Miyakogusa Predicted Gene
- Lj0g3v0077609.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0077609.1 Non Chatacterized Hit- tr|F6I6N4|F6I6N4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.5,7e-19,PPR_2,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR,Pentatricopepti,CUFF.3938.1
(127 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-28
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 95 2e-20
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 89 8e-19
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-18
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 86 8e-18
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-18
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-17
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-17
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-17
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-17
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-17
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-17
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-17
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-17
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-17
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-17
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 82 9e-17
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-16
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-16
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-16
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-16
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-16
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-16
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-16
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-16
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-16
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-16
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 79 1e-15
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-15
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-15
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-15
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-15
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-15
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-15
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-15
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-15
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-15
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-15
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-15
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-15
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-15
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-15
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 75 8e-15
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-15
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-14
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-14
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-14
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-14
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 74 2e-14
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-14
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-14
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-14
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-14
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-14
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-14
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 73 4e-14
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-14
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-14
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-14
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-14
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-14
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-14
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-14
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-14
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 72 7e-14
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-14
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 72 1e-13
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-13
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-13
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 72 1e-13
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 72 1e-13
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-13
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 71 1e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 71 2e-13
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-13
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-13
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-13
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-13
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-13
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-13
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 70 3e-13
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-13
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-13
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-13
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-13
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 70 5e-13
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-13
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-13
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-13
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 69 7e-13
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 69 7e-13
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 69 7e-13
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-13
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-13
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-12
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-12
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 68 1e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-12
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-12
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 67 2e-12
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-12
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-12
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-12
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 67 4e-12
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-12
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-12
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-12
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-12
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-12
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-12
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-12
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 66 6e-12
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-12
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-12
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-12
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-12
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-12
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-12
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-11
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 65 2e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-11
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 64 2e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 64 2e-11
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 64 2e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-11
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 64 2e-11
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-11
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-11
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 63 5e-11
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-11
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 63 5e-11
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-11
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-11
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-11
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-11
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-11
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 59 6e-10
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-10
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-10
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-09
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-09
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-09
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-09
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-09
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-09
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 55 1e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 54 4e-08
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-07
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 2e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 4e-06
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 47 4e-06
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 120 bits (300), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 85/126 (67%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S ++ + ST+L L A D G+ +S H CI+IGL L+++TALI MY KTG
Sbjct: 218 MRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGG 277
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R+IFD + KDVV WNC+I YA+ GL+ E ++LL++M+ + MK NSSTFVGLLS+
Sbjct: 278 ISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS 337
Query: 121 CPASES 126
C SE+
Sbjct: 338 CAYSEA 343
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + + ++ST + LL + + VG+++ + ++ + TAL+DMY K GL
Sbjct: 319 MKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGL 378
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG--MKTNSSTFVGLL 118
+ +IF+ + DKDV W +I Y +GL EA+ L KM + ++ N TF+ +L
Sbjct: 379 LEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVL 438
Query: 119 SAC 121
+AC
Sbjct: 439 NAC 441
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 71/121 (58%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC L S T++ +LPA VGK +HGY ++ G S +N+ TAL+DMY K G
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 286
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R++FD +++++VV WN +I Y +N EA+ + QKM +G+K + +G L A
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346
Query: 121 C 121
C
Sbjct: 347 C 347
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL GD VGK +HG ++ G S L +T L +MY K V+ RK+FD + ++D
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+V WN ++ Y++NG+ AL +++ M + +K + T V +L A A
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
K +HG ++ L ++ V TAL+DMY K G + R IFD + ++ V WN +I Y
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+G AL L ++M+ +K N TF+ ++SAC S
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 66/120 (55%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + +V+ L A D G+ G+ +H +++GL +++V+ +LI MY K
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE 387
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V +F L + +V WN +I +A+NG +AL +MR + +K ++ T+V +++A
Sbjct: 388 VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 89.0 bits (219), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 70/119 (58%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
L ++ T++ +LP+ GK +H Y I+ L++ + V +AL+DMY K G + R
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
K+FD + K+V+ WN +I Y +G EA+ LL+ M +QG+K N TF+ + +AC S
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHS 631
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTG 59
M G+ T+ +LPA GK LH Y ++ G L + V +AL+DMY
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLL 118
V GR++FD + D+ + LWN +I Y++N EAL L M G+ NS+T G++
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 119 SAC 121
AC
Sbjct: 413 PAC 415
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+GL+A+++T+ ++PA +G F +++HG+ ++ GL V L+DMY + G +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR-----------IQGMKTNSS 112
+IF + D+D+V WN +I Y + +AL LL KM+ +K NS
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 113 TFVGLLSACPA 123
T + +L +C A
Sbjct: 519 TLMTILPSCAA 529
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 26 FVVGKSLHGYCIQIGLSSHLN--VLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
++GK +H Y ++ G LN ++ L+ MY K G + + + S +D+V WN ++
Sbjct: 218 LMMGKQVHAYGLRKG---ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +N + EAL L++M ++G++ + T +L AC
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
LL A D + +GK +H + + G + V L+++Y K G K+FD + ++
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ V WN LI + AL + M + ++ +S T V +++AC
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 209
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 66/123 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ S T++ +L A D GK LH + +++G HL TAL+DMY K G
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ RK FD L ++DV LW LI Y +N EAL L ++M+ G+ N T +L A
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 432
Query: 121 CPA 123
C +
Sbjct: 433 CSS 435
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+I + T+ +L A +GK +HG+ I+ G + + +AL MY K G
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ G +F +KDVV WN +I + NG EAL L ++M +GM+ + TFV ++SA
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Query: 121 C 121
C
Sbjct: 534 C 534
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
ST+L L N V G+++HG I+ G S+ + L++ Y K G + IF++
Sbjct: 15 STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNA 74
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEA---LYLLQKMRIQGMKTNSSTFVGLLSA 120
++ KDVV WN LI Y++NG + + + L ++MR Q + N+ T G+ A
Sbjct: 75 IICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+ +H I+ GL + + AL+ MY K ++ K+FDS D++ + W+ ++ Y+
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+NG EA+ L +M G+K + T VG+L+AC
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
++ +A T+ + A + VG+ H +++ + V T+L+ MY K GLV G
Sbjct: 114 ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL 173
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALY---LLQKMRIQGMKTNSSTFVGLLSACP 122
K+F + +++ W+ ++ YA G V EA+ L + + +G ++ F +LS+
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLA 232
Query: 123 AS 124
A+
Sbjct: 233 AT 234
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 85.5 bits (210), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ L+ AA T N +GK + YCI+ S + + + ++DMY K G + +K+FDS
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
V+KD++LWN L+ YA +GL GEAL L M+++G+ N
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPN 475
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + TV L A+ + G GK H I G+ + T+L++ Y K GL
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +FD + +KDVV WN +I Y + GLV +A+Y+ Q MR++ +K + T L+SA
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 121 CPASESI 127
+E++
Sbjct: 385 AARTENL 391
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +HGY ++ GL + V ++L DMY K G++ K+FD + D++ V WN L+ Y +
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
NG EA+ L MR QG++ T LSA
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSA 283
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQ-IGLSSHLNVLTALIDMYVKTG 59
M SGL +A ++ + L A + +G+++HGY I+ + SS +++ T+L+DMY K G
Sbjct: 537 MQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCG 596
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
++ K+F S + ++ L N +I YA G + EA+ L + + G+K ++ T +LS
Sbjct: 597 DINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLS 656
Query: 120 AC 121
AC
Sbjct: 657 AC 658
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 85.5 bits (210), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ + T+L L+P +G+SLHG C++ GL S + VL + I MY+K G
Sbjct: 147 MKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGS 206
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V GR++FD + K ++ WN +I Y++NGL + L L ++M+ G+ + T V +LS+
Sbjct: 207 VEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSS 266
Query: 121 C 121
C
Sbjct: 267 C 267
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG A + +L + V G+ LH + + G + VLTALI MY K GL
Sbjct: 44 MLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGL 103
Query: 61 VHWGRKIFDSLVDKD--VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
V RK+F+ V +N LI Y N V +A Y+ ++M+ G+ +S T +GL+
Sbjct: 104 VADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLV 163
Query: 119 SACPASE 125
C E
Sbjct: 164 PLCTVPE 170
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ T++ +L + G +G + G ++ V A I MY + G +
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAK 310
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
R +FD + K +V W +IG Y +G+ L L M +G++ + + FV +LSAC
Sbjct: 311 ARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSH 370
Query: 124 S 124
S
Sbjct: 371 S 371
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 70/127 (55%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M ++ + T+ +L + G+ GKS+HGY I+ G+ T+ IDMY + G
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R +FD + +++V+ W+ +I + NGL EAL KM+ Q + NS TFV LLSA
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 121 CPASESI 127
C S ++
Sbjct: 423 CSHSGNV 429
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTA-LIDMYVKTGLVH 62
+GL A T++ L+ A G+ VGK +HG I+ + L A +IDMYVK L+
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLD 263
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACP 122
RK+F++ VD++VV+W LI +A+ EA L ++M + + N T +L +C
Sbjct: 264 NARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCS 323
Query: 123 A 123
+
Sbjct: 324 S 324
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
+HG ++ GL V +L++MY + G + +K+FD + ++ VLW L+ Y +
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
E L MR G+ ++ T + L+ AC
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKAC 220
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 65/106 (61%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL + + +G +H Y ++ GL+ + LIDMY K G + R+IFDS+ ++D
Sbjct: 479 LLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRD 538
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV W+ LI YA++G EAL L ++M+ G++ N TFVG+L+AC
Sbjct: 539 VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTAC 584
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +HG CI+ L+ + +L DMY + G ++ R++FD + D WN +I A
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
NG EA+ + +MR G ++ + LL A
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
++ A + + +GK LH I++ SSHL ALI MYV+ + ++F + KD
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGM-KTNSSTFVGLLSACPA 123
++ W+ +I +++ G EAL L++M G+ N F L AC +
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSS 282
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 57/116 (49%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T + L+ A + + G+ +H + + + ++ MY K G + R++FD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
++++V + +I Y++NG EA+ L KM + + + F ++ AC +S +
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +HG CI+ G S TAL+DMYVK G + G +FD ++++DVV W +I + +
Sbjct: 462 GKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQ 521
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
NG V EA KM G++ N TF+GLLSAC S
Sbjct: 522 NGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHS 557
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L G F G+S+ + I+ G+S ++ + +I MYV L+ K+FD + ++++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSAC 121
V W ++ Y +G +A+ L ++M + N + +L AC
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKAC 117
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 83.6 bits (205), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/109 (39%), Positives = 62/109 (56%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
L A TG GK +H Y I+ G L+DMY K+G +H RKIFD L +D
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD 327
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
VV WN L+ YA++G EA++ ++MR G++ N +F+ +L+AC S
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
Score = 73.2 bits (178), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 57/96 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G LHG+C++ G S+++V +AL+D+Y + GL+ + +FD+L ++ V WN LI +AR
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+AL L Q M G + + ++ L AC ++
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 46/98 (46%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
+ G+ +H + +Q + + L++MY K G + RK+F+ + +D V W LI
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
Y+++ +AL +M G N T ++ A A
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+ A+ + G GK LH Y ++ G S +VL +L+DMY K G + +K+F+ + D
Sbjct: 534 FISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPD 593
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV WN L+ A NG + AL ++MR++ + +S TF+ LLSAC
Sbjct: 594 VVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSAC 639
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ + T + LL A+ G GK++H I G+ ++ + T+L+D Y +
Sbjct: 216 MVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK 274
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++ +S ++DV LW ++ + RN EA+ +MR G++ N+ T+ +LS
Sbjct: 275 MEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSL 334
Query: 121 CPASESI 127
C A S+
Sbjct: 335 CSAVRSL 341
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G +H I+ GL +L++ L+ +Y+KT + RK+FD + + V W +I +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ AL L ++M G N TF ++ +C
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC 134
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH-WGRKIFDSLVDKDVVLWNCLIGNYA 87
GK +H I++G +V AL+DMY+K ++F ++V +VV W LI
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G V + LL +M + ++ N T G+L AC
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 83.2 bits (204), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
++ S + LL A D GK +HG+ I+ + VLT+LIDMY+K GL W R
Sbjct: 364 MVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWAR 423
Query: 66 KIFDSLV--DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+IFD KD V WN +I Y ++G A+ + + +R + ++ + +TF +LSAC
Sbjct: 424 RIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSAC 481
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T LL + G+ V G+ LH ++ G + TAL+ MY+K V K+ D +
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ + N + NG +A + R+ G NS T +L C
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVD-KDVVLWNCLI 83
N G+ LHG ++ V TALIDMY K +F L D ++++ WN +I
Sbjct: 246 NLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVI 305
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
NG A+ L +K+ +G+K +S+T+ L+S
Sbjct: 306 SGMMINGQHETAVELFEKLDSEGLKPDSATWNSLIS 341
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGL--SSHLNVLTALIDMYVKTGLVHWGRKIFD 69
TV L A G+ VG SLH Y +++G SS ++V TAL+D Y K G R IFD
Sbjct: 445 TVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFD 504
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ +K+ + W+ +IG Y + G +L L ++M + K N STF +LSAC
Sbjct: 505 TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSAC 556
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ +L G N +G+S+HG I++G+ NV AL+ MY K + +F+
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEME 403
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+KD+V WN +I +++NG + EAL+L +M + + N T L SAC +
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACAS 455
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK HG ++ G+ ++T+L+DMYVK G + R++F+ D+V+W +I Y
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTH 320
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
NG V EAL L QKM+ +K N T +LS C E++
Sbjct: 321 NGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNV-LTALIDMYVKTGLVHWGRKIFDSLVDKD 75
L A + + GK +H C + + S NV LT L+DMY K G + K+F+ + ++
Sbjct: 149 LKACTELQDLDNGKKIH--CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRN 206
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV W +I Y +N L E L L +MR + N T+ L+ AC
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMAC 252
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 74/119 (62%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +SG A ST++ LL + F G+ +HGY +++GL S++++ +LI MY + G
Sbjct: 80 MQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGK 139
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ RK+F+S+ D+++ WN ++ +Y + G V +A+ LL +M I G+K + T+ LLS
Sbjct: 140 LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLS 198
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 70/116 (60%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+GL S S++ LL A + G+ +GK++HGY ++ L + V T LIDMY+KTG + +
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
R +FD + K++V WN L+ + L+ +A L+ +M +G+K ++ T+ L S
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLAS 334
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ +A+T+ LL G GK +HG+C++ L V TAL+DMY K+G
Sbjct: 387 MQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGD 446
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +IF + +K + WNC++ YA G E + M GM+ ++ TF +LS
Sbjct: 447 LQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 506
Query: 121 CPAS 124
C S
Sbjct: 507 CKNS 510
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 28 VGKSLHGYCIQIGL-SSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
+G ++HG I+ GL +S V++A + Y + + + K+FD + +D + WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
R+G +A+ L ++M+ G K ST V LL C E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKE 103
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 82.4 bits (202), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 64/106 (60%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
++ AAG+ + +G+ H ++ GL + + AL+DMY K G K FDS +D
Sbjct: 561 MVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRD 620
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV WN +I +YA +G +AL +L+KM +G++ N TFVG+LSAC
Sbjct: 621 VVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +H Y I+ L + V +LIDMY K + RK+FD DVVL+N +I Y+R
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 89 NGL---VGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
G + EAL + + MR + ++ + TFV LL A + S+
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL 470
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H + ++ GL +++ LID YVK G V K+F+ + +K+++ W L+ Y +
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
