Miyakogusa Predicted Gene
- Lj0g3v0076279.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0076279.1 Non Chatacterized Hit- tr|I1MQ09|I1MQ09_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,30.94,4e-19,PPR_1,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat; PPR:
p,CUFF.3849.1
(210 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 177 6e-45
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 7e-43
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 9e-43
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 2e-42
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 8e-42
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 6e-41
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 6e-41
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 3e-40
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 6e-40
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 3e-39
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 3e-39
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 156 8e-39
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 5e-38
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 6e-38
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 1e-37
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 2e-37
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 9e-37
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 1e-36
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 1e-36
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 5e-36
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 3e-35
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 4e-35
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 9e-35
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 142 2e-34
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 4e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 7e-33
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 2e-32
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-31
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 130 9e-31
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 3e-30
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 3e-30
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 2e-29
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 2e-29
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-28
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 7e-28
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 8e-28
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 3e-27
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 4e-27
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 5e-27
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 6e-27
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 7e-27
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 1e-26
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 1e-26
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 1e-26
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 115 2e-26
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 8e-26
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 112 2e-25
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 4e-25
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 5e-25
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 8e-25
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 1e-24
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 108 2e-24
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 108 3e-24
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 6e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 107 7e-24
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 7e-24
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 8e-24
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 9e-24
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 9e-24
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 105 2e-23
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 5e-23
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 5e-23
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 1e-22
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-22
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 2e-22
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 4e-22
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-22
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-22
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 8e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 9e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 2e-21
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-21
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 3e-21
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 4e-21
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 7e-21
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 8e-21
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-20
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 3e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 95 4e-20
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 4e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 95 4e-20
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 6e-20
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 6e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 94 6e-20
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-19
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 4e-19
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 90 1e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 90 1e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 3e-18
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 3e-18
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 4e-18
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 3e-17
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 3e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-17
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-17
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 9e-17
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 83 1e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 81 4e-16
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 5e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 6e-16
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 8e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 8e-16
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 1e-15
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 3e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-15
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 4e-15
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 5e-15
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 8e-15
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 77 1e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 77 1e-14
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-14
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 74 5e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-14
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 7e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 8e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 8e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 8e-14
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 8e-14
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 8e-14
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 8e-14
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 4e-13
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 4e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 5e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 5e-13
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 69 3e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 4e-12
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 68 5e-12
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 5e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-12
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 1e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 67 1e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 65 4e-11
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-11
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 8e-11
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 63 1e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 63 2e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 2e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 5e-10
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 60 1e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-09
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 3e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 4e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 4e-09
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-09
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 9e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 9e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 57 1e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 56 2e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 55 4e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-08
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 8e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 8e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 54 9e-08
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 1e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 53 1e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 52 2e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 3e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 4e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 50 9e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 1e-06
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 3e-06
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 49 4e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 5e-06
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 5e-06
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 5e-06
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 48 6e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 6e-06
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 6e-06
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 6e-06
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 47 8e-06
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 8e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 47 8e-06
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 47 9e-06
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 177 bits (448), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 136/210 (64%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P +++F++ +++ +TK ++ + +Q+E+ GI ++ TL+I+INC C +
Sbjct: 79 MIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCK 138
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A+SVL ++K G++P T TF TLIKGL L G V A+ D ++ G + + V+Y +
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++NG+C+ G+TS AL+ LR++E + + +V Y+TIIDSLC+D + A +L+ EM KG
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I +VVTYN+L+ G C G+ LL +
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 114/209 (54%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
++++ P FN ++ L S A+ L +M G P +VT + ++N C G
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T+ A +L + +R + T++T+I LC G + A+ + +G + + V+Y +
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ GLCK G+ + L+ + + I+PNV+ +N ++D K+ + A LY EMI +G
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
ISPN++TYN L+ G+C+ +L +A +LD
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 104/204 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ I+P II +N ++ S A ++ M +P +VT + LI +C + +
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
V NI KRG +T++ L++G C G + A + +++ G + ++YG
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++GLC G+ ALE ++ + +VMY TII+ +CK V A NL+ + KG
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ PNV+TY +I G C G L +A
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEA 527
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 104/205 (50%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I ++ +N ++ L K ++ L + M I P+++T ++L++ G+ A
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ ++ RG P IT+ TL+ G C++ + A D+++ + V++ +LI G
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C + ++ R I + ++ N V Y+ ++ C+ + A L+ EM+ G+ P+V
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
+TY L+ G C G+L++A+ + ++
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFED 463
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + +P I+ F ++ K + + R + G+ + VT SIL+ C G+
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ G P +T+ L+ GLC G + +AL+ + + L V Y T
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G+CK G+ A + + + PNV+ Y +I LCK +S A L +M G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+PN TYN LI G L + L++E
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + + ++ ++ SL + AISL ++ME GI S+VT + L+ C G+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+L +++ R P ITF L+ G + A + + ++ +G N ++Y T
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++G C S A L + P++V + ++I C V ++ + +G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ N VTY+ L+ GFC G++K A L E
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A L ++M G+ P ++T IL++ C G+ A + ++ K + +TT+I+
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
G+C G V A + +G + N ++Y +I+GLCK G S A LR++E P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
N YNT+I + +D ++ + L EM G S + + +I
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%)
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A ++ +++ P+ + F+ + + L F + G N +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+IN C+ +T A L ++ P+ +NT+I L + VS A L M+
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLL 208
G P+VVTYN+++ G C G A+ LL
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 73/160 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P ++ + +L L A+ + ++ + + +V + +I C G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+++ ++ +G +P +T+T +I GLC +G++ A + G N +Y T
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
LI + G+ +A+ + + +++ + +ID L
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 170 bits (430), Expect = 7e-43, Method: Composition-based stats.
Identities = 92/243 (37%), Positives = 137/243 (56%), Gaps = 35/243 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q R P +I+FN++ +++ KTK Y ++L +QME GI S+ TLSI+INC C +
Sbjct: 79 MIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRK 138
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHD---------------- 104
+ AFS + I+K G++P T+ F TL+ GLCL V AL+ D
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 105 --------------VVL-----AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
VVL GF+ N+V+YG ++N +CK G+T+ A+E LR++E +
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I + V Y+ IID LCKD + +A NL++EM +KG +++TYN LI GFC G+
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 206 GLL 208
LL
Sbjct: 319 KLL 321
Score = 128 bits (322), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/209 (33%), Positives = 114/209 (54%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M P +I N ++ L S A+ L +M TG P+ VT ++N C GQ
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A +L + +R + + ++ +I GLC G++ A + + +GF+ + ++Y T
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G C G + LR + + I PNVV ++ +IDS K+ + A L EM+ +G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
I+PN +TYN+LI GFC +L++AI ++D
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Score = 120 bits (300), Expect = 8e-28, Method: Composition-based stats.
Identities = 59/196 (30%), Positives = 106/196 (54%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
II +N ++ + L R M I+P++VT S+LI+ G+ A +L
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+++RG P TIT+ +LI G C + A+Q D+++++G + +++ LING CK
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
LE R++ + +I N V YNT++ C+ + A L+ EM+ + + P++V+Y
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 190 ALIYGFCIVGQLKQAI 205
L+ G C G+L++A+
Sbjct: 478 ILLDGLCDNGELEKAL 493
Score = 112 bits (279), Expect = 2e-25, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 105/210 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I ++++ ++ L K A +L +MEI G ++T + LI C G+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+L +++KR P +TF+ LI G + A Q ++ +G N ++Y +
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G CK A++ + + + P+++ +N +I+ CK N + L+ EM ++G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ N VTYN L+ GFC G+L+ A L E
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Score = 100 bits (250), Expect = 6e-22, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 98/204 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q I P I +N ++ K AI + M G P ++T +ILIN +C +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + RG T+T+ TL++G C G + A + ++++ R + VSY
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++GLC GE ALE +IE + ++ +Y II +C + V A +L+ + +KG
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ + YN +I C L +A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKA 562
Score = 95.1 bits (235), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 103/208 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I+P ++ F+ ++ S VK A L ++M GI P+ +T + LI+ C +
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ ++ +G P +TF LI G C + L+ + +G N V+Y T
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ G C+ G+ A + +++ + + P++V Y ++D LC + + A ++ ++
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ ++ Y +I+G C ++ A L
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLF 531
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 35/227 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P I+ FN ++ K + L R+M + G+ + VT + L+ C G+
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF------------------ 102
A + ++ R +P +++ L+ GLC G + +AL+
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 103 --HDVVLA---------------QGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
H + A +G +L+ +Y +I+ LC+ S A R++ +
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
P+ + YN +I + D+ + A L EM G +V T +I
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 169 bits (429), Expect = 9e-43, Method: Composition-based stats.
Identities = 91/243 (37%), Positives = 137/243 (56%), Gaps = 35/243 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ R P +I+F+++ +++ KTK Y ++L +QME+ GI +L TLSI+INC C +
Sbjct: 79 MIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFR-------- 112
AFS + I+K G++P TITF+TLI GLCL G V AL+ D ++ G +
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 113 ---------------------------LNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
N V+YG ++N +CK G+T+ A+E LR++E +
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I + V Y+ IID LCK + +A NL++EM +KGI+ N++TYN LI GFC G+
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 206 GLL 208
LL
Sbjct: 319 KLL 321
Score = 116 bits (291), Expect = 1e-26, Method: Composition-based stats.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 1/210 (0%)
Query: 2 LQMR-ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
++M+ IT II +N ++ + L R M I P++VT S+LI+ G+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ RG P TIT+T+LI G C ++ +A Q D+++++G N ++
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING CK LE R++ + ++ + V YNT+I C+ ++ A L+ EM+ +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ PN+VTY L+ G C G+ ++A+ + ++
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Score = 114 bits (286), Expect = 4e-26, Method: Composition-based stats.
Identities = 64/209 (30%), Positives = 108/209 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M P +I N ++ L + + A+ L +M G P+ VT ++N C GQ
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A +L + +R + + ++ +I GLC G++ A + + +G N ++Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G C G + LR + + I PNVV ++ +IDS K+ + A L+ EMI +G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
I+P+ +TY +LI GFC L +A ++D
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVD 392
Score = 113 bits (283), Expect = 7e-26, Method: Composition-based stats.
