Miyakogusa Predicted Gene

Lj0g3v0077639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0077639.1 Non Chatacterized Hit- tr|I1GR97|I1GR97_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,52.48,2e-18,
,CUFF.3950.1
         (100 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02480.1 | Symbols:  | AAA-type ATPase family protein | chr4:...   152   6e-38
AT1G02890.2 | Symbols:  | AAA-type ATPase family protein | chr1:...   144   8e-36
AT1G02890.1 | Symbols:  | AAA-type ATPase family protein | chr1:...   144   9e-36
AT4G24860.1 | Symbols:  | P-loop containing nucleoside triphosph...    67   2e-12
AT1G62130.1 | Symbols:  | AAA-type ATPase family protein | chr1:...    49   6e-07

>AT4G02480.1 | Symbols:  | AAA-type ATPase family protein |
           chr4:1082082-1088680 REVERSE LENGTH=1265
          Length = 1265

 Score =  152 bits (383), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 83/101 (82%), Gaps = 1/101 (0%)

Query: 1   MKDAEKSIVGNGDPYS-FKSKLEKLPDNVVVIGSHTQSDSRKEKSHPGGLLFTKFGSNQT 59
           +KD EKS+VGN D Y+  KSKLE LP+N+VVI S TQ DSRKEKSHPGG LFTKFG NQT
Sbjct: 724 LKDIEKSLVGNSDVYATLKSKLETLPENIVVIASQTQLDSRKEKSHPGGFLFTKFGGNQT 783

Query: 60  ALLDLAFPDSFGRLHDRGKDVPKPNKTLTKLFPNKVTIHMP 100
           ALLDLAFPD+FG+LHDR K+ PK  K +T+LFPNK+ I +P
Sbjct: 784 ALLDLAFPDNFGKLHDRSKETPKSMKQITRLFPNKIAIQLP 824


>AT1G02890.2 | Symbols:  | AAA-type ATPase family protein |
           chr1:645372-651797 REVERSE LENGTH=1218
          Length = 1218

 Score =  144 bits (364), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 71/102 (69%), Positives = 83/102 (81%), Gaps = 2/102 (1%)

Query: 1   MKDAEKSIVGNGDPY-SFKSKLEKLPDNVVVIGSHTQSDSRKEKSHPGGLLFTKFGSNQT 59
           +KD EKS+ GN D Y + KSKLE LP+N+VVI S TQ D+RKEKSHPGG LFTKFGSNQT
Sbjct: 704 LKDIEKSVSGNTDVYITLKSKLENLPENIVVIASQTQLDNRKEKSHPGGFLFTKFGSNQT 763

Query: 60  ALLDLAFPDSF-GRLHDRGKDVPKPNKTLTKLFPNKVTIHMP 100
           ALLDLAFPD+F GRL DR  ++PK  K +T+LFPNKVTI +P
Sbjct: 764 ALLDLAFPDTFGGRLQDRNTEMPKAVKQITRLFPNKVTIQLP 805


>AT1G02890.1 | Symbols:  | AAA-type ATPase family protein |
           chr1:645372-651797 REVERSE LENGTH=1246
          Length = 1246

 Score =  144 bits (364), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 71/102 (69%), Positives = 83/102 (81%), Gaps = 2/102 (1%)

Query: 1   MKDAEKSIVGNGDPY-SFKSKLEKLPDNVVVIGSHTQSDSRKEKSHPGGLLFTKFGSNQT 59
           +KD EKS+ GN D Y + KSKLE LP+N+VVI S TQ D+RKEKSHPGG LFTKFGSNQT
Sbjct: 704 LKDIEKSVSGNTDVYITLKSKLENLPENIVVIASQTQLDNRKEKSHPGGFLFTKFGSNQT 763

Query: 60  ALLDLAFPDSF-GRLHDRGKDVPKPNKTLTKLFPNKVTIHMP 100
           ALLDLAFPD+F GRL DR  ++PK  K +T+LFPNKVTI +P
Sbjct: 764 ALLDLAFPDTFGGRLQDRNTEMPKAVKQITRLFPNKVTIQLP 805


>AT4G24860.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr4:12801580-12808190
           REVERSE LENGTH=1122
          Length = 1122

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 26/101 (25%)

Query: 1   MKDAEKSIVGNGDPYS-FKSKLEKLPDNVVVIGSHTQSDSRKEKSHPGGLLFTKFGSNQT 59
           +KDAEKS+ GN D YS F+ +LE LP+NV+VI S T SD  K K                
Sbjct: 607 LKDAEKSVAGNFDLYSAFQIRLEYLPENVIVICSQTHSDHLKVKD--------------- 651

Query: 60  ALLDLAFPDSFGRLHDRGKDVPKPNKTLTKLFPNKVTIHMP 100
                      GR   +GK+VP   + L +LF NK+TI MP
Sbjct: 652 ----------IGRQKKQGKEVPHATELLAELFENKITIQMP 682


>AT1G62130.1 | Symbols:  | AAA-type ATPase family protein |
           chr1:22962365-22968920 REVERSE LENGTH=1043
          Length = 1043

 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 45/101 (44%), Gaps = 40/101 (39%)

Query: 1   MKDAEKSIVGNGDPYS-FKSKLEKLPDNVVVIGSHTQSDSRKEKSHPGGLLFTKFGSNQT 59
           +KDAEK  VGN    S FKSKLE + DN++VI S T SD+ KEK                
Sbjct: 563 LKDAEKYFVGNSHFCSAFKSKLEVISDNLIVICSQTHSDNPKEK---------------- 606

Query: 60  ALLDLAFPDSFGRLHDRGKDVPKPNKTLTKLFPNKVTIHMP 100
                      GRL D              LF NKVTI+MP
Sbjct: 607 ---------GIGRLTD--------------LFVNKVTIYMP 624