N L EA+ L M G+K + +L++C +
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T + LL A+ + + K +HG + GL+ + +ALID+Y + R +FD +
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
KD+V+WN + Y + EAL L ++++ + + TF +++A
Sbjct: 516 KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTA 564
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 82.4 bits (202), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 63/106 (59%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
++PA +GK LHGY ++ G S++ + +AL+DMY K G + RKIFD + D
Sbjct: 349 VIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLD 408
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V W +I +A +G EA+ L ++M+ QG+K N FV +L+AC
Sbjct: 409 EVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + L + T+ +LP + + + GK +HGY I+ G+ S + + ++L+DMY K+
Sbjct: 233 MGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR 292
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++F L +D + WN L+ Y +NG EAL L ++M +K + F ++ A
Sbjct: 293 IEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPA 352
Query: 121 C 121
C
Sbjct: 353 C 353
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 82.4 bits (202), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + ++ +L A T + + GKSLHGY +++G+ S ++ ALIDMYVK G
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ IF + K ++ WN +I Y +G AL L +M+ G + TF+ L+SA
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 121 CPAS 124
C S
Sbjct: 688 CNHS 691
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 5 GLIASASTVLILLPAAGDTGNF--VVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
G+ A ++ I++ GNF GK +HG+ ++ L + + TALIDMY K GL
Sbjct: 163 GVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 63 WGRKIFDSLVDK-DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F + DK +VVLWN +I + +G+ +L L + +K S++F G L AC
Sbjct: 223 DAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGAC 282
Query: 122 PASES 126
SE+
Sbjct: 283 SQSEN 287
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L A + N G+ +H +++GL + V T+L+ MY K G+V +F +VDK +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+WN ++ YA N AL L MR + + +S T ++S C
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC 383
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +HG I+ GL ++ V ++LID+Y K GL K+F S+ +++V WN +I Y+R
Sbjct: 495 GLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSR 554
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
N L ++ L M QG+ +S + +L A ++ S+
Sbjct: 555 NNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
S T LL A N GK++HG + +G + T+L++MYVK G + + ++F
Sbjct: 59 SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 118
Query: 69 D-------SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNS 111
D + +DV +WN +I Y + E + ++M + G++ ++
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDA 168
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G + GKS+H + + S + +AL+ +Y K G +F S+ +KD+V W LI
Sbjct: 387 GLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLI 446
Query: 84 GNYARNGLVGEALYLLQKMR--IQGMKTNSSTFVGLLSACPASESI 127
+NG EAL + M+ +K +S + +AC E++
Sbjct: 447 SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEAL 492
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 82.0 bits (201), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV +LPA F G+ +HGY ++ G S +V +L+DMY K G + +FD +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
KD+V W +I Y +G EA+ L +MR G++ + +FV LL AC S
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Score = 69.7 bits (169), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 55/99 (55%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ LHG+ ++ G +V +L+ Y+K V RK+FD + ++DV+ WN +I Y
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
NGL + L + +M + G++ + +T V + + C S I
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLI 312
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 61/121 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ +T++ + D+ +G+++H ++ S L+DMY K G
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +F + D+ VV + +I YAR GL GEA+ L ++M +G+ + T +L+
Sbjct: 347 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 121 C 121
C
Sbjct: 407 C 407
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H + + L + V AL+DMY K G + +F + KD++ WN +IG Y++
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 89 NGLVGEALYLLQ-KMRIQGMKTNSSTFVGLLSACPA 123
N EAL L + + + T +L AC +
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL A+GD G+ +G+S+HGY + GL ++ V T+L+DMY K G + ++F ++ K
Sbjct: 223 LLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKT 282
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V W LI +A+NGL +A + +M+ G + + T VG+L AC
Sbjct: 283 AVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVAC 328
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +L A G+ G+ +H Y ++ + + TAL+DMY K G + R+IF+ +
Sbjct: 320 TLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA-TALMDMYSKCGALSSSREIFEHV 378
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
KD+V WN +I Y +G E + L KM ++ + +TF LLSA S
Sbjct: 379 GRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHS 431
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 66/121 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G A ++ +LPA GDT +GK +HGY + L +L + ALIDMY K G
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R +F+++ +DVV W +I Y +G +A+ L K++ G+ +S FV L+A
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 121 C 121
C
Sbjct: 420 C 420
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC + T +L A +G V+G+ +HG ++GLSS L V L+ MY K G
Sbjct: 131 MCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGF 190
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R + D + +DVV WN L+ YA+N +AL + ++M + ++ T LL A
Sbjct: 191 LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 250
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 80.1 bits (196), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ T++ LL A G +GK +H Y I++GL+ +L+ L+D+Y + G V
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR-IQGMKTNSSTFVGLLSAC 121
+ +FD +VDK+ V W LI A NG EA+ L + M +G+ TFVG+L AC
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC 201
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+++H I+ G S + V +L+ +Y G V K+FD + +KD+V WN +I +A
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EAL L +M +G+K + T V LLSAC
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSAC 99
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + L+ T LL A G S+H + G SS + ++L+++Y K GL
Sbjct: 37 MLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGL 96
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ RK+F+ + ++DVV W +IG Y+R G+VGEA L+ +MR QG+K T + +LS
Sbjct: 97 LAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS 155
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG S+ + ++ + G+F +G S+HGY ++ G + L +LI MY K G
Sbjct: 337 MLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGH 396
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKT-NSSTFVGLLS 119
+ IF+ + ++D+V WN +I YA+N + +AL L ++M+ + ++ +S T V LL
Sbjct: 397 LDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQ 456
Query: 120 ACPAS 124
AC ++
Sbjct: 457 ACSSA 461
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ LL A G VGK +H I+ + V TAL+DMY K G + ++ FDS+
Sbjct: 450 TVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI 509
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
KDVV W LI Y +G AL + + GM+ N F+ +LS+C
Sbjct: 510 SWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSC 559
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
+ LH + + G + V+ +++++Y K V + +FD + +D+V WN +I YA
Sbjct: 164 QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
G + E L LL +MR G++ + TF LS
Sbjct: 224 GNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL T L +G + +G+ LH ++ G +++ TALI MY+K G
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ +++ +KDVV W +I R G +AL + +M G +S ++++C
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASC 356
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S + S T ++ + D +GK +H + + G V AL+ Y K G
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R++FD + +K +V WN L+ + +NGL EA+ + +MR G + +S+TFV LLSA
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
Query: 121 CPASESI 127
C + ++
Sbjct: 218 CAQTGAV 224
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG ++T + LL A TG +G +H Y I GL ++ + TALI++Y + G
Sbjct: 199 MRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGD 258
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLS 119
V R++FD + + +V W +I Y +G +A+ L KM G N+ TFV +LS
Sbjct: 259 VGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLS 318
Query: 120 AC 121
AC
Sbjct: 319 AC 320
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 79.3 bits (194), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +SGL T + A VG+S+H ++GL +++ +LI MY K G
Sbjct: 123 MKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQ 182
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V + RK+FD + ++D V WN +I Y+ G +A+ L +KM +G + + T V +L A
Sbjct: 183 VGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGA 242
Query: 121 C 121
C
Sbjct: 243 C 243
Score = 73.2 bits (178), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+G+ A T+ +L A G G +GK + + ++ L ++ V T L+DMY K G V
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F+++ K+ WN +I YA G EAL L +M + + TF+G+LSAC
Sbjct: 388 ALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSV---PPSDITFIGVLSAC 442
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCI--QIGLSSHLNVLTALIDMYVKTGLVH 62
G T++ +L A G+ G+ L I +IGLS+ L + LI MY K G +
Sbjct: 228 GFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLG--SKLISMYGKCGDLD 285
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++F+ ++ KD V W +I Y++NG EA L +M G+ ++ T +LSAC
Sbjct: 286 SARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSAC 344
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 79.3 bits (194), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +LPA + G +G+ L GY + G ++ V A I+MY K G++ +++F+ L
Sbjct: 217 TVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL 276
Query: 72 VD-KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +++ WN +IG+ A +G EAL L +M +G K ++ TFVGLL AC
Sbjct: 277 GNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC 327
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
LH + G S T LI Y K G + R++FD + +DV +WN +I Y R G
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ A+ L M + + + ++ G SE++
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEAL 199
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%)
Query: 3 WSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
+S ++ + V +L G + K+ HG I+I L + +L LI+ Y K G V
Sbjct: 54 YSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVE 113
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++FD ++++ +V WN +IG Y RN + EAL + +MR +G K + T +LSAC
Sbjct: 114 LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
A + + GK +H + G S++ V ++ +DMY K G + IF + +K++ L
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
WN +I +A++ E + L +KM+ GM N TF LLS C
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 374
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G S T+ +L A G + + K LH ++ + +L V TAL+D+Y K G++
Sbjct: 156 EGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKD 215
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F+S+ DK V W+ ++ Y +N EAL L ++ + ++ N T ++ AC
Sbjct: 216 AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + +A TV +LPA G+ +GK LHG+ I+ L ++ V +AL+DMY K G
Sbjct: 512 MLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGA 571
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +F +++ V + +I Y ++G+ A+ L M+ G+K ++ TFV +LSA
Sbjct: 572 IKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Query: 121 CPAS 124
C S
Sbjct: 632 CSYS 635
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS- 70
TV LL AA + N +GK H + I+ G+ + + LIDMY K+GL+ +K+F+
Sbjct: 421 TVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGS 479
Query: 71 -LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++D WN +I Y +NG + + +KM Q ++ N+ T +L AC
Sbjct: 480 GYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPAC 531
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
+++ T L+ A +G+ HG+ + + ++ +L+ MY + G VH
Sbjct: 314 IVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSF 373
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+F S+ ++DVV WN +I + +NGL E L L+ +M+ QG K + T LLSA
Sbjct: 374 GVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSA 428
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVK----TGLVHWG--RKIFDS 70
L A +T N GK++H + I+ +S V +L++MYV + RK+FD+
Sbjct: 114 LKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDN 173
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ K+VV WN LI Y + G EA M +K + +FV + A S SI
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSI 230
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLS--SHLNVLTALIDMYVKTGLVHWGRKIFDSLVD 73
+ PA + + +G +++G L V+++ I MY + G + R++FDS V+
Sbjct: 220 VFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 74 KDVVLWNCLIGNYARNGLVGEALYLL 99
+++ +WN +IG Y +N + E++ L
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELF 305
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 78.6 bits (192), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M GL +++T++ LLPA GK +HGY + GL H V +AL+DMY K G
Sbjct: 279 MLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGF 338
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F K V +N +I YA +GL +A+ L +M G K + TF +L+A
Sbjct: 339 ISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTA 398
Query: 121 C 121
C
Sbjct: 399 C 399
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M GL A V LL A+ + + GK +H ++ S ++++LIDMY K G
Sbjct: 108 MYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGE 167
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
V RK+F L ++D+V++N +I YA N EAL L++ M++ G+K + T+ L+S
Sbjct: 168 VGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALIS 226
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
L+ A G F G+ LH + + G++ + L+ YV+ G V RK+FD + +D
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRD 81
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +IG ARNG E+L ++M G+K ++ LL A
Sbjct: 82 ISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA 126
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +L A GK +HGY ++ GL S L V++AL+ MY + G + G+++FD +
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D+DVV WN LI +Y +G +A+ + ++M G TFV +L AC
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
+ + GK +H + + G SSH+ ++T L+DMY + G V + +F + ++VV W+ +I
Sbjct: 197 HLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIA 256
Query: 85 NYARNGLVGEALYLLQKM--RIQGMKTNSSTFVGLLSAC 121
YA+NG EAL ++M + NS T V +L AC
Sbjct: 257 CYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
S T +L+ G + +H + + G + T LI MY G V + RK+
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
FD + + +WN L G E L L KM G++++ T+ +L AC ASE
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 192
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ T++ LL A G +GK +H Y I++GL+ +L+ L+D+Y + G
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR-IQGMKTNSSTFVGLLS 119
V + +FD +VDK+ V W LI A NG EA+ L + M +G+ TFVG+L
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 120 AC 121
AC
Sbjct: 333 AC 334
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASAS-TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
M SGL+ + T L+ A + +G+++H I+ G S + V +L+ +Y G
Sbjct: 111 MRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG 170
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
V K+FD + +KD+V WN +I +A NG EAL L +M +G+K + T V LLS
Sbjct: 171 DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLS 230
Query: 120 AC 121
AC
Sbjct: 231 AC 232
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
+T++ +LP G + +G+++H + L + V AL++MY+K G + R +FD
Sbjct: 219 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR 278
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +DV+ W C+I Y +G V AL L + M+ +G++ N+ T L+S C
Sbjct: 279 MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 7 IASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRK 66
+ T + AAG+ + +G +HG ++ V AL+ MY+ G V R
Sbjct: 114 VPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARD 173
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+FD + ++DV+ WN +I Y RNG + +AL + M + + + +T V +L C
Sbjct: 174 VFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
+T+ LLPA + ++H Y + G S L+ T L+ +Y K G + KIF+
Sbjct: 421 ATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480
Query: 71 LVDK----DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+ +K DVVLW LI Y +G AL + +M G+ N TF L+AC S
Sbjct: 481 IQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHS 538
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + G+ +A T+ L+ GD GK LHG+ ++ + S + + T+LI MY K
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V ++F W+ +I +N LV +AL L ++MR + ++ N +T LL A
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 121 CPA 123
A
Sbjct: 430 YAA 432
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 70/124 (56%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G + ST ++ A + VG+ +H ++ G+ +H+ + ++L+DMY K G
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++ R++FD + +K+V W +I Y +NG EAL L +M+ ++ N TF+G LSA
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
Query: 121 CPAS 124
C S
Sbjct: 384 CSHS 387
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H I+ G LN+ L+ +++K G + + R++FD L + +N +I Y +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+GLV E L L+Q+M G K + T +L A
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKA 144
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGN-FVVGKSL----HGYCIQIGLSSHLNVLTALIDMY 55
M +SG A T+ ++L A+ G+ ++ +SL H I+ + ++TAL+D Y
Sbjct: 126 MSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTY 185
Query: 56 VKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
VK+G + R +F+++ D++VV +I Y G V +A + +++ +
Sbjct: 186 VKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDI 237
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ LH CI+ G ++V T+L+D Y+K GRK+FD + +++VV W LI YAR
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
N + E L L +M+ +G + NS TF L
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAAL 201
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK HG+ I+ L S L V +AL+ MY K G + ++F +KD+V WN +I YA+
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G +AL + ++M+ + +K + TF+G+ +AC
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
S +L LP + +H ++ V TAL+D YVK G V K+F
Sbjct: 401 SVILTALPV-------ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 453
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASES 126
+ DKD+V W+ ++ YA+ G A+ + ++ G+K N TF +L+ C A+ +
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +H ++ GL + V +LI++Y+K G V R +FD K VV WN +I YA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NGL EAL + MR+ ++ + S+F ++ C
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
++ A + +G+ + +GL S V ++LID+Y K G V GR++FD++V D
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V WN +I YA NG EA+ L +KM + G++ TF+ +L+AC
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTAC 561
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 48 LTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
L+ALI Y G V+ R +FD ++ V+LWN +I Y N + EAL L +MR +
Sbjct: 256 LSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-T 314
Query: 108 KTNSSTFVGLLSAC 121
+ +S T +++AC
Sbjct: 315 REDSRTLAAVINAC 328
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T LL A +G G+S+H + +GL S+L++ +LI MY K G + +IFD
Sbjct: 223 TFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQF 282
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
+KDVV WN +I YA++GL +A+ L + M + G K ++ T++G+LS+C
Sbjct: 283 SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
+F G H ++ G S + + ++L+ +Y +G V K+F+ + +++VV W +I
Sbjct: 135 DFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMIS 194
Query: 85 NYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+A+ V L L KMR N TF LLSAC S
Sbjct: 195 GFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
S+ T++ LL A +TG+ G+ +H Y + +L++ ALIDMY K G + R++F
Sbjct: 532 SSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF 591
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D+ KD V WN +I Y +G V A+ L +M +K TF+ LLSAC
Sbjct: 592 DAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSAC 644
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
ASA++V+ + G ++GKSLH Y ++ L ++V+ +LID+Y K G + ++
Sbjct: 434 ASATSVI---SSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRM 490
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
F D +V+ WN +I +Y +A+ L +M + K +S T V LL AC
Sbjct: 491 F-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
A + G G+ LHG+ ++ GL+S V +++ Y K+G F L D+D+
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
W +I + AR+G + E+ + +M+ +GM +
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPD 330
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+A T+ +L A +G +GK +H I++GL + V T++IDMY K G V RK F
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D + +K+V W +I Y +G +AL L M G++ N TFV +L+AC
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL--VHWGRKIFDSLVDK 74
+PA G T +S+H + I+ G ++V L+D Y K G V RKIFD +VDK
Sbjct: 196 VPAKGLT------ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK 249
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKM 102
D V +N ++ YA++G+ EA + +++
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
L + S+ + A + GK H G S + V +ALI MY G + R
Sbjct: 72 LYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDAR 131
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF------VGLLS 119
K+FD + +++V W +I Y NG +A+ L + + + + + F V ++S
Sbjct: 132 KVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVIS 191
Query: 120 AC---PA---SESI 127
AC PA +ESI
Sbjct: 192 ACSRVPAKGLTESI 205
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG +ST++ L+P +G+ ++ ++HGYC++ SH +V TAL +Y K +
Sbjct: 316 SGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
RK+FD +K + WN +I Y +NGL +A+ L ++M+ N T +LSAC
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
+T+L +LPA + +G +H + G SH VLT I +Y K G + G +F
Sbjct: 222 TTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFRE 281
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
D+V +N +I Y NG +L L +++ + G + SST V L+
Sbjct: 282 FRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S + T+ +L A G +GK +H S + V TALI MY K G
Sbjct: 411 MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R++FD + K+ V WN +I Y +G EAL + +M G+ TF+ +L A
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
Query: 121 C 121
C
Sbjct: 531 C 531
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+ L ++ST + AA + G+ +HG + G S L + + ++ MY K V
Sbjct: 113 TDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVED 172
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSA 120
RK+FD + +KD +LWN +I Y +N + E++ + + + + + +++T + +L A
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 70/121 (57%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +SG + ++ LL A G G GKS+HG+CI+ LN+ A+ DMYVK +
Sbjct: 226 MGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSI 285
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +F ++ +DV+ W+ LI Y +G V + L +M +G++ N+ TF+G+LSA
Sbjct: 286 LDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 345
Query: 121 C 121
C
Sbjct: 346 C 346
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ ++L A + G +H C+++G SS L V +AL+ MYV G + RK+FD +
Sbjct: 136 TLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM 195
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+D VL+ + G Y + G L + ++M G +S V LL AC
Sbjct: 196 PVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMAC 245
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + T L A ++ + ++G+S+H + S++ V +ALI MY K G
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V ++FDS+ +K++V W +I YARNG EAL L+ +M +G + + F +LS
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Query: 121 C 121
C
Sbjct: 597 C 597
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV +L A + G+ +H ++ + + + V T+L+DMY K G + RK+FD +
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM 345
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++ V W +I +AR G EA+ L + M+ + + N+ T V +L AC
Sbjct: 346 SNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRAC 395
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
LIA+ TV+ +L A G G ++GK LH I+ + ++ + + L+ +Y K G
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF 440
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
+ L +DVV W +I + G EAL L++M +G++ N T+ L AC SE
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Query: 126 SI 127
S+
Sbjct: 501 SL 502
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK-T 109
LI V+ G + + RK+FDS+ +K+ V W +I Y + GL EA L + G++ T
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 110 NSSTFVGLLSAC 121
N FV LL+ C
Sbjct: 183 NERMFVCLLNLC 194
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 68/124 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ +T+L +L A G S HGYC+ G + + ++ AL+DMY K G
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +++FD++ +D+V WN ++ + +GL EAL L M+ G+ + T + +LSA
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSA 519
Query: 121 CPAS 124
C S
Sbjct: 520 CSHS 523
Score = 75.9 bits (185), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
GL + ST++ + PA G G GK++HGYC ++G S+ L V T ++D+Y K+ + +
Sbjct: 199 DGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIY 258
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEA 95
R++FD K+ V W+ +IG Y N ++ EA
Sbjct: 259 ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEA 290
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ + T +L A GK +H + ++ + V TAL+D Y K G +
Sbjct: 97 SGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEM 156
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSA 120
K+FD + +D+V WN +I ++ + + + + L M RI G+ N ST VG+ A
Sbjct: 157 AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPA 214
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+ G+ +H Y ++ G L V +I Y K G + + F + KDV+ +N LI
Sbjct: 322 GDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLI 381
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
N E+ L +MR G++ + +T +G+L+AC
Sbjct: 382 TGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 76.3 bits (186), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 69/121 (57%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +S ++A++ T+ +L + +G+ +HG+ I+ +S ++ V AL++MY K GL