Identities = 60/210 (28%), Positives = 108/210 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I ++++ ++ L K A +L +ME+ GIT +++T +ILI C G+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+L +++KR P +TF+ LI G + A + H ++ +G + ++Y +
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G CK A + + + + PN+ +N +I+ CK N + L+ +M ++G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + VTYN LI GFC +G+L A L E
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Score = 112 bits (279), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/204 (30%), Positives = 102/204 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ I P I + ++ K H A + M G P++ T +ILIN +C +
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + RG T+T+ TLI+G C G ++ A + ++++ N V+Y
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++GLC GE+ ALE +IE + ++ +YN II +C + V A +L+ + +KG
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ P V TYN +I G C G L +A
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEA 562
Score = 90.5 bits (223), Expect = 8e-19, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 95/210 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P I FN ++ K + L R+M + G+ VT + LI C LG+
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ R P +T+ L+ GLC G +AL+ + + L+ Y
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G+C + A + + + + P V YN +I LCK +S A L+ +M G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+P+ TYN LI G +++ L++E
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 136/245 (55%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + R P +I+F+++ + + +TK Y + L +QME+ GI +L TLSI+INC C +
Sbjct: 63 MTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRK 122
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF--------H--------- 103
+ AFS + I+K G++P T+TF+TLI GLCL G V AL+ H
Sbjct: 123 LSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNA 182
Query: 104 ------------------DVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
D ++ GF+ N+V+YG ++ +CK G+T+ A+E LR++E +
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I + V Y+ IID LCKD + +A NL++EM +KG +++ Y LI GFC G+
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 206 GLLDE 210
LL +
Sbjct: 303 KLLRD 307
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 109/209 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M P +I N ++ L S A+ L +M TG P+ VT ++ C GQ
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A +L + +R + + ++ +I GLC G++ A + + +GF+ + + Y T
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G C G + LR + + I P+VV ++ +ID K+ + A L+ EMI +G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
ISP+ VTY +LI GFC QL +A +LD
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 106/210 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +I ++++ ++ L K A +L +MEI G ++ + LI CY G+
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+L +++KR P + F+ LI G + A + H ++ +G + V+Y +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G CK + A L + + PN+ +N +I+ CK NL+ L+ +M ++G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + VTYN LI GFC +G+L+ A L E
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q I+P + + ++ K A + M G P++ T +ILIN +C
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + RG T+T+ TLI+G C G + A + ++++ R + VSY
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++GLC GE ALE +IE + ++ +YN II +C + V A +L+ + +KG
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ P+V TYN +I G C G L +A
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
II + ++ + L R M ITP +V S LI+C G+ A +
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+++RG P T+T+T+LI G C + +A D+++++G N ++ LING CK
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
LE R++ + ++ + V YNT+I C+ + A L+ EM+ + + P++V+Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
L+ G C G+ ++A+ + ++
Sbjct: 462 ILLDGLCDNGEPEKALEIFEK 482
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I FN ++ K + L R+M + G+ VT + LI C LG+ A +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++ R +P +++ L+ GLC G +AL+ + + L+ Y +I+G+C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ A + + + + P+V YN +I LCK +S A L+ +M G SPN T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YN LI G ++ L++E
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEE 587
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 166 bits (421), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 129/210 (61%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P I++FN++L+++VK K Y ISL ++ME+ GI L T +I+INC C Q
Sbjct: 76 MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQ 135
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A S+L +LK G++P +T +L+ G C R V A+ D ++ G++ + V+Y
Sbjct: 136 VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+ LCK + A +F ++IE + I PNVV Y +++ LC + S A L S+MI K
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I+PNV+TY+AL+ F G++ +A L +E
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 123/245 (50%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+++ P I+ +N ++ SL KTK + A +++E GI P++VT + L+N C +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 61 TTSAFSVLANILKR-----------------------------------GFQPTTITFTT 85
+ A +L++++K+ P +T+++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GLCL + A Q D+++++G + VSY TLING CK ++ R++ +
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
++ N V YNT+I + V A +S+M GISP++ TYN L+ G C G+L++A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 206 GLLDE 210
+ ++
Sbjct: 421 VIFED 425
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +ITP +I ++ +L + VK A L +M I P +VT S LIN C +
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ +G +++ TLI G C V ++ + +G N V+Y T
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G + G+ A EF Q++ I P++ YN ++ LC + + A ++ +M +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ ++VTY +I G C G++++A L
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M I P I+ ++ ++ L A + M G +V+ + LIN C +
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + +RG T+T+ TLI+G G+V +A +F + G + +Y
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ GLC GE AL ++ + + ++V Y T+I +CK V A +L+ + +KG
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGL 207
+ P++VTY ++ G C G L + L
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%)
Query: 9 PIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVL 68
++ +N ++ K K + L R+M G+ + VT + LI G A
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 69 ANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
+ + G P T+ L+ GLC G + +AL + + + L+ V+Y T+I G+CK
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ A + + + P++V Y T++ LC L+ LY++M +G+ N T
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I+P I +N +L L A+ + M+ + +VT + +I C G+ A+
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQ 115
S+ ++ +G +P +T+TT++ GLC +G +H + + +G N
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 164 bits (414), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 130/243 (53%), Gaps = 35/243 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P I+EFNK+L+++ K + ISL QM+ GI+ L T SI INC C Q
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 61 TTSAFSVLANILK-----------------------------------RGFQPTTITFTT 85
+ A +VLA ++K G++P T TFTT
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GL L A+ D ++ +G + + V+YGT++NGLCK G+ AL L ++E
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I NVV++NTIIDSLCK V A +L++EM KGI PNVVTYN+LI C G+ A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 206 GLL 208
LL
Sbjct: 314 RLL 316
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M RI ++ FN ++ SL K +H A+ L +ME GI P++VT + LINC C G+
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L+N+L++ P +TF LI G + A + H+ ++ + + ++Y
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING C A + + + + +PN+ YNT+I+ CK V L+ EM +G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ N VTY +I GF G A
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSA 452
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 35/239 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+++ P I+ + +L +K S A++L QM G P T + LI+ +
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRAL-------------------- 100
+ A +++ +++RG QP +T+ T++ GLC RG++ AL
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 101 ------QFHDVVLA---------QGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
++ V +A +G R N V+Y +LIN LC G S A L + +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
I PNVV +N +ID+ K+ + A L+ EMI + I P+ +TYN LI GFC+ +L +A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 3/208 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q I P I +N ++ A + + M P++ T + LIN C +
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + +RG T+T+TT+I+G G+ A +++ + ++Y
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++GLC G+ AL + ++ + N+ +YNT+I+ +CK V A +L+ + +K
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK- 532
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
P+VVTYN +I G C L++A L
Sbjct: 533 --PDVVTYNTMISGLCSKRLLQEADDLF 558
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 3/192 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P I +N ++ K K + L R+M G+ + VT + +I G
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
SA V ++ +T++ L+ GLC G + AL + LN Y T
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G+CK G+ A + + I P+VV YNT+I LC L+ A +L+ +M G
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 181 ISPNVVTYNALI 192
PN TYN LI
Sbjct: 566 TLPNSGTYNTLI 577
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + + + ++ + +A + +QM + ++T SIL++ C G+
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + + K + + T+I+G+C G V A D+ + + + V+Y T
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW---DLFCSLSIKPDVVTYNT 540
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+GLC A + R+++ +PN YNT+I + +D + + L EM G
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 181 ISPNVVT 187
+ T
Sbjct: 601 FVGDAST 607
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 164 bits (414), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 134/245 (54%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q R P I+FN++ +++ +TK Y + + ME+ GI + T++I+INC+C +
Sbjct: 61 MIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKK 120
Query: 61 TTSAFSVLANILKRGFQPTTITF-----------------------------------TT 85
AFSVL K G++P TITF +T
Sbjct: 121 LLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST 180
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GLCL+G V AL D ++ GF+ ++V+YG ++N LCK G ++ AL+ R++E +
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I +VV Y+ +IDSLCKD A +L++EM +KGI +VVTY++LI G C G+
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 206 GLLDE 210
+L E
Sbjct: 301 KMLRE 305
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 111/210 (52%), Gaps = 1/210 (0%)
Query: 2 LQMR-ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
++M+ I ++ ++ ++ L + + R+M I P +VT S LI+ G+
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ RG P TIT+ +LI G C +H A Q D+++++G + V+Y
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LIN CK + R+I + +IPN + YNT++ C+ ++ A L+ EM+ +G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+VVTY L+ G C G+L +A+ + ++
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ I P I +N ++ K A + M G P +VT SILIN +C +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ I +G P TIT+ TL+ G C G ++ A + ++++G + V+YG
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++GLC GE + ALE +++ + + +YN II +C + V A +L+ + KG
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ P+VVTYN +I G C G L +A
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEA 544
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M+ P ++ + ++ L S A+ L +M G P VT ++N C G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A + + +R + + + ++ +I LC G+ AL + + +G + + V+Y +
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI GLC G+ + LR++ G+ IIP+VV ++ +ID K+ + A LY+EMI +G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
I+P+ +TYN+LI GFC L +A + D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFD 374
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 35/227 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P I+ ++ ++ S K K + L R++ G+ P+ +T + L+ C G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF---------------HDV 105
+A + ++ RG P+ +T+ L+ GLC G +++AL+ +++
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 106 VL--------------------AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
++ +G + + V+Y +I GLCK G S A R+++
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
P+ YN +I + + + + L EM V G S + T +I
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 161 bits (407), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 131/245 (53%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P I+EFNK+L+++ K K + ISL +M+ I L T +ILINC C Q
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 61 TTSAFSVLANILKRGFQPT-----------------------------------TITFTT 85
+ A ++L ++K G++P+ TITFTT
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GL L A+ D ++ +G + N V+YG ++NGLCK G+T AL L ++E
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I +VV++NTIIDSLCK V A NL+ EM KGI PNVVTY++LI C G+ A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 206 GLLDE 210
LL +
Sbjct: 316 QLLSD 320
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 119/244 (48%), Gaps = 35/244 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +I ++ FN ++ SL K +H A++L ++ME GI P++VT S LI+C C G+
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 61 TTSAFSVLANIL-----------------------------------KRGFQPTTITFTT 85
+ A +L++++ KR P T+ +
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
L+ G C+ + +A Q + ++++ + V+Y TLI G CK E R++ +
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
++ + V Y T+I L D +A ++ +M+ G+ P+++TY+ L+ G C G+L++A+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 206 GLLD 209
+ D
Sbjct: 491 EVFD 494
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M P I F ++ L S A++L +M G P+LVT +++N C G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A ++L + + + F T+I LC +V AL + +G R N V+Y +
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ LC G S A + L + + I PN+V +N +ID+ K+ A LY +MI +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
I P++ TYN+L+ GFC+ +L +A
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKA 384
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 35/243 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P ++ FN ++ + VK + A L M I P + T + L+N C +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLC-----------LRGNVHRALQ-------- 101
A + ++ + P +T+ TLIKG C R HR L
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 102 -----FHD-----------VVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
FHD +++ G + ++Y L++GLC G+ ALE ++
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I ++ +Y T+I+ +CK V +L+ + +KG+ PNVVTYN +I G C L++A
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 206 GLL 208
LL
Sbjct: 561 ALL 563
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ +N ++ K+K L R+M G+ VT + LI + G +A V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++ G P +T++ L+ GLC G + +AL+ D + +L+ Y T+I G+CK
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ + + + + PNVV YNT+I LC L+ A L +M G PN T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YN LI G + L+ E
Sbjct: 578 YNTLIRAHLRDGDKAASAELIRE 600
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ + ++ L A + +QM G+ P ++T SIL++ C G+ A V
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ K + +TT+I+G+C G V + +G + N V+Y T+I+GLC
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 555
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
A L++++ +PN YNT+I + +D + + L EM
Sbjct: 556 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 64/142 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P I+ ++ +L L A+ + M+ + I + + +I C G+
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + ++ +G +P +T+ T+I GLC + + A + G N +Y T
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580
Query: 121 LINGLCKMGETSAALEFLRQIE 142
LI + G+ +A+ E +R++
Sbjct: 581 LIRAHLRDGDKAASAELIREMR 602
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 160 bits (405), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 131/245 (53%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P I EFNK+L+++ K K + ISL +M+ GI+ +L T +ILINC C Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 61 TTSAFSVLANILKRGFQPT-----------------------------------TITFTT 85
+ A ++L ++K G++P+ TITFTT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GL L A+ D ++ +G + N V+YG ++NGLCK G+ A L ++E
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I +VV++NTIIDSLCK V A NL+ EM KGI PNVVTY++LI C G+ A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 206 GLLDE 210
LL +
Sbjct: 241 QLLSD 245
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +I ++ FN ++ SL K +H A++L ++ME GI P++VT S LI+C C G+
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L++++++ P +TF LI G A + HD ++ + + +Y +
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING C A + + + P++ YNT+I CK V L+ EM +G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ + VTY LI G G A
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNA 379
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M P I F ++ L S A++L +M G P+LVT +++N C G
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF++L + + + F T+I LC +V AL + +G R N V+Y +
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ LC G S A + L + + I PN+V +N +ID+ K+ A L+ +MI +
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
I P++ TYN+LI GFC+ +L +A
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKA 309
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 35/243 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P ++ FN ++ + VK + A L M I P + T + LIN C +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLC-----------LRGNVHRALQ-------- 101
A + ++ + P T+ TLIKG C R HR L
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 102 -----FHD-----------VVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
FHD +++ G + ++Y L++GLC G+ ALE ++
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I ++ +Y T+I+ +CK V +L+ + +KG+ PNVVTYN +I G C L++A
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 206 GLL 208
LL
Sbjct: 486 ALL 488
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N ++ K+K L R+M G+ VT + LI + G +A V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++ G P +T++ L+ GLC G + +AL+ D + +L+ Y T+I G+CK
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ + + + + PNVV YNT+I LC L+ A L +M G P+ T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YN LI G + L+ E
Sbjct: 503 YNTLIRAHLRDGDKAASAELIRE 525
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
A + +QM G+ P ++T SIL++ C G+ A V + K + +TT+
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
I+G+C G V + +G + N V+Y T+I+GLC A L++++
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+P+ YNT+I + +D + + L EM
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREM 526
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 131/245 (53%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P I+EF+K+L+++ K + ISL QM+ GI+ +L T SILINC C Q
