCEI+M+SRVKNYLEDQLLGF LVP                    TDL+H+PAGFVQLS
Sbjct: 117 LKCEIYMMSRVKNYLEDQLLGFTLVPMSELLFKNGKLEKEFSLSS-TDLYHSPAGFVQLS 175

Query: 181 LAYAGASPDVMAISAMPSELDTNCTEKD---SESLARDLDKIEFPDPKIANEDHMMVSEY 237
           L+Y G+ PDVMAI +MPS +  + T KD   SES+  +LDKIEFPDP +ANE+  MVSEY
Sbjct: 176 LSYYGSYPDVMAIPSMPSSVSIDETTKDPEGSESVPGELDKIEFPDPNVANENEKMVSEY 235

Query: 238 IGIPCE--ESQCSDSLATTTDTEN--SEAGVQLVERFSA-CSVESNGVXXXXXXXXXXXX 292
            GI C   +S+ SDSL T+ D EN  + +   ++++ S   S  +NG             
Sbjct: 236 FGISCSTIDSETSDSLVTS-DAENHVTNSVTSILKQDSPESSNATNGAASPHASAHSATE 294

Query: 293 XXXXXXXXXXXXXXPNQEQISGTKEKSVVDVKDGGESDSSNGVVNNESFPKPVVSVNIEP 352
                         PN E +S    K+            ++G  + E   K V++V +EP
Sbjct: 295 T-------------PNHEHLSVVNSKASSQES----ESEASGETSEEKTVKSVLTVKVEP 337

Query: 353 EPTMVQQDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQGSKSSN-SR 411
           E  +VQQDIVDMYMKSMQQFT+SLAKMKLP+D +           + QKL   KS+N SR
Sbjct: 338 ESKVVQQDIVDMYMKSMQQFTDSLAKMKLPLDID-SPTKSENSSSDSQKLPTPKSNNGSR 396

Query: 412 VFYGSRAFF 420
           VFYGSR FF
Sbjct: 397 VFYGSRPFF 405


>AT5G55530.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr5:22494439-22495656 FORWARD
           LENGTH=405
          Length = 405

 Score =  343 bits (881), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 203/429 (47%), Positives = 266/429 (62%), Gaps = 33/429 (7%)

Query: 1   MESPQSVVSPFKGSILGDGEKYKSDVFPRSSSHLSKDFEVNGKEVVVSNPEEFIGVVDVY 60
           M+SPQSVVSPFK   +G+ E   S+   +SS + S     NGK+      ++ +G ++VY
Sbjct: 1   MDSPQSVVSPFK---IGESENENSNSV-QSSGNQSNGINSNGKDSKSCGRQDLVGALEVY 56

Query: 61  IHQARDIHNICIYHRQGVYAKIWLTSNPENTVSAKTINGGGRNPVFNENLRLSVKTVESS 120
           +HQARDIHNICIYH+Q VYAK+ LTS+P+ +VS K INGGGRNPVF++N++L V+ +++S
Sbjct: 57  VHQARDIHNICIYHKQDVYAKLCLTSDPDKSVSTKIINGGGRNPVFDDNVKLDVRVLDTS 116

Query: 121 LKCEIWMLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQLS 180
           LKCEI+M+SRVKNYLEDQLLGF LVP                    TDL+H+PAGFVQLS
Sbjct: 117 LKCEIYMMSRVKNYLEDQLLGFTLVPMSELLFKNGKLEKEFSLSS-TDLYHSPAGFVQLS 175

Query: 181 LAYAGASPDVMAISAMPSELDTNCTEKD---SESLARDLDKIEFPDPKIANEDHMMVSEY 237
           L+Y G+ PDVMAI +MPS +  + T KD   SES+  +LDKIEFPDP +ANE+  MVSEY
Sbjct: 176 LSYYGSYPDVMAIPSMPSSVSIDETTKDPEGSESVPGELDKIEFPDPNVANENEKMVSEY 235

Query: 238 IGIPCE--ESQCSDSLATTTDTEN--SEAGVQLVERFSA-CSVESNGVXXXXXXXXXXXX 292
            GI C   +S+ SDSL T+ D EN  + +   ++++ S   S  +NG             
Sbjct: 236 FGISCSTIDSETSDSLVTS-DAENHVTNSVTSILKQDSPESSNATNGAASPHASAHSATE 294

Query: 293 XXXXXXXXXXXXXXPNQEQISGTKEKSVVDVKDGGESDSSNGVVNNESFPKPVVSVNIEP 352
                         PN E +S    K+            ++G  + E   K V++V +EP
Sbjct: 295 T-------------PNHEHLSVVNSKASSQES----ESEASGETSEEKTVKSVLTVKVEP 337