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGL 484
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ G +F+++ DKD++ WN +I Y +G +AL + +M G + V +LSA
Sbjct: 485 LSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSA 544
Query: 121 C 121
C
Sbjct: 545 C 545
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG S + + + + + +HGY I+ G +L ALI +Y K G
Sbjct: 285 MRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGK 344
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR----IQGMKTNSSTFVG 116
V +F + +K + WN LI ++ G + EAL L ++ + +K N T+
Sbjct: 345 VKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTS 404
Query: 117 LLSAC 121
++ C
Sbjct: 405 VIKGC 409
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M GL + ++L A G F + ++ H IQIGL +L+V+ L+ +Y K G
Sbjct: 149 MRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGR 208
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +F + ++ + WN +I +++ A+ + + M+ + K + T+ +LS
Sbjct: 209 MGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLS 267
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 75.9 bits (185), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
S +T+ +LPA + GK +H ++ + +L +L+DMY K G V + R++F
Sbjct: 336 SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVF 395
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D ++ KD+ WN ++ YA NG + E + L + M G+ + TFV LLS C
Sbjct: 396 DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGC 448
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
++ + L A D + VG+ +H ++ V L+ +Y+++GL RK+FD +
Sbjct: 238 SISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM 297
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++VV WN LI ++ V E L +KM+ + + + +T +L AC
Sbjct: 298 SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPAC 347
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQ--IGLSSHLNVLTALIDMYVKT 58
M SG + T+L +LPA G +G+ +H Y + G+++ ++ T+LIDMY K
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 59 GLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
G + ++F+S++ K + WN +I +A +G + L +MR G++ + TFVGLL
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 119 SACPAS 124
SAC S
Sbjct: 478 SACSHS 483
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + + ST++ ++ A +G+ +G+ +H + G S+L ++ ALID+Y K G
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F+ L KDV+ WN LIG Y L EAL L Q+M G N T + +L A
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 121 C 121
C
Sbjct: 377 C 377
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 31/154 (20%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG----- 59
GL+ ++ T +L + + F G+ +HG+ +++G L V T+LI MYV+ G
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 60 --------------------------LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVG 93
+ +K+FD + KDVV WN +I YA G
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248
Query: 94 EALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
EAL L + M ++ + ST V ++SAC S SI
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 75.5 bits (184), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ T +L + + +GK +H I+ L S + + + L+DMY K G +H
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS 657
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +F+ + +D V WN +I YA +G EA+ L ++M ++ +K N TF+ +L AC
Sbjct: 658 RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRAC 714
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G ++G I+ LS + V A IDMY K + ++FD + +D V WN +I + +
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG E L+L M ++ + TF +L AC
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ T I+L + +G +HG +++G + + +AL+DMY K
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++F + +K+ V W+ +I +N L+ AL ++M+ + S + +L +
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 121 CPA 123
C A
Sbjct: 291 CAA 293
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTGLVHWGRKI 67
+A TV+ LL A + + K HG I+ L+ + ++V T+++D Y K G + R+
Sbjct: 425 NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRT 484
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
FD + +K+++ W +I YA NGL +AL L +M+ +G N+ T++ LSAC
Sbjct: 485 FDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSAC 538
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTGLVHWGRKIFDS 70
TV +L A + VG+S+HG+ I+ G + + V +LIDMY K V ++FD
Sbjct: 228 TVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDE 287
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
+++V WN ++ + N EAL + M + ++ + T V LL C E
Sbjct: 288 TTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
KS+HG I+ G S+ L++LID Y LV + DS+ KDVV + +I A
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
G EA+ + MR N+ T + LL+AC S
Sbjct: 408 GRSDEAISIFCHMRDT---PNAITVISLLNACSVS 439
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +HGY I+ G +V +++ MY + + RK+FD + ++DV+ W+ +I +Y +
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 89 NGLVGEALYLLQKMRIQGMKTNSS--TFVGLLSACPASESI 127
+ L L ++M + KT T +L AC E I
Sbjct: 203 SKEPVVGLKLFKEM-VHEAKTEPDCVTVTSVLKACTVMEDI 242
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
++ D Y+K G + G + FD + +D V WN ++ G E L+ K+R+ G +
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 109 TNSSTFVGLLSAC 121
N+ST V ++ AC
Sbjct: 125 PNTSTLVLVIHAC 137
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S + ++ ST+ +L A G N +G +H I++GL+S++ V ++L+ MY K
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ K+F++L +K+ V WN +I YA NG + + L M+ G + TF LLS
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 121 CPASESI 127
C AS +
Sbjct: 438 CAASHDL 444
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+++ + + L A GK +H ++ GL L+ ++LIDMY K G++
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
RK+F SL + VV N LI Y++N L EA+ L Q+M +G+ + TF ++ AC
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKP 642
Query: 125 ESI 127
ES+
Sbjct: 643 ESL 645
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG T LL + + +G H I+ L+ +L V AL+DMY K G
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R+IF+ + D+D V WN +IG+Y ++ EA L ++M + G+ ++ + L A
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 121 C 121
C
Sbjct: 539 C 539
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T I+L N G+ +H I++GL + AL+DMY K + R++F+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
VD + V W CL Y + GL EA+ + ++MR +G + + FV +++
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTA--LIDMYVKT 58
M G++ +T + +L + G+++H L+ L+ LT+ LIDMY K
Sbjct: 723 MRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH--LAHDLDELTSNTLIDMYAKC 780
Query: 59 GLVHWGRKIFDSLVDK-DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGL 117
G + ++FD + + +VV WN LI YA+NG +AL + MR + + TF+G+
Sbjct: 781 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 840
Query: 118 LSAC 121
L+AC
Sbjct: 841 LTAC 844
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL-TALIDMYVKTG 59
M G+ S T ++ A + +G HG + G SS L +L+ MY+ +
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Query: 60 LVHWGRKIFDSLVD-KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
+ +F L K +VLW ++ +++NG EAL ++MR G+ + +TFV +L
Sbjct: 680 GMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL 739
Query: 119 SAC 121
C
Sbjct: 740 RVC 742
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK++H + +G+ S + A++D+Y K V + K FD ++KDV WN ++ Y+
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYS 136
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
G G+ L + + N TF +LS C ++
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNV 176
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ HG ++ G S V TAL DMY K G + R+ FD+++ K+ V+WN +I Y
Sbjct: 538 GRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGH 597
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
NG EA+ L +KM G K + TFV +L+AC S
Sbjct: 598 NGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHS 633
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG- 59
M G + S T+ +L A + V G HG ++ GL ++ V AL+ MY K G
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+V +G ++F+SL + V + +IG AR V EA+ + + M +G++ +S +LS
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 120 ACPASE 125
E
Sbjct: 249 ISAPRE 254
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL D + GK +HG+ +++G+ S + L+D+Y++ G + RK+FD + +D
Sbjct: 12 LLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRD 71
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKM 102
V WN + + G +GEA + M
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGM 98
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + L +T+ ++L + GK +HG I+ +S + ++++ LI +Y +
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 61 VHWGRKIFDSLVDK-DVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLL 118
+ IFD +++ D+ WN +I + N L +AL L ++M + N ++F +L
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526
Query: 119 SAC 121
S+C
Sbjct: 527 SSC 529
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK +H +++G L++ +L+++Y K ++ IF + + +VV WN +I +
Sbjct: 267 LGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFG 326
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +++ L +MR G + N T + +L AC
Sbjct: 327 QEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC 360
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 73.9 bits (180), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+L +LPA DTG +G+ H + + L + V TA++DMY K G + ++IFD +
Sbjct: 276 TILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEM 335
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+K V WN +I YA NG AL L M I+ K + T + +++AC
Sbjct: 336 PEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPDEITMLAVITAC 384
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+I T+ ++ A G +GK +H Y +Q G + + +AL+DMY K G
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F +L K++ WN +I A +G EAL + KM ++ +K N+ TFV + +A
Sbjct: 1083 LERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 121 C 121
C
Sbjct: 1143 C 1143
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + S+ T L+ A+ F G+SL + + G H+ + T LID Y TG
Sbjct: 862 MLRDSVSPSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGR 919
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
+ RK+FD + ++D + W ++ Y R
Sbjct: 920 IREARKVFDEMPERDDIAWTTMVSAYRR 947
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSS----HLNVLTALIDMYV 56
M GL ST +LL +AG T N GK +H C+ ++ L + +L+ MY
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH--CVIAKTTACYDPDLILQNSLVSMYA 514
Query: 57 KTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVG 116
K G + +IF +V KD V WN +I + +GL +AL L ++M G K NS TF+G
Sbjct: 515 KCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLG 574
Query: 117 LLSACPAS 124
+LSAC S
Sbjct: 575 VLSACSHS 582
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
T++ID Y++ G V +F L DKD V W +I +N L EA LL M G+K
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 109 TNSSTFVGLLSACPASESI 127
+ST+ LLS+ A+ ++
Sbjct: 464 PLNSTYSVLLSSAGATSNL 482
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG + + +L AA + +G +H Y +IGL + +V ++L+ MY K G
Sbjct: 643 MVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ K F + D++ W LI +YA++G EAL + M+ +G K + TFVG+LSA
Sbjct: 703 IDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSA 762
Query: 121 C 121
C
Sbjct: 763 C 763
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G ST+ +L + GK +HGY ++ G+ +++ +AL++MY K G +
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
R+++D L + D V + LI Y+++GL+ + L + M + G +S +L A S
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 125 ES 126
+
Sbjct: 666 DE 667
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK +HGY ++ GL L V ++L +Y K G + K+F + KD W +I +
Sbjct: 468 LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
G + EA+ L +M G + ST +L+ C + S+
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSL 567
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC + T +L A GK + I+ G + + V TA++D+Y K G
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGH 300
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++F + + VV W ++ Y ++ AL + ++MR G++ N+ T ++SA
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISA 360
Query: 121 C 121
C
Sbjct: 361 C 361
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ + TV ++ A G +H + + G +V ALI MY K+G
Sbjct: 342 MRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGD 401
Query: 61 VHWGRKIFDSLVD-KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ ++F+ L D + + N +I +++++ G+A+ L +M +G++T+ + LLS
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 50 ALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKT 109
+L+ Y +G + K+FD++ DVV N +I Y ++ L E+L KM G +
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 110 NSSTFVGLLSACPA 123
N ++ ++SAC A
Sbjct: 149 NEISYGSVISACSA 162
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 73.9 bits (180), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 68/121 (56%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC + + TV+ +L A G G+ +G+ ++ + + ++ V A +DM++K G
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
R +F+ + ++VV W+ +I YA NG EAL L M+ +G++ N TF+G+LSA
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
Query: 121 C 121
C
Sbjct: 321 C 321
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
K +H ++ G S ++LT L++ V G + + R++FD + + LWN L Y RN
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTF 114
L E+L L +KMR G++ + T+
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTY 112
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 54/110 (49%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T ++ A G+F G +LH + ++ G V T L+ MY+K G + +F+S+
Sbjct: 111 TYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM 170
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
KD+V WN + + G AL KM ++ +S T V +LSAC
Sbjct: 171 QVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSAC 220
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL+ A T+ LL +GK LHGY ++ + V TALIDMY K G
Sbjct: 444 GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQA 503
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F S+ WN +I Y+ +GL AL +MR +G+K + TF+G+LSAC
Sbjct: 504 ESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G SA+T++ LLP G G G+S+HG + GL V ALI Y K
Sbjct: 142 MLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAE 201
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F + DK V WN +IG Y+++GL EA+ + + M + ++ + T + LLSA
Sbjct: 202 LGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Query: 121 CPASESI 127
+ E +
Sbjct: 262 HVSHEPL 268
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 40 GLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLL 99
GL + V T+L+++Y+K G V + +FD + ++D V+WN LI Y+RNG +A L
Sbjct: 80 GLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLF 139
Query: 100 QKMRIQGMKTNSSTFVGLLSAC 121
M QG +++T V LL C
Sbjct: 140 IVMLQQGFSPSATTLVNLLPFC 161
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L + + +G SLHGY I+ GL + V+ LI MY K V +F+ L +
Sbjct: 353 ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP 412
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
++ WN +I ++G A + +M + G+ ++ T LL+ C
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGC 459
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+T+++LL A G GN +GK +H + L + + TAL+DMY K+G + + R +
Sbjct: 212 PDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLV 269
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQK-MRIQGMKTNSSTFVGLLSAC 121
F+ +VDK+V W+ +I A+ G EAL L K M+ ++ N TF+G+L AC
Sbjct: 270 FERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +S + ++ T+L LLPA + + + +HG ++ L + V AL D Y K+G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + R IF + KD++ WN LIG Y +G G AL L +M+ QG+ N T ++ A
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G++ +A T++ + A G +H +++G + V +L+DMY K G
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ RK+FDS+ +KDV WN +I Y + G G+A L +M+ ++ N T+ ++S
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL--TALIDMYVKTGLV 61
G ST L LL + D+G+ +G+ LH + GL + +V T L+ MY K G +
Sbjct: 75 QGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCI 131
Query: 62 HWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
RK+FDS+ ++++ W+ +IG Y+R E L + M G+ + F +L C
Sbjct: 132 ADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGC 191
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 54/92 (58%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L + G+ GK +H I++G+SS L V +++ +Y K G + + K F + ++D
Sbjct: 187 ILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD 246
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
V+ WN ++ Y +NG EA+ L+++M +G+
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 46 NVLT--ALIDMYVKTGLVHWGRKIF-----DSLVDKDVVLWNCLIGNYARNGLVGEALYL 98
N++T +I Y+K G +F D V ++ WN +I Y +NG EAL L
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 99 LQKMRIQGMKTNSSTFVGLLSAC 121
+KM+ NS T + LL AC
Sbjct: 512 FRKMQFSRFMPNSVTILSLLPAC 534
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 73.2 bits (178), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 62/110 (56%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T L+ AA + + +G+SLHG ++ + S + V +LI Y G + K+F ++
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+KDVV WN +I + + G +AL L +KM + +K + T VG+LSAC
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 242
Score = 71.6 bits (174), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 61/110 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ L A G +G+ +H Y + G+ + +V +ALI MY K G + R++F+S+
Sbjct: 367 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+DV +W+ +IG A +G EA+ + KM+ +K N TF + AC
Sbjct: 427 EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCAC 476
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 32/146 (21%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
AS T++ +L A N G+ + Y + ++ +L + A++DMY K G + +++
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 68 FD-------------------------------SLVDKDVVLWNCLIGNYARNGLVGEAL 96
FD S+ KD+V WN LI Y +NG EAL
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 97 YLLQKMRIQ-GMKTNSSTFVGLLSAC 121
+ ++++Q MK N T V LSAC
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSAC 375
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+GL T + LLPA+ + G+++HGY ++ G H+ + TALIDMY + G +
Sbjct: 328 NGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
IFD + +K+V+ WN +I Y +NG AL L Q++ + +S+T +L A
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAE 443
Query: 124 SESI 127
S S+
Sbjct: 444 SLSL 447
Score = 72.4 bits (176), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 67/121 (55%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S L+ ++T+ +LPA ++ + G+ +H Y ++ S+ +L +L+ MY G +
Sbjct: 425 SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLED 484
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
RK F+ ++ KDVV WN +I YA +G +++L +M + N STF LL+AC
Sbjct: 485 ARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSI 544
Query: 124 S 124
S
Sbjct: 545 S 545
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Query: 28 VGKSLHGYCIQIGLSS-HLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
+GK +H + ++ + + + V+T+++DMY K G V + +IF+ ++ +++V WN +IG Y
Sbjct: 249 MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCY 308
Query: 87 ARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSA 120
ARNG V +A QKM Q G++ + T + LL A
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M ++G+ A T ++ + + GK +H I++G S + V +LI +Y+K G
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
K+F+ + ++D+V WN +I Y G +L L ++M G K + + + L A
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGA 240
Query: 121 C 121
C
Sbjct: 241 C 241
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 69/118 (58%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+G+ + T+ +LPA G+ G+S HG+ +++ L +++V +ALIDMY K G ++
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +F+ + K++V WN L+ ++ +G E + + + + +K + +F LLSAC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499
Score = 65.9 bits (159), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G TV +LP+ GD+ +G+ +HGY I+ GL V++A+IDMY K+G V+
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F+ + + N I +RNGLV +AL + + + Q M+ N ++ +++ C
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGC 363
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GLI + + L + F VGK +H GL V ++ MY++ G +
Sbjct: 111 GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA 170
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
RK+FD + DKDVV + L+ YAR G + E + +L +M G++ N ++ G+LS
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILS 225
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTG 59
M SG T+L L+ G G+ GK + G ++ + ALIDMY K G
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+H R IFD+ +K VV W +I YA NG+ EAL L KM K N TF+ +L
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQ 467
Query: 120 ACPASESI 127
AC S S+
Sbjct: 468 ACAHSGSL 475
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
+H + I+ S + V TA +DM+VK V + K+F+ + ++D WN ++ + ++G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+A L ++MR+ + +S T + L+ + +S+
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSL 169
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
ST + L + + G+ +H + I +G + + I MY K+ R +FD
Sbjct: 257 STFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDI 316
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ + V W +I YA G + EAL L M G K + T + L+S C
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ L+ +A + + +++H I++G+ + V I Y K G + + +F+++
Sbjct: 155 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI 214
Query: 72 V--DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
D+ VV WN + Y+ G +A L M + K + STF+ L ++C E++
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETL 272
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 72.8 bits (177), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 62/121 (51%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ T+ I++ + + K H I+ G S + TAL+D Y K G V
Sbjct: 319 SGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDT 378
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
R +FD L K+++ WN L+G YA +G +A+ L +KM + N TF+ +LSAC
Sbjct: 379 ARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAY 438
Query: 124 S 124
S
Sbjct: 439 S 439
Score = 65.5 bits (158), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 1 MCWSGLI-ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
M W L T ++L A+ G+ VGK LH +++G+ + V LIDMY K G
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF 114
+ R F+ + +K V WN +I YA +G EAL LL MR G+ + T
Sbjct: 274 DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTL 328
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 72.8 bits (177), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSS-HLNVLTALIDMYVKTGLVHWG 64
++ + +T+ ++L A G F GK +H Y +G + +NV ALIDMY K G +
Sbjct: 184 VVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F + +D++ WN +I A +G EAL L +M+ G+ + TFVG+L AC
Sbjct: 244 MEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCAC 300
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 72.8 bits (177), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 53/89 (59%)
Query: 33 HGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLV 92
HG+ Q G + V +LIDMYVK G V G +F ++++D V WN +I +A+NG
Sbjct: 415 HGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Query: 93 GEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
EAL L ++M G K + T +G+LSAC
Sbjct: 475 NEALELFREMLESGEKPDHITMIGVLSAC 503
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G + + + +L A + G +H + S + + +AL+DMY K G V+
Sbjct: 147 GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDA 206
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+++FD + D++VV WN LI + +NG EAL + Q M ++ + T ++SAC +
Sbjct: 207 QRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL 266
Query: 125 ESI 127
+I
Sbjct: 267 SAI 269
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 31/123 (25%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD-------------------- 69
+ +H I+ G S+ + + LID Y K G + GR++FD
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 70 -----------SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
S+ ++D WN ++ +A++ EAL M +G N +F +L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 119 SAC 121
SAC
Sbjct: 160 SAC 162
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 72.4 bits (176), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGL----SSHLNVLTALIDMYV 56
M SG+ T+ +LP G + G+ +HGY I GL SS+ + +L+DMYV
Sbjct: 354 MLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYV 413
Query: 57 KTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVG 116
K G + R +FDS+ KD WN +I Y AL + M G+K + TFVG
Sbjct: 414 KCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVG 473
Query: 117 LLSACPAS 124
LL AC S
Sbjct: 474 LLQACSHS 481
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD-VVLWNCLIGNYAR 88
K +HG ++G S V + L+ Y K V +K+FD L D+D VLWN L+ Y++
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQ 239
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+AL + KMR +G+ + T +LSA S I
Sbjct: 240 IFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDI 278
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ S T+ +L A +G+ G+S+HG ++ G S + V ALIDMY K+
Sbjct: 253 MREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKW 312
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ IF+++ ++D+ WN ++ + G L L ++M G++ + T +L
Sbjct: 313 LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPT 372
Query: 121 C 121
C
Sbjct: 373 C 373
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHWGRKI 67
+ +T + L ++V G+ +HG+ ++ G L T+L++MY K GL+ +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
F ++DV +N LI + NG +A+ ++MR G+ + TF LL A E
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME 175
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 72.4 bits (176), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK +HG ++ SH+ V ++L+DMY K G + R+IF+ L ++DVV +I YA
Sbjct: 171 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYA 230
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ GL EAL + ++ +GM N T+ LL+A
Sbjct: 231 QLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK H + ++ L + + +LIDMY K G + + R++FD++ ++ + WN ++ Y++
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332
Query: 89 NGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSAC 121
+GL E L L + MR + +K ++ T + +LS C
Sbjct: 333 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGC 366
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL A D G+ +H + I+ + T L+ Y K + RK+ D + +K+
