Miyakogusa Predicted Gene
- Lj0g3v0077169.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0077169.2 Non Chatacterized Hit- tr|B9RJV9|B9RJV9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,46.73,7e-18,seg,NULL; UCH_2_1,Peptidase C19, ubiquitin
carboxyl-terminal hydrolase 2, conserved site; UCH_2_3,Pe,CUFF.4027.2
(616 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 385 e-107
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 312 4e-85
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 269 5e-72
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 267 1e-71
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 259 4e-69
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 258 9e-69
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 253 2e-67
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 154 1e-37
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 145 1e-34
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 96 1e-19
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 93 5e-19
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 89 7e-18
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 86 6e-17
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 84 4e-16
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 81 2e-15
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 64 4e-10
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 60 5e-09
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 59 1e-08
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 54 2e-07
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 53 5e-07
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 53 5e-07
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 53 5e-07
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/276 (68%), Positives = 222/276 (80%), Gaps = 2/276 (0%)
Query: 335 KVSAVPNLPQNVRSGLKTSMQKVVQQFRSSKESRSNPVSVE-NKMGFPYELFMELYCYDK 393
K ++ P + Q SGLKTS+QKVVQ FR + S+ + S ++M F YELF++LYC D+
Sbjct: 265 KANSKPKVSQASSSGLKTSVQKVVQHFRPPQSSKKSQPSSSIDEMSFSYELFVKLYC-DR 323
Query: 394 VKLYPFGLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQKKGWCFICEFEYLILK 453
V+L PFGL NLGNSCYANAVLQCLA+TRPL SYL +G HS+ C+KK WCF+CEFE+LILK
Sbjct: 324 VELQPFGLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKKSWCFVCEFEHLILK 383
Query: 454 AKEGNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSICLKEAGVSSPLTEE 513
A+ G LSPI ILSK+ KIG +LG G+EEDAHEFLRCAVDTMQS+ LKEA + P EE
Sbjct: 384 ARGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAPAAGPFAEE 443
Query: 514 TTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDK 573
TTL+G TFGGYL SKIKC+ CL KSER E MMDLTVEIDG+IG+LEEAL QFTA E+LD
Sbjct: 444 TTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLDG 503
Query: 574 DNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ 609
+N+Y C RCKSY+KAKKKL ILE PNILT+VLKRFQ
Sbjct: 504 ENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQ 539
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Query: 59 AQFYQCAVCYSPTTMRCSRCKAVRYCSGKCQISHWRLGHKDECCPANTTMDHQEENISFS 118
+ Y+CAVC PTT RCS+CK+VRYCS KCQI HWR GHK+EC + D+ EE +
Sbjct: 52 SDVYRCAVCLYPTTTRCSQCKSVRYCSSKCQILHWRRGHKEEC----RSPDYDEEKEEY- 106
Query: 119 ASVSETQSGFHEMEGSNAGIASSNDSYSS 147
QS + E SN S +Y S
Sbjct: 107 -----VQSDYDAKE-SNVDFPSRGTAYES 129
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/266 (59%), Positives = 189/266 (71%), Gaps = 4/266 (1%)
Query: 347 RSGLKTSMQKVVQQFRSSKESRSNPVSVENKMGFPYELFMELYCYDKVKLYPFGLTNLGN 406
RSGLK S+ KVV Q+ K +K FPYE+F +LY Y K++ P GL N+GN
Sbjct: 491 RSGLKASVLKVVDQWTRPKSENEMAGRHGHKGLFPYEVFAKLYTY-KIEFQPCGLINVGN 549