Sbjct: 72 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ 131
Query: 61 TTSAFSVLANILK-----------------------------------RGFQPTTITFTT 85
+ A +VLA ++K G+QP + TF T
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GL A+ D ++ +G + + V+YG ++NGLCK G+ AL L+++E
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I P VV+YNTIID+LC V+ A NL++EM KGI PNVVTYN+LI C G+ A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 206 GLLDE 210
LL +
Sbjct: 312 RLLSD 316
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M P FN ++ L + S A++L +M + G P LVT I++N C G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S+L + + +P + + T+I LC NV+ AL + +G R N V+Y +
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI LC G S A L + + I PNVV ++ +ID+ K+ + A LY EMI +
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
I P++ TY++LI GFC+ +L +A
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEA 380
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q +I P ++ +N ++ +L K+ + A++L +M+ GI P++VT + LI C C G+
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L+++++R P +TF+ LI G + A + +D ++ + + +Y +
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING C A + + PNVV YNT+I CK V L+ EM +G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 181 ISPNVVTYNALIYGF 195
+ N VTY LI+GF
Sbjct: 427 LVGNTVTYTTLIHGF 441
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P ++ F+ ++ + VK A L +M I P + T S LIN C +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ + P +T+ TLIKG C V ++ + +G N V+Y T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 121 LI-----------------------------------NGLCKMGETSAALEFLRQIEGQL 145
LI +GLC G+ AL ++
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ P++ YN +I+ +CK V +L+ + +KG+ PNVVTY ++ GFC G ++A
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 206 GLLDE 210
L E
Sbjct: 557 ALFRE 561
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P ++ +N ++ K K + L R+M G+ + VT + LI+ +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A V ++ G P +T++ L+ GLC G V AL + + + +Y
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G+CK G+ + + + + PNVV Y T++ C+ L A L+ EM +G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ TYN LI G + L+ E
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + + + ++ + + A + +QM G+ P ++T SIL++ C G+
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A V + + +P T+ +I+G+C G V + +G + N V+Y T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+++G C+ G A R+++ + +P+ YNT+I + +D + + L EM
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%)
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A ++ +++K P+ + F+ L+ + + + + G N +Y
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
LIN C+ + S AL L ++ P++V N++++ C N +S A +L +M+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G P+ T+N LI+G + +A+ L+D
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDR 211
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 130/245 (53%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P I+EFNK+L+++ K + ISL QM+ GI+ L T SI INC C Q
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 61 TTSAFSVLANILK-----------------------------------RGFQPTTITFTT 85
+ A +VLA ++K G++P T TFTT
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GL L A+ D ++ +G + + V+YGT++NGLCK G+ AL L+++E
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I +VV+YNTIID LCK + A NL++EM KGI P+V TY++LI C G+ A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 206 GLLDE 210
LL +
Sbjct: 314 RLLSD 318
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 100/195 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +I ++ +N ++ L K KH A++L +M+ GI P + T S LI+C C G+
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L+++++R P +TF+ LI G + A + +D ++ + + +Y +
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING C A + + PNVV Y+T+I CK V L+ EM +G
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 181 ISPNVVTYNALIYGF 195
+ N VTY LI+GF
Sbjct: 429 LVGNTVTYTTLIHGF 443
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M P F ++ L S A++L QM G P LVT ++N C G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S+L + K + + + T+I GLC ++ AL + +G R + +Y +
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ LC G S A L + + I PNVV ++ +ID+ K+ + A LY EMI +
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
I P++ TY++LI GFC+ +L +A
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEA 382
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 35/243 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P ++ F+ ++ + VK A L +M I P + T S LIN C +
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLC-------------------LRGN------ 95
A + ++ + P +T++TLIKG C L GN
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 96 -VHRALQFHDVVLAQ---------GFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
+H Q D AQ G N ++Y L++GLCK G+ + A+ ++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ P++ YN +I+ +CK V L+ + +KG+SPNV+ YN +I GFC G ++A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 206 GLL 208
LL
Sbjct: 559 SLL 561
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P ++ ++ ++ K K + L R+M G+ + VT + LI+
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A V ++ G P +T+ L+ GLC G + +A+ + + + +Y
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G+CK G+ E + + + PNV+ YNT+I C+ A +L +M G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN TYN LI G + + L+ E
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKE 598
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + + + ++ + + A + +QM G+ P+++T +IL++ C G+
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V + + +P T+ +I+G+C G V + + +G N ++Y T
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G C+ G A L++++ +PN YNT+I + +D + L EM G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 181 ISPNVVT 187
+ + T
Sbjct: 604 FAGDAST 610
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 67/151 (44%)
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A + +++K P+ + F L+ + + + + G + +Y
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
IN C+ + S AL L ++ P++V +++++ C +S A L +M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G P+ T+ LI+G + + +A+ L+D+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 156 bits (395), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 127/245 (51%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P IIEF+K+L+++ K + ISL QM+ GI + T SILINC C Q
Sbjct: 72 MVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 131
Query: 61 TTSAFSVLANILK-----------------------------------RGFQPTTITFTT 85
A +VL ++K G+QP T+TF T
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GL L A+ D ++A+G + + V+YG ++NGLCK G+T A L ++E
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ P V++YNTIID LCK + A NL+ EM KGI PNVVTY++LI C G+ A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 206 GLLDE 210
LL +
Sbjct: 312 RLLSD 316
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q ++ P ++ +N ++ L K KH A++L ++ME GI P++VT S LI+C C G+
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L+++++R P TF+ LI G + A + +D ++ + + V+Y +
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING C A + + + P+VV YNT+I CK V ++ EM +G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ N VTYN LI G G A + E
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P + F+ ++ + VK A L +M I PS+VT S LIN C +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ + P +T+ TLIKG C V ++ + +G N V+Y
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI GL + G+ A E +++ + PN++ YNT++D LCK+ + A ++ +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ P + TYN +I G C G+++ L
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 38/246 (15%)
Query: 3 QMRIT---PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLG 59
QM +T P + FN ++ L S A++L +M G P LVT +++N C G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
T AF++L + + +P + + T+I GLC ++ AL + +G R N V+Y
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+LI+ LC G S A L + + I P+V ++ +ID+ K+ + A LY EM+ +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 180 GISP-----------------------------------NVVTYNALIYGFCIVGQLKQA 204
I P +VVTYN LI GFC ++++
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 205 IGLLDE 210
+ + E
Sbjct: 416 MEVFRE 421
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P ++ +N ++ K K + + R+M G+ + VT +ILI G
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ G P +T+ TL+ GLC G + +A+ + + +Y
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G+CK G+ + + + + P+VV YNT+I C+ A L+ EM G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN YN LI G + + L+ E
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKE 596
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + + +N ++ L + A + ++M G+ P+++T + L++ C G+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V + + +PT T+ +I+G+C G V + +G + + V+Y T
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G C+ G A ++++ +PN YNT+I + +D + L EM G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 181 ISPNVVT 187
+ + T
Sbjct: 602 FAGDAST 608
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%)
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A ++ ++K P+ I F+ L+ + + + + G N +Y LI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
N C+ + AL L ++ PN+V +++++ C +S A L +M V G
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLD 209
PN VT+N LI+G + + +A+ L+D
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALID 210
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 154 bits (388), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 132/245 (53%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHC---- 56
M Q R P IIEF+K+L+++ K + IS +MEI GI+ +L T +ILINC C
Sbjct: 69 MAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 128
Query: 57 -------------------------------YLGQTTSAFSVLANILKRGFQPTTITFTT 85
+ + + A +++ +++ G++P T+TFTT
Sbjct: 129 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 188
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GL L A+ D ++ +G + + V+YG ++NGLCK G+T AL L ++E
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I NVV+Y+T+IDSLCK A NL++EM KG+ PNV+TY++LI C G+ A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 206 GLLDE 210
LL +
Sbjct: 309 RLLSD 313
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 109/195 (55%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +I ++ ++ V+ SL K +H A++L +ME G+ P+++T S LI+C C G+
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L+++++R P +TF+ LI +G + +A + ++ ++ + N +Y +
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING C + A + L + + +PNVV YNT+I+ CK V L+ EM +G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 181 ISPNVVTYNALIYGF 195
+ N VTY LI+GF
Sbjct: 424 LVGNTVTYTTLIHGF 438
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 35/244 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+++ P I+ N +L S A++L QM G P VT + LI+ +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +++ +++RG QP +T+ ++ GLC RG+ AL + + A N V Y T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK------------------ 162
+I+ LCK AL ++E + + PNV+ Y+++I LC
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 163 --DNLVS---------------HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
NLV+ A LY EMI + I PN+ TY++LI GFC++ +L +A
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 206 GLLD 209
+L+
Sbjct: 379 QMLE 382
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P ++ F+ ++ + VK A L +M I P++ T S LIN C L +
Sbjct: 314 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L ++++ P +T+ TLI G C V + ++ + +G N V+Y T
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G + + A +Q+ + PN++ YN ++D LCK+ ++ A ++ +
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Query: 181 ISPNVVTYNALIYGFCIVGQLK 202
+ P++ TYN +I G C G+ K
Sbjct: 494 MEPDIYTYNIMIEGMCKAGKWK 515
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q P ++ + V+ L K A++L +ME I ++V S +I+ C
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ + +G +P IT+++LI LC G A + ++ + N V++
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ K G+ A + ++ + I PN+ Y+++I+ C + + A + MI K
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PNVVTYN LI GFC ++ + + L E
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 154 bits (388), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 129/245 (52%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q R P I+EFNK+L+++ K + ISL +M+ I+ L + +ILINC C Q
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 61 TTSAFSVLANILKRGF-----------------------------------QPTTITFTT 85
A +VL ++K G+ QP T+TF T
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNT 190
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GL L A+ D ++A+G + + +YGT++NGLCK G+ AL L+++E
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I +VV+Y TIID+LC V+ A NL++EM KGI PNVVTYN+LI C G+ A
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 206 GLLDE 210
LL +
Sbjct: 311 RLLSD 315
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M M P + FN ++ L S A++L +M G P L T ++N C G
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S+L + K + + +TT+I LC NV+ AL + +G R N V+Y +
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI LC G S A L + + I PNVV ++ +ID+ K+ + A LY EMI +
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
I P++ TY++LI GFC+ +L +A
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEA 379
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 103/200 (51%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P ++ +N ++ L +S A L M I P++VT S LI+ G+ A
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ ++KR P T+++LI G C+ + A ++++++ N V+Y TLI G
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK +E R++ + ++ N V YNT+I L + A ++ +M+ G+ P++
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 186 VTYNALIYGFCIVGQLKQAI 205
+TY+ L+ G C G+L++A+
Sbjct: 466 ITYSILLDGLCKYGKLEKAL 485
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +I ++ + ++ +L K+ + A++L +M+ GI P++VT + LI C C G+
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L+++++R P +TF+ LI G + A + +D ++ + + +Y +
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING C A + + PNVV YNT+I CK V L+ EM +G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ N VTYN LI G G A
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMA 449
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P ++ F+ ++ + VK A L +M I P + T S LIN C +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ + P +T+ TLIKG C V ++ + +G N V+Y T
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 121 LI-----------------------------------NGLCKMGETSAALEFLRQIEGQL 145
LI +GLCK G+ AL ++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ P++ YN +I+ +CK V +L+ + +KG+ PNV+ Y +I GFC G ++A
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 206 GLLDE 210
L E
Sbjct: 556 ALFRE 560
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P ++ +N ++ K K + L R+M G+ + VT + LI G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ G P IT++ L+ GLC G + +AL + + + +Y
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G+CK G+ + + + + PNV++Y T+I C+ L A L+ EM G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN TYN LI G + L+ E
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + + +N ++ L + A + ++M G+ P ++T SIL++ C G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V + K +P T+ +I+G+C G V + +G + N + Y T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G C+ G A R+++ +PN YNT+I + +D + + L EM G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 181 ISPNVVTYNALI 192
+ T + +I
Sbjct: 601 FVGDASTISMVI 612
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 130/245 (53%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P I EFNK+L+++ K K + ISL +M+ GI+ +L T +ILINC C Q
Sbjct: 76 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 61 TTSAFSVLANILKRGFQPT-----------------------------------TITFTT 85
+ A ++L ++K G++P+ TITFTT
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GL L A+ D ++ +G + N V+YG ++NGLCK G+ A L ++E
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I NVV+Y+T+IDSLCK A NL++EM KG+ PNV+TY++LI C + A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 206 GLLDE 210
LL +
Sbjct: 316 RLLSD 320
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +I ++ ++ V+ SL K +H A++L +ME G+ P+++T S LI+C C +
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L+++++R P +TF LI G + A + +D ++ + + +Y +
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING C A + + PNVV YNT+I+ CK + L+ EM +G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 181 ISPNVVTYNALIYGF 195
+ N VTY LI+GF
Sbjct: 431 LVGNTVTYTTLIHGF 445
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 35/243 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P ++ FN ++ + VK A L +M I P + T S LIN C +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLC-------------------LRGN------ 95
A + ++ + P +T+ TLI G C L GN
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 96 -VHRALQFHDVVLAQ---------GFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
+H Q D AQ G N ++Y TL++GLCK G+ A+ ++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ P + YN +I+ +CK V +L+ + +KG+ P+V+ YN +I GFC G ++A
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 206 GLL 208
L
Sbjct: 561 ALF 563
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P ++ +N ++ K K + L R+M G+ + VT + LI+
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A V ++ G P +T+ TL+ GLC G + +A+ + + +Y
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G+CK G+ + + + + P+V++YNT+I C+ L A L+ +M G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 181 ISPNVVT 187
P+ T
Sbjct: 571 PLPDSGT 577
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 131/245 (53%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P I+EF+K+L+++ K K + IS +MEI G++ +L T +I+INC C Q
Sbjct: 56 MVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQ 115
Query: 61 TTSAFSVLANILK-----------------------------------RGFQPTTITFTT 85
+ A ++L ++K G+QP T+TFTT
Sbjct: 116 LSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 175
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
L+ GL A+ + ++ +G + + V+YG +INGLCK GE AL L ++E
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I +VV+Y+T+IDSLCK V A NL++EM KGI P+V TY++LI C G+ A
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 206 GLLDE 210
LL +
Sbjct: 296 RLLSD 300
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 109/204 (53%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M P + F ++ L + S A++L +M + G P LVT +IN C G+
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++L + K + + ++T+I LC +V AL + +G R + +Y +
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ LC G S A L + + I PNVV +N++ID+ K+ + A L+ EMI +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
I PN+VTYN+LI GFC+ +L +A
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEA 364
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +I ++ ++ V+ SL K +H A++L +M+ GI P + T S LI+C C G+
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L+++L+R P +TF +LI G + A + D ++ + N V+Y +
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING C A + + + +P+VV YNT+I+ CK V L+ +M +G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 181 ISPNVVTYNALIYGF 195
+ N VTY LI+GF
Sbjct: 411 LVGNTVTYTTLIHGF 425