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV W +I Y++ G EAL + +M K N TF +L++C
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSC 163
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 72.4 bits (176), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
SA T LL + G+ G+ +H +++GLS + V ALI MY K G + ++F
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ + +++V+ W +I +A++G L +M +G+K N T+V +LSAC
Sbjct: 533 NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVK--- 57
M SG + T+ + A + N +GK LH + I+ GL +V +L+DMY K
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSA 317
Query: 58 TGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN-GLVGEALYLLQKMRIQG-MKTNSSTFV 115
G V RK+FD + D V+ W LI Y +N L EA+ L +M QG ++ N TF
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 116 GLLSAC 121
AC
Sbjct: 378 SAFKAC 383
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
A G+ + VGK + G + GL+S+ +V ++I M+VK+ + ++ F+SL +K++
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
V +N + RN +A LL ++ + + ++ TF LLS
Sbjct: 440 VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV +++ A D G+ + GY I+ G+ + +V T+ I MY K+G + ++F +
Sbjct: 461 TVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEV 520
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ DV ++ +I + A++G EAL + + M+ G+K N F+G+L AC
Sbjct: 521 QNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%)
Query: 21 GDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWN 80
G+ + +G+ LHG + GLS + ++ LIDMY K G + +FD ++D V WN
Sbjct: 159 GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 81 CLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
LI Y R G E L LL KM G+ + +L AC
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC 259
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G ++H Y ++G+ + V TAL+DMY K G + K+F + K+VV +N +I + +
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 89 -----NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ EA L M+ +G++ + STF +L AC A++++
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTL 374
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
IL A +G+ V+GK HG+ I+ L+ L +L L++MY K + + R++FD + ++
Sbjct: 52 ILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPER 111
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++ +N LI Y + G +A+ L + R +K + T+ G L C
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC 158
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 4 SGLIASAS-TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
+GL A S TV+ LL A + G+F G ++H Y I+ GL S L V LID+Y + G +
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+K+FD + +D++ WN +I Y N A+ L Q+MR+ ++ + T + L S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
+ A+ T + +LPA G G LHG ++ GL + V+T+L DMY K G +
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 506
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+F + + V WN LI + +G +A+ L ++M +G+K + TFV LLSAC S
Sbjct: 507 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
T++ L G+ +S+ G+ ++ G + + A++ MY K GLV R +F+
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSAC 121
L + DV+ WN +I YA+NG EA+ + M +G + N T+V +L AC
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPAC 461
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SGL T +L A + G +H ++ G + V +LI +Y +
Sbjct: 144 MLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V R +FD + +D+ WN +I Y ++G EAL L +R +S T V LLSA
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSA 256
Query: 121 C 121
C
Sbjct: 257 C 257
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L D +GK LHG ++ G + V AL+ MY K G + +F + KD+
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V WN +I Y+R+G AL + M+ +G+K + +T V +LSAC
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 44 HLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR 103
+++ +I Y + G + + +FD + +D V W +I Y+++G EAL L +M
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 104 IQGMKTNSSTFVGLLSAC 121
+G + N S+F LS C
Sbjct: 402 REGGRLNRSSFSSALSTC 419
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
GL T+ ++L + G + G+ +HGY ++ GL V +L+ MY G +
Sbjct: 40 QGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEI 99
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSACP 122
K+FD + +DVV WN LI +Y NG +A+ + ++M + +K + T V LSAC
Sbjct: 100 THKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACS 159
Query: 123 A 123
A
Sbjct: 160 A 160
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ ++ LL TG GK +HGY + ++ V TAL+DMY K G
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++F + ++D W LI A NG+ G AL L +M G++ ++ TFV +L+A
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 121 C 121
C
Sbjct: 390 C 390
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S L T++ L A N +G+ ++ + + + + AL+DM+ K G +
Sbjct: 142 SNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDK 200
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ 105
R +FDS+ DK+V W ++ Y G + EA L ++ ++
Sbjct: 201 ARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 2 CWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL--TALIDMYVKTG 59
C SG+ + +T++ +L A TG +G +HGY ++G + ++V TAL+DMY K G
Sbjct: 212 CGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCG 271
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
++ +F+ + K+V W + A NG E LL +M G+K N TF LLS
Sbjct: 272 CLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLS 331
Query: 120 A 120
A
Sbjct: 332 A 332
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 28 VGKSLHGYCIQIGLSSHLNVL-TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
VG+ +HG ++G ++ T L+ Y K G + + RK+FD + ++ V WN +IG Y
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 87 ARNGLVG-----EALYLLQKMRI--QGMKTNSSTFVGLLSA 120
+ G +A+ L ++ G++ +T V +LSA
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSA 229
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SGL A+ V+ +L A ++G +G +H + L S+ VL AL+DMY K G
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F+ + KD+V WN ++ +G EA+ L +MR +G++ + TF+ +L +
Sbjct: 366 LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
Query: 121 C 121
C
Sbjct: 426 C 426
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG--LVH 62
GL A T LL A V K +H + ++GLSS + V ALID Y + G V
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVR 171
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
K+F+ + ++D V WN ++G + G + +A L +M
Sbjct: 172 DAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM 211
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 55 YVKTGLVHWGRKIFDS--LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSS 112
Y K G + R +FD L K+VV W +I YA GL+ EA L+ +M G+K +++
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 113 TFVGLLSACPAS 124
+ +L+AC S
Sbjct: 317 AVISILAACTES 328
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 71.6 bits (174), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQI-GLSSHLNVLTALIDMYVKTG 59
MC SG+ ++ ++ A + G K +H CI + GL S L++ ALI+MY K G
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHS-CIHVNGLESELSINNALINMYAKCG 393
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ R +F+ + ++VV W+ +I + +G +AL L +M+ + ++ N TFVG+L
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 120 ACPAS 124
C S
Sbjct: 454 GCSHS 458
Score = 69.7 bits (169), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+ L +L A G LHG +I V T +DMY G +++ R +FD +
Sbjct: 113 SFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEM 172
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+DVV WN +I Y R GLV EA L ++M+ + + ++SAC
Sbjct: 173 SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 31/137 (22%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRK--------- 66
++ A G TGN ++++ + I+ + ++LTAL+ MY G + R+
Sbjct: 218 IVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN 277
Query: 67 ----------------------IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI 104
IFD KD+V W +I Y + EAL + ++M
Sbjct: 278 LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 337
Query: 105 QGMKTNSSTFVGLLSAC 121
G+K + + ++SAC
Sbjct: 338 SGIKPDVVSMFSVISAC 354
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ ++ L A + G G +H Y + +++ V +LID+Y + G
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V + R++F ++ + VV WN +I +A NG E+L +KM+ +G K ++ TF G L+A
Sbjct: 257 VEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTA 316
Query: 121 C 121
C
Sbjct: 317 C 317
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 1 MCWSGLIASASTVLILLPAAGD--TGNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVK 57
M +G+ + T + LL GD +G+ +G LHGY ++GL +H+ V TA+I MY K
Sbjct: 62 MTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSK 121
Query: 58 TGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
G R +FD + DK+ V WN +I Y R+G V A + KM
Sbjct: 122 RGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKM 166
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+A T + ++ AA + VG S+H IQ G S V +L+DMY K G++ K F
Sbjct: 603 NAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCF 662
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +K +V WN ++ YA +GL A+ L M+ +K +S +F+ +LSAC
Sbjct: 663 IEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC 715
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+ V G ++H Y +Q GL ++V T+L+ MY K G + ++F ++ D+DVV W+ +I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+Y + G EA+ L + M +K N+ T +L C
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
Score = 65.5 bits (158), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GKS+H Y I+ + S L TA+I MY K G K F+ L KD V +N L Y
Sbjct: 419 LGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYT 478
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ G +A + + M++ G+ +S T VG+L C
Sbjct: 479 QIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + L A + +F G +H ++GL S + + TAL++MY K +
Sbjct: 95 GIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR 103
R++FD + KDVV WN ++ A+NG AL L MR
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR 193
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + T++ +L ++ G ++G I+ G S +V ALI+M+ K +
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556
Query: 65 RKIFDSL-VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+FD +K V WN ++ Y +G EA+ ++M+++ + N+ TFV ++ A
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRA 613
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 22 DTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNC 81
+ NF +HG I GL H LI+ Y R IFDS+ D VVLWN
Sbjct: 14 ECKNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNS 69
Query: 82 LIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSACPAS 124
+I Y R GL EAL M +G+ + +F L AC S
Sbjct: 70 MIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGS 113
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G + ST+++LL A G + G+S+H I+ L+S + + TALIDMY K
Sbjct: 241 MVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKE 300
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM-KTNSSTFVGLLS 119
V R+IFDSL ++ V WN +I + +G L L + M I GM + + TFVG+L
Sbjct: 301 VGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM-INGMLRPDEVTFVGVLC 359
Query: 120 AC 121
C
Sbjct: 360 GC 361
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 31/148 (20%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G + + T + L+ T GK HG I+ G L V +L+ MY G +
Sbjct: 113 GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLA 172
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLV-------------------------------G 93
+K+F + +D+V WN +I RNG V G
Sbjct: 173 KKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPG 232
Query: 94 EALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ L ++M G + N ST V LL+AC
Sbjct: 233 VSISLFREMVRAGFQGNESTLVLLLNAC 260
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 13 VLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLV 72
+ I + A+ + GK +H I+ G S+L V+ +++D+Y + G + + F +
Sbjct: 216 ITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME 275
Query: 73 DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DKD++ WN LI R+ EAL + Q+ QG N TF L++AC
Sbjct: 276 DKDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAAC 323
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G + + T L+ A + G+ LHG + G + ++ + ALIDMY K G +
Sbjct: 307 QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPD 366
Query: 64 GRKIFDSLVD-KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++F +VD +++V W ++ Y +G EA+ L KM G++ + F+ +LSAC
Sbjct: 367 SQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSAC 425
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%)
Query: 42 SSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQK 101
H + T LI Y + GLV R +FD + D+DVV W +I YA + A +
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 102 MRIQGMKTNSSTFVGLLSAC 121
M QG N T +L +C
Sbjct: 102 MVKQGTSPNEFTLSSVLKSC 121
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+LPA G G GK +H I+ H+ V +ALIDMY K +H+ + +FD + K+
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV W ++ Y + G EA+ + M+ G+ + T +SAC
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Score = 65.9 bits (159), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 30/140 (21%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +L + G+ +GK +HG I++G S+L V + L+ MY G + +K+F L
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 72 VDKDVVLWNCLIG------------------------------NYARNGLVGEALYLLQK 101
D++ V++N L+G A+NGL EA+ ++
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 102 MRIQGMKTNSSTFVGLLSAC 121
M++QG+K + F +L AC
Sbjct: 261 MKVQGLKMDQYPFGSVLPAC 280
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ T+ + A + + G HG I GL ++ V +L+ +Y K G
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++F+ + +D V W ++ YA+ G E + L KM G+K + T G++SA
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 121 C 121
C
Sbjct: 482 C 482
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T ILL + + G LHG ++ G +H+ V AL++MY K+G + RK F +
Sbjct: 340 TFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGM 399
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+D+V WN +I + +GL EAL +M G N TF+G+L AC
Sbjct: 400 TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQAC 449
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLN---VLTALIDMYVKTGLVHWGRKIFDSLV 72
LL ++ +G+S+H + I SS + +LI++YVK RK+FD +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 73 DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVG--LLSACPASESI 127
+++VV W ++ Y +G E L L + M G ++ + FV + +C S I
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSG-ESRPNEFVATVVFKSCSNSGRI 152
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ +++ +LP+ G+ +GK +H Y + G V ALI+MY K G+
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++F + KDV+ W+ +I YA +G A+ +M+ +K N TF+GLLSA
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSA 351
Query: 121 C 121
C
Sbjct: 352 C 352
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T + + G+ +GK +HG+ + G H+ ALIDMY+K + K+FD +
Sbjct: 111 TFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM 170
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
++DV+ WN L+ YAR G + +A L M
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLM 201
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 22 DTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNC 81
D+ N G LH ++ GL S T+L+ Y K GL+ R++F++++D+D+VLWN
Sbjct: 154 DSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNA 213
Query: 82 LIGNYARNGLVGEALYLLQ-----KMRIQGMKTNSSTFVGLLSAC 121
L+ +Y NG++ EA LL+ K R +G + TF LLSAC
Sbjct: 214 LVSSYVLNGMIDEAFGLLKLMGSDKNRFRG---DYFTFSSLLSAC 255
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H ++ + V TAL++MY K+ + R+ F+S+V ++VV WN +I +A+
Sbjct: 260 GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
NG EA+ L +M ++ ++ + TF +LS+C +I
Sbjct: 320 NGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAI 358
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
K + + G + L+V +LI Y + G + F S+ + D+V W +IG A +
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASH 421
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G E+L + + M +Q ++ + TF+ +LSAC
Sbjct: 422 GFAEESLQMFESM-LQKLQPDKITFLEVLSAC 452
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 65/118 (55%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S L A ST +L A+ + ++GK LH + I+ G ++ + L+DMY K G +
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F+ + D++ V WN LI +A NG A+ KM G++ +S + +G+L+AC
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC 563
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A + + +G+ LH + S L+V +L+DMY K + IF SL +
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
V W LI Y + GL G L L KMR ++ + STF +L A + S+
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASL 468
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSH--LNVLTALIDMYVKTGLVHWGRKIFD 69
T LLP D +H + +++G ++ L V L+ Y + + +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +KD V +N LI Y ++GL E+++L KMR G + + TF G+L A
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 44 HLNVLTA--LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQK 101
H N ++ +I +VKTG V R +FD++ D+ VV W L+G YARN EA L ++
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 102 MRIQGMKT--NSSTFVGLLSAC 121
M T + TF LL C
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGC 157
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG S T +L A +F +G+ LH + G S +V ++D Y K
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
V R +FD + + D V +N +I +Y++ +L+ ++M+ G + F +LS
Sbjct: 301 VLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLS 359
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS--SHLNVLTALIDMYVKTGLV 61
SGL T++ + + G G+ + LH +Q S + +L +LIDMY K G +
Sbjct: 212 SGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRM 271
Query: 62 HWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
IF+ + ++VV W+ +I YA NG EAL ++MR G++ N TFVG+LSAC
Sbjct: 272 DLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSAC 331
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 58/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S ++ ++ I++ AA +F +GK LH +++G + I +Y K G
Sbjct: 108 MVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGE 167
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
RK+FD ++ + WN +IG G EA+ + M+ G++ + T V + ++
Sbjct: 168 FENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTAS 227
Query: 121 C 121
C
Sbjct: 228 C 228
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +HG+ ++ G+ ++TA +DMY K G V + +IFDS ++D V++N +I A
Sbjct: 412 GKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAH 471
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G ++ + M G K + TF+ LLSAC
Sbjct: 472 HGHEAKSFQHFEDMTEGGFKPDEITFMALLSAC 504
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 70.5 bits (171), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 62/110 (56%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +L A G+ G+ +H Y + G+ + TAL+DMY K G + ++F +
Sbjct: 306 TLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRAT 365
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+DV WN +I + + +GL +AL + +M +G K N TF+G+LSAC
Sbjct: 366 SKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSAC 415
Score = 55.5 bits (132), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A F G+ +HG I+ GL + + V L+++Y ++G RK+ D + +D
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRD 205
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASES 126
V WN L+ Y GLV EA L +M + +++ + G +A E+
Sbjct: 206 AVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEA 256
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM-KT 109
+I Y GLV +++FDS+ +DVV WN ++ YA G E L + KM K
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 110 NSSTFVGLLSACPASESI 127
+ T V +LSAC + S+
Sbjct: 303 DGFTLVSVLSACASLGSL 320
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 53/93 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +HG+ ++ GL S + ++L+DMY K G + R IFD +V+KDVV W +I Y +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ E L ++ + N TF G+L+AC
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNAC 329
Score = 69.7 bits (169), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A D +GK +HGY ++G + ++L+DMY K G + + + D D
Sbjct: 325 VLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD 384
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+V W LIG A+NG EAL + G K + TFV +LSAC
Sbjct: 385 LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 10 ASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD 69
AST L+ T GK +H + G + + L+ MY K G + RK+FD
Sbjct: 85 ASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFD 144
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+ ++D+ WN ++ YA GL+ EA L +M
Sbjct: 145 EMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
+ A G+ +S++ Y + + + +ALIDM+ K G V R +FD +D+DV
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
V+W+ +I Y +G EA+ L + M G+ N TF+GLL AC S
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+S+H +++GL ++L +L MY K G V + +FD + +++LWN +I YA+
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EA+ + +M + ++ ++ + +SAC
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISAC 333
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
K +H + +GL ++T LI G + + R++FD L + WN +I Y+RN
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+AL + M++ + +S TF LL AC
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD-- 69
T LL A + +G+ +H ++G + + V LI +Y K + R +F+
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL 180
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
L ++ +V W ++ YA+NG EAL + +MR +K + V +L+A
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
+ G+ +HG I +G S + + ALIDMY K V + IF + +DVV W LI
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
A++G +AL L M G+K N TFVGL+ AC
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYAC 349
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 59/105 (56%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
L+ A + G+ G+ +H + I ++ V ++L+DMY K GL++ + +FDS+ K+
Sbjct: 111 LVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKN 170
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ W ++ YA++G EAL L + + ++ + + ++ G + +
Sbjct: 171 TISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQS 215
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 12 TVLILLPAAGD--TGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD 69
T+L +LPA + G+ +V K +HG+ + G + + A + MY + G V R +F+
Sbjct: 253 TLLSVLPACVELNYGSSLV-KEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFE 311
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+ +DVV+W+ +I YA G E + LL +MR +G++ NS T + ++SAC S
Sbjct: 312 TSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNS 366
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ A++ T+L ++ A ++ ++H ++ G SH+ + ALIDMY K G
Sbjct: 344 MRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGS 403
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R++F L +KD+V W+ +I Y +G EAL + + M G + + F+ +LSA
Sbjct: 404 LSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSA 463
Query: 121 C 121
C
Sbjct: 464 C 464
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
F++G LH C++ G V +LI MY K + RK+FD ++ +D V + +I +
Sbjct: 63 FLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS 122
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++GL+ EA+ L+++M G S LL+ C
Sbjct: 123 CCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALC 158
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
+ AA +T N GK +H + G S V ALI MY K G + K F + K+
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V WN +I Y+++G EAL +M ++ N T VG+LSAC
Sbjct: 759 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 803
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++ + +L A + +G+ LHG +++G SS V AL+ +Y G +
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
IF ++ +D V +N LI ++ G +A+ L ++M + G++ +S+T L+ AC A
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 23 TGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCL 82
G+ G+ LH +++GL S+ + L D Y+ G ++ K+FD + ++ + WN +
Sbjct: 98 NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 83 IGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
I A L+GE L +M + + N TF G+L AC
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
+L G + F V + +H + GL V LID+Y + G V R++FD L K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
D W +I ++N EA+ L M + G+ F +LSAC ES+
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 304
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M GL ++T+ L+ A G G+ LH Y ++G +S+ + AL+++Y K
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ F ++VVLWN ++ Y + + + ++M+I+ + N T+ +L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 121 C 121
C
Sbjct: 500 C 500
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+ +G+ +H I+ + V + LIDMY K G + I KDVV W +I
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
Y + +AL ++M +G++++ +SAC
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 601
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H G SS L AL+ +Y + G + F+ D + WN L+ + +
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ 669
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASES 126
+G EAL + +M +G+ N+ TF + A ASE+
Sbjct: 670 SGNNEEALRVFVRMNREGIDNNNFTFGSAVKA--ASET 705
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 69.7 bits (169), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 60/117 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ S +++ +L + G+ +H + ++ + V + L+ MYVK G +
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +FD KD+++WN +I YA +GL EAL + +M G N T + +L+AC
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 50 ALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKT 109
A+I + + G + R++FD + D+D W +I Y R G EAL L +M+ QG++
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 110 NSSTFVGLLSACPASESI 127
+ + + +LS C S+
Sbjct: 330 SFPSLISILSVCATLASL 347
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+ +HGY I+ GL L V ++L MY++ G + G + S+ +++V WN LI A
Sbjct: 109 IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNA 168
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+NG LYL + M+I G + N TFV +LS+C
Sbjct: 169 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSC 202
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG + T + +L + D G+ +H I+IG SS + V+++LI MY K G
Sbjct: 183 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 242
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLS 119
+ K F D+D V+W+ +I Y +G EA+ L M Q M+ N F+ LL
Sbjct: 243 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 302
Query: 120 ACPAS 124
AC S
Sbjct: 303 ACSHS 307