Query: 407 SCYANAVLQCLAYTRPLTSYLFQGFHSRRCQKKGWCFICEFEYLILKAKEGNCALSPIGI 466
SC+AN V QCL +T PLT+Y Q FHSR C KK CF C FE L++KAKE LSP G+
Sbjct: 550 SCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKLVVKAKEEKSPLSPNGL 609
Query: 467 LSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSICLKEAG---VSSPLTEETTLIGYTFGG 523
LS++ IG LG+G+EEDAHEFLR VDTMQS+C+K + S E+TTLIG TFGG
Sbjct: 610 LSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKLEDTTLIGLTFGG 669
Query: 524 YLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCK 583
YLRSKIKC+KC KSE E+MMDLTVEIDG+I TL++AL +FT EILD +NKY C CK
Sbjct: 670 YLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGENKYRCGSCK 729
Query: 584 SYEKAKKKLTILEAPNILTIVLKRFQ 609
SYE+AKKKL I E PN+LTI LKRFQ
Sbjct: 730 SYERAKKKLKITEPPNVLTIALKRFQ 755
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 42/58 (72%)
Query: 59 AQFYQCAVCYSPTTMRCSRCKAVRYCSGKCQISHWRLGHKDECCPANTTMDHQEENIS 116
+ + C VCY T RCSRCKAVRYCSGKCQI HWR GHKDEC PA+ D ++E+ S
Sbjct: 69 SNVFHCPVCYCLATTRCSRCKAVRYCSGKCQIIHWRQGHKDECHPASIVYDSEDESDS 126
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 135/268 (50%), Positives = 173/268 (64%), Gaps = 9/268 (3%)
Query: 345 NVRSGLKTSMQKVVQQFRSSKESRSNPVSVENKMGFPYELFMELYCYDKVKLYPFGLTNL 404
N + KT + V QQ +S + V FPYE F+ Y +D+ + P GLTN
Sbjct: 126 NRSASKKTRIALVPQQSQSKATLKPTDVL------FPYESFVRYYNWDRPIMAPCGLTNC 179
Query: 405 GNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQKKGWCFICEFEYLILKAKEGNCALSPI 464
GNSC+AN VLQCL++TRPL +YL + H R C++ WCF+CEFE + +A SP+
Sbjct: 180 GNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRANYSRFPFSPM 239
Query: 465 GILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSICLKEAG---VSSPLTEETTLIGYTF 521
I+S++ IG NLG+GR+EDAHE +R A+D MQS+CL E G V P +ETTLI Y F
Sbjct: 240 NIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQYIF 299
Query: 522 GGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSR 581
GG L+S+++C C S++YE MMDLTVEI G+ +LEE L QFTA E L DN Y C R
Sbjct: 300 GGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDR 359
Query: 582 CKSYEKAKKKLTILEAPNILTIVLKRFQ 609
C Y KA K+L+I APNILTI LKRFQ
Sbjct: 360 CDDYVKACKRLSIRCAPNILTIALKRFQ 387
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 63 QCAVCYSPTTMRCSRCKAVRYCSGKCQISHWRLGHKDECCPANTTMDH--QEENISFSAS 120
+C+VC TT +CSRCK+VRYCS CQ S W+ GHK +C +T + ++I F AS
Sbjct: 63 ECSVCGKATTKKCSRCKSVRYCSAACQTSDWKSGHKLKCKGFRSTDSSPVRRDDIDFEAS 122
Query: 121 V 121
+
Sbjct: 123 L 123
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 162/233 (69%), Gaps = 3/233 (1%)
Query: 380 FPYELFMELYCYDKVKLYPFGLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQKK 439
FPYE F+E + +D +L P GL N GNSC+AN +LQCL++TRPL +YL + H R C +
Sbjct: 149 FPYEEFVEYFNWDNPELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMRN 208
Query: 440 GWCFICEFEYLILKAKEGNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSI 499
WCF+CEF+ + +A + SP+ I+S++ IG LG+GR+EDAHEF+R A+D MQS+
Sbjct: 209 DWCFLCEFQTHVERASQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSV 268
Query: 500 CLKEAG---VSSPLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIG 556
CL E G + P ++ETTLI Y FGG L+S+++C C S++YE MMDL VE+ G+ G
Sbjct: 269 CLDEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAG 328
Query: 557 TLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ 609
+LEE L QFTA E L DN Y C RC Y KA K+LTI APNILTI LKR+Q
Sbjct: 329 SLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQ 381
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 64 CAVCYSPTTMRCSRCKAVRYCSGKCQISHWRLGHKDEC 101
C+VC + +T +CSRCK+VRYCS +CQ S W GH+ C
Sbjct: 61 CSVCGNFSTKKCSRCKSVRYCSAECQRSDWSSGHQRNC 98