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q I P I+ +N ++ A + M P +VT + LIN C +
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ ++ +RG T+T+TTLI G + A +++ G N ++Y T
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++GLCK G+ A+ ++ + P++ YN + + +CK V +L+ + +KG
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ P+V+ YN +I GFC G ++A L
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ +I P ++ FN ++ + K A L +M I P++VT + LIN C +
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ + P +T+ TLI G C V ++ + +G N V+Y T
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G + + A +Q+ + PN++ YNT++D LCK+ + A ++ +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ P++ TYN + G C G+++ L
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P ++ +N ++ K K + L R M G+ + VT + LI+
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A V ++ G P +T+ TL+ GLC G + +A+ + + + +Y
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+ G+CK G+ + + + + P+V+ YNT+I CK L A L+ +M G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ TYN LI G + L+ E
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKE 580
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%)
Query: 34 RQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLR 93
+QM G+ P+++T + L++ C G+ A V + K +P T+ + +G+C
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 94 GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMY 153
G V + +G + + ++Y T+I+G CK G A +++ +P+ Y
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
NT+I + +D + + L EM + + TY
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 70/151 (46%)
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A + ++K P+ + F+ L+ + + F + + G N +Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+IN LC+ + S AL L ++ P++V N++++ C N +S A L +M+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G P+ VT+ L++G + +A+ L++
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVER 195
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 125/239 (52%), Gaps = 35/239 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q R P I +F+++L+++ K K Y I L QM++ GI +L T +IL+NC C Q
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A S L ++K G +P+ +TF +L+ G C V+ AL D ++ G++ N V Y T
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC------------------- 161
+I+GLCK + AL+ L ++E I P+VV YN++I LC
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 162 ----------------KDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
K+ VS A Y EMI + + P++VTY+ LIYG C+ +L +A
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ M P ++ +N ++ L K+K A+ L +ME GI P +VT + LI+ C G+
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +++ + KR P TF LI G V A +F++ ++ + + V+Y
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI GLC A E + + P+VV Y+ +I+ CK V H L+ EM +G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ N VTY LI G+C G+L A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVA 380
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P + FN ++ + VK S A +M + P +VT S+LI C +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ +G P +T++ LI G C V ++ + +G N V+Y
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G C+ G+ + A E R++ + PN++ YN ++ LC + + A + ++M G
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ ++VTYN +I G C G++ A
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADA 450
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P I+ ++ ++ L A + M G P +VT SILIN +C +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + +RG T+T+T LI+G C G ++ A + ++ G N ++Y
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++GLC G+ AL L ++ + ++V YN II +CK V+ A ++Y + +G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ P++ TY ++ G G ++A L
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALF 489
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ ++ ++ K+K + L +M G+ + VT +ILI +C G+ A +
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++ G P IT+ L+ GLC G + +AL + G + V+Y +I G+CK
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
GE + A + + Q ++P++ Y T++ L K L A L+ +M GI PN
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + + + ++ + + A + R+M G+ P+++T ++L++ C G+
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +LA++ K G +T+ +I+G+C G V A + + QG + +Y T
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPN 149
++ GL K G A R+++ I+PN
Sbjct: 472 MMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 127/258 (49%), Gaps = 50/258 (19%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R ++ NKV+ V+ AISL R+MEI I ++ + +ILI C C +
Sbjct: 97 MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 61 TTSAFSVLANILKRGFQPTT---------------------------------------- 80
+ + S + K GFQP
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQ 216
Query: 81 ----------ITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
ITF TLI GLCL G V A + ++ +G ++ V+YGT++NG+CKMG+
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
T +AL L ++E I P+VV+Y+ IID LCKD S A L+SEM+ KGI+PNV TYN
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 191 LIYGFCIVGQLKQAIGLL 208
+I GFC G+ A LL
Sbjct: 337 MIDGFCSFGRWSDAQRLL 354
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+++ +TP +I FN ++ L A +L +M G+ +VT ++N C +G
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T SA ++L+ + + +P + ++ +I LC G+ A +L +G N +Y
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G C G S A LR + + I P+V+ +N +I + K+ + A L EM+ +
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
I P+ VTYN++IYGFC + A + D
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ I P + +N ++ +S A L R M I P ++T + LI+ G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +L R P T+T+ ++I G C A D++ + + V++ T
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNT 437
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+ C+ ++ LR+I + ++ N YNT+I C+ + ++ A +L+ EMI G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ P+ +T N L+YGFC +L++A+ L +
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFE 526
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +P ++ FN ++ + K + L R++ G+ + T + LI+ C +
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + ++ G P TIT L+ G C + AL+ +V+ L+ V+Y
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G+CK + A + + + P+V YN +I C + +S A L+ +M G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ TYN LI G G++ ++I L+ E
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 61/141 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P I N +L + + A+ L ++++ I V +I+I+ C +
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ + ++ G +P T+ +I G C + + A + G + +Y T
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 121 LINGLCKMGETSAALEFLRQI 141
LI G K GE ++E + ++
Sbjct: 613 LIRGCLKAGEIDKSIELISEM 633
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 54/110 (49%)
Query: 99 ALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIID 158
A+ F D ++ V +I +M A+ R++E + I N+ +N +I
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
C + +S + + + ++ G P+VVT+N L++G C+ ++ +A+ L
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 50/260 (19%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R ++ NKV+ V+ AISL R+MEI I ++ + +ILI C C +
Sbjct: 97 MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 61 TTSAFSVLANILKRGFQPTT---------------------------------------- 80
+ + S + K GFQP
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQ 216
Query: 81 ----------ITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
ITF TLI GLCL G V A + ++ +G ++ V+YGT++NG+CKMG+
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
T +AL L ++E I P+VV+Y+ IID LCKD S A L+SEM+ KGI+PNV TYN
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
+I GFC G+ A LL +
Sbjct: 337 MIDGFCSFGRWSDAQRLLRD 356
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+++ +TP +I FN ++ L A +L +M G+ +VT ++N C +G
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T SA ++L+ + + +P + ++ +I LC G+ A +L +G N +Y
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G C G S A LR + + I P+V+ +N +I + K+ + A L EM+ +
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
I P+ VTYN++IYGFC + A + D
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ I P + +N ++ +S A L R M I P ++T + LI+ G+
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +L R P T+T+ ++I G C A D++ + + V++ T
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNT 437
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+ C+ ++ LR+I + ++ N YNT+I C+ + ++ A +L+ EMI G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ P+ +T N L+YGFC +L++A+ L +
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFE 526
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +P ++ FN ++ + K + L R++ G+ + T + LI+ C +
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + ++ G P TIT L+ G C + AL+ +V+ L+ V+Y
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G+CK + A + + + P+V YN +I C + +S A L+ +M G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ TYN LI G G++ ++I L+ E
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 61/141 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P I N +L + + A+ L ++++ I V +I+I+ C +
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ + ++ G +P T+ +I G C + + A + G + +Y T
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 121 LINGLCKMGETSAALEFLRQI 141
LI G K GE ++E + ++
Sbjct: 613 LIRGCLKAGEIDKSIELISEM 633
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 54/110 (49%)
Query: 99 ALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIID 158
A+ F D ++ V +I +M A+ R++E + I N+ +N +I
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
C + +S + + + ++ G P+VVT+N L++G C+ ++ +A+ L
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 123/210 (58%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P I++F ++LT+ + Y T I S++ME+ GI+ L + +ILI+C C +
Sbjct: 62 MVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSR 121
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A SVL ++K G++P+ +TF +L+ G CL + A +++ G+ N V Y T
Sbjct: 122 LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNT 181
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+GLCK GE + ALE L ++E + + +VV YNT++ LC S A + +M+ +
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I+P+VVT+ ALI F G L +A L E
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 110/208 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ P ++ +N ++ L K + A+ L +ME G+ +VT + L+ CY G+
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L +++KR P +TFT LI +GN+ A + + ++ N V+Y +
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+INGLC G A + + + PNVV YNT+I CK +V L+ M +G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ ++ TYN LI+G+C VG+L+ A+ +
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIF 374
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 111/210 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + ++ +N +LT L + +S A + R M I P +VT + LI+ G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +++ P +T+ ++I GLC+ G ++ A + D++ ++G N V+Y T
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G CK ++ +++ + ++ YNT+I C+ + A +++ M+ +
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++P+++T+ L++G C+ G+++ A+ D+
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDD 411
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 35/243 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ I P ++ F ++ VK + A L ++M + + P+ VT + +IN C G+
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +G P +T+ TLI G C V ++ + +GF + +Y T
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPN------------------------------- 149
LI+G C++G+ AL+ + + + P+
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 150 ----VVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+V YN +I LCK + V A L+ + V+G+ P+ TY +I G C G ++A
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476
Query: 206 GLL 208
L+
Sbjct: 477 ELI 479
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ +N +++ K + + L ++M G + T + LI+ +C +G+ A +
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRAL-QFHDVVLAQGFRLNQVSYGTLINGLC 126
++ R P IT L+ GLC+ G + AL +F D+ ++ + + V+Y +I+GLC
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY-IGIVAYNIMIHGLC 432
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
K + A E ++ + + P+ Y +I LCK+ A L M +GI
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%)
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
AF++ ++ P+ + FT L+ + F + G + S+ LI
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+ C+ S AL L ++ P++V + +++ C N + A +L M+ G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PNVV YN LI G C G+L A+ LL+E
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNE 201
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 130/245 (53%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGIT------------------ 42
M++ R P I+EF+K+L+++ K + ISL QM+ GI+
Sbjct: 66 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQ 125
Query: 43 -----------------PSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTT 85
PS+VTL+ L+N C+ + + A +++ +++ G+QP T+TFTT
Sbjct: 126 LSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 185
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
L+ GL A+ + ++ +G + + V+YG +INGLCK GE AL L ++E
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I +VV+YNTIID LCK + A +L+++M KGI P+V TYN LI C G+ A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 206 GLLDE 210
LL +
Sbjct: 306 RLLSD 310
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M P + F ++ L + S A++L +M + G P LVT +IN C G+
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++L + K + + + T+I GLC ++ A + + +G + + +Y
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI-VK 179
LI+ LC G S A L + + I P++V +N +ID+ K+ + A LY EM+ K
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+VV YN LI GFC ++++ + + E
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQM-EITGITPSLVTLSILINCHCYLG 59
ML+ I P ++ FN ++ + VK A L +M + P +V + LI C
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ V + +RG T+T+TTLI G + A +++ G + ++Y
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
L++GLC G AL ++ + + ++V Y T+I++LCK V +L+ + +K
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G+ PNVVTY ++ GFC G ++A L E
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ +N ++ K K + + R+M G+ + VT + LI+ +A V
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++ G P +T+ L+ GLC GNV AL + + + +L+ V+Y T+I LCK
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ + + + + PNVV Y T++ C+ L A L+ EM G PN T
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 188 YNALI 192
YN LI
Sbjct: 534 YNTLI 538
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + + + ++ + + A + +QM G+ P ++T +IL++ C G
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A V + KR + +T+TT+I+ LC G V + +G + N V+Y T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+++G C+ G A +++ +PN YNT+I + +D + + L EM G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 181 ISPNVVTY 188
+ + T+
Sbjct: 562 FAGDASTF 569
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 37/245 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q R P I++F+KVL+ + K+K+Y ISL ME+ GI L + +I+INC C +
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGN------------------------- 95
A SV+ ++K G++P +T ++LI G C +GN
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFC-QGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 96 -----------VHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQ 144
V+ A++ D + G R + V+Y +L+ GLC G S A +R + +
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 145 LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
I+PNV+ + +ID K+ S A LY EM + + P+V TYN+LI G C+ G++ +A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 205 IGLLD 209
+LD
Sbjct: 299 KQMLD 303
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 104/199 (52%), Gaps = 3/199 (1%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ +N ++ L + +S A L R M + I P+++T + +I+ G+ + A +
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ +R P T+ +LI GLC+ G V A Q D+++ +G + V+Y TLING CK
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
+ R++ + ++ + + YNTII + A ++S M + PN+ TY+
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSI 386
Query: 191 LIYGFCIVGQLKQAIGLLD 209
L+YG C+ ++++A+ L +
Sbjct: 387 LLYGLCMNWRVEKALVLFE 405
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +M P ++ +N ++ K + A+ L +ME G+ VT + L+ C G+
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A ++ +++ R P ITFT +I G A++ ++ + + + +Y +
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LINGLC G A + L + + +P+VV YNT+I+ CK V L+ EM +G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ + +TYN +I G+ G+ A
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAA 368
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 3/208 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ I P +I F V+ VK +S A+ L +M + P + T + LIN C G+
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L ++ +G P +T+ TLI G C V + + +G + ++Y T
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G + G AA E +++ + PN+ Y+ ++ LC + V A L+ M
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
I ++ TYN +I+G C +G ++ A L
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLF 439
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 7/187 (3%)
Query: 1 MLQMRIT----PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHC 56
ML + +T P ++ +N ++ K+K L R+M G+ +T + +I +
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 57 YLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
G+ +A + + + R P T++ L+ GLC+ V +AL + + L+
Sbjct: 361 QAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+Y +I+G+CK+G A + R + + + P+VV Y T+I C+ + LY +M
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Query: 177 IVKGISP 183
G+ P
Sbjct: 478 QEDGLLP 484
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 112/204 (54%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ R P II+F ++L+ + K Y ISL QM+I GI P L T +I+++C C Q
Sbjct: 74 MVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQ 133
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A L ++K GF+P +TFT+L+ G C + A+ D +L GF+ N V+Y T
Sbjct: 134 PCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTT 193
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI LCK + A+E Q+ PNVV YN ++ LC+ A L +M+ +
Sbjct: 194 LIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR 253
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
I PNV+T+ ALI F VG+L +A
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEA 277
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 104/200 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+L M P ++ + ++ L K +H + A+ L QM G P++VT + L+ C +G+
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L +++KR +P ITFT LI G + A + ++V++ + +YG+
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LINGLC G A + +E PN V+Y T+I CK V ++ EM KG
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 181 ISPNVVTYNALIYGFCIVGQ 200
+ N +TY LI G+C+VG+
Sbjct: 359 VVANTITYTVLIQGYCLVGR 378
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ RI P +I F ++ + VK A L M + P + T LIN C G
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + + G P + +TTLI G C V ++ + +G N ++Y
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G C +G A E Q+ + P++ YN ++D LC + V A ++ M +