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 1 MCW-SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
M W G+ T +L G + GK +H + ++ G ++V+ ALI MYVK G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
V R +FD + +D++ WN +I Y NG+ E L L MR + + T ++S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 120 AC 121
AC
Sbjct: 306 AC 307
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+ +G+ +H Y I G + ++V +L MY+ G K+F + KD+V W +I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
Y N L +A+ + M +K + T +LSAC
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSAC 408
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G + GK +H + ++ G+ + AL+DMYV+ G ++ F+S KDV WN L+
Sbjct: 512 GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILL 570
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
Y+ G + L +M ++ + TF+ LL C S+ +
Sbjct: 571 TGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV +L A G+ G LH I+ L S++ V LI+MY K + IF ++
Sbjct: 400 TVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI 459
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI 104
K+V+ W +I N EAL L++M++
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 69.3 bits (168), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 53/93 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK H I+ + S++ V +AL+DMY K G ++FD L ++V+ W LI Y
Sbjct: 228 GKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGY 287
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G V E L +KM+ +G + N TF+ +L+AC
Sbjct: 288 HGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 1 MCWS-GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
+ WS GL T +LL + GK +H +G + + + L+ +Y +G
Sbjct: 98 LLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSG 157
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +F SL +D++ WN +I Y + GL E L++ MR + + TF +
Sbjct: 158 DLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFR 217
Query: 120 ACPA 123
AC A
Sbjct: 218 ACSA 221
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 63/110 (57%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+L +L A D G+ +G+ + Y G++ +++ A+IDMY K+G + +F+ +
Sbjct: 252 TLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV 311
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++VV W +I A +G EAL + +M G++ N TF+ +LSAC
Sbjct: 312 NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSAC 361
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 33/143 (23%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T +L A + G+ +HG + G S ++V+T LI MY G + RK+FD +
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 72 VDKDVVLWN---------------------------------CLIGNYARNGLVGEALYL 98
+ KDV +WN C+I YA++G EA+ +
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 99 LQKMRIQGMKTNSSTFVGLLSAC 121
Q+M ++ ++ + T + +LSAC
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSAC 260
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ T +LPA GK +H + L + +L+AL+DMY K G
Sbjct: 405 GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA 464
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+IF+S+ KDVV W +I Y +G EALY +M+ G+K + T + +LSAC
Sbjct: 465 FRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSAC 521
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H C++ G V +AL+DMY K + R++F + K +V WN +I Y
Sbjct: 227 GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVA 286
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
G + +L +M I+G + + +T +L AC S ++
Sbjct: 287 KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%)
Query: 7 IASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRK 66
+ + T ++ A G G +G+ +H ++ G + V ++L+ MY K L +
Sbjct: 104 VPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQ 163
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+FD + ++DV WN +I + ++G +AL L +M G + NS + +SAC
Sbjct: 164 VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G S +T+ +L A + N + GK +HGY I+ +++ + V +LID+Y K G
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 61 VHWGRKIFDSLVDKDVVL-WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +F S KDV WN +I +Y G +A+ + +M G+K + TF +L
Sbjct: 360 ANLAETVF-SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 120 AC 121
AC
Sbjct: 419 AC 420
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
+HG I G S+L + LID+Y+K G V RK+FD + +DVV W +I ++R G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSACP 122
+AL L ++M + +K N T+ +L +C
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCK 124
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTAL----IDMYVKTGLVHWGRKIFDSLVDKDVVLWNCL 82
+G+ +HG+ ++ SS + AL IDMY K+G + F+ + +KDV W L
Sbjct: 333 TIGRQIHGFALK---SSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSL 389
Query: 83 IGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
I Y R+G +A+ L +M + +K N TF+ LLSAC
Sbjct: 390 IAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 428
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L + D G G +HG + + +L V +AL+ +Y + G + R FDS+ ++D
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+V WN +I Y N + L Q M +G K + TF LL A
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 68.9 bits (167), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 63/110 (57%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+L +L + G+ +GK +H Y + ++ V TALIDM+ K G + IF+ +
Sbjct: 232 TLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM 291
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
KD W+ +I YA +G +++ + ++MR + ++ + TF+GLL+AC
Sbjct: 292 RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNAC 341
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++ T LL A G+ LH +++GL ++ V LI+MY + V
Sbjct: 124 GILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSA 183
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +FD +V+ VV +N +I YAR EAL L ++M+ + +K N T + +LS+C
Sbjct: 184 RCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A +G+S+H + ++ + + V +AL+DMY K G + + FD + +K+
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKM--RIQGMKTNSSTFVGLLSAC 121
+V N LIG YA G V AL L ++M R G N TFV LLSAC
Sbjct: 376 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSAC 423
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
V GK +H ++ G + V + DMY KT L RK+FD + ++++ WN I N
Sbjct: 125 VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNS 184
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G EA+ + R NS TF L+AC
Sbjct: 185 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T L A D + +G LHG ++ G + ++V LID Y K + IF +
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 270
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
K+ V W L+ Y +N +A L + R ++T+ +LSAC
Sbjct: 271 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G IA +T+ +L A +G H + ++ LN AL+DMY K G
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN--NALVDMYCKCGS 308
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++F+ + ++DV+ W+ +I A+NG EAL L ++M+ G K N T VG+L A
Sbjct: 309 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 121 C 121
C
Sbjct: 369 C 369
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
+ LH I+ GL S + V +ALID++ K G +FD +V D ++WN +IG +A+N
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
AL L ++M+ G +T +L AC
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 47 VLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG 106
++ LI+MYVK L++ ++FD + ++V+ W +I Y++ + +AL LL M
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 107 MKTNSSTFVGLLSAC 121
++ N T+ +L +C
Sbjct: 158 VRPNVYTYSSVLRSC 172
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 68.9 bits (167), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 66/124 (53%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S + T++ L+ A N +G+ +HG+ I+ G S+ L+++ +L++ Y K+
Sbjct: 157 SDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKE 216
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+F + +KDV+ W+ +I Y +NG EAL + M G + N +T + +L AC A
Sbjct: 217 AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA 276
Query: 124 SESI 127
+ +
Sbjct: 277 AHDL 280
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQ-IGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
T+ + L A G+ G+ +HG+ + + L S L V ++LI MY+K G + ++FD
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
L D+V W+ ++ + +NG +A+ ++M + + + T + L+SAC
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSAC 173
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G + +TVL +L A + G+ H I+ GL + + V TAL+DMY+K
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLS 119
+F + KDVV W LI + NG+ ++ M ++ + ++ V +L
Sbjct: 315 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374
Query: 120 AC 121
+C
Sbjct: 375 SC 376
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L + + G K H Y I+ G S+ + +L+++Y + G + K+F+ + KD
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSAC 121
V+W LI Y +G +AL M + +K N TF+ +LSAC
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSAC 478
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 68.9 bits (167), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ L+ A + G G+ +HG I++ L + +ALIDMY K G++ +F +
Sbjct: 370 TMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTA 429
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+KDV LW +I A +G +AL L +M+ +G+ N+ T + +L+AC S
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHS 482
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG--LSSHLNVLTALIDMYVKT 58
M G+ TVL LL G + +GK +HG+ + G SS+L + AL+DMY K
Sbjct: 223 MVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKC 282
Query: 59 GLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
++ FD++ KD+ WN ++ + R G + A + +M
Sbjct: 283 KESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQM 326
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
F G+ LHG + GL + + AL+ MY K G + R++ + +DVV WN LIG
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
YA + +AL Q MR++G+ +N T V +LSAC
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 456
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGN-FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
MC G+ S+ + L+ A G +G+ F G +HG+ + GL S + V TA++ +Y G
Sbjct: 32 MCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 91
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
LV RK+F+ + D++VV W L+ Y+ G E + + + MR +G+ N ++ ++S
Sbjct: 92 LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVIS 151
Query: 120 AC 121
+C
Sbjct: 152 SC 153
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK LH Y + G S +V +LI MY K G + + +F+ L +++++ WN ++ A
Sbjct: 466 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 525
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+G E L L+ KMR G+ + +F LSA
Sbjct: 526 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 557
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + +++ +++ + G + +G+ + G ++ GL S L V +LI M G
Sbjct: 134 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 193
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
V + IFD + ++D + WN + YA+NG + E+ + MR + NS+T LLS
Sbjct: 194 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 252
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L AA G+ LHG +++G + A DMY K G + K+ V++ +
Sbjct: 555 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 614
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
WN LI R+G E +M G+K TFV LL+AC
Sbjct: 615 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 659
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+++TV LL G + G+ +HG +++G S + V L+ MY G +F
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ KD++ WN L+ ++ +G +AL LL M G N TF L+AC
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 68.6 bits (166), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + T++ +L + GK +H ++ + V + L+ MY+K G +
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKS 385
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSAC 121
+ IFD KD+++WN +I YA +GL EAL + +M + G K N TFV LSAC
Sbjct: 386 KLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC 443
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
F G+ LHG + GL + + AL+ MY K G + R++ + +DVV WN LIG
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
YA + +AL Q MR++G+ +N T V +LSAC
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGN-FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
MC G+ S+ + L+ A G +G+ F G +HG+ + GL S + V TA++ +Y G
Sbjct: 49 MCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 108
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
LV RK+F+ + D++VV W L+ Y+ G E + + + MR +G+ N ++ ++S
Sbjct: 109 LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVIS 168
Query: 120 AC 121
+C
Sbjct: 169 SC 170
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + +++ +++ + G + +G+ + G ++ GL S L V +LI M G
Sbjct: 151 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 210
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
V + IFD + ++D + WN + YA+NG + E+ + MR + NS+T LLS
Sbjct: 211 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK LH Y + G S +V +LI MY K G + + +F+ L +++++ WN ++ A
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 542
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+G E L L+ KMR G+ + +F LSA
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 574
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L AA G+ LHG +++G + A DMY K G + K+ V++ +
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 631
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
WN LI R+G E +M G+K TFV LL+AC
Sbjct: 632 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 676
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+++TV LL G + G+ +HG +++G S + V L+ MY G +F
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 319
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ KD++ WN L+ ++ +G +AL LL M G N TF L+AC
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 372
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
++ YVK+G++ R +FDS+ ++DVV WN ++ YA++G + EAL+ ++ R G+K N
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 111 SSTFVGLLSACPASESI 127
+F GLL+AC S +
Sbjct: 179 EFSFAGLLTACVKSRQL 195
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK-D 75
L A+ + GK +HGY I+ + + V+++LIDMY K+G + ++F DK D
Sbjct: 318 LCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHD 377
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
V WN +I A++GL +AL +L M ++ N +T V +L+AC S
Sbjct: 378 CVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHS 426
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%)
Query: 45 LNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI 104
+++ T LI Y K G + K+F + +K+ V W LI Y R G AL L +KM
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 105 QGMKTNSSTFVGLLSA 120
G+K TF L A
Sbjct: 305 LGVKPEQFTFSSCLCA 320
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 63/110 (57%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +LPA G+ +G+ LH Y G+ + +ALIDMY K G++ +F+ L
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++V+ W+ +I +A +G G+A+ KMR G++ + ++ LL+AC
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF-DSLVDK 74
+L A TG GK +HG ++ G V++ L+ MYV G + R +F ++++K
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 75 D-------------VVLWNCLIGNYARNGLVGEALYLLQKMR 103
D +VLWN +I Y R G A L KMR
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMR 235
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 30 KSLHGYCIQIGL-SSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
K +HG I+ + S+ ++V ALI +Y K+G + R +FD + + + V +NC+I YA+
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQ 424
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G EAL L Q+M G+ N TFV +LSAC
Sbjct: 425 HGHGTEALLLYQRMLDSGIAPNKITFVAVLSAC 457
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG- 59
M + G T+ +L A + + G+ HG I+ G + +V + LID Y K G
Sbjct: 231 MIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG 290
Query: 60 --LVHWGRKIFDSLVDKDVVLWNCLIGNYARN-GLVGEALYLLQKMRIQGMKTNSSTFVG 116
++ K+F ++ D+V+WN +I Y+ N L EA+ ++M+ G + + +FV
Sbjct: 291 CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC 350
Query: 117 LLSAC 121
+ SAC
Sbjct: 351 VTSAC 355
Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
++ Y K +H R++FD + D V +N LI YA A+ L ++MR G + +
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 111 SSTFVGLLSAC 121
T GL++AC
Sbjct: 140 GFTLSGLIAAC 150
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + ++ +L A G+ G+ + Y ++ + + V T L+++Y K G
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R +FDS+V+KD+V W+ +I YA N E + L +M + +K + + VG LS+
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 121 CPA 123
C +
Sbjct: 323 CAS 325
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL T ++L A + +G LH ++ G + + +T+L+ +Y +G ++
Sbjct: 106 GLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDA 165
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
K+FD + D+ VV W L Y +G EA+ L +KM G+K +S V +LSAC
Sbjct: 166 HKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 43 SHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
++L + ALIDMY K G + G ++F + +KD+V+ N I A+NG V + + +
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT 405
Query: 103 RIQGMKTNSSTFVGLLSAC 121
G+ + STF+GLL C
Sbjct: 406 EKLGISPDGSTFLGLLCGC 424
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
S T+ LL + +GK++HG+ I+ G + + A++DMY K + ++F
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVF 554
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+D++LWN +I RNG E L + +G+K + TF+G+L AC
Sbjct: 555 KEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC 607
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 64/124 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ A+ ++ +L + G + + + LH ++ G S ++++ T+++D+Y K +
Sbjct: 153 MNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV 212
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R++FD +V+ V WN ++ Y G EA+ + KM ++ + T ++ A
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLA 272
Query: 121 CPAS 124
C S
Sbjct: 273 CSRS 276
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 48/95 (50%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
V + + + + + +L I+ Y K G V R++F+ + ++D WN +I
Sbjct: 78 VQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITAC 137
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
A+NG+ E + ++M G++ ++F G+L +C
Sbjct: 138 AQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC 172
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
VGK +H +++ + + V T++ DMYVK + R++FD KD+ W + YA
Sbjct: 281 VGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYA 340
Query: 88 RNGLVGEALYLLQKM 102
+GL EA L M
Sbjct: 341 MSGLTREARELFDLM 355
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVD-KDVVLWNCLIGNY 86
+GK HG+ + G +++ V AL+DMY K G + F + + +D V WN L+
Sbjct: 413 MGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGV 472
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
AR G +AL + M+++ K + T LL+ C
Sbjct: 473 ARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGC 506
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+++ L+ + + G FV G H Y ++ L+ + V T+LID+Y K G + + RK+FD +
Sbjct: 218 SLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM 277
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+DV +N +I A +G E + L + + QG+ +S+TFV +SAC S
Sbjct: 278 SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHS 330
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+ H Y ++ L + +LIDMY K G + K+F+ L +K WN +I Y
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+GL EA+ L ++M+ G + TF+G+L+AC S
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 711
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SGL+ + TV LL A + +GK +HG+ I+ L L V +++ +Y+ G
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +FD++ DK +V WN +I Y +NG AL + ++M + G++ + + + A
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 121 C 121
C
Sbjct: 607 C 607
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
+ +T++ +LP +GK +HG+ +++ L L + AL+DMY K G +
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACP 122
+ IF +K+VV WN ++G ++ G +L++M G + V +L+A P
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE-VTILNAVP 403
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
A T+L +P K LH Y ++ + V A + Y K G + + +++
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
F + K V WN LIG +A++ +L +M+I G+ +S T LLSAC +S+
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSL 512
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+ L+ T ++ A + +G ++HG ++ GL + V AL+ Y G V
Sbjct: 181 TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ----GMKTNSSTFVGLLS 119
++FD + ++++V WN +I ++ NG E+ LL +M + + +T V +L
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 120 ACPASESI 127
C I
Sbjct: 301 VCAREREI 308
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 58/97 (59%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+S+H ++ G + + V ++L+DMY K G + + RK+FD + ++VV W+ ++ YA
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+ G EAL+L ++ + + N +F ++S C S
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANS 230
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 56/94 (59%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+ +HG I+ S V ++L+ +Y K G+ ++F+ + K++ +WN ++ YA
Sbjct: 235 LGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYA 294
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ + + L ++M++ GMK N TF+ +L+AC
Sbjct: 295 QHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL+ ST +L A G+ GK +HG I G+ S++ V ++L+DMY K G V
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREA 319
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++F+ + K+ V W+ L+G Y +NG +A+ + ++M + + F +L AC
Sbjct: 320 RQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKAC 372
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 56/94 (59%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK +HG ++ G ++ V +ALID+Y K+G + +++ + ++++ WN ++ A
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALA 439
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+NG EA+ M +G+K + +F+ +L+AC
Sbjct: 440 QNGRGEEAVSFFNDMVKKGIKPDYISFIAILTAC 473
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL A+ T+ + A + G +G+ HG I G + + + L +Y
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDA 217
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSAC 121
R++FD + + DV+ W ++ +++N L EAL L M R +G+ + STF +L+AC
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL-VH 62
S + A+ LL +F+ G H + ++ GL + NV +L+ +Y K G +
Sbjct: 55 SEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMR 114
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++FD KD + W ++ Y +AL + +M G+ N T + AC
Sbjct: 115 ETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKAC 173
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G +HG I+ + + V +LIDMY K G + + + +F+ + DV WN LI Y+
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYS 526
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+GL +AL +L M+ + K N TF+G+LS C
Sbjct: 527 THGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
LH +++G S+ V ALI+ Y G V R +F+ ++ KD+V+W ++ Y NG
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++L LL MR+ G N+ TF L A
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G + + T L A+ G F K +HG ++ V L+ +Y + G
Sbjct: 238 MRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGD 297
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ K+F+ + DVV W+ +I + +NG EA+ L +MR + N T +L+
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 121 C 121
C
Sbjct: 358 C 358
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+ LHG +++G + V ALID+Y K + K+F L K+ V WN +I Y
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
G G+A + ++ + TF L AC + S+
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ LL A G G+ +H Y ++ + V+TALIDMY K G + G +F+
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
K + WN +I A NG A+ L ++ G++ +S +F+G+L+AC S
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHS 372
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 31/137 (22%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYV------------------- 56
+ A G G G+ LHG I+ GL + ++ MYV
Sbjct: 132 VFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFD 191
Query: 57 ------------KTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI 104
K GL+ + +FD + ++ V WN +I + RNG +AL + ++M+
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQE 251
Query: 105 QGMKTNSSTFVGLLSAC 121
+ +K + T V LL+AC
Sbjct: 252 KDVKPDGFTMVSLLNAC 268
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVK--TGLVHWGRKIFDSLVD 73
LL A + + GKSLHG I+ GL + ALI MY++ TG + +F+SL
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS 370
Query: 74 KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
KD++ WN +I +A+ GL +A+ +R +K + F LL +C
Sbjct: 371 KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSC 418
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK- 74
LL + D +G+ +H + G S+ V+++LI MY K G++ RK F + K
Sbjct: 414 LLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH 473
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V WN +I YA++GL +L L +M Q +K + TF +L+AC
Sbjct: 474 STVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTAC 520
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLV-DKDVVLWNCLIGNYAR 88
K +H +++GL + + A+I Y G V +++FD L KD++ WN +I +++
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
+ L A L +M+ ++T+ T+ GLLSAC E
Sbjct: 283 HELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEE 319
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 33 HGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLV 92
H Y I+ G S + V ++D Y+K G + + +FD + +D V WN +I Y G +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 93 GEALYLLQKMRIQGMKTNSSTFVGLL 118
+A L M+ G + +F LL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLL 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL F +G+ +HG I+ G ++ V ++L+DMY K V + F + + +
Sbjct: 107 LLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPN 166
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKT-NSSTFVGLLS 119
V WN LI + + + A +LL M ++ T ++ TF LL+
Sbjct: 167 SVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHL------NVL--TALIDMY 55
+G+ A+ + ++ LL A G + V GK HG+ +G + NV+ T+LIDMY
Sbjct: 202 NGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMY 261
Query: 56 VKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFV 115
K G + R +FD + ++ +V WN +I Y++NG EAL + M G+ + TF+
Sbjct: 262 AKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFL 321
Query: 116 GLLSA 120
++ A
Sbjct: 322 SVIRA 326
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ T L ++ A+ G +G+S+H Y + G ++ AL++MY KTG
Sbjct: 312 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSS-TFVGLLSAC 121