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 161/236 (68%), Gaps = 3/236 (1%)
Query: 377 KMGFPYELFMELYCYDKVKLYPFGLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRC 436
KM FPYE F++ + + L P GL N GNSCYANAVLQ L T+PL +YL + HSR C
Sbjct: 416 KMLFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSC 475
Query: 437 QKKGWCFICEFEYLILKAKEGNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTM 496
K WC +CE E ++ +E LS ILS + I +G G +EDAHEFLR V +M
Sbjct: 476 SGKDWCLMCELEQHVMMLRESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASM 535
Query: 497 QSICLKEAGVSS---PLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDG 553
QSICL+ G + P +ETTL+ + FGG LRSK+KCL+C +SERYE +MDLT+EI G
Sbjct: 536 QSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYG 595
Query: 554 EIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ 609
+ +L++AL QFT PE LD +N Y CSRC Y +A+K+L+I EAPNILTIVLKRFQ
Sbjct: 596 WVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQ 651
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 60 QFYQCAVCYSPTTMRCSRCKAVRYCSGKCQISHWRLGHKDECCP 103
+ + CA C+ P RCSRCK+VRYCSGKCQI HWR+ HKDEC P
Sbjct: 126 ELHVCARCFGPAKTRCSRCKSVRYCSGKCQIIHWRVAHKDECVP 169
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/247 (51%), Positives = 165/247 (66%), Gaps = 3/247 (1%)
Query: 366 ESRSNPVSVENKMGFPYELFMELYCYDKVKLYPFGLTNLGNSCYANAVLQCLAYTRPLTS 425
+ R + V + M FPYE F++ + + L P GL N GNSCYANAVLQ L T+PL +
Sbjct: 409 DDRYKNLKVSSLMLFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVA 468
Query: 426 YLFQGFHSRRCQKKGWCFICEFEYLILKAKEGNCALSPIGILSKIHKIGSNLGHGREEDA 485
YL + HSR C K WC +CE E ++ +E LS ILS + I +G G +EDA
Sbjct: 469 YLLRRSHSRSCSGKDWCLMCELEQHVMMLRESGGPLSASRILSHMRSINCQIGDGSQEDA 528
Query: 486 HEFLRCAVDTMQSICLKEAGVSS---PLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYE 542
HEFLR V +MQSICL+ G + P +ETTL+ + FGG LRSK+KCL+C +SERYE
Sbjct: 529 HEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYE 588
Query: 543 RMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILT 602
+MDLT+EI G + +L++AL QFT PE LD +N Y CSRC Y +A+K+L+I EAPNILT
Sbjct: 589 NIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILT 648
Query: 603 IVLKRFQ 609
IVLKRFQ
Sbjct: 649 IVLKRFQ 655
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 60 QFYQCAVCYSPTTMRCSRCKAVRYCSGKCQISHWRLGHKDECCP 103
+ + CA C+ P RCSRCK+VRYCSGKCQI HWR+ HKDEC P
Sbjct: 126 ELHVCARCFGPAKTRCSRCKSVRYCSGKCQIIHWRVAHKDECVP 169
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 151/217 (69%), Gaps = 3/217 (1%)
Query: 396 LYPFGLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQKKGWCFICEFEYLILKAK 455
+ P GLTN GNSC+AN VLQCL++TRPL +YL + H R C++ WCF+CEFE + +A
Sbjct: 1 MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRAN 60
Query: 456 EGNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSICLKEAG---VSSPLTE 512
SP+ I+S++ IG NLG+GR+EDAHE +R A+D MQS+CL E G V P +
Sbjct: 61 YSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQ 120
Query: 513 ETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILD 572
ETTLI Y FGG L+S+++C C S++YE MMDLTVEI G+ +LEE L QFTA E L
Sbjct: 121 ETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQ 180
Query: 573 KDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ 609
DN Y C RC Y KA K+L+I APNILTI LKRFQ
Sbjct: 181 GDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ 217
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 400 GLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQKKGWCFICEFEYLILKAKEGNC 459
GL NLGN+C+ N+VLQCL YT PL + L H + C G+C +C + + A++ N
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVRTARQANG 167
Query: 460 -ALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSICLKEAGVSSPLTE--ETTL 516