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ N+VTY +I G C +G+++ A L
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 6/213 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+QM + P + + ++ L A + ME G P+ V + LI+ C +
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + ++G TIT+T LI+G CL G A + + + ++ + +Y
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 121 LINGLCKMGETSAAL---EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
L++GLC G+ AL E++R+ E + N+V Y II +CK V A +L+ +
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDI---NIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
KG+ PNV+TY +I GFC G + +A L +
Sbjct: 461 SKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + + ++ K+K + + +M G+ + +T ++LI +C +G+ A V
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ R P T+ L+ GLC G V +AL + + + +N V+Y +I G+CK
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+G+ A + + + + PNV+ Y T+I C+ L+ A +L+ +M G PN
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Query: 188 Y 188
Y
Sbjct: 506 Y 506
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M R P I +N +L L A+ + M + ++VT +I+I C LG+
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
AF + ++ +G +P IT+TT+I G C RG +H A + GF N+ Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 115/203 (56%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ +N ++ K + L R M + G+ P+L++ +++IN C G+ V
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + +RG+ +T+ TLIKG C GN H+AL H +L G + ++Y +LI+ +CK
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G + A+EFL Q+ + + PN Y T++D + ++ A + EM G SP+VVT
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YNALI G C+ G+++ AI +L++
Sbjct: 418 YNALINGHCVTGKMEDAIAVLED 440
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 114/210 (54%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ +TP +I + ++ S+ K + + A+ QM + G+ P+ T + L++ G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ VL + GF P+ +T+ LI G C+ G + A+ + + +G + VSY T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+++G C+ + AL R++ + I P+ + Y+++I C+ AC+LY EM+ G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+ TY ALI +C+ G L++A+ L +E
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 106/200 (53%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ +N ++ K ++ A+ + +M G+TPS++T + LI+ C G A L
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ RG P T+TTL+ G +G ++ A + + GF + V+Y LING C G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
A+ L ++ + + P+VV Y+T++ C+ V A + EM+ KGI P+ +TY++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
LI GFC + K+A L +E
Sbjct: 491 LIQGFCEQRRTKEACDLYEE 510
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 112/209 (53%), Gaps = 3/209 (1%)
Query: 3 QMRIT---PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLG 59
QMR+ P + ++ + + + A + R+M G +PS+VT + LIN HC G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A +VL ++ ++G P ++++T++ G C +V AL+ ++ +G + + ++Y
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+LI G C+ T A + ++ + P+ Y +I++ C + + A L++EM+ K
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLL 208
G+ P+VVTY+ LI G + ++A LL
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 15/225 (6%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + ++P ++ ++ VL+ ++ A+ + R+M GI P +T S LI C +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A + +L+ G P T+T LI C+ G++ +ALQ H+ ++ +G + V+Y
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDS---------------LCKDNL 165
LINGL K T A L ++ + +P+ V Y+T+I++ C +
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 166 VSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++ A ++ M+ K P+ YN +I+G C G +++A L E
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 109/204 (53%), Gaps = 1/204 (0%)
Query: 8 PPIIEFNKVLTSLVKTK-HYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
P ++ +N VL + +++K + S A ++ ++M + ++P++ T +ILI C+ G A +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ + +G P +T+ TLI G C + + + +G N +SY +INGLC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
+ G L ++ + + V YNT+I CK+ A +++EM+ G++P+V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TY +LI+ C G + +A+ LD+
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQ 370
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 36/168 (21%)
Query: 79 TTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL------------------------- 113
T+ F ++K + +AL + A GF
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 114 -----------NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK 162
N +Y LI G C G AL ++E + +PNVV YNT+ID CK
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 163 DNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ L M +KG+ PN+++YN +I G C G++K+ +L E
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 116/210 (55%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ R P II+F K+L + K K + I+L ++I G++ L T ++L+NC C Q
Sbjct: 63 MVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQ 122
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S L ++K GF+P +TFT+LI G CL + A+ + ++ G + + V Y T
Sbjct: 123 PYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTT 182
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+ LCK G + AL Q+E I P+VVMY ++++ LC A +L M +
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I P+V+T+NALI F G+ A L +E
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNE 272
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M I P ++ + ++ SL K H + A+SL QME GI P +V + L+N C G+
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S+L + KR +P ITF LI G A + ++ ++ N +Y +
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING C G A + +E + P+VV Y ++I+ CK V A ++ EM KG
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 181 ISPNVVTYNALIYGFCIVGQ 200
++ N +TY LI GF VG+
Sbjct: 348 LTGNTITYTTLIQGFGQVGK 367
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 3/213 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +I P +I FN ++ + VK + A L +M I P++ T + LIN C G
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + +G P + +T+LI G C V A++ + +G N ++Y T
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM---I 177
LI G ++G+ + A E + + + PN+ YN ++ LC + V A ++ +M
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ G++PN+ TYN L++G C G+L++A+ + ++
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ + ++ K K A+ + +M G+T + +T + LI +G+ A V
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQ--GFRLNQVSYGTLING 124
++++ RG P T+ L+ LC G V +AL F D+ + G N +Y L++G
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
LC G+ AL + + + ++ Y II +CK V +A NL+ + KG+ PN
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 185 VVTYNALIYG 194
VVTY +I G
Sbjct: 495 VVTYTTMISG 504
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q +T I + ++ + + A + M G+ P++ T ++L++C CY G+
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 61 TTSAFSVLANILKR---GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS 117
A + ++ KR G P T+ L+ GLC G + +AL + + + + ++
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
Y +I G+CK G+ A+ + + + PNVV Y T+I L ++ L A L+ +M
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Query: 178 VKGIS 182
G+S
Sbjct: 523 EDGVS 527
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 81/182 (44%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A+S SR ++++ + ++ + Q A + ++++ P+ I FT L+
Sbjct: 21 ALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLN 80
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
+ + D + G + + L+N C+ + A FL ++ P
Sbjct: 81 VIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEP 140
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
++V + ++I+ C N + A ++ ++M+ GI P+VV Y +I C G + A+ L
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 209 DE 210
D+
Sbjct: 201 DQ 202
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 117/204 (57%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
TP ++ +N ++ + K AI M +G P+++T +I++ C G+ A
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+LA++L++GF P+ +TF LI LC +G + RA+ + + G + N +SY L++G C
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K + A+E+L ++ + P++V YNT++ +LCKD V A + +++ KG SP ++
Sbjct: 391 KEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TYN +I G G+ +AI LLDE
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDE 474
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I N +L S+ T + A L M G +PS+VT +ILIN C G A +
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + + G QP ++++ L+ G C + RA+++ + ++++G + V+Y T++ LCK
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ A+E L Q+ + P ++ YNT+ID L K A L EM K + P+ +T
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y++L+ G G++ +AI E
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHE 509
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q P + +N +L K K AI +M G P +VT + ++ C G+
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L + +G P IT+ T+I GL G +A++ D + A+ + + ++Y +
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ GL + G+ A++F + E I PN V +N+I+ LCK A + MI +G
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN +Y LI G G K+A+ LL+E
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNE 579
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 3/203 (1%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I +N +++ K + A+S+ +M ++ P +VT + ++ C G+ A V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L +L+R P IT+T LI+ C V A++ D + +G + V+Y L+NG+CK
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A++FL + PNV+ +N I+ S+C A L ++M+ KG SP+VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
+N LI C G L +AI +L++
Sbjct: 347 FNILINFLCRKGLLGRAIDILEK 369
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 3/200 (1%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+E N L +V+T M G P ++ + LI C LG+T A +L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ G P IT+ +I G C G ++ AL D + + V+Y T++ LC G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
A+E L ++ + P+V+ Y +I++ C+D+ V HA L EM +G +P+VVTYN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
L+ G C G+L +AI L++
Sbjct: 280 LVNGICKEGRLDEAIKFLND 299
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
MLQ P +I + ++ + + A+ L +M G TP +VT ++L+N C G+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A L ++ G QP IT +++ +C G A + +L +GF + V++
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LIN LC+ G A++ L ++ PN + YN ++ CK+ + A M+ +G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P++VTYN ++ C G+++ A+ +L++
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 107/207 (51%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+M ++P ++ +N +L SL + A+ + +M P ++T +ILI C
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A +L + RG P +T+ L+ G+C G + A++F + + + G + N +++ ++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+C G A + L + + P+VV +N +I+ LC+ L+ A ++ +M G
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLD 209
PN ++YN L++GFC ++ +AI L+
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 91/174 (52%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I+ +N +LT+L K A+ + Q+ G +P L+T + +I+ G+T A +
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + + +P TIT+++L+ GL G V A++F G R N V++ +++ GLCK
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
+T A++FL + + PN Y +I+ L + + A L +E+ KG+
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+P +I +N V+ L K AI L +M + P +T S L+ G+ A
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ G +P +TF +++ GLC RA+ F ++ +G + N+ SY LI GL
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 127 KMGETSAALEFLRQI 141
G ALE L ++
Sbjct: 566 YEGMAKEALELLNEL 580
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 7/145 (4%)
Query: 66 SVLANILKRGFQPTTITFTTLIKGLC-LRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
S + + G F TL G GN H + + F L V +
Sbjct: 58 SAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYS------SVNSSFALEDVESNNHLRQ 111
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
+ + GE +FL + +P+++ T+I C+ A + + G P+
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLD 209
V+TYN +I G+C G++ A+ +LD
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLD 196
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P I ++ ++ L + AI + E GI P+ VT + ++ C Q
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGF 111
T A L ++ RG +P ++T LI+GL G AL+ + + +G
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 116/197 (58%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I++F+++L ++ K Y ISL R +E+ GI+ L + + LI+C C + + A S
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L ++K GF+P+ +TF +L+ G C + A+ D ++ G+ N V Y T+I+ LC+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ + AL+ L+ ++ I P+VV YN++I L + + S+M+ GISP+V+T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 188 YNALIYGFCIVGQLKQA 204
++ALI + GQL +A
Sbjct: 257 FSALIDVYGKEGQLLEA 273
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 109/210 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +M I P ++ +N ++T L + + + + M GI+P ++T S LI+ + GQ
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +++R P +T+ +LI GLC+ G + A + +V++++GF N V+Y T
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING CK ++ L + + + YNT+ C+ S A + M+ G
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P++ T+N L+ G C G++ +A+ L++
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ +N ++ SL + +TA+ + + M+ GI P +VT + LI + G + +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L+++++ G P ITF+ LI G + A + ++ ++ + N V+Y +LINGLC
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A + L + + PN V YNT+I+ CK V + M G+ + T
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 188 YNALIYGFCIVGQLKQA 204
YN L G+C G+ A
Sbjct: 362 YNTLYQGYCQAGKFSAA 378
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q + P I+ +N ++ L A + + G P+ VT + LIN +C +
Sbjct: 280 MIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKR 339
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+L + + G T T+ TL +G C G A + +++ G + ++
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNI 399
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++GLC G+ AL L ++ + ++ YN II LCK + V A L+ + +KG
Sbjct: 400 LLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Query: 181 ISPNVVTYNALIYGF 195
+SP+V+TY ++ G
Sbjct: 460 VSPDVITYITMMIGL 474
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N ++ K K + + M G+ T + L +C G+ ++A V
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L ++ G P TF L+ GLC G + +AL + + + ++Y +I GLCK
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+ A + + + P+V+ Y T++ L + L A LY +M
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 92 LRGNVHRALQFHDVV-----LAQGFRLNQ-VSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LR +H +++F+D + +A+ L V + L+ + K+ + A + R +E
Sbjct: 51 LRSGLH-SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG 109
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I ++ + T+ID C+ +S A + +M+ G P++VT+ +L+ GFC V + +A+
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 206 GLLDE 210
L+D+
Sbjct: 170 SLVDQ 174
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 130 bits (328), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 120/244 (49%), Gaps = 35/244 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
MLQ R P I++F +VLT + K + I L +ME GI+ L + +ILI+C C +
Sbjct: 70 MLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSR 129
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A ++L ++K GF+P+ +T +L+ G C A+ D + GF N V Y T
Sbjct: 130 LSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNT 189
Query: 121 LINGLCKMGETSAALE-----------------------------------FLRQIEGQL 145
+INGLCK + + ALE LR + +
Sbjct: 190 VINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK 249
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I PNV+ + +ID+ K+ + A NLY EMI + + PNV TYN+LI GFCI G L A
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 309
Query: 206 GLLD 209
+ D
Sbjct: 310 YMFD 313
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 110/210 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I + +N +++ L + ++ A L R M I P+++ + LI+ G
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ +++R P T+ +LI G C+ G + A D+++++G + V+Y T
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G CK ++ ++ Q ++ + YNT+I C+ ++ A +++ M+ G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+SP++VTYN L+ C G++++A+ ++++
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P +I F ++ + VK + A +L ++M + P++ T + LIN C G
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ +G P +T+ TLI G C V ++ + QG + +Y T
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G C+ G+ + A + ++ + P++V YN ++D LC + + A + ++
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ +++TYN +I G C +LK+A L
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ +N ++T K+K + L +M G+ T + LI+ +C G+ A V
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++ G P +T+ L+ LC G + +AL + + ++ ++Y +I GLC+
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ A R + + + P+ + Y T+I LC+ L A L M G P+
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Query: 188 YN 189
Y+
Sbjct: 502 YD 503
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 130 bits (326), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 115/206 (55%), Gaps = 1/206 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P F V+ ++ A+ + QM G + S V+++++++ C G+ A
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 66 SVLANILKR-GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
+ + + + GF P TF TL+ GLC G+V A++ DV+L +G+ + +Y ++I+G
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
LCK+GE A+E L Q+ + PN V YNT+I +LCK+N V A L + KGI P+
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
V T+N+LI G C+ + A+ L +E
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEE 425
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 109/210 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
MLQ P + +N V++ L K A+ + QM +P+ VT + LI+ C Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + +G P TF +LI+GLCL N A++ + + ++G ++ +Y
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ LC G+ AL L+Q+E +V+ YNT+ID CK N A ++ EM V G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+S N VTYN LI G C +++ A L+D+
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ +P + +N ++++L K A L+R + GI P + T + LI C
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + +G +P T+ LI LC +G + AL + G + ++Y T
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G CK +T A E ++E + N V YNT+ID LCK V A L +MI++G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
P+ TYN+L+ FC G +K+A ++
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P FN ++ L K H AI + M G P + T + +I+ C LG+ A V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L ++ R P T+T+ TLI LC V A + V+ ++G + ++ +LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
A+E ++ + P+ YN +IDSLC + A N+ +M + G + +V+T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YN LI GFC + ++A + DE
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDE 495
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 1/206 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P +N++L LV +M + GI P + T ++LI C Q A