+K F+ L KD + W +I A +G EAL + Q+M+ +G T T++G+L AC
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G T +L A + G +HG+ ++ G ++ V T L+ MY+ G
Sbjct: 98 MLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGE 157
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V++G ++F+ + +VV W LI + N +A+ ++M+ G+K N + V LL A
Sbjct: 158 VNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVA 217
Query: 121 CPASESI 127
C + I
Sbjct: 218 CGRCKDI 224
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW-GRKI 67
S+ T I+LP G+ GKS+H Y I+ GL V AL+ MY K G +
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
FD + DKDVV WN +I ++ N ++ +A M + + N +T +L C +
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + T++ LLP + + + HGY I+ GL + + L+D+Y K G +
Sbjct: 563 GMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKHA 621
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F S +D+V++ ++ YA +G EAL + M +K + +L+AC
Sbjct: 622 YSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTAC 678
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 29 GKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
G+ +H Y +Q L +H+ V +L+ Y++ G + +F + KD+V WN +I YA
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 88 RNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSAC 121
N +A L + +G + +S T + +L C
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVC 340
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ L A G G+ +H + + ++ V T LIDMY K G + +F+
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMR-IQGMKTNSSTFVGLLSAC 121
KD+V WN +I YA +G +AL L +M+ I G++ TF+G L AC
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQAC 371
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM- 107
TA+I Y K G V R +FDS+ ++D+V WN +I YA++G +AL L QK+ +G
Sbjct: 196 TAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKP 255
Query: 108 KTNSSTFVGLLSAC 121
K + T V LSAC
Sbjct: 256 KPDEITVVAALSAC 269
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T L+ L A + G GK +H + + GLS LN+ L+ MY + G + ++F +
Sbjct: 219 TCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGM 278
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+++VV W LI A NG EA+ +M G+ T GLLSAC S
Sbjct: 279 RERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHS 331
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 23 TGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCL 82
+G+ + G +HG G S ++T L+D+Y K+FD + +D V WN L
Sbjct: 126 SGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVL 185
Query: 83 IGNYARNGLVGEALYLLQKMR--IQG-MKTNSSTFVGLLSAC 121
Y RN + L L KM+ + G +K + T + L AC
Sbjct: 186 FSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQAC 227
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 61/110 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +LP G +G+ LHG+ I+ G + N+ A+IDMY K G ++ +IF+ L
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+D+V WN +I A++ A+ + ++M + G+ + + LSAC
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ ++ L A + + GK++HG+ I+ L+S + + LIDMY K G +
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSAC 121
+F ++ +K++V WN +I +G + ++L L +M G++ + TF+ ++S+C
Sbjct: 596 AMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSC 654
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G LHG + G+ ++ +L+ MY K G K+F + D V WNC+I Y
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
++GL+ E+L +M G+ ++ TF LL + E++
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
+C+ G+ ST L+ A NF L +G+ + V ++LI Y++ G
Sbjct: 130 LCF-GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ K+FD ++ KD V+WN ++ YA+ G + + MR+ + N+ TF +LS
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 121 C 121
C
Sbjct: 249 C 249
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG++ A T LLP+ N K +H Y ++ +S + + +ALID Y K
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
V + IF DVV++ +I Y NGL ++L + + + + N T V +L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPA-AGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
M G+ + T LL D G GK LH + ++ GL S+L V AL+ MY G
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
L+ R +FD +DV WN +I Y R E++ LL +M + S T + +LS
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLS 244
Query: 120 AC 121
AC
Sbjct: 245 AC 246
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 63/121 (52%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+G+I T++ +L A G+ +G+ + Y + + + + V ALIDMY K G
Sbjct: 362 AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEK 421
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+K+F + +D W ++ A NG EA+ + +M+ ++ + T++G+LSAC
Sbjct: 422 AQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNH 481
Query: 124 S 124
S
Sbjct: 482 S 482
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
T+++ YV+ G + R FD + +D + W +I Y R G E+L + ++M+ GM
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 109 TNSSTFVGLLSAC 121
+ T V +L+AC
Sbjct: 366 PDEFTMVSVLTAC 378
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +HG I G + V AL+++Y K G + + F + +KD+V WN ++ +
Sbjct: 356 GKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGV 415
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+GL +AL L M G+K ++ TF+GLL+ C S
Sbjct: 416 HGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 48 LTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
LT+ I K+G + R++FD + + D V WN ++ +Y+R GL EA+ L ++R
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 108 KTNSSTFVGLLSACPA 123
K + +F +LS C +
Sbjct: 67 KPDDYSFTAILSTCAS 82
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A G +H ++ L S + V +AL+DMY K G + + + F+++ ++
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 684
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGM-KTNSSTFVGLLSAC 121
WN +I YAR+G EAL L + M++ G + TFVG+LSAC
Sbjct: 685 SYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSAC 731
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+ + H + L + + LI+ Y++TG RK+FD + ++ V W C++
Sbjct: 15 GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIV 74
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
Y+RNG EAL L+ M +G+ +N FV +L AC
Sbjct: 75 SGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRAC 112
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 29 GKSLHGYCIQIGLSSHL-NVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
G+ +HG+ I GL + + L++MY K G + R++F + DKD V WN +I
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+NG EA+ + MR + S T + LS+C +
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+ +HG +++G+ +++V AL+ +Y +TG ++ RKIF S+ + D V WN +IG A
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Query: 88 RNGL-VGEALYLLQKMRIQGMKTNSSTF 114
R+ + EA+ + G K N TF
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVD-KDVVLWNCLIGNY 86
+GK +HG ++ ++ ALI Y K G + KIF + + +D V WN +I Y
Sbjct: 535 LGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
N L+ +AL L+ M G + +S + +LSA
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 628
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 65.9 bits (159), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ S+ LL A + G LH +++G S ++ AL+ MY K +
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 65 RKIFDSLVDK-DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++FD +K D VLWN ++ +Y+ +G E L L ++M + G NS T V L+AC
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 294
Score = 63.2 bits (152), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 57/112 (50%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
++ A+G N + G LH Y I+ G S+L V LIDMY K L + + F + DKD
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
++ W +I YA+N EAL L + + + M+ + +L A +S+
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSM 503
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTA-LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
G+ LH + S L+ L L+ MY K G + K+FD + D+ WN +IG Y
Sbjct: 99 GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG AL L MR++G+ S+F LL AC
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKAC 192
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGL-SSHLNVLTALIDMYVKTG 59
M +G ++ T++ L A +GK +H ++ SS L V ALI MY + G
Sbjct: 275 MHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG 334
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +I + + DVV WN LI Y +N + EAL M G K++ + +++
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394
Query: 120 A 120
A
Sbjct: 395 A 395
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +GL A + +L +L AA G+ +H Y ++ G ++ A++DMY G
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +FD + K ++ + +I Y +G A+ L KMR + + + +F+ LL A
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 121 C 121
C
Sbjct: 698 C 698
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A+ + ++ K +H + ++ GL + + L+D+Y K + + ++F+S+ KD
Sbjct: 493 ILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKD 551
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNS 111
VV W +I + A NG EA+ L ++M G+ +S
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADS 587
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 65.5 bits (158), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+L L+ A G F + K +H Y + + H + + L++ Y + G + + + +FDS+
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D+DVV W+ LI YA +G AL Q+M + + + F+ +L AC
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKAC 293
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
V+G S+H + ++ S+ V AL+DMY K V RK+FD + ++ V+WN +I +Y
Sbjct: 65 VLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHY 124
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
G V EA+ L + M + N S+F ++ +E
Sbjct: 125 THCGKVKEAVELYEAMDVM---PNESSFNAIIKGLVGTE 160
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+G+ + ++ +L A +G+F GK LHG+ + G S ++V ALIDMY + G V
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 64 GRKIFDSLVDKD-VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +F+ + +K +V W +I A +G EA+ L +M G+ + +F+ LL AC
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHAC 381
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
++ A + + G +H ++ GL SHL V T LI MY G V + RK+FD +
Sbjct: 111 FVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQP 170
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++V WN +I R V A + KM ++ + + G + A
Sbjct: 171 NLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKA 216
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 55 YVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF 114
Y+K G + ++IF + +D V W+ +I A NG E+ ++++ GM N +
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 115 VGLLSACPASESI 127
G+LSAC S S
Sbjct: 273 TGVLSACSQSGSF 285
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ LLP+ + N GK +H + I+ G +++ V T++ID Y K G + +++FD+
Sbjct: 368 TLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNC 427
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
D+ ++ W +I YA +G A L +M+ G K + T +LSA
Sbjct: 428 KDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSA 476
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ + A G + + + G +H I+ + L++ A+I Y K G + + R +FD +
Sbjct: 236 TVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEM 295
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+KD V + +I Y +GLV EA+ L +M G+ T ++ GL+ E I
Sbjct: 296 SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVI 351
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 2 CWSGLIASASTVLI--LLPAAGDTGNFVVG---KSLHGYCIQIGLSSHLNVLTALIDMYV 56
C+S A ++ I +L A +F +G + +HG+ I+ G S + V +I Y
Sbjct: 119 CYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYT 178
Query: 57 KTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFV 115
K + RK+FD + ++DVV WN +I Y+++G + + + M K N T +
Sbjct: 179 KCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVI 238
Query: 116 GLLSACPASESI 127
+ AC S +
Sbjct: 239 SVFQACGQSSDL 250
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 65.5 bits (158), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 1 MCW------SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDM 54
+CW + ++ T +L A + + G +HG +++ + + L+V +L+ M
Sbjct: 423 LCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSM 482
Query: 55 YVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF 114
Y K G + KIF + + ++V +N +I Y+ NG +AL L + G + N TF
Sbjct: 483 YCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTF 542
Query: 115 VGLLSAC 121
+ LLSAC
Sbjct: 543 LALLSAC 549
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+++T+ ++ A D + G +HG ++ L L + +L+ MY K G + + +F
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
+ +KD V WN LI + + EA L +KM + M
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM 372
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-M 107
++++ Y K G + R +FD + +++V+ W +I Y + G + L +MR +G +
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 108 KTNSSTFVGLLSAC 121
K NS+T + AC
Sbjct: 272 KVNSNTLAVMFKAC 285
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 65.5 bits (158), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M GL + T+ +L A +G G +HGY + G+ + TAL+DMY K G
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F ++ KD++ W +I +A +G +A+ ++M G K + F+ +L+A
Sbjct: 344 LDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTA 403
Query: 121 CPASESI 127
C S +
Sbjct: 404 CLNSSEV 410
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
+ LI YV +G ++ +++F+ + +K+VV W LI +++ G A+ +M +G+K
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 109 TNSSTFVGLLSACPAS 124
N T +LSAC S
Sbjct: 291 PNEYTIAAVLSACSKS 306
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 65.5 bits (158), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 4 SGLIASASTVLILLPAA---GDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
+G+I S T LL A D+ F H + ++ GL S V +LI Y +GL
Sbjct: 98 NGVIPSRHTFPPLLKAVFKLRDSNPF----QFHAHIVKFGLDSDPFVRNSLISGYSSSGL 153
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++FD DKDVV W +I + RNG EA+ +M+ G+ N T V +L A
Sbjct: 154 FDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA 213
Query: 121 CPASESI 127
E +
Sbjct: 214 AGKVEDV 220
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVH 62
+G+ A+ TV+ +L AAG + G+S+HG ++ G + + + ++L+DMY K
Sbjct: 198 TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD 257
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+K+FD + ++VV W LI Y ++ + + + ++M + N T +LSAC
Sbjct: 258 DAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC 316
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S + + T+ +L A G G+ +H Y I+ + + T LID+YVK G
Sbjct: 297 MLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F+ L +K+V W +I +A +G +A L M + N TF+ +LSA
Sbjct: 357 LEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSA 416
Query: 121 C 121
C
Sbjct: 417 C 417
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 65.5 bits (158), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 13 VLILLPAAGDTGNFVVGKSLHGYCIQIG--LSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
V + L A D G +G+ ++ I+ L+ L + +L++MYVK+G RK+FD
Sbjct: 170 VTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE 229
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI--QGMKT----NSSTFVGLLSACPAS 124
+ KDV + +I YA NG E+L L +KM+ Q T N TF+G+L AC S
Sbjct: 230 SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHS 289
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
+ S S + + ++ + + G+ +H ++G ++ + + T+L+ Y G V + R
Sbjct: 61 FVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYAR 120
Query: 66 KIFDSLVDK-DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++FD +K ++VLW +I Y N EA+ L ++M + ++ + LSAC
Sbjct: 121 QVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSAC 177
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
A+ T++ ++ A G GK++H Y + + L + + T+LIDMY K G + +
Sbjct: 239 ANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSV 298
Query: 68 F--DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
F S+ + D ++WN +IG A +G + E+L L KMR + + TF+ LL+AC
Sbjct: 299 FYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAAC 354
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 32/149 (21%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS---------------------- 42
GL+ T L+ ++ N +G SLH ++ GL
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 43 -------SHLNVLT--ALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVG 93
H N++T +++D Y K+G V R +FD + ++DVV W+ +I Y + G
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 222
Query: 94 EALYLL-QKMRIQGMKTNSSTFVGLLSAC 121
+AL + Q MR+ K N T V ++ AC
Sbjct: 223 KALEIFDQMMRMGSSKANEVTMVSVICAC 251
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +L A TG + K +H + + LSS + V +L+D+Y K G + +F
Sbjct: 262 TVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA 321
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKM---RIQGMKTNSSTFVGLLSAC 121
K + WN +I +A +G EA+ + ++M I +K + TF+GLL+AC
Sbjct: 322 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL-TALIDMYVKTG 59
M SG + T+ +LP GN GK H Y ++ +L +L+DMY K+G
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +++FDS+ +D V + LI Y R G AL + M G+K + T V +LS
Sbjct: 474 EIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 120 ACPAS 124
AC S
Sbjct: 534 ACSHS 538
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSH---LNVLTALIDMYVK 57
M G+ A T ++ A +F G+ +HG I +SSH L V ALI MY +
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG---SIEVSSHRCNLYVCNALISMYKR 231
Query: 58 TGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGL 117
G V R++FD + ++D V WN +I Y +GEA LL +M + G++ + T+ +
Sbjct: 232 FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTI 291
Query: 118 LSAC 121
C
Sbjct: 292 AGGC 295
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
FV G+ LH +CI GL ++ L+ Y L+ + I ++ + WN LI
Sbjct: 97 NEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLI 156
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
G+Y RN E++ + ++M +G++ + T+ ++ AC A
Sbjct: 157 GSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAA 196
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL-TALIDMYVKTG 59
M SG + T+ +LP GN GK H Y ++ +L +L+DMY K+G
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +++FDS+ +D V + LI Y R G AL + M G+K + T V +LS
Sbjct: 474 EIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 120 ACPAS 124
AC S
Sbjct: 534 ACSHS 538
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSH---LNVLTALIDMYVK 57
M G+ A T ++ A +F G+ +HG I +SSH L V ALI MY +
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG---SIEVSSHRCNLYVCNALISMYKR 231
Query: 58 TGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGL 117
G V R++FD + ++D V WN +I Y +GEA LL +M + G++ + T+ +
Sbjct: 232 FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTI 291
Query: 118 LSAC 121
C
Sbjct: 292 AGGC 295
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
FV G+ LH +CI GL ++ L+ Y L+ + I ++ + WN LI
Sbjct: 97 NEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLI 156
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
G+Y RN E++ + ++M +G++ + T+ ++ AC A
Sbjct: 157 GSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAA 196
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 2 CWSGLIAS-----ASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYV 56
C++ ++ S T +++L A + +G+ +H +++GL L V +LI+MY
Sbjct: 302 CFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC 361
Query: 57 KTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVG 116
K + R +FD++ ++D++ WN +I A+NGL EA+ L ++ G+K + T
Sbjct: 362 KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 117 LLSA 120
+L A
Sbjct: 422 VLKA 425
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++ T+ L A+ G+ +H +++ ++ V T+L+DMY K G +
Sbjct: 613 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+F + ++ WN ++ A++G E L L ++M+ G+K + TF+G+LSAC S
Sbjct: 673 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 732
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
+S HGY +IGL V AL+++Y+K G V G+ +F+ + +DVVLWN ++ Y
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 89 NGLVGEALYLLQKMRIQGMKTNSST 113
G EA+ L G+ N T
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEIT 248
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H Y I+ G L V + ++DMYVK G + + FDS+ D V W +I
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
NG A ++ +MR+ G+ + T L A
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 3 WSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
W G + +A T + + ++GK H + + ++ LI MY K G +
Sbjct: 42 WFGFLRNAIT----------SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLT 91
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGL-----VGEALYLLQKMRIQGMKTNSSTFVGL 117
+ R++FD + D+D+V WN ++ YA++ + +A L + +R + T+ T +
Sbjct: 92 YARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPM 151
Query: 118 LSAC 121
L C
Sbjct: 152 LKLC 155
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ LL A+ G+ +G+ +H Y + G + TALIDMY K G + RK+FD +
Sbjct: 253 TIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM 312
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSACPASESI 127
K + WN +I + +G EAL L ++M + ++ ++ TFVG+LSAC + ++
Sbjct: 313 QGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNV 369
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCI--QIGLSSHLNVLTALIDMYVKTGLV 61
S L+ +T++I+LPA G +H Y + Q L L V ALIDMY K G +
Sbjct: 344 SHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGV--ALIDMYSKCGSI 401
Query: 62 HWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F+ + +K + WN +IG A +GL A +L ++ +K + TFVG+L+AC
Sbjct: 402 QHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
Query: 122 PAS 124
S
Sbjct: 462 SHS 464
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+G+ ++ ++L A G G +HG+ + GL S L + LI +Y+K G +
Sbjct: 115 NGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGL 174
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ 105
R++FD + +D V +N +I Y + GL+ A L M ++
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME 216
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + T L A G G +HG+C++IG + V +L+DMY K G
Sbjct: 98 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 157
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF--VGLL 118
++ K+F +VD+ ++ WN +I + G +AL M+ +K F LL
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 119 SACPAS 124
AC ++
Sbjct: 218 KACSST 223
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGL--SSHLNVLTALIDMYVKTGLVHWGRKIFD 69
T+ LL A TG GK +HG+ ++ G S + +L+D+YVK G + RK FD
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF 114
+ +K ++ W+ LI YA+ G EA+ L + R+Q + + +F
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFK--RLQELNSQIDSF 314
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK + +++ +VL +++DMY+K GLV K F + KDV+ W +I Y +
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+GL +++ + +M ++ + ++ +LSAC S
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTA--LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
G +H Y ++ G S LN++T+ LIDMY K K+FDS+ +++VV W+ L+ +
Sbjct: 25 GGQVHCYLLKSG--SGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG + +L L +M QG+ N TF L AC
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC 117
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L A G+ K +H I G+ + + +AL+D+Y K G + R++F S+ DV
Sbjct: 172 LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDV 231
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+WN +I +A +GL EA+ + +M + + +S TF+GLL+ C
Sbjct: 232 SIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTC 276
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+ T + +L A D V G+ +H + + V +AL++MY K+G + RK+F
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF 389
Query: 69 DS--LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D+ + +D++ WN +I YA +G EA+ + +MR G K ++ T++ LL AC
Sbjct: 390 DNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFAC 444
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
TA++D K G V R++FD + +++++ WN +I YA+N + EA L Q M
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM 259
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G +H I+ L +ALI MY K G + ++F+S+ + D+V W I +A
Sbjct: 405 IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHA 464
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G EAL L +KM GMK NS TF+ +L+AC
Sbjct: 465 YYGNASEALRLFEKMVSCGMKPNSVTFIAVLTAC 498
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 3 WSGLIAS-----ASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVK 57
+SG++AS +S LL + + G+ +H + I+ GL S+ ++ T +++MYVK
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 58 TGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGL 117
G + +++FD + K V L+ Y + G +AL L + +G++ +S F +
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVV 291
Query: 118 LSACPASESI 127
L AC + E +
Sbjct: 292 LKACASLEEL 301
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
++L A +GK +H ++GL S ++V T L+D Y+K + F + +
Sbjct: 290 VVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREP 349
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKT-NSSTFVGLLSAC 121
+ V W+ +I Y + EA+ + +R + NS T+ + AC
Sbjct: 350 NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQAC 397
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ ++L + + N + GKS HGY ++ G S N+ ALIDMY+K
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 390
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+IFD + +K VV WN ++ Y NG V A + M + + + ++ GL+
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 124 SESI 127
E+I
Sbjct: 451 EEAI 454
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +HG +++G + L V +L+ Y + G + RK+FD + +++VV W +I YAR
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 89 NGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSACPASESI 127
+A+ L +M R + + NS T V ++SAC E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ A T++ + A G G + K ++ Y + G+ + + T L+DM+ + G
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPES 523
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
IF+SL ++DV W IG A G A+ L M QG+K + FVG L+AC
Sbjct: 524 AMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 59/116 (50%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ ++ A + G+ ++ + G+ + +++AL+DMY+K + +++FD
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
++ L N + NY R GL EAL + M G++ + + + +S+C +I
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNI 353
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S ++ +T L+ LP +GK +H ++ G S L + ALI+MY K G
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 559
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++F+ + +DVV W +I Y G +AL M G+ +S F+ ++ A
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Query: 121 CPAS 124
C S
Sbjct: 620 CSHS 623