L+P ++S + I N + R+EDAHE++ ++ M C +GV S ++ +L
Sbjct: 168 RILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHK-CSLPSGVPSESSDAYRRSL 226
Query: 517 IGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNK 576
+ FGG LRS++KC +C S +++ +DL+++I + +L+ AL +FTA E+LD K
Sbjct: 227 VHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI-SKADSLQRALSRFTAVELLDNGAK 285
Query: 577 -YNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ 609
Y C RCK KAKK+LT+ +AP +LT+ LKRF+
Sbjct: 286 VYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFE 319
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 133/243 (54%), Gaps = 13/243 (5%)
Query: 378 MGFPYEL--FMELYCYDKVKLYPFGLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRR 435
MGF ++ L + P GL NLGN+CY N+VLQCL +T PL ++ HS
Sbjct: 1 MGFKLQMSWMPSLLSQKRRNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSH 60
Query: 436 C------QKKGWCFICEFEYLILKAKEGNCAL-SPIGILSKIHKIGSNLGHGREEDAHEF 488
C ++K C C E I ++ + +P I S + + GR+EDAHEF
Sbjct: 61 CDTYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEF 120
Query: 489 LRCAVDTMQSICLKEAGVSSPLTEE---TTLIGYTFGGYLRSKIKCLKCLGKSERYERMM 545
LR +D + L+ + E +++ FGG L+S++KCL C +S + + +M
Sbjct: 121 LRYVIDACHNTSLRLKKLRYNGNEPFNGNSVVKEIFGGALQSQVKCLSCGAESNKADEIM 180
Query: 546 DLTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVL 605
D+++EI + +++E+L +F EILD +NKY C C+ A+K+++IL+APNIL I L
Sbjct: 181 DISLEIL-QSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQL 239
Query: 606 KRF 608
KRF
Sbjct: 240 KRF 242
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 400 GLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQ--KKGWCFICEFEYLILKA-KE 456
GL NLGNSC+ N+V QC +T PL L + C + +C I Y I A +
Sbjct: 177 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIEAALRP 236
Query: 457 GNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSICLKEAGVSSPLTEETTL 516
C ++P ++ + ++EDAHEFL+ ++ ++ +T +
Sbjct: 237 ERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLEICGSDRTSFRGDITSQD-- 294
Query: 517 IGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNK 576
F G L S ++C C SE YE+ + L++EI+ ++ TL AL FT E LD+ +
Sbjct: 295 ---VFSGRLISGLRCCNCDYVSETYEKSVGLSLEIE-DVDTLGSALESFTRVEKLDE--Q 348
Query: 577 YNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQ 609
C C +K+L + + P + T LKRF+
Sbjct: 349 LTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFK 381
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 27/239 (11%)
Query: 399 FGLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQKKGWCFICEFEYL--ILKAKE 456
FG N GN+CY N+VLQ L + P L + + + + + C + I K+
Sbjct: 23 FGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQKK 82
Query: 457 GNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSICLKEAGVS--------- 507
++P + ++ K +DAHEFL ++ + I KE +
Sbjct: 83 KTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSSS 142
Query: 508 ---------SPLTEET------TLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEID 552
+PL T + F G L ++ +CL+C + R E +DL+++I+
Sbjct: 143 PEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIE 202
Query: 553 GEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKRFQWL 611
+ ++ L F++ E L ++K+ C +C S ++A+K++ I + P+IL I LKRF+++
Sbjct: 203 -QNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYM 260
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 32/244 (13%)
Query: 399 FGLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRR----CQKKGWCFICEFEYLILKA 454
FG N GN+CY N+VLQ L + P L + + S + ++ + + I
Sbjct: 23 FGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISSQ 82
Query: 455 KEGNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSICLKEA---------- 504