Sbjct: 150 LKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L ++ G P TFTT+++G G++ AL+ + ++ G + VS +++G
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 126 CKMGETSAALEFLRQIEGQL-IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
CK G AL F++++ Q P+ +NT+++ LCK V HA + M+ +G P+
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
V TYN++I G C +G++K+A+ +LD+
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQ 355
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 4/205 (1%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P + FN ++ L T+++ A+ L +M G P T ++LI+ C G+ A
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++L + G + IT+ TLI G C A + D + G N V+Y TLI+GL
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 126 CKMGETSAALEFLRQ--IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
CK A + + Q +EGQ P+ YN+++ C+ + A ++ M G P
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQ--KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLL 208
++VTY LI G C G+++ A LL
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLL 598
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 10/217 (4%)
Query: 4 MRITPPIIEF---------NKVLTSLVKTKHYSTAISLSRQME-ITGITPSLVTLSILIN 53
+RI ++EF N ++ K A++ ++M G P T + L+N
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 54 CHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
C G A ++ +L+ G+ P T+ ++I GLC G V A++ D ++ +
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
N V+Y TLI+ LCK + A E R + + I+P+V +N++I LC A L+
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
EM KG P+ TYN LI C G+L +A+ +L +
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +N ++ SL A+++ +QME++G S++T + LI+ C +T A +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ G ++T+ TLI GLC V A Q D ++ +G + ++ +Y +L+ C+
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ A + ++ + P++V Y T+I LCK V A L + +KGI+
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YN +I G + +AI L E
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFRE 635
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 2/203 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+I +N ++ K A + +ME+ G++ + VT + LI+ C + A ++
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
++ G +P T+ +L+ C G++ +A + + G + V+YGTLI+GLCK G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS-PNVVTY 188
A + LR I+ + I YN +I L + + A NL+ EM+ + + P+ V+Y
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Query: 189 NALIYGFCI-VGQLKQAIGLLDE 210
+ G C G +++A+ L E
Sbjct: 650 RIVFRGLCNGGGPIREAVDFLVE 672
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 128 bits (321), Expect = 3e-30, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
ITP ++ + +++ + A L +M G+ P VT + LIN +C G AF
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V ++++ G P +T+TTLI GLC G++ A + + G + N +Y +++NGL
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK G A++ + + E + + V Y T++D+ CK + A + EM+ KG+ P +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 186 VTYNALIYGFCIVGQLKQAIGLLD 209
VT+N L+ GFC+ G L+ LL+
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLN 585
Score = 125 bits (314), Expect = 2e-29, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 105/202 (51%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P + F +++ K H A + M G +P++VT + LI+ C G SA
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L + K G QP T+ +++ GLC GN+ A++ A G + V+Y TL++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK GE A E L+++ G+ + P +V +N +++ C ++ L + M+ KGI+PN
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 186 VTYNALIYGFCIVGQLKQAIGL 207
T+N+L+ +CI LK A +
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAI 618
Score = 121 bits (303), Expect = 4e-28, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 108/210 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ I P + + ++ K A +M ITP ++T + +I+ C +G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + +G +P ++TFT LI G C G++ A + H+ ++ G N V+Y T
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+GLCK G+ +A E L ++ + PN+ YN+I++ LCK + A L E G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++ + VTY L+ +C G++ +A +L E
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Score = 111 bits (278), Expect = 3e-25, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 115/211 (54%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYS-TAISLSRQMEITGITPSLVTLSILINCHCYLG 59
ML + + N LT L K + + TAI + R+ G+ ++ + +I+I+ C LG
Sbjct: 201 MLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLG 260
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A +L + +G+ P I+++T++ G C G + + + +V+ +G + N YG
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
++I LC++ + + A E ++ Q I+P+ V+Y T+ID CK + A + EM +
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I+P+V+TY A+I GFC +G + +A L E
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Score = 109 bits (273), Expect = 1e-24, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 101/195 (51%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+ +N V+ + + A L ME+ G TP +++ S ++N +C G+ + ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ ++G +P + + ++I LC + A + ++ QG + V Y TLI+G CK G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+ AA +F ++ + I P+V+ Y II C+ + A L+ EM KG+ P+ VT+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 190 ALIYGFCIVGQLKQA 204
LI G+C G +K A
Sbjct: 426 ELINGYCKAGHMKDA 440
Score = 104 bits (260), Expect = 3e-23, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 86/176 (48%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+M GI P V + LI+ C G +A + R P +T+T +I G C G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 95 NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
++ A + + +G + V++ LING CK G A + PNVV Y
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
T+ID LCK+ + A L EM G+ PN+ TYN+++ G C G +++A+ L+ E
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Score = 103 bits (258), Expect = 7e-23, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 102/210 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ + P I +N ++ L K+ + A+ L + E G+ VT + L++ +C G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L +L +G QPT +TF L+ G CL G + + + +LA+G N ++ +
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ C AA + + + + P+ Y ++ CK + A L+ EM KG
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
S +V TY+ LI GF + +A + D+
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Score = 102 bits (253), Expect = 3e-22, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 101/204 (49%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
TP +I ++ V+ + L M+ G+ P+ +I C + + A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ ++++G P T+ +TTLI G C RG++ A +F + ++ + ++Y +I+G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
++G+ A + ++ + + P+ V + +I+ CK + A +++ MI G SPNVV
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TY LI G C G L A LL E
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHE 481
Score = 100 bits (248), Expect = 9e-22, Method: Composition-based stats.
Identities = 53/210 (25%), Positives = 98/210 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q +P ++ + ++ L K +A L +M G+ P++ T + ++N C G
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ G T+T+TTL+ C G + +A + +L +G + V++
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+NG C G + L + + I PN +N+++ C N + A +Y +M +G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+ TY L+ G C +K+A L E
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 82/174 (47%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ + ++ + K+ A + ++M G+ P++VT ++L+N C G +L
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+L +G P TF +L+K C+R N+ A + + ++G + +Y L+ G CK
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
A ++++G+ +V Y+ +I K A ++ +M +G++ +
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 54.3 bits (129), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 58/141 (41%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML + P I+ FN ++ L M GI P+ T + L+ +C
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A ++ ++ RG P T+ L+KG C N+ A + +GF ++ +Y
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 121 LINGLCKMGETSAALEFLRQI 141
LI G K + A E Q+
Sbjct: 672 LIKGFLKRKKFLEAREVFDQM 692
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 128 bits (321), Expect = 3e-30, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
ITP ++ + +++ + A L +M G+ P VT + LIN +C G AF
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V ++++ G P +T+TTLI GLC G++ A + + G + N +Y +++NGL
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK G A++ + + E + + V Y T++D+ CK + A + EM+ KG+ P +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 186 VTYNALIYGFCIVGQLKQAIGLLD 209
VT+N L+ GFC+ G L+ LL+
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLN 585
Score = 125 bits (314), Expect = 2e-29, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 105/202 (51%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P + F +++ K H A + M G +P++VT + LI+ C G SA
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L + K G QP T+ +++ GLC GN+ A++ A G + V+Y TL++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK GE A E L+++ G+ + P +V +N +++ C ++ L + M+ KGI+PN
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 186 VTYNALIYGFCIVGQLKQAIGL 207
T+N+L+ +CI LK A +
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAI 618
Score = 121 bits (303), Expect = 4e-28, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 108/210 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ I P + + ++ K A +M ITP ++T + +I+ C +G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + +G +P ++TFT LI G C G++ A + H+ ++ G N V+Y T
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+GLCK G+ +A E L ++ + PN+ YN+I++ LCK + A L E G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++ + VTY L+ +C G++ +A +L E
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Score = 111 bits (278), Expect = 3e-25, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 115/211 (54%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYS-TAISLSRQMEITGITPSLVTLSILINCHCYLG 59
ML + + N LT L K + + TAI + R+ G+ ++ + +I+I+ C LG
Sbjct: 201 MLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLG 260
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A +L + +G+ P I+++T++ G C G + + + +V+ +G + N YG
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
++I LC++ + + A E ++ Q I+P+ V+Y T+ID CK + A + EM +
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I+P+V+TY A+I GFC +G + +A L E
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Score = 109 bits (273), Expect = 1e-24, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 101/195 (51%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+ +N V+ + + A L ME+ G TP +++ S ++N +C G+ + ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ ++G +P + + ++I LC + A + ++ QG + V Y TLI+G CK G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+ AA +F ++ + I P+V+ Y II C+ + A L+ EM KG+ P+ VT+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 190 ALIYGFCIVGQLKQA 204
LI G+C G +K A
Sbjct: 426 ELINGYCKAGHMKDA 440
Score = 104 bits (260), Expect = 3e-23, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 86/176 (48%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+M GI P V + LI+ C G +A + R P +T+T +I G C G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 95 NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
++ A + + +G + V++ LING CK G A + PNVV Y
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
T+ID LCK+ + A L EM G+ PN+ TYN+++ G C G +++A+ L+ E
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Score = 103 bits (258), Expect = 7e-23, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 102/210 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ + P I +N ++ L K+ + A+ L + E G+ VT + L++ +C G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L +L +G QPT +TF L+ G CL G + + + +LA+G N ++ +
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ C AA + + + + P+ Y ++ CK + A L+ EM KG
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
S +V TY+ LI GF + +A + D+
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Score = 102 bits (253), Expect = 3e-22, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 101/204 (49%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
TP +I ++ V+ + L M+ G+ P+ +I C + + A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ ++++G P T+ +TTLI G C RG++ A +F + ++ + ++Y +I+G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
++G+ A + ++ + + P+ V + +I+ CK + A +++ MI G SPNVV
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TY LI G C G L A LL E
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHE 481
Score = 100 bits (248), Expect = 9e-22, Method: Composition-based stats.
Identities = 53/210 (25%), Positives = 98/210 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q +P ++ + ++ L K +A L +M G+ P++ T + ++N C G
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ G T+T+TTL+ C G + +A + +L +G + V++
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+NG C G + L + + I PN +N+++ C N + A +Y +M +G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+ TY L+ G C +K+A L E
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 82/174 (47%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ + ++ + K+ A + ++M G+ P++VT ++L+N C G +L
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+L +G P TF +L+K C+R N+ A + + ++G + +Y L+ G CK
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
A ++++G+ +V Y+ +I K A ++ +M +G++ +
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 54.3 bits (129), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 58/141 (41%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML + P I+ FN ++ L M GI P+ T + L+ +C
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A ++ ++ RG P T+ L+KG C N+ A + +GF ++ +Y
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 121 LINGLCKMGETSAALEFLRQI 141
LI G K + A E Q+
Sbjct: 672 LIKGFLKRKKFLEAREVFDQM 692
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 38/248 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P + FN V+ +L KT + A + M++ G +P++V+ + LI+ +C LG
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 61 TTSAFSVLA-----------------NILKRGF---------------------QPTTIT 82
+ A NIL GF +P I+
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 83 FTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIE 142
+ +LI GLC G + A+ D +++ G + N ++Y LING CK AL+ ++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 143 GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLK 202
GQ +P MYN +ID+ CK + L EM +GI P+V TYN LI G C G ++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 203 QAIGLLDE 210
A L D+
Sbjct: 454 AAKKLFDQ 461
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ ++P + FN ++ K + ++ + ++M + P++++ + LIN C G+
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A S+ ++ G QP IT+ LI G C + AL V QG Y
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ CK+G+ ++E + I+P+V YN +I LC++ + A L+ ++ KG
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P++VT++ L+ G+C G+ ++A LL E
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKE 495
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 103/196 (52%), Gaps = 3/196 (1%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
++ +L+K + + ++M I P++ T +++IN C G+ A V+ ++ G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 76 FQPTTITFTTLIKGLCL---RGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
P +++ TLI G C G +++A ++ N ++ LI+G K
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
+++ +++ Q + PNV+ YN++I+ LC +S A ++ +M+ G+ PN++TYNALI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 193 YGFCIVGQLKQAIGLL 208
GFC LK+A+ +
Sbjct: 374 NGFCKNDMLKEALDMF 389
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML + P +I +N ++ L S AIS+ +M G+ P+L+T + LIN C
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ +G PTT + LI C G + + + +G + +Y
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI GLC+ G AA + Q+ + +P++V ++ +++ C+ A L EM G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSK-GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGL 207
+ P +TYN ++ G+C G LK A +
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNM 527
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 2/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P +I +N ++ K A+ + ++ G P+ ++LI+ +C LG+
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
F++ + + G P T+ LI GLC GN+ A + D + ++G + V++
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHI 475
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM-IVK 179
L+ G C+ GE+ A L+++ + P + YN ++ CK+ + A N+ ++M +
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ NV +YN L+ G+ G+L+ A LL+E
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDANMLLNE 566
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 82/147 (55%), Gaps = 3/147 (2%)
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
V +++R QP TF +I LC G +++A + + G N VSY TLI+G C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 127 KM---GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
K+ G+ A L+++ + PN+ +N +ID KD+ + + ++ EM+ + + P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLLDE 210
NV++YN+LI G C G++ +AI + D+
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDK 356
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P + +N ++ L + + A L Q+ G+ P LVT IL+ +C G+
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFH-DVVLAQGFRLNQVSYG 119
+ A +L + K G +P +T+ ++KG C GN+ A + + R+N SY
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLV 166
L+ G + G+ A L ++ + ++PN + Y + + + V
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 110 GFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHA 169
G++L+ +S L+ L K ++ +++ + I PNV +N +I++LCK ++ A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 170 CNLYSEMIVKGISPNVVTYNALIYGFCIV---GQLKQAIGLLDE 210
++ +M V G SPNVV+YN LI G+C + G++ +A +L E
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 110/209 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I ++ +N ++ L K H+ A +L +M GI P ++T S +I+ C G+
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A +L ++++R P +TF+ LI L G V A + + +L +G ++Y +
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G CK + A L + + P+VV ++T+I+ CK V + ++ EM +G
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
I N VTY LI+GFC VG L A LL+
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLN 275
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 89/138 (64%), Gaps = 4/138 (2%)
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+++ G +P +TFTTL+ GLC G V +AL D ++ +G + YGT+INGLCKMG+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
T +AL L ++E I +VV+YN IID LCKD HA NL++EM KGI P+V+TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 191 LIYGFCIVGQLKQAIGLL 208
+I FC G+ A LL
Sbjct: 117 MIDSFCRSGRWTDAEQLL 134
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 111/205 (54%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P +I ++ ++ S ++ ++ A L R M I P +VT S LIN G+ + A
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ ++L+RG PTTIT+ ++I G C + ++ A + D + ++ + V++ TLING
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK +E ++ + I+ N V Y T+I C+ + A +L + MI G++PN