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G ++ + +G S L V AL+DMY + GL+ R++FD + +D+V WN LI Y+
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+G EAL + +++ + +S T +L A
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV +L A G + + K ++ Y ++ G V LID+Y K G + R +F+S+
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
KD V WN +I Y ++G + EA+ L + M I + + T++ L+S
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T L+L+ + + GK LH I+ G+ L+V ALIDMY K G V KIF S+
Sbjct: 410 TYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM 469
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D V WN +I R G L + +MR + + +TF+ L C
Sbjct: 470 GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S ++ + TV +LPA G+ G+ LHG+ ++ G++S + V L+ MY+K
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++FD + +D V +N +I Y + +V E++ + + + K + T +L AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRAC 317
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ LL A+ N +G +H ++ + + V ALI MY + G + R+IFD +
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEM 469
Query: 72 -VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ ++V+ WN +IG YA +G EAL L M+ G+ + TFV +L+AC
Sbjct: 470 KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNAC 520
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 51 LIDMYVKTGLVHW---GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+I YV G + + RK+FD + +D WN +I YA+N +GEAL L +KM
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKM 162
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLN-------VLTALID 53
M SG+ + T++ +L G + GK +H Y I+ + N V+ LID
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 54 MYVKTGLVHWGRKIFDSLV--DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNS 111
MY K V R +FDSL ++DVV W +IG Y+++G +AL LL +M + +T
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 112 STFV 115
+ F
Sbjct: 476 NAFT 479
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +LP G +GK LH + + + ++ V L+DMY K G++ +F ++
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
KDVV WN ++ Y++ G +A+ L +KM+ + +K + T+ +S
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSS-HLNVLTALIDMYVKTGLVHWGRK 66
+A T+ L A +GK +H Y ++ ++ L V LIDMY K G + R
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+FD+++ K+ V W L+ Y +G EAL + +MR G K + T + +L AC S
Sbjct: 535 VFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T + A G+ + G+S H + G S++ V AL+ MY + + RK+FD +
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
DVV WN +I +YA+ G AL + +M + G + ++ T V +L C
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G AS ++ LL +G+ G + + LHGY + G S+ + +L+ Y + +
Sbjct: 50 GEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDA 109
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
K+FD + D DV+ WN L+ Y ++G E + L ++ + N +F L+AC
Sbjct: 110 HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAAC 166
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +H ++GL S + V +ALIDMY K G++ +F ++ K++++WN +I YAR
Sbjct: 339 GSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYAR 398
Query: 89 NGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSACPASE 125
NG EA+ L +++ + +K + TF+ LL+ C E
Sbjct: 399 NGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCE 436
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSH-LNVLTALIDMYVKTGLVHWGRKIFD 69
+TV+ + GD G+++HGY +++ + S L V+ ++IDMY K GL +F
Sbjct: 394 ATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFK 453
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM--RIQGMKTNSSTFVGLLSACPASESI 127
+ +D+V WN +I +++NG +A L +++ K + ST + +L++C +S+S+
Sbjct: 454 TTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSL 513
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS--SHLNVLTALIDMYVKT 58
M SG A T ++ A +G+SLHG I+ G S +H++V ++I MY K
Sbjct: 280 MTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKC 339
Query: 59 GLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR-IQGMKTNSSTFVGL 117
G +F+ LV +DV+ N ++ +A NG+ EA +L +M+ + ++ + +T V +
Sbjct: 340 GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSI 399
Query: 118 LSAC 121
S C
Sbjct: 400 TSIC 403
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T + LL A+ G+ G H + I+ G ++ V AL+DMY G++ G K+F +
Sbjct: 681 TFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNS 740
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSACPAS 124
+ WN +I + +G+ +A+ L +++ M+ N S+F+ LLSAC S
Sbjct: 741 GVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHS 794
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+L + A+G+ G + G+ HG I+ + LI MY + + K+F +
Sbjct: 583 TLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLI 642
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
D ++ WNC+I ++N E L + ++++ N TFVGLLSA
Sbjct: 643 SDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSA 688
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
LH I+ GL ++ AL+++Y K + +F + +D+V WN ++ NG
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
++L + M G + ++ TF ++SAC + E +
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEEL 305
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ ++L + + N + GKS HGY ++ G S N+ ALIDMY+K
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+IFD + +K VV WN ++ Y NG V A + M + + + ++ GL+
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQG 447
Query: 121 CPASESI 127
E+I
Sbjct: 448 SLFEEAI 454
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +HG +++G + L V +L+ Y + G + RK+FD + +++VV W +I YAR
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 89 NGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSACPASESI 127
+A+ L +M R + + NS T V ++SAC E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ A T++ + A G G + K ++ Y + G+ + + T L+DM+ + G
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPES 523
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
IF+SL ++DV W IG A G A+ L M QG+K + FVG L+AC
Sbjct: 524 AMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 57/110 (51%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ ++ A + G+ ++ + G+ + +++AL+DMY+K + +++FD
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ L N + NY R GL EAL + M G++ + + + +S+C
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTG 59
M GL +V L A G GK +H + + + S + V TAL+DMY K G
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCG 268
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLL 118
+ ++F L ++V W LIG YA G +A+ L+++ R G+K +S +G+L
Sbjct: 269 CIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVL 328
Query: 119 SAC 121
+AC
Sbjct: 329 AAC 331
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 26 FVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
F VGK +H + ++ G+ S +V T ++ +YV+ L+ RK+FD + DVV W+ L+
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMN 191
Query: 85 NYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
Y R GL E L + ++M ++G++ + + L+AC
Sbjct: 192 GYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTAC 228
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLT-ALIDMYVKTG 59
M SG+ + T+ +L + G G GKS+HG+ ++ L + L+ AL+++Y + G
Sbjct: 294 MIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECG 353
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ + + D+++V WN LI YA G+V +AL L ++M Q +K ++ T +S
Sbjct: 354 KLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSIS 413
Query: 120 AC 121
AC
Sbjct: 414 AC 415
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + A T+ + A + G +GK +HG+ I+ +S V +LIDMY K+G
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGS 454
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V +F+ + + VV WN ++ +++NG EA+ L M ++ N TF+ ++ A
Sbjct: 455 VDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQA 514
Query: 121 CPA 123
C +
Sbjct: 515 CSS 517
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
+L AG + VG +HG I+ G+ + T+L+ MY +TG + K+FD + +
Sbjct: 106 VLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVR 165
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D+V W+ L+ + NG V +AL + + M G++ ++ T + ++ C
Sbjct: 166 DLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGC 212
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S L + T L ++ A G+ GK +H I GL L TALIDMY K G
Sbjct: 496 MYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYAKCGD 554
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++ +F ++ + +V W+ +I Y +G +G A+ +M G K N F+ +LSA
Sbjct: 555 LNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSA 614
Query: 121 CPASESI 127
C S S+
Sbjct: 615 CGHSGSV 621
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ A T++ ++ + G + +S+HG + + +L+ MY K G
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGD 252
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +IF+ + K+ V W +I +Y R +AL +M G++ N T +LS+
Sbjct: 253 LLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
Query: 121 C 121
C
Sbjct: 313 C 313
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
++ A T+ LL T + ++G H Y ++ G + ALI+MY + G +
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSAC 121
++F+ + +KDVV WN LI Y+R+G A+ + M+ +G + +++TF +LSAC
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T L + G +G +HG I+ G + V A + MY K+F+SL
Sbjct: 290 TDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESL 349
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+KD+V WN +I +Y + L A+ + ++M I G+K + TF LL+
Sbjct: 350 EEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLA 397
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T +L D +G + G+ +++ L +V A I M+ G + RK+FD
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+D+V WNCLI Y + G +A+Y+ + M +G+K + T +GL+S+C
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSC 267
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 31/149 (20%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ T++ L+ + G+ GK + Y + GL + ++ AL+DM+ K G +H
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 64 GRKIFDSLV-------------------------------DKDVVLWNCLIGNYARNGLV 92
R+IFD+L +KDVVLWN +IG +
Sbjct: 311 ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG 370
Query: 93 GEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+AL L Q+M+ K + T + LSAC
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSAC 399
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ L A G VG +H Y + LS ++ + T+L+DMY K G + +F +
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ + + +IG A +G A+ +M G+ + TF+GLLSAC
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC 500
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
F G+ +HG + G + LID+Y K G R +FD+L + DV+ N +I +
Sbjct: 384 FEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYS 443
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
YA+NG EAL L ++M G++ N T + +L AC S
Sbjct: 444 YAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNS 482
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 33 HGYCIQIGLS-SHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
HG + +GL S++ V +AL+DMYVK G + + D + +KDVVL LI Y++ G
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
EA+ Q M ++ ++ N T+ +L +C
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISC 277
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
++VLI D GN GK +HG ++ G S L T+L+ MY++ LV ++F
Sbjct: 271 ASVLISCGNLKDIGN---GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKC 327
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ + V W LI +NG AL +KM +K NS T L C
Sbjct: 328 IEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 62.8 bits (151), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
A+ T + +L A D G +G+ +H + + V ALI+MY + G ++ R++
Sbjct: 253 ANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRV 312
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
F + DKDV+ +N +I A +G EA+ + M +G + N T V LL+AC
Sbjct: 313 FRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 366
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G +S S L ++ G +G V K + ++ H+ T +I+ Y + G +
Sbjct: 153 GFGSSRSVGLKMMEIYGKSGELVNAKKMFD---EMPDRDHV-AATVMINCYSECGFIKEA 208
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F + KD V W +I RN + +AL L ++M+++ + N T V +LSAC
Sbjct: 209 LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
V + +H +++G S +V ++++Y K+G + +K+FD + D+D V +I Y+
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 88 RNGLVGEALYLLQKMRIQ 105
G + EAL L Q ++I+
Sbjct: 201 ECGFIKEALELFQDVKIK 218
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G + G+ H ++IG S L+ ALI MY K G+V R++F ++ D V WN LI
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALI 490
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++G EA+ + ++M +G++ + T + +L+AC
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQI-GLSSHLNVLTALIDMYVKTG 59
M SG+ T ++ A G +GK +H Y ++ S H + +L+ +Y K G
Sbjct: 277 MVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD--NSLVSLYYKCG 334
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
R IF+ + KD+V WN L+ Y +G +GEA + ++M+ + +
Sbjct: 335 KFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ + +L A G G+ +H Y + G+ ++ TA++DMY K G +
Sbjct: 300 SGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIET 359
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+IF+ + K+V WN L+G A +G E+L ++M G K N TF+ L+AC
Sbjct: 360 ALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNAC 417
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
+T + +L ++G G +GK +HG ++ L ALIDMYVK + ++F
Sbjct: 205 ATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGE 264
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSACPA 123
L KD V WN +I EA+ L M+ G+K + +LSAC +
Sbjct: 265 LEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACAS 318
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+G T + A G GK +HG ++G + V +L+ Y G
Sbjct: 100 NGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRN 159
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
K+F + +DVV W +I + R GL EAL KM ++ N +T+V +L
Sbjct: 160 ACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE---PNLATYVCVL 211
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%)
Query: 22 DTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNC 81
D G +GK +HGY + + + TAL+DMY K G + IFD + DK V WN
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 82 LIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
+I A NG +AL + + M+ + N T + +L+AC S+
Sbjct: 295 IISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSK 338
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL-VDKDVVLWNCLIGNYA 87
GK +HG ++ G ++V ALI MY K G + + FD + ++D V W +I A
Sbjct: 432 GKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALA 491
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++G EAL L + M ++G++ + T+VG+ SAC
Sbjct: 492 QHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 48 LTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
TAL+D Y+K G ++ + IF SL D+DVV W +I Y ++G GEA+ L + M G
Sbjct: 350 FTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ 409
Query: 108 KTNSSTFVGL 117
+ NS T +
Sbjct: 410 RPNSYTLAAM 419
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + T+ +L + T GK +H + +++GL +++V +L++MY K G
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGL 117
+ +FD +V +D+ WN +I + + G + A+ ++M + + T +S G
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 26 FVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
F VGK +H + ++ G+ S +V T ++ +YV+ L+ RK+FD + DVV W+ L+
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMN 191
Query: 85 NYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
Y R GL E L + ++M ++G++ + + L+AC
Sbjct: 192 GYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTAC 228
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTG 59
M G+ +V L A G GK +H + + + S + V TAL+DMY K G
Sbjct: 209 MLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCG 268
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLL 118
+ ++F+ L ++V W LIG YA G +A L ++ R G+K +S +G+L
Sbjct: 269 CIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVL 328
Query: 119 SAC 121
+AC
Sbjct: 329 AAC 331
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ ++S + L + +G+ +H + L + + LT+LI MY K G
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ K+F+ + KDVV WN +I YA++G +AL L ++M ++ + TFV +L A
Sbjct: 335 LGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
Query: 121 C 121
C
Sbjct: 395 C 395
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ A T +L A G+T + G+ +HG S L V ALI MY +
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
+ R++FD + ++D V WN +I YA G+ EA L KM G++ +
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVS 244
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL-TALIDMYVKTG 59
M +G ++ T+ +LP N GK H Y ++ +L +L+D+Y K+G
Sbjct: 372 MLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSG 431
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +++ D + +D V + LI Y G G AL L ++M G+K + T V +LS
Sbjct: 432 KIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLS 491
Query: 120 ACPASE 125
AC S+
Sbjct: 492 ACSHSK 497
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL A D F+ G +H +CI G+ H ++ L+ Y L + + I ++
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ WN LI +YA+N L E + ++M +G++ ++ T+ +L AC
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKAC 154
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%)
Query: 13 VLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLV 72
++I L A G +GK +HG I NV LI MY K + +F
Sbjct: 283 MIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE 342
Query: 73 DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ + WN +I YA+ EA +LL++M + G + NS T +L C
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLC 391
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ + T++ LL + +G LH I S + V ALIDMY K G +
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F+ + +DV+ WN +I Y +G EA+ +KM G++ N+ TF+GLL C
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGC 319
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 31 SLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNG 90
+HG I+ G V T+L+ Y G V K+FD + +D+V WN +I ++ G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 91 LVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
L +AL + ++M +G+ +S T V LLS+C
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSC 218
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ S+ V +L A G N V GK +H ++ GL + V T L+ +Y + G +
Sbjct: 98 SGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIEL 157
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+K FD + +K+ V WN L+ Y +G + EA + K+
Sbjct: 158 AKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI 196
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ ++ A GN G + Y + G+ + T+LID+Y+K G K+F +L
Sbjct: 333 TLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNL 392
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
KD V ++ +I NG+ EA L M + + N TF GLLSA
Sbjct: 393 NKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSA 441
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
+F G+ LHG+ I+ G+ L+V ALI +Y K G + IFD ++++D V WN +I
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 85 NYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++N L ++M K + TFV +LS C
Sbjct: 368 AHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLC 401
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 56/104 (53%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A G G+ +G+++H ++ G + VL AL+ MY K G + R +FD + KD
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
V WN ++ Y +GL+ EAL + + M G++ + +L+
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA 304
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S ++ T I L A GK++H + I G + L V +L MY + G
Sbjct: 200 MSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGE 259
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ G +F+++ ++DVV W LI Y R G +A+ KMR + N TF + SA
Sbjct: 260 MQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSA 319
Query: 121 CPA 123
C +
Sbjct: 320 CAS 322
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG + + LL +G+ G+ +H + GL + V ++LI+MY K G
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ IF D+V +I YA +G EA+ L +K G + +S TF+ +L+A
Sbjct: 462 IKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTA 521
Query: 121 CPAS 124
C S
Sbjct: 522 CTHS 525
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
S + ++L A G + N G+SLH Y ++ L S + V ++L+DMY + G + ++F
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSE 168
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ ++ V W +I G E L +M +++ TF L AC
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC 219
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S + + T + A V G+ LH + +GL+ L+V +++ MY G +
Sbjct: 304 SQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVS 363
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+F + +D++ W+ +IG Y + G E MR G K LLS
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLS 419
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG V I+L + + + V GK +H Y I++GL + V +ALIDMY K GL+
Sbjct: 302 SGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKC 361
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F + +K++V +N LI +G A ++ G+ + TF LL C
Sbjct: 362 AMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTC 419
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 22 DTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNC 81
D +V S+H +C++I L SH V AL++MY + + +F+S+ + D+V +
Sbjct: 219 DPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSS 278
Query: 82 LIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
LI Y+R G EAL+L ++R+ G K + +L +C
Sbjct: 279 LITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
+ +HG I GL +A++ Y K GL+ K+F S+ D D+ LWN +I Y
Sbjct: 126 RCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCC 185
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
G + + L M+ +G + N T V L S
Sbjct: 186 GFWDKGINLFNLMQHRGHQPNCYTMVALTS 215
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
A D G+ H I+ G ++V AL+DMY K G IF + D+
Sbjct: 512 ACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKC 571
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
WN ++G Y+++G+V +AL +++ G ++ T++ LL+AC
Sbjct: 572 WNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAAC 614
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN-GLVGEALYLLQKMRIQGMKT 109
LI MYV+ G + RK+FD + ++VV +N L Y+RN A L M + +K
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKP 197
Query: 110 NSSTFVGLLSACPASESI 127
NSSTF L+ C E +
Sbjct: 198 NSSTFTSLVQVCAVLEDV 215
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
+ A + FV GK LHG ++G + V T L+ MY K +K+FD + ++DV
Sbjct: 409 ISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDV 468
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VLW +I ++R G A+ +M + +++ + ++ AC
Sbjct: 469 VLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 62/121 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + + ++ST L+ + ++G SL+ I++G S ++ V T+++ MY G
Sbjct: 190 MAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGD 249
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R+IFD + ++D V WN +I +N + + L + M + G+ T+ +L+
Sbjct: 250 LESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNG 309
Query: 121 C 121
C
Sbjct: 310 C 310
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ + T I+L G++ +GK +H I + L + AL+DMY G
Sbjct: 291 MLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD 350
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQK-MRIQGMKTNSSTFVGLLS 119
+ +F + + ++V WN +I + NG +A+ + ++ +R+ + + TF +S
Sbjct: 351 MREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Query: 120 ACPASE 125
A E
Sbjct: 411 ATAEPE 416
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLV-DKDVVLWNCLIGNYA 87
G+ +HG+ I+ G +NV+ L+ MY + + +F+++ +K+ V W ++ Y+
Sbjct: 144 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYS 203
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+NG +A+ + +R +G ++N TF +L+AC +
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACAS 239
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A+ + G+ +HG I+ G S L+V +L+ MY K G + IF+S+ +D
Sbjct: 436 VLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRD 495
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMR 103
++ W CLI YA+NGL+ +A MR
Sbjct: 496 LITWTCLIVGYAKNGLLEDAQRYFDSMR 523
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+ S H ++ G +++ V AL+DMY K G++ K+F+ +++KDV+ W L+
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNT 406
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
NG EAL L MR+ G+ + +LSA
Sbjct: 407 HNGSYDEALKLFCNMRVGGITPDKIVTASVLSA 439
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
VG +H ++ G +++ V +ALIDMY K + R + + + DVV WN +I
Sbjct: 245 VGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCV 304
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
R GL+GEAL + +M + MK + T +L+
Sbjct: 305 RQGLIGEALSMFGRMHERDMKIDDFTIPSILN 336
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G++ A T L + F++G L ++ GL S L V + I MY ++G
Sbjct: 165 MKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS 224
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVG-EALYLLQKMRIQGMKTNSSTFVGLLS 119
R++FD + KD++ WN L+ ++ G G EA+ + + M +G++ + +F +++
Sbjct: 225 FRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVIT 284
Query: 120 AC 121
C
Sbjct: 285 TC 286
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + G+ + T + L+ A G +HG CI+ G S +V + I +Y K
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEA 422
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +K F+ + ++++ WN +I +A+NG EAL + + M N TF +L+A
Sbjct: 423 LEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNA 481
Query: 121 CPASESI 127
+E I
Sbjct: 482 IAFAEDI 488
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ H + +++GL+S V +AL+DMY K G + K+F+ + K+ +W +I Y+
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G + L KM + + + TF+ +L+AC
Sbjct: 553 HGDFETVMNLFHKMIKENVAPDLVTFLSVLTAC 585
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+ + +HG CI+ G S L V L+ Y K G++ + +F + +++VV W +I +
Sbjct: 294 LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK 353
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+A+ + MR G+ N TFVGL++A +E I
Sbjct: 354 -----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQI 388
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+ G +HG+ G +S + V A++ MY K G IF++LVD DVV WN ++
Sbjct: 90 GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTIL 149
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
+ N + AL + +M+ G+ ++ T+ LS C SE
Sbjct: 150 SGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSE 188
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 60.1 bits (144), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ +L A G G GK +H Y + + + + TALIDMY K G + +++F++L