K+ ++P + ++ K +DAHEFL ++ + I KEA
Sbjct: 83 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHETS 142
Query: 505 ----------GVSSPLTEET-------TLIGYTFGGYLRSKIKCLKCLGKSERYERMMDL 547
G+ P T + F G L ++ +CL+C + R E +DL
Sbjct: 143 SSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLDL 202
Query: 548 TVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKR 607
+++I+ + ++ L F++ E L ++K+ C +C S ++A+K++ I + P+IL I LKR
Sbjct: 203 SLDIE-QNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 261
Query: 608 FQWL 611
F+++
Sbjct: 262 FKYI 265
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 400 GLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQ--KKGWCFICEF-EYLILKAKE 456
GL N GN+C+ +VLQC +T PL L + C + +C + +++ L +
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRS 223
Query: 457 GNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSICLKEAG-VSSPLTEETT 515
++ + S+ +EDAHEFL+ +D ++ CL + S +++
Sbjct: 224 SGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKLERCCLDPKNQLGSVSSQDLN 283
Query: 516 LIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDN 575
++ FGG L S + C C S +E + ++EI+ ++ TL +AL FT E L ++
Sbjct: 284 IVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIE-DVNTLWKALESFTCVEKL--ED 340
Query: 576 KYNCSRCKSYEKAKKKLTILEAPNILTIVLKRF 608
+ C CK +K+L + P + T LKRF
Sbjct: 341 QLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRF 373
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 41/253 (16%)
Query: 399 FGLTNLGNSCYANAVLQ--------------CLAYTRPLTSYLFQGFHSRRCQKKGWCFI 444
FG N GN+CY N+VLQ L + P L + + + + +
Sbjct: 23 FGFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAPFREQLLEHYANNKADAEENLLT 82
Query: 445 CEFEYL--ILKAKEGNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQSICLK 502
C + I K+ ++P + ++ K +DAHEFL ++ + I K
Sbjct: 83 CLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEK 142
Query: 503 EAGVS------------------SPLTEET------TLIGYTFGGYLRSKIKCLKCLGKS 538
E + +PL T + F G L ++ +CL+C +
Sbjct: 143 ETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVT 202
Query: 539 ERYERMMDLTVEIDGEIGTLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAP 598
R E +DL+++I+ + ++ L F++ E L ++K+ C +C S ++A+K++ I + P
Sbjct: 203 ARDETFLDLSLDIE-QNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPP 261
Query: 599 NILTIVLKRFQWL 611
+IL I LKRF+++
Sbjct: 262 HILVIHLKRFKYM 274
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 39/243 (16%)
Query: 400 GLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRR-CQKKGW---CFICEFEYLILKAK 455
GL NLG++C+ NAVLQ L + PL ++ G H+R C ++ C C+ + +
Sbjct: 178 GLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDVIFSAMF 237
Query: 456 EGN-CALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTM-----QSICLKEAGVSSP 509
G+ SP +L + +NL ++D+HEF +D + +S CL +
Sbjct: 238 SGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKSKCLYQD----- 292
Query: 510 LTEETTLIGY-TFGGYLRSKIKCLKCLGKSERYERMMDLTVEIDGEIG------------ 556
EE I + F G LRS + C C S Y+ +D+++ +D G
Sbjct: 293 -NEECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFSPADCRKNRYS 351
Query: 557 ----------TLEEALGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLK 606
TL L FT E L D K NC C ++ K+++I P +L + +K
Sbjct: 352 GGPSVNAIMPTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVK 411
Query: 607 RFQ 609
RF+
Sbjct: 412 RFE 414
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 43/226 (19%)
Query: 398 PFGLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQKKGWCFICEFEYLILKAKEG 457
P GLTNLG +CYAN++LQCL Y+ F ++G + E +LK
Sbjct: 105 PAGLTNLGATCYANSILQCL--------YMNTAF------REG---VFSVEVHVLKQ--- 144