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNY 286
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
+T+ +++ C +L++A +L++
Sbjct: 287 ITFQSMLASLCSKKELRKAFAILED 311
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ P ++ F ++ L A++L +M G P +IN C +G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T SA ++L+ + + + + + +I LC G+ A + +G + ++Y
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+ C+ G + A + LR + + I P+VV ++ +I++L K+ VS A +Y +M+ +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
I P +TYN++I GFC +L A +LD
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLD 205
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ ++ L K +A++L +ME T I +V + +I+ C G A ++ +
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+G P IT++ +I C G A Q ++ + + V++ LIN L K G+ S
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A E + + I P + YN++ID CK + ++ A + M K SP+VVT++ LI
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 193 YGFCIVGQLKQAIGLLDE 210
G+C ++ + + E
Sbjct: 224 NGYCKAKRVDNGMEIFCE 241
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 84/161 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +I P ++ F+ ++ +LVK S A + M GI P+ +T + +I+ C +
Sbjct: 137 MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L ++ + P +TF+TLI G C V ++ + +G N V+Y T
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
LI+G C++G+ AA + L + + PN + + +++ SLC
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ I P I +N ++ K + A + M +P +VT S LIN +C +
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + + +RG T+T+TTLI G C G++ A +V+++ G N +++ +
Sbjct: 232 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQS 291
Query: 121 LINGLCKMGETSAA---LEFLRQIEGQ 144
++ LC E A LE L++ EG
Sbjct: 292 MLASLCSKKELRKAFAILEDLQKSEGH 318
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 1/209 (0%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L R P + +N ++ L K Y A L R+M GI+P++++ S LIN C GQ
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGT 120
AFS L +LKRG P T ++L+KG LRG AL ++ ++ G + N V+Y T
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ G C G A+ +E PN+ Y ++I+ K + A ++++M+ G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
PNVV Y ++ C + K+A L++
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 5/203 (2%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N VL +L+ + R M+ G P++ T ++L+ C + A +
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + +G P +++TT+I +C G V + LA+ F Y LINGLCK
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVVSVYNALINGLCK 258
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ A E +R++ + I PNV+ Y+T+I+ LC + A + ++M+ +G PN+ T
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
++L+ G + G A+ L ++
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQ 341
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 1/195 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ +N ++ + A+S+ ME G +P++ T LIN G A
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ +L G P + +T +++ LC A +++ + + ++ I GL
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 126 CKMGETSAALEFLRQIEGQ-LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
C G A + RQ+E Q PN+V YN ++D L K N + A L E+ ++G+ +
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Query: 185 VVTYNALIYGFCIVG 199
TYN L++G C G
Sbjct: 528 SSTYNTLLHGSCNAG 542
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
Q R P I+ +N++L L K A L+R++ + G+ S T + L++ C G
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLA--QGFRLNQVSYGT 120
A ++ ++ G P IT +I C +G RA Q D+V + +R + +SY
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTN 605
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLV 166
+I GLC+ + L ++ I+P++ ++ +I+ D++V
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIV 651
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 3/198 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITG-ITPSLVTLSILINCHCYLG 59
M + P + FN + L A + RQME P++VT + L++
Sbjct: 448 MSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN 507
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A+ + I RG + ++ T+ TL+ G C G ALQ ++ G ++++
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMN 567
Query: 120 TLINGLCKMGETSAALEFLRQIE--GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
+I CK G+ A + L + + P+V+ Y +I LC+ N L MI
Sbjct: 568 MIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMI 627
Query: 178 VKGISPNVVTYNALIYGF 195
GI P++ T++ LI F
Sbjct: 628 SAGIVPSIATWSVLINCF 645
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 30/228 (13%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
F ++ L + L +QM++ G S +I+ + +G A + I
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIK 138
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G P+ + ++ L + + + GF N +Y L+ LCK +
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSH------------------------ 168
A + L ++ + P+ V Y T+I S+C+ LV
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCK 258
Query: 169 ------ACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
A L EM+ KGISPNV++Y+ LI C GQ++ A L +
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%)
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAAL 135
F+ T +TF +I+ L + G V + QGF ++ + ++I+ ++G A+
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 136 EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
E +I+ P+V +YN ++D+L +N + +Y +M G PNV TYN L+
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 196 CIVGQLKQAIGLLDE 210
C ++ A LL E
Sbjct: 192 CKNNKVDGAKKLLVE 206
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 122 bits (305), Expect = 2e-28, Method: Composition-based stats.
Identities = 64/199 (32%), Positives = 114/199 (57%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ F+ + VK+ +TA + ++M GI+P++VT +ILI C G+ AF +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
ILKRG +P+ +T+++LI G C GN+ ++ ++ G+ + V YG L++GL K G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A+ F ++ GQ I NVV++N++ID C+ N A ++ M + GI P+V T+
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 190 ALIYGFCIVGQLKQAIGLL 208
++ + G+L++A+ L
Sbjct: 536 TVMRVSIMEGRLEEALFLF 554
Score = 105 bits (263), Expect = 2e-23, Method: Composition-based stats.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 1/201 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I+ NKVL L A L + G P++VT LIN C G+ AF +
Sbjct: 252 IVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ +RG +P I ++TLI G G + + L +G +L+ V + + I+ K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+ + A +++ Q I PNVV Y +I LC+D + A +Y +++ +G+ P++VTY+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
+LI GFC G L+ L ++
Sbjct: 431 SLIDGFCKCGNLRSGFALYED 451
Score = 103 bits (256), Expect = 1e-22, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 99/205 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q I P +I ++ ++ K L Q G+ +V S I+ + G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A V +L +G P +T+T LIKGLC G ++ A + +L +G + V+Y +
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G CK G + + P+VV+Y ++D L K L+ HA +M+ +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAI 205
I NVV +N+LI G+C + + +A+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEAL 516
Score = 100 bits (249), Expect = 7e-22, Method: Composition-based stats.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 2/207 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML I+P ++ + ++ L + A + Q+ G+ PS+VT S LI+ C G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
S F++ +++K G+ P + + L+ GL +G + A++F +L Q RLN V + +
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G C++ AL+ R + I P+V + T++ + + A L+ M G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGL 207
+ P+ + Y LI FC +K IGL
Sbjct: 562 LEPDALAYCTLIDAFC--KHMKPTIGL 586
Score = 95.5 bits (236), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 101/204 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +I+ I N V+ L K A + + P +VT + +I +C L +
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + F P T+T T LI LC ++ A++ ++ +G + N V+YG
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++ K + + + +++ + I P++V Y+ IID LCK V A N++ + I
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ P+VV Y LI G+C VG+L +A
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEA 795
Score = 89.7 bits (221), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 90/198 (45%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ F ++ K A L + ME GI P L+ S LI+ + G +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ L +G + + F++ I G++ A + +L QG N V+Y LI GLC+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A QI + + P++V Y+++ID CK + LY +MI G P+VV
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 188 YNALIYGFCIVGQLKQAI 205
Y L+ G G + A+
Sbjct: 464 YGVLVDGLSKQGLMLHAM 481
Score = 84.7 bits (208), Expect = 4e-17, Method: Composition-based stats.
Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 37/241 (15%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLS--ILINCHCYLGQ 60
Q+ + P ++L SL+ + ++ GI PS V+ +L C G+
Sbjct: 174 QLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GE 232
Query: 61 TTSAFSVLANILKRGFQ----------------------------------PTTITFTTL 86
T A +++RGF+ P +TF TL
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
I G C RG + RA V+ +G + ++Y TLI+G K G + Q + +
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIG 206
+VV++++ ID K ++ A +Y M+ +GISPNVVTY LI G C G++ +A G
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 207 L 207
+
Sbjct: 413 M 413
Score = 80.9 bits (198), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 90/191 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+++ ++ P I+ +N ++ + A + +++T P+ VTL+ILI+ C
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + + ++G +P +T+ L+ ++ + + + + +G + VSY
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+GLCK G A Q ++P+VV Y +I CK + A LY M+ G
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Query: 181 ISPNVVTYNAL 191
+ P+ + AL
Sbjct: 807 VKPDDLLQRAL 817
Score = 77.4 bits (189), Expect = 7e-15, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 8/214 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSL----VTLSILINCHC 56
M +M + P + + ++ + K + + L M+ I+ + V + +L CH
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH- 615
Query: 57 YLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
+ A N+++ +P +T+ T+I G C + A + +++ F N V
Sbjct: 616 ---RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+ LI+ LCK + A+ + + PN V Y ++D K + + L+ EM
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
KGISP++V+Y+ +I G C G++ +A + +
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Score = 70.5 bits (171), Expect = 7e-13, Method: Composition-based stats.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 2/209 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML I ++ FN ++ + + A+ + R M I GI P + T + ++ G+
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + K G +P + + TLI C LQ D++ +
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 121 LINGLCKMGETSAALEFLRQ-IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+I+ L K A +F IEG++ P++V YNT+I C + A ++ + V
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKME-PDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLL 208
PN VT LI+ C + AI +
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 16 VLTSLVKTKHYSTAISLSRQ----MEITGITPSLVTLSILINCHCYLGQTTSAFSVLANI 71
+ T+L+ + I L ++ M G+ P +V + L+N C G +A +++ +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
++RG +P IT+TTLI G C G+V AL+ + G L++V + L+ G+CK G
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
A LR++ I P+ V Y ++D+ CK L EM G P+VVTYN L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 192 IYGFCIVGQLKQAIGLLD 209
+ G C +GQ+K A LLD
Sbjct: 527 LNGLCKLGQMKNADMLLD 544
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ FN ++ K + L QME + P + T S LIN C + A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ + KRG P + FTTLI G G + + + +L++G + + V Y TL+NG
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK G+ AA + + + + P+ + Y T+ID C+ V A + EM GI +
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
V ++AL+ G C G++ A L E
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALRE 475
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN ++ K + S A + ++ + P++V+ + LIN +C +G F + +
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
K +P T++ LI LC + A D + +G N V + TLI+G + GE
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
E +++ + + P++V+YNT+++ CK+ + A N+ MI +G+ P+ +TY LI
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 193 YGFCIVGQLKQAIGLLDE 210
GFC G ++ A+ + E
Sbjct: 423 DGFCRGGDVETALEIRKE 440
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+ R PI +L ++K T ++ G ++ +IL+N C G +
Sbjct: 198 KHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNIS 257
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A V I KR QPT ++F TLI G C GN+ + + R + +Y LI
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
N LCK + A ++ + +IPN V++ T+I ++ + Y +M+ KG+
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLD 209
P++V YN L+ GFC G L A ++D
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVD 404
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML + P I+ +N ++ K A ++ M G+ P +T + LI+ C G
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + + + G + + F+ L+ G+C G V A + +L G + + V+Y
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+++ CK G+ + L++++ +P+VV YN +++ LCK + +A L M+ G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Query: 181 ISPNVVTYNALIYG 194
+ P+ +TYN L+ G
Sbjct: 551 VVPDDITYNTLLEG 564
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%)
Query: 102 FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
F+ +L GF LN + L+N CK G S A + +I + + P VV +NT+I+ C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 162 KDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
K + L +M P+V TY+ALI C ++ A GL DE
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDE 335
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 120 bits (300), Expect = 8e-28, Method: Composition-based stats.
Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 3/199 (1%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N +L+ L K A L +ME GI P++V+ + ++ HC A V +NIL+
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 74 RGFQPTTITFTTLIKGLCLRG-NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+G +P T++ LI G C R + AL+ + + + +N V Y T+INGLCK+G+TS
Sbjct: 507 KGLKPNNYTYSILIDG-CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565
Query: 133 AALEFL-RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
A E L IE + + + + YN+IID K+ + A Y EM GISPNV+TY +L
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 192 IYGFCIVGQLKQAIGLLDE 210
+ G C ++ QA+ + DE
Sbjct: 626 MNGLCKNNRMDQALEMRDE 644
Score = 101 bits (252), Expect = 3e-22, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 100/205 (48%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I+P +I + ++ L K A+ + +M+ G+ + LI+ C SA
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++ + +L+ G P+ + +LI G GN+ AL + +L G R + +Y TLI+GL
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
K G A E +++ ++P+ ++Y I++ L K ++ EM ++PNV
Sbjct: 735 LKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV 794
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
+ YNA+I G G L +A L DE
Sbjct: 795 LIYNAVIAGHYREGNLDEAFRLHDE 819
Score = 90.1 bits (222), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 108/208 (51%), Gaps = 1/208 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+L+ + P ++ ++ + A+ + M + I + V +IN C +GQ
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 61 TTSAFSVLANIL-KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
T+ A +LAN++ ++ + +++ ++I G G + A+ ++ + G N ++Y
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+L+NGLCK ALE +++ + + ++ Y +ID CK + + A L+SE++ +
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGL 207
G++P+ YN+LI GF +G + A+ L
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDL 711
Score = 89.7 bits (221), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/208 (24%), Positives = 99/208 (47%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+ R+ + +N ++ K +A++ +M GI+P+++T + L+N C +
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A + + +G + + LI G C R N+ A +L +G +Q Y +LI
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+G +G AAL+ +++ + ++ Y T+ID L KD + A LY+EM G+
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ + Y ++ G GQ + + + +E
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEE 784
Score = 86.7 bits (213), Expect = 9e-18, Method: Composition-based stats.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 1/184 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ V+ + VK + AI L +M GI+ ++V + LI HC SA + +
Sbjct: 307 YTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
K G P ++TF+ LI+ G + +AL+F+ + G + T+I G K +
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHE 426
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
AL+ + + + NV + NTI+ LCK A L S+M +GI PNVV+YN ++
Sbjct: 427 EALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 193 YGFC 196
G C
Sbjct: 486 LGHC 489
Score = 83.6 bits (205), Expect = 8e-17, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 3/195 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML I+ ++ ++T K +A+ L +ME G +P+ VT S+LI G+
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVH-RALQFHDVVLAQGFRLNQVSYG 119
A + G P+ T+I+G L+G H AL+ D G N
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGW-LKGQKHEEALKLFDESFETGLA-NVFVCN 447
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
T+++ LCK G+T A E L ++E + I PNVV YN ++ C+ + A ++S ++ K
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507
Query: 180 GISPNVVTYNALIYG 194
G+ PN TY+ LI G
Sbjct: 508 GLKPNNYTYSILIDG 522
Score = 82.8 bits (203), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 94/185 (50%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I + ++ K + +A +L ++ G+ PS + LI+ LG +A +
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+LK G + T+TTLI GL GN+ A + + + A G +++ Y ++NGL K G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+ ++ +++ + PNV++YN +I ++ + A L+ EM+ KGI P+ T++
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833
Query: 190 ALIYG 194
L+ G
Sbjct: 834 ILVSG 838
Score = 78.2 bits (191), Expect = 3e-15, Method: Composition-based stats.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML++ + P N+ L++LV+ + A L +M G+ VT +L+ +
Sbjct: 189 MLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEK 248
Query: 61 TTSAFSVLANILKRGFQPTTI------------------------------------TFT 84
A VL+ ++RG +P ++ T+T
Sbjct: 249 PAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYT 308
Query: 85 TLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQ 144
++I +GN+ A++ D +L+ G +N V+ +LI G CK + +AL ++E +
Sbjct: 309 SVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKE 368
Query: 145 LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
PN V ++ +I+ K+ + A Y +M V G++P+V + +I G+ + ++A
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 205 IGLLDE 210
+ L DE
Sbjct: 429 LKLFDE 434
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 119 bits (297), Expect = 2e-27, Method: Composition-based stats.