Query: 353 EPTMVQQDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQGSKSSN-SR 411
           E  +VQQDIVDMYMKSMQQFT+SLAKMKLP+D +           + QKL   KS+N SR
Sbjct: 338 ESKVVQQDIVDMYMKSMQQFTDSLAKMKLPLDID-SPTKSENSSSDSQKLPTPKSNNGSR 396

Query: 412 VFYGSRAFF 420
           VFYGSR FF
Sbjct: 397 VFYGSRPFF 405


>AT1G50570.2 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr1:18726400-18727566 REVERSE
           LENGTH=388
          Length = 388

 Score =  304 bits (778), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 187/425 (44%), Positives = 243/425 (57%), Gaps = 42/425 (9%)

Query: 1   MESPQSVVSPFKGSILGDGEKYKSDVFPRSSSHLSKDFEVNGKEVVVS-NPEEFIGVVDV 59
           MESP S  S   GSI                 HL+   E   K +V+S + + FIGV++V
Sbjct: 1   MESPHSEASIVNGSI-----------------HLNGSGETKTKNIVMSSDSDSFIGVLEV 43

Query: 60  YIHQARDIHNICIYHRQGVYAKIWLTSNPENTVSAKTINGGGRNPVFNENLRLSVKTVES 119
           ++HQARDIHNICIYH+Q VYAK+ LT++PEN++S K INGGG+NPVF++ L+  VK ++ 
Sbjct: 44  FVHQARDIHNICIYHKQDVYAKLCLTNDPENSLSTKIINGGGQNPVFDDTLQFDVKNLDC 103

Query: 120 SLKCEIWMLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQL 179
           SLKCEI+M+SRVKNYLEDQLLGF+LVP                    TDL+H+PAGFV+L
Sbjct: 104 SLKCEIFMMSRVKNYLEDQLLGFSLVP-LSEVIVRNGKLEKEFSLSSTDLYHSPAGFVEL 162

Query: 180 SLAYAGASPDVMAISAMPSELDTNCTEKDSESLARDLDKIEFPDPKIANEDHMMVSEYIG 239
           SL+YAG SPDVM I A+P       T  ++E    + D+ EF DPKI  E++ MVS+Y  
Sbjct: 163 SLSYAGDSPDVMHIPAVP-------TADETELAPIEFDESEFLDPKIVCENNQMVSKYFS 215

Query: 240 IPCEESQCSDSLATTTDTENS--EAGVQLV--ERFSACSVESNGVXXXXXXXXXXXXXXX 295
             C +S    S  T     NS   A V+    E   A SV +NG+               
Sbjct: 216 TTCSDSDDFASSETGFVEVNSILSAVVETAVDEAAPANSVSTNGISSPSTAVSSGSSGTH 275

Query: 296 XXXXXXXXXXXPNQEQISGTKEKSVVDVKDGGESDSSNGVVNNESFPKPVVSVNIEPEPT 355
                       + EQ    + K   D+   G+ D +    + E+  KPV++VNIEPE  
Sbjct: 276 DVSKQSSEGNNSDSEQ----EAKKPTDIIKSGDLDKT----DEEAVVKPVLTVNIEPEQK 327

Query: 356 MVQQDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQGSKSSNSRVFYG 415
           +VQQDIVDMY KS+QQFTESLAKMKLP+D +           +Q      KS++SRVFYG
Sbjct: 328 VVQQDIVDMYTKSLQQFTESLAKMKLPLDIDSPTQSENSSSSQQTP----KSASSRVFYG 383

Query: 416 SRAFF 420
           SRAFF
Sbjct: 384 SRAFF 388


>AT1G50570.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr1:18726400-18727566 REVERSE
           LENGTH=388
          Length = 388

 Score =  304 bits (778), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 187/425 (44%), Positives = 243/425 (57%), Gaps = 42/425 (9%)

Query: 1   MESPQSVVSPFKGSILGDGEKYKSDVFPRSSSHLSKDFEVNGKEVVVS-NPEEFIGVVDV 59
           MESP S  S   GSI                 HL+   E   K +V+S + + FIGV++V
Sbjct: 1   MESPHSEASIVNGSI-----------------HLNGSGETKTKNIVMSSDSDSFIGVLEV 43

Query: 60  YIHQARDIHNICIYHRQGVYAKIWLTSNPENTVSAKTINGGGRNPVFNENLRLSVKTVES 119
           ++HQARDIHNICIYH+Q VYAK+ LT++PEN++S K INGGG+NPVF++ L+  VK ++ 
Sbjct: 44  FVHQARDIHNICIYHKQDVYAKLCLTNDPENSLSTKIINGGGQNPVFDDTLQFDVKNLDC 103