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 72 -VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
KDV ++ +I A GL E L +M + NS TFVG+L AC
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC 312
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 42 SSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQK 101
S L ++++ Y K GL+ RK+FD + +++V+ W+CLI Y G EAL L ++
Sbjct: 125 SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 102 MRIQG-----MKTNSSTFVGLLSAC 121
M++ ++ N T +LSAC
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSAC 209
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T LLP+ + + +G+ H + GL V T+L++MY G + +++FD
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
KD+ WN ++ YA+ GL+ +A L +M
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEM 154
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQ---IGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
T+ +L A G+ +G H + ++ + ++ + V +LI+MY K G + ++F
Sbjct: 253 TMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVF 312
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM--RIQGMKTNSSTFVGLLSAC 121
+ +D+ WN +I +A +G EA+ +M + + ++ NS TFVGLL AC
Sbjct: 313 QGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIAC 367
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T +L A F GK +H ++ G + V LI +Y G + RK+FD +
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 212
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
++ +V WN +I R G AL L ++M+ + + + T +LSAC S+
Sbjct: 213 PERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSL 267
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 14 LILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVD 73
LIL A V+GK LH I+ G+ S + V ++LI MY K G V RK+FD + +
Sbjct: 50 LILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPE 109
Query: 74 KDVVLWNCLIGNYARNG 90
++V WN +IG Y NG
Sbjct: 110 RNVATWNAMIGGYMSNG 126
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G A TV +L A +G VG+ +H G+ + V ALIDMY K G
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F+S+ + V N +I A +G EAL + M +K + TF+ +L+A
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 121 C 121
C
Sbjct: 385 C 385
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 55 YVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF 114
Y + G VH R IF + +D+V+WN LI YA+NG +A+ M+ +G + ++ T
Sbjct: 218 YFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTV 277
Query: 115 VGLLSACPAS 124
+LSAC S
Sbjct: 278 SSILSACAQS 287
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 58.9 bits (141), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 1 MCW-SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
MC + L A S ++ L A +TG +G S+HG+ ++ ++ V T+L+DMYVK G
Sbjct: 224 MCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCG 283
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ IF + ++ + ++ +I A +G AL + KM +G++ + +V +L+
Sbjct: 284 CLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLN 343
Query: 120 ACPAS 124
AC S
Sbjct: 344 ACSHS 348
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +HG ++GL + + V +LI+MY + G + +F+ L K W+ ++ A
Sbjct: 151 GKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAG 210
Query: 89 NGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
G+ E L L + M + +K S V L AC
Sbjct: 211 MGMWSECLLLFRGMCSETNLKAEESGMVSALLAC 244
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGL-SSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
T+L +LPA + G+ + S+H Y + G + V +LID Y K G + K F
Sbjct: 258 TILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIE 317
Query: 71 LVD--KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ + K++V W +I +A +G+ EA+ + + M G+K N T + +L+AC
Sbjct: 318 IPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNAC 370
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 38 QIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALY 97
++G SH+ V TAL+ MY+ G + K+FD + +++ V WN +I G +AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 98 LLQKM 102
L+KM
Sbjct: 211 FLEKM 215
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L D + +GK +H ++ G S + L+DMY K G + R IF ++ K V
Sbjct: 288 LAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSV 347
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQ--GMKTNSSTFVGLLSAC 121
V W +I YA NG +AL + ++M + G+ NS TF+ ++SAC
Sbjct: 348 VSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISAC 394
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H I+ G + TALIDMY K G + ++F+S+ +KD+V WN L+ + R
Sbjct: 103 GRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR 162
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
NG EAL + M + ++ + T ++ C +
Sbjct: 163 NGKGKEALGVFAAMYRERVEISEFTLSSVVKTCAS 197
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGL-----SSHLNVL--TALIDMYVKTGLVHWG 64
T+ +L A +GN VVG+ +H Y ++ + +S+ +V+ TAL+DMY K G +
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSS 305
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+F + ++VV WN L A +G + + +M I+ +K + TF +LSAC S
Sbjct: 306 MNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHS 364
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 32/124 (25%)
Query: 33 HGYCIQIGLSSHLNVLTALIDMYVKTGLV--------------------------HW--- 63
HG +++G+ + + V AL+DMY K GLV W
Sbjct: 134 HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGL 193
Query: 64 --GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSA 120
GR++F + +++ V W ++ Y G E L LL +M + G N T +LSA
Sbjct: 194 ERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSA 253
Query: 121 CPAS 124
C S
Sbjct: 254 CAQS 257
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G + T L ++ A G+ G+ +HG ++ G+ + V+ A I+ Y KTG +
Sbjct: 129 GFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSS 188
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACP 122
K+F+ L K++V WN +I + +NGL + L R G + + +TF+ +L +C
Sbjct: 189 CKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G +T L +L + D G + + +HG + G S + + TAL+D+Y K G +
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+F + D + W ++ YA +G +A+ + M G+ + TF LL+AC S
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ--GMK 108
L+ Y++ G K+FD + ++D+V WN LI Y+ G +G+ +L +M I G +
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 109 TNSSTFVGLLSAC 121
N TF+ ++SAC
Sbjct: 132 PNEVTFLSMISAC 144
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 59/117 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G + ++L + + + K +H + +Q + +I M+ + +
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++FD +VDKD+ W+ ++ Y+ NG+ +AL+L ++M G+K N TF+ + AC
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLAC 347
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G H I+ GL + + + T+L+DMY K G V R++FD +V++D+V+W +I A
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 89 NGLVGEALYLLQKM 102
N EAL L + M
Sbjct: 293 NKRQWEALGLFRTM 306
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQ-IGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
+LP GD +GK +H + ++ V + LID+Y K G + GR++F +
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ + W L+ YA NG +AL + M+ +G + + T +L C +I
Sbjct: 382 NAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAI 434
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G T+ +LP + GK +H Y ++ +++++T+L+ MY K G+
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++FD L ++V W +I Y N + + + + M + + +S T +L+
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 121 C 121
C
Sbjct: 529 C 529
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L D +GK LHG+ ++ S V +I MY K G + FD++ K
Sbjct: 525 VLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKG 584
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ W +I Y N L +A+ ++M +G N+ TF +LS C
Sbjct: 585 SLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSIC 630
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 31/141 (21%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T LL A G + +G+ H ++ + V +IDMYVK + RK+FD +
Sbjct: 151 TFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEM 210
Query: 72 VDKDVVLWNCLIGNYAR-------------------------------NGLVGEALYLLQ 100
++DV+ W LI YAR N EAL
Sbjct: 211 PERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFD 270
Query: 101 KMRIQGMKTNSSTFVGLLSAC 121
+M G++ + T G +SAC
Sbjct: 271 RMEKSGIRADEVTVAGYISAC 291
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 42 SSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQK 101
S H+ + +ALIDMY K G V +F S+ +K+V ++ +I A +G EAL+L
Sbjct: 315 SDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHY 374
Query: 102 MRIQ-GMKTNSSTFVGLLSACPAS 124
M Q +K N+ TFVG L AC S
Sbjct: 375 MVTQTEIKPNTVTFVGALMACSHS 398
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTG--LVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
K +HG+ ++ GL +LT LI K G + + R++ + + ++ LW +I YA
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G EA+ + MR + + S TF LL AC
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKAC 159
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 17 LPAAGDTGNFVVGKSLHGYC--IQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
L A G GK +H Y +I + S L + LIDMY K G + ++F ++ K
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV--LIDMYAKCGEMEEALEVFKNIKKK 311
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V W LI YA +G EA+ +M+ G+K N TF +L+AC
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 61/110 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +L A G + +G + Y + + + + +LI MY + G + +++FD +
Sbjct: 400 TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++DVV +N L +A NG E L LL KM+ +G++ + T+ +L+AC
Sbjct: 460 KERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTAC 509
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
T +I + K + RK FD + +K VV WN ++ YA+NG +AL L M G++
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 109 TNSSTFVGLLSAC 121
N +T+V ++SAC
Sbjct: 262 PNETTWVIVISAC 274
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 38 QIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALY 97
++G +L A+I Y + G + R++FD++ ++VV WN LI YA NG A+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 98 LLQKMRIQG-MKTNSSTFVGLLSAC 121
+ M G K + T + +LSAC
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSAC 408
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +H I++G V T+L++MY KTG V +F KD++ WN +I AR
Sbjct: 354 GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLAR 413
Query: 89 NGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
N E+L + ++ + Q +K + T +G+L AC
Sbjct: 414 NSRAVESLAIFNQLLMNQSLKPDRVTLMGILVAC 447
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 29 GKSLHGYCIQIGLSSH-LNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
G+ +HG I G+S + L V +++DMY + G+ + +F ++ D+DVV WNCLI + +
Sbjct: 152 GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 88 RNG---LVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+G + + +L+++M IQ + S V + S
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICS 246
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV +++ D GK CI++G S+ VL A IDM+ K + K+F L
Sbjct: 237 TVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
D VL N +IG+Y+ + +AL L Q ++ + TF +LS+ A
Sbjct: 297 EKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLT----ALIDMYVKTGLVHWGRK 66
T+L LL A G+ GK LH Y ++ +SS + V T ALIDMY K G + +
Sbjct: 277 TILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIE 336
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+F + D+D+ WN LI A + G ++ + ++M+ + N TF+G++ AC S
Sbjct: 337 VFRGVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHS 393
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++FD +KDVV WN +I Y G EAL + ++MR G + T + LLSAC
Sbjct: 228 ARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA- 87
G+ +HG I+ G + + + ALID Y K G + R FD + DK++V WN L+ YA
Sbjct: 335 GRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN 394
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
++G + +L+L +M G + TF L +C +E
Sbjct: 395 KDGPICLSLFL--QMLQMGFRPTEYTFSTALKSCCVTE 430
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTG 59
M S + T + +L + +G S+HG + S + V LIDMY K G
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ K+F+ +K+++ W LI +G EAL ++ G K + +F+ +L+
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
Query: 120 AC 121
AC
Sbjct: 656 AC 657
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 13 VLILLPAAGDTGNFVVGKSLHGYCIQIG--LSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
V+ LL +F K+LH I + L + V +I +Y K G V K+FD
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +++ V +N +I Y++ G V +A + +MR G N ST GLLS
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS 123
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+ S+ L +L + + K LH + GL ++V+ +LI Y K G H ++F
Sbjct: 214 TESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMF 273
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
D+V WN +I A++ +AL L M G N T+V +L
Sbjct: 274 QDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVL 323
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGL-SSHLNVLTALIDMYVKTG 59
M G +TV+ +LP + G GK +H GL + V AL+D Y K+G
Sbjct: 225 MIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLL 118
+ IF + ++VV WN LI A NG + L M +G + N +TF+G+L
Sbjct: 285 DLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Query: 119 SAC 121
+ C
Sbjct: 345 ACC 347
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ A T LL + + GK +HG I+ G + ++++Y G +
Sbjct: 97 GIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDA 156
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+K+FD + +++VV+WN +I + +G V L+L ++M
Sbjct: 157 QKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQM 194
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 31 SLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNG 90
S+H I+ G + + +LI Y K G + ++FD + +DVV WN ++ Y+ +G
Sbjct: 390 SIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Query: 91 LVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V L + QKM I +S+TF+ LLSAC
Sbjct: 450 QVDSILPVFQKMDIN---PDSATFIALLSAC 477
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 7 IASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTA--LIDMYVKTGLVHWG 64
+ S L A + N + G +LH + + NV+ A LI+MY K G + +
Sbjct: 56 LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYA 115
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++FD++ +++VV W LI Y + G E L M + N T +L++C
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSC 171
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ A+ V +L + + +GK LH I+ S + V LI+MY K G
Sbjct: 348 MLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGD 407
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +F + ++ V WN +I +AR+G AL L ++M +K TF+ LL A
Sbjct: 408 LTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHA 467
Query: 121 C 121
C
Sbjct: 468 C 468
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNF-VVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
M SG A+ ++L + DT F +V K +H I G ++V LI Y K G
Sbjct: 147 MLGSGGFDHATLTIVL--SVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCG 204
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
GR +FD + ++V+ +I N L + L L MR + NS T++ L+
Sbjct: 205 CSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 120 ACPASESI 127
AC S+ I
Sbjct: 265 ACSGSQRI 272
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 5 GLIASAS-TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
GL+ S T L L A + V G+ +H + G+ S L + +AL+DMY K G +
Sbjct: 250 GLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIED 309
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
IF+S + D V ++ A+NG EA+ +M G++ +++ +L
Sbjct: 310 AWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL 364
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
TA++ + G V + RK+F+ + ++D + WN +I YA+ G EAL + M+++G+K
Sbjct: 178 TAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVK 237
Query: 109 TNSSTFVGLLSAC 121
N + +LSAC
Sbjct: 238 VNGVAMISVLSAC 250
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + ++ +L A G G+ H Y + + + + T L+D+Y K G
Sbjct: 231 MQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD 290
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++F + +K+V W+ + A NG + L L M+ G+ N+ TFV +L
Sbjct: 291 MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG 350
Query: 121 C 121
C
Sbjct: 351 C 351
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSL-HGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ S TV+ L A G+ G+++ HGY + ++ V A IDMY K G V
Sbjct: 205 GIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDK 259
Query: 64 GRKIFDSLV-DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F+ K VV WN +I +A +G AL + K+ G+K + +++ L+AC
Sbjct: 260 AYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTAC 318
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
LH + GLS+ + T L+D Y K G + K+FD + +DV WN LI
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
EA+ L ++M +G++ + T V L AC
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGAC 220
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK-DVVLWNCLIGNYA 87
G+ +H I++G S + LI+MY K G V K+F S D+ V WN ++ +Y
Sbjct: 316 GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYM 375
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSS 112
+NG+ EA+ LL +M+ G+K + +
Sbjct: 376 QNGIYIEAIKLLYQMKATGIKAHDT 400
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
+C L ++ ++L G G +G +H Y ++ G S +++ +LI MY K
Sbjct: 512 LCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCD 571
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNY--ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
KIF+++ + DV+ WN LI Y RNG EAL L +M + +K + T ++
Sbjct: 572 SDDAIKIFNTMREHDVISWNSLISCYILQRNG--DEALALWSRMNEKEIKPDIITLTLVI 629
Query: 119 SACPASES 126
SA +ES
Sbjct: 630 SAFRYTES 637
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR--KIFD 69
T + +L A F +G +HG ++ G + + V +L+ +Y K K+FD
Sbjct: 183 TFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFD 242
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSACPAS 124
+ +DV WN ++ + + G +A L +M R++G +S T LLS+C S
Sbjct: 243 EIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL ++ L A +G++ GK++H Y + L + T L+D Y K G +
Sbjct: 244 GLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTA 303
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+IF+ DK + WN +I A +G + +KM G+K + TF+ +L C S
Sbjct: 304 MEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHS 363
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 31/137 (22%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMY----------------------- 55
AA G+ + K+LH ++ GL S L L LI +Y
Sbjct: 126 AAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVT 185
Query: 56 --------VKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
VK + R++FDS+ +D+V WN LI YA+ EA+ L +M G+
Sbjct: 186 YNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGL 245
Query: 108 KTNSSTFVGLLSACPAS 124
K ++ V LSAC S
Sbjct: 246 KPDNVAIVSTLSACAQS 262
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T L+ ++ N LH +++G +S + L+ YVK ++ RK+FD +
Sbjct: 31 TKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEM 90
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSACPA 123
+ +VV W +I Y G AL + QKM + + N TF + AC A
Sbjct: 91 CEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSA 143
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLV--DKDVVLWNCLIGN 85
+GK++H GL ++ V ++L+DMY K V R++FDS++ ++VV W +I
Sbjct: 149 IGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA 208
Query: 86 YARNGLVGEALYLLQKMR--IQGMKTNSSTFVGLLSACPA 123
YA+N EA+ L + + + N ++SAC +
Sbjct: 209 YAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSS 248
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
++ A G GK HG + G S+ V T+L+DMY K G + KIF +
Sbjct: 242 VISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS 301
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
V+ + +I A++GL A+ L +M + N T +G+L AC S
Sbjct: 302 VISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S + A T++ + A G+ GK H Y + + N+ A+IDMY K G +
Sbjct: 432 SQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIET 491
Query: 64 GRKIF---DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
IF ++ + WN +I A +G AL L ++ +K NS TFVG+LSA
Sbjct: 492 ALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSA 551
Query: 121 C 121
C
Sbjct: 552 C 552
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 22 DTGNFVVGKSLHGYCI-----------QIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
D +F+ +H Y + + + H+ ALI +VK G+V R++FD
Sbjct: 337 DCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ 396
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSA 120
DKD+ WN +I YA++ AL+L ++M +K ++ T V + SA
Sbjct: 397 THDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSA 447
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 26 FVVGKSLHGYCIQIGLSS---------HLNVLT--ALIDMYVKTGLVHWGRKIFDSLVDK 74
FV LH YC+ + L N++T +++ Y K GL+ ++FD + +K
Sbjct: 209 FVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK 268
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
D+V W +I R + EAL +M GMK + V LLSA S
Sbjct: 269 DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARS 318
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 61/117 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++A+ + ++ ++ + G G+ + Y ++ ++ +L + TAL+DM+ + G +
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F+ L + D + W+ +I A +G +A++ +M G TF +LSAC
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC 360
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 44/73 (60%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
T+++ Y K G+V R++FD + +++ W+ +I YA+N +A+ L + M+ +G+
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 109 TNSSTFVGLLSAC 121
N + V ++S+C
Sbjct: 247 ANETVMVSVISSC 259
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 44/91 (48%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T L+ A+ + +VG+ H ++ G + + V +L+ MY G + +IF +
Sbjct: 119 TFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM 178
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+DVV W ++ Y + G+V A + +M
Sbjct: 179 GFRDVVSWTSMVAGYCKCGMVENAREMFDEM 209
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
+H I+ G ++ + V +LID Y K+G RK+FD L ++ +I YARNG+
Sbjct: 441 VHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGM 500
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+ + +L++M + + T + +LS C S
Sbjct: 501 GTDCVKMLREMDRMNLIPDEVTILSVLSGCSHS 533
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M GL SAST +L D G +H I +G ++ V +AL+ +Y L
Sbjct: 103 MVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRL 162
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V K+FD ++D+++ + N L+ + + G + +M ++G+ N T+ ++
Sbjct: 163 VDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRG 222
Query: 121 C 121
C
Sbjct: 223 C 223
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 29 GKSLHGYCIQIGLS-SHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
GK LH ++ G + S++ V L+D Y G + + F+++ +KDV+ WN ++ A
Sbjct: 232 GKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
G V ++L L KM+ G + + F+ L+ C + I
Sbjct: 292 DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDI 331
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+++ ++ A + F +G +HG I++G V +LI Y + RK+
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKV 282
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
FD V + V +W L+ Y+ N +AL + M + N STF L++C A
Sbjct: 283 FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSA 338
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + ++ + ST L + G GK +HG +++GL + V +L+ MY +G
Sbjct: 317 MLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGN 376
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V+ +F + K +V WN +I A++G A + +M + + TF GLLSA
Sbjct: 377 VNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSA 436
Query: 121 C 121
C
Sbjct: 437 C 437
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL--TALIDMYVKTGLVHW 63
+I + ST + A + + GKS+H I+ L NV +LI Y K G +
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKF-LGKRFNVFVWNSLISFYSKCGNMED 280
Query: 64 GRKIFDSLVD--KDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSA 120
F+ L + +++V WN +I YA NG EA+ + +KM + ++ N+ T +G+L A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 121 C 121
C
Sbjct: 341 C 341
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK LH Y +++GL+S++ V +A+++ YVK + R+ FD D +VV LI Y
Sbjct: 111 LGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYL 170
Query: 88 RNGLVGEALYLLQKM 102
+ EAL L + M
Sbjct: 171 KKHEFEEALSLFRAM 185
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 55/109 (50%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T +++ + G VG S+HG ++IG + V T+ +D Y K + RK+F +
Sbjct: 112 TFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEM 171
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+++ V W L+ Y ++G + EA + M + + + ++ GL+ +
Sbjct: 172 PERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKS 220
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
T++ID Y K G + R +F+ DV W+ LI YA+NG EA + +M + +K
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 109 TNSSTFVGLLSAC 121
+ VGL+SAC
Sbjct: 302 PDEFIMVGLMSAC 314
Score = 45.8 bits (107), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQI--GLSSHLNVLTALIDMYVKT 58
MC + ++ L+ A G F + + + Y Q SSH V+ ALIDM K
Sbjct: 295 MCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHY-VVPALIDMNAKC 353
Query: 59 GLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
G + K+F+ + +D+V + ++ A +G EA+ L +KM +G+ + F +L
Sbjct: 354 GHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL 413
Query: 119 SACPAS 124
C S
Sbjct: 414 KVCGQS 419
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 7 IASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS-SHLNVLT--ALIDMYVKTGLVHW 63
+ S +L L G+ K++HG +I S SHL++ + L++MY GL +
Sbjct: 251 VVDLSRLLRLAKICGEAEGLQEAKTVHG---KISASVSHLDLSSNHVLLEMYSNCGLANE 307
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F+ + +K++ W +I +A+NG +A+ + + + +G + F G+ AC
Sbjct: 308 AASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYAC 365
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ A+ +L+ TG F+ K L + + V LID ++++G
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 65 RKIFDSLVDK----DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
RK+F V+K DVV N +I + R+G++ EAL + +M + + + T+ ++
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 46 NVLT--ALIDMYVKTGLVHWGRKIFDSL----VDKDVVLWNCLIGNYARNGLVGEALYLL 99
N+LT LID Y K GL +IF + DVVL++ LI +NGLVG A+ L+
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI 572
Query: 100 QKMRIQGMKTNSSTFVGLLSA 120
+M +G+ N T+ ++ A
Sbjct: 573 DEMTKEGISPNVVTYNSIIDA 593