Miyakogusa Predicted Gene
- Lj0g3v0077939.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0077939.1 tr|Q8GU51|Q8GU51_ORYSJ MRP-like ABC transporter
(Fragment) OS=Oryza sativa subsp. japonica GN=mrp1
P,71.67,2e-19,ABC_TM1F,ABC transporter, integral membrane type 1;
PREDICTED: SIMILAR TO ATP-BINDING CASSETTE C5 SP,CUFF.3964.1
(72 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30400.2 | Symbols: ATMRP1, EST1, ABCC1 | multidrug resistanc... 108 9e-25
AT1G30400.1 | Symbols: ATMRP1, EST1, ABCC1, ATABCC1, MRP1 | mult... 108 9e-25
AT2G34660.2 | Symbols: MRP2, ABCC2, AtABCC2 | multidrug resistan... 107 2e-24
AT2G34660.1 | Symbols: ATMRP2, EST4, MRP2, ABCC2, AtABCC2 | mult... 107 2e-24
AT1G30410.1 | Symbols: ATMRP13, MRP13, ABCC12 | multidrug resist... 100 2e-22
AT1G30420.1 | Symbols: ATMRP12, MRP12, ABCC11 | multidrug resist... 97 2e-21
AT3G21250.2 | Symbols: MRP6, ABCC8 | multidrug resistance-associ... 48 1e-06
AT3G21250.1 | Symbols: ATMRP6, MRP6, ABCC8 | multidrug resistanc... 48 1e-06
>AT1G30400.2 | Symbols: ATMRP1, EST1, ABCC1 | multidrug
resistance-associated protein 1 | chr1:10728139-10737697
FORWARD LENGTH=1622
Length = 1622
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 58/62 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
L+KEGL++TDKR+GLMNE+LAAMDTVKCYAWE SFQS++Q++RD+ELSWFRKAQL+ A N
Sbjct: 466 LTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFN 525
Query: 62 LI 63
+
Sbjct: 526 MF 527
>AT1G30400.1 | Symbols: ATMRP1, EST1, ABCC1, ATABCC1, MRP1 |
multidrug resistance-associated protein 1 |
chr1:10728139-10737697 FORWARD LENGTH=1622
Length = 1622
Score = 108 bits (269), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 58/62 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
L+KEGL++TDKR+GLMNE+LAAMDTVKCYAWE SFQS++Q++RD+ELSWFRKAQL+ A N
Sbjct: 466 LTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFN 525
Query: 62 LI 63
+
Sbjct: 526 MF 527
>AT2G34660.2 | Symbols: MRP2, ABCC2, AtABCC2 | multidrug
resistance-associated protein 2 | chr2:14603267-14612387
FORWARD LENGTH=1623
Length = 1623
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 58/62 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
L+KEGL++TDKR+GLMNE+LAAMDTVKCYAWE SFQS++Q++RD+ELSWFRK+QL+ A N
Sbjct: 466 LTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKSQLLGALN 525
Query: 62 LI 63
+
Sbjct: 526 MF 527
>AT2G34660.1 | Symbols: ATMRP2, EST4, MRP2, ABCC2, AtABCC2 |
multidrug resistance-associated protein 2 |
chr2:14603267-14612387 FORWARD LENGTH=1623
Length = 1623
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 58/62 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
L+KEGL++TDKR+GLMNE+LAAMDTVKCYAWE SFQS++Q++RD+ELSWFRK+QL+ A N
Sbjct: 466 LTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKSQLLGALN 525
Query: 62 LI 63
+
Sbjct: 526 MF 527
>AT1G30410.1 | Symbols: ATMRP13, MRP13, ABCC12 | multidrug
resistance-associated protein 13 |
chr1:10739357-10747017 FORWARD LENGTH=1468
Length = 1468
Score = 100 bits (250), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 54/60 (90%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
L+KEGL+ TDKRVG+ NEIL++MDTVKCYAWE SF+SRIQ IR+EELSWFRKAQL+ A N
Sbjct: 440 LTKEGLQWTDKRVGITNEILSSMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFN 499
>AT1G30420.1 | Symbols: ATMRP12, MRP12, ABCC11 | multidrug
resistance-associated protein 12 |
chr1:10748816-10756316 FORWARD LENGTH=1495
Length = 1495
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 53/60 (88%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
L+KEGL+ TDKRVG++ EILA+MD VKCYAWE SF+SRIQ IR+EELSWFRKAQL+ A N
Sbjct: 467 LTKEGLQWTDKRVGIIYEILASMDIVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFN 526
>AT3G21250.2 | Symbols: MRP6, ABCC8 | multidrug
resistance-associated protein 6 | chr3:7457668-7463261
REVERSE LENGTH=1464
Length = 1464
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 11 DKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYA 59
DKR+ +EIL +M +K +WE F+ +I+S RD+E +W KAQL A
Sbjct: 456 DKRLRSTSEILNSMKVIKLQSWEDEFKKKIESCRDDEFTWLAKAQLTKA 504
>AT3G21250.1 | Symbols: ATMRP6, MRP6, ABCC8 | multidrug
resistance-associated protein 6 | chr3:7457668-7463261
REVERSE LENGTH=1453
Length = 1453
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 11 DKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYA 59
DKR+ +EIL +M +K +WE F+ +I+S RD+E +W KAQL A
Sbjct: 456 DKRLRSTSEILNSMKVIKLQSWEDEFKKKIESCRDDEFTWLAKAQLTKA 504