Query: 120 SLKCEIWMLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDLFHTPAGFVQL 179
           SLKCEI+M+SRVKNYLEDQLLGF+LVP                    TDL+H+PAGFV+L
Sbjct: 104 SLKCEIFMMSRVKNYLEDQLLGFSLVP-LSEVIVRNGKLEKEFSLSSTDLYHSPAGFVEL 162

Query: 180 SLAYAGASPDVMAISAMPSELDTNCTEKDSESLARDLDKIEFPDPKIANEDHMMVSEYIG 239
           SL+YAG SPDVM I A+P       T  ++E    + D+ EF DPKI  E++ MVS+Y  
Sbjct: 163 SLSYAGDSPDVMHIPAVP-------TADETELAPIEFDESEFLDPKIVCENNQMVSKYFS 215

Query: 240 IPCEESQCSDSLATTTDTENS--EAGVQLV--ERFSACSVESNGVXXXXXXXXXXXXXXX 295
             C +S    S  T     NS   A V+    E   A SV +NG+               
Sbjct: 216 TTCSDSDDFASSETGFVEVNSILSAVVETAVDEAAPANSVSTNGISSPSTAVSSGSSGTH 275

Query: 296 XXXXXXXXXXXPNQEQISGTKEKSVVDVKDGGESDSSNGVVNNESFPKPVVSVNIEPEPT 355
                       + EQ    + K   D+   G+ D +    + E+  KPV++VNIEPE  
Sbjct: 276 DVSKQSSEGNNSDSEQ----EAKKPTDIIKSGDLDKT----DEEAVVKPVLTVNIEPEQK 327

Query: 356 MVQQDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQGSKSSNSRVFYG 415
           +VQQDIVDMY KS+QQFTESLAKMKLP+D +           +Q      KS++SRVFYG
Sbjct: 328 VVQQDIVDMYTKSLQQFTESLAKMKLPLDIDSPTQSENSSSSQQTP----KSASSRVFYG 383

Query: 416 SRAFF 420
           SRAFF
Sbjct: 384 SRAFF 388


>AT5G12300.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr5:3978508-3979632 REVERSE
           LENGTH=374
          Length = 374

 Score =  155 bits (391), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 84/197 (42%), Positives = 117/197 (59%), Gaps = 19/197 (9%)

Query: 53  FIGVVDVYIHQARDIHNICIYHRQGVYAKIWLTSNPENTVSAKTINGGGRNPVFNENLRL 112
           F GV+ VY+H AR+I+NICIY  Q VYAK  LT NP++T+S + I+  G+NP FN+ L +
Sbjct: 19  FSGVLQVYVHNARNINNICIYDNQDVYAKFSLTYNPDDTISTRIIHRAGKNPEFNQKLMI 78

Query: 113 SVKTVESS---LKCEIWMLSRVKNYLEDQLLGFALVPXXXXXXXXXXXXXXXXXXXXTDL 169
            V  +++    LKCEIWM+SR ++Y+EDQLLGFALVP                    TDL
Sbjct: 79  DVTQIDAHAAVLKCEIWMMSRARHYMEDQLLGFALVP--ISDIIGQDSVTQDYSLSSTDL 136

Query: 170 FHTPAGFVQLSLAYAG------ASPDV--MAISAMPSELDTNCTEKDSESLARDLDKIEF 221
           FH+PAG V+L+L+         ++P +   +IS+    LD   +E        D  +IEF
Sbjct: 137 FHSPAGTVKLTLSIVNPSSTSSSNPKINTTSISSEVVLLDPQVSE------TVDYTRIEF 190

Query: 222 PDPKIANEDHMMVSEYI 238
           PD  +ANE+  MV+EY 
Sbjct: 191 PDINVANENKQMVTEYF 207



 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 39/80 (48%), Gaps = 14/80 (17%)

Query: 355 TMVQQDIVDMYMKSMQQFTESLAKMKLPMDFEXXXXXXXXXXXEQQKLQG---------- 404
           T +Q+ I +MYM+SMQQFTESLAKMKLPMD                              
Sbjct: 295 TTMQKQIAEMYMRSMQQFTESLAKMKLPMDLHNKPHEEDHSNNNNNTATQIQNQNNNANN 354

Query: 405 ----SKSSNSRVFYGSRAFF 420
                K   SRVFYGSRAFF
Sbjct: 355 NGMEKKKEGSRVFYGSRAFF 374