Query: 458 NCALSPIG-ILSKIHK-----IGSN-------LGHGREEDAHEFLRCAVDTMQSICLKEA 504
N L I + +++H + S+ L +G ++D HEFL + ++ L +
Sbjct: 145 NPVLDQIARLFAQLHASQKSFVDSDAFVKTLELDNGVQQDTHEFLTLLLSLLERC-LLHS 203
Query: 505 GVSSPLTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMD---LTVEIDGEIGTLEEA 561
GV + T++ F G + C KC SE +M D L + + G + +L+ +
Sbjct: 204 GVKA-----KTIVQDLFSGSVSHVTTCSKCGRDSEASSKMEDFYALELNVKG-LKSLDAS 257
Query: 562 LGQFTAPEILDKDNKYNCSRCKSYEKAKKKLTILEAPNILTIVLKR 607
L + + E L+ DN+Y C C + A + + + P ++T LKR
Sbjct: 258 LNDYLSLEQLNGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKR 303
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 400 GLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQKKGWCFICEFEYLILKAKEG-- 457
GL NLGN+C+ N+++Q L L + F G L + K
Sbjct: 232 GLVNLGNTCFFNSIMQNLLSLDRLRDH----FLKENGSGVGGPLASSLRKLFTETKPEAG 287
Query: 458 -NCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTM---QSICLKEAGVSSPLTEE 513
++P + D+HE LRC +D++ +S K+ GVS +
Sbjct: 288 LKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKKRGVSDNDEKS 347
Query: 514 TTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTV 549
TTLI FGG S + C++C S+ YE +DL++
Sbjct: 348 TTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSL 383
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1
| chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 14/162 (8%)
Query: 400 GLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQKKGWCFICEFEYLILKAKEGNC 459
GL NLGN+C+ N+V+Q L L + F G E E +
Sbjct: 203 GLVNLGNTCFFNSVMQNLLSLDQLREH----FLKEDLSVSGPLVSSLKELFAESNSEASV 258
Query: 460 ---ALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTM---QSICLKEAGVS----SP 509
++P + + ++ D+HE LRC +D + +S K+ GVS S
Sbjct: 259 FRNEINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGLSIEESSLRKKLGVSDSNDSS 318
Query: 510 LTEETTLIGYTFGGYLRSKIKCLKCLGKSERYERMMDLTVEI 551
++ TLI FGG + S + CL+C S+ YE MDL++ +
Sbjct: 319 TYQKPTLIDSVFGGEISSTVSCLECGHFSKVYEPFMDLSLPV 360
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 400 GLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHS--RRCQKKGWC--FICEFEYLILKA- 454
GL+NLGN+C+ N+ LQCLA+T P+ Y Q + R G C F L+ K
Sbjct: 305 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 364
Query: 455 KEGNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQ 497
G A++P +K+ + + D+ E L +D +
Sbjct: 365 SSGRNAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLH 407
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 400 GLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHSRRCQK-----KGWCFICEFEYLILKA 454
GL NLGN+C+ N+ LQCLA+T P+ Y Q + S K +G I E L
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLRKLW 361
Query: 455 KEGNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQ 497
G ++P +K+ + + D+ E L +D +
Sbjct: 362 SSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLH 404
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 400 GLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHS--RRCQKKGWC--FICEFEYLILKA- 454
GL+NLGN+C+ N+ LQCLA+T P+ Y Q + R G C F L+ K
Sbjct: 304 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 363
Query: 455 KEGNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQ 497
G +++P +K+ + + D+ E L +D +
Sbjct: 364 SSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLH 406
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 400 GLTNLGNSCYANAVLQCLAYTRPLTSYLFQGFHS--RRCQKKGWC--FICEFEYLILKA- 454
GL+NLGN+C+ N+ LQCLA+T P+ Y Q + R G C F L+ K
Sbjct: 304 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 363
Query: 455 KEGNCALSPIGILSKIHKIGSNLGHGREEDAHEFLRCAVDTMQ 497
G +++P +K+ + + D+ E L +D +
Sbjct: 364 SSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLH 406