Identities = 66/204 (32%), Positives = 112/204 (54%), Gaps = 8/204 (3%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ F+ + VK+ +TA + ++M GI+P++VT +ILI C G+ AF +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
ILKRG +P+ +T+++LI G C GN+ ++ ++ G+ + V YG L++GL K G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A+ F ++ GQ I NVV++N++ID C+ N A ++ M + GI P+V T+
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 190 ALIY------GFCIVGQLKQAIGL 207
++ FC +K IGL
Sbjct: 536 TVMRVSIMEDAFC--KHMKPTIGL 557
Score = 105 bits (263), Expect = 2e-23, Method: Composition-based stats.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 1/201 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I+ NKVL L A L + G P++VT LIN C G+ AF +
Sbjct: 252 IVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ +RG +P I ++TLI G G + + L +G +L+ V + + I+ K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+ + A +++ Q I PNVV Y +I LC+D + A +Y +++ +G+ P++VTY+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
+LI GFC G L+ L ++
Sbjct: 431 SLIDGFCKCGNLRSGFALYED 451
Score = 103 bits (256), Expect = 1e-22, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 99/205 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q I P +I ++ ++ K L Q G+ +V S I+ + G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A V +L +G P +T+T LIKGLC G ++ A + +L +G + V+Y +
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G CK G + + P+VV+Y ++D L K L+ HA +M+ +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAI 205
I NVV +N+LI G+C + + +A+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEAL 516
Score = 96.7 bits (239), Expect = 1e-20, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 41/245 (16%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML I+P ++ + ++ L + A + Q+ G+ PS+VT S LI+ C G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
S F++ +++K G+ P + + L+ GL +G + A++F +L Q RLN V + +
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTII------DSLCKD----------- 163
LI+G C++ AL+ R + I P+V + T++ D+ CK
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 164 --------------NLVSH----------ACNLYSEMIVKGISPNVVTYNALIYGFCIVG 199
N+V H A ++ +I + P++VTYN +I G+C +
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 200 QLKQA 204
+L +A
Sbjct: 622 RLDEA 626
Score = 95.5 bits (236), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 101/204 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +I+ I N V+ L K A + + P +VT + +I +C L +
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + F P T+T T LI LC ++ A++ ++ +G + N V+YG
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++ K + + + +++ + I P++V Y+ IID LCK V A N++ + I
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ P+VV Y LI G+C VG+L +A
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEA 766
Score = 89.7 bits (221), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 90/198 (45%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ F ++ K A L + ME GI P L+ S LI+ + G +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ L +G + + F++ I G++ A + +L QG N V+Y LI GLC+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A QI + + P++V Y+++ID CK + LY +MI G P+VV
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 188 YNALIYGFCIVGQLKQAI 205
Y L+ G G + A+
Sbjct: 464 YGVLVDGLSKQGLMLHAM 481
Score = 84.7 bits (208), Expect = 4e-17, Method: Composition-based stats.
Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 37/241 (15%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLS--ILINCHCYLGQ 60
Q+ + P ++L SL+ + ++ GI PS V+ +L C G+
Sbjct: 174 QLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GE 232
Query: 61 TTSAFSVLANILKRGFQ----------------------------------PTTITFTTL 86
T A +++RGF+ P +TF TL
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
I G C RG + RA V+ +G + ++Y TLI+G K G + Q + +
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIG 206
+VV++++ ID K ++ A +Y M+ +GISPNVVTY LI G C G++ +A G
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 207 L 207
+
Sbjct: 413 M 413
Score = 80.9 bits (198), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 90/191 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+++ ++ P I+ +N ++ + A + +++T P+ VTL+ILI+ C
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + + ++G +P +T+ L+ ++ + + + + +G + VSY
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+GLCK G A Q ++P+VV Y +I CK + A LY M+ G
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Query: 181 ISPNVVTYNAL 191
+ P+ + AL
Sbjct: 778 VKPDDLLQRAL 788
Score = 73.2 bits (178), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 46 VTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDV 105
V + +L CH + A N+++ +P +T+ T+I G C + A + ++
Sbjct: 577 VVIHLLFKCH----RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 106 VLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNL 165
+ F N V+ LI+ LCK + A+ + + PN V Y ++D K
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 166 VSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + L+ EM KGISP++V+Y+ +I G C G++ +A + +
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 8/215 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M P ++ + ++ L K A+ S +M I ++V + LI+ C L +
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIK------GLCLRGNVHRALQFHDVVLAQGFRLN 114
A V + G +P TFTT+++ C LQ D++ +
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571
Query: 115 QVSYGTLINGLCKMGETSAALEFLRQ-IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
+I+ L K A +F IEG++ P++V YNT+I C + A ++
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME-PDIVTYNTMICGYCSLRRLDEAERIF 630
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ V PN VT LI+ C + AI +
Sbjct: 631 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTA-ISLSRQMEITGITPSLVTLSILINCHCYLG 59
M ++ + P + N ++ +L + A + + +M G P T LI+ C G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A + ++++ PT +T+T+LI GLC NV A+++ + + ++G N +Y
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+L++GLCK G + A+E + + PN+V Y T+I LCK+ + A L M ++
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G+ P+ Y +I GFC + + ++A LDE
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 8/217 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ P ++ + ++ L +K+ A+ +M+ GI P++ T S L++ C G+
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A + ++ RG +P +T+TTLI GLC + A++ D + QG + + YG
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMY-------NTIIDSLCKDNLVSHACNLY 173
+I+G C + + A FL ++ I PN + + N ++ LC N S A LY
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLY 396
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
M +GIS V T +L+ C G+ ++A+ L+DE
Sbjct: 397 LSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDE 433
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +++ L + A L +M P++VT + LIN C A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + +G +P T+++L+ GLC G +A++ ++++A+G R N V+Y TLI GLCK
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ A+E L ++ Q + P+ +Y +I C + A N EMI+ GI+PN +T
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369
Query: 188 YN 189
+N
Sbjct: 370 WN 371
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLR-GNVHRALQFHDVVLAQGFRLNQVSY 118
Q AF N+ + G PT + LIK LC G V L+ + +G + +Y
Sbjct: 136 QLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTY 195
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
GTLI+GLC+ G A + ++ + P VV Y ++I+ LC V A EM
Sbjct: 196 GTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
KGI PNV TY++L+ G C G+ QA+ L +
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Query: 94 GNVHRALQ----FHDVVLAQGFRLN--QVSYGTLINGLCKMGETSAALEFLRQIEGQLII 147
G VHR FH + + F + Q +Y T++ L + + + A +F + + +
Sbjct: 97 GRVHRPFDSLRVFHKM---KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLP 153
Query: 148 PNVVMYNTIIDSLCK-DNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIG 206
P V N +I +LC+ D V ++ EM +G P+ TY LI G C G++ +A
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 207 LLDE 210
L E
Sbjct: 214 LFTE 217
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 76/178 (42%), Gaps = 8/178 (4%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P ++ + ++T L K + A+ L +M + G+ P +I+ C + +
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Query: 61 TTSAFSVLANILKRGFQPTTITFT-------TLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
A + L ++ G P +T+ +++GLC RA + + ++G +
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISV 406
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACN 171
+ +L+ LCK GE A++ + +I IP+ + +I +V A +
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASD 464
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 35/237 (14%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N ++ K A + +M +P VT +I+I C G+ A V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L +L QPT IT+T LI+ L G V AL+ D +L++G + + +Y T+I G+CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 128 MGETSAALEFLRQI--------------------------EGQLII---------PNVVM 152
G A E +R + EG+ ++ PNVV
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 153 YNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
Y+ +I +LC+D + A NL M KG++P+ +Y+ LI FC G+L AI L+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P ++ ++ ++T+L + A++L + M+ G+TP + LI C G+
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A L ++ G P + + T++ LC G +AL+ + G N SY T
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+ + L G+ AL + ++ I P+ + YN++I LC++ +V A L +M
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
P+VVTYN ++ GFC +++ AI +L+
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I +N +L +L+ + L +M P++VT SILI C G+ A ++
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + ++G P ++ LI C G + A++F + +++ G + V+Y T++ LCK
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ ALE ++ PN YNT+ +L A ++ EM+ GI P+ +T
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT 475
Query: 188 YNALIYGFCIVGQLKQAIGLL 208
YN++I C G + +A LL
Sbjct: 476 YNSMISCLCREGMVDEAFELL 496
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML + P + +N ++ + K A + R +E+ G P +++ +IL+ G+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
++ + P +T++ LI LC G + A+ ++ +G + SY
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI C+ G A+EFL + +P++V YNT++ +LCK+ A ++ ++ G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
SPN +YN + G +A+ ++ E
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +TP ++ ++ + + AI M G P +V + ++ C G+
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + + G P + ++ T+ L G+ RAL +++ G ++++Y +
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+ LC+ G A E L + P+VV YN ++ CK + + A N+ M+ G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN TY LI G G +A+ L ++
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELAND 568
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 1/194 (0%)
Query: 15 KVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKR 74
K+ ++ +Y ++ L M G P ++ + LI L A V+ IL++
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEK 152
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
QP + LI G C + A + D + ++ F + V+Y +I LC G+ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
L+ L Q+ P V+ Y +I++ + V A L EM+ +G+ P++ TYN +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 195 FCIVGQLKQAIGLL 208
C G + +A ++
Sbjct: 273 MCKEGMVDRAFEMV 286
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 56 CYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQ 115
C G + +L ++++G+ P I T LIKG N+ +A++ +++ G + +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 116 VSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSE 175
+Y LING CKM A L ++ + P+ V YN +I SLC + A + ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 176 MIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++ P V+TY LI + G + +A+ L+DE
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDE 253
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 74/170 (43%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I+ +N VL +L K A+ + ++ G +P+ + + + + G A +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ ++ G P IT+ ++I LC G V A + + + F + V+Y ++ G CK
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
A+ L + G PN Y +I+ + + A L ++++
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 108/210 (51%), Gaps = 2/210 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ + P +I +N ++ K A+ + ME ++P+ T + LI +C
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A VL +L+R P +T+ +LI G C GN A + ++ +G +Q +Y +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+ LCK A + +E + + PNVVMY +ID CK V A + +M+ K
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN +T+NALI+G C G+LK+A LL+E
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEAT-LLEE 591
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N +L SL + + +M + P++ T + ++N +C LG A ++ I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC------ 126
+ G P T+T+LI G C R ++ A + + + +G R N+V+Y LI+GLC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 127 -------KMGET----------------------SAALEFLRQIEGQLIIPNVVMYNTII 157
KM + S AL ++++E I PN+ Y +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 158 DSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
DSLC A L +M+ KG+ PNV+TYNALI G+C G ++ A+ +++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P + ++ SL K+K A L +E G+ P++V + LI+ +C G+ A
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L +L + P ++TF LI GLC G + A + ++ G + + LI+ L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
K G+ A +Q+ P+ Y T I + C++ + A ++ ++M G+SP++
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 186 VTYNALIYGFCIVGQLKQAIGLL 208
TY++LI G+ +GQ A +L
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVL 695
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +++P +N+++ K+ + L++ +E + P +VT + LI+ C G
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE-RKVLPDVVTYNSLIDGQCRSGN 477
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
SA+ +L+ + RG P T+T++I LC V A D + +G N V Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G CK G+ A L ++ + +PN + +N +I LC D + A L +M+ G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ P V T LI+ G A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHA 621
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ ++ P I +NK++ K + A ++ G+ P T + LI +C
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 61 TTSAFSVLANILKRGFQ-----------------------------------PTTITFTT 85
SAF V + +G + PT T+T
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LIK LC AL + G + N +Y LI+ LC + A E L Q+ +
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
++PNV+ YN +I+ CK ++ A ++ M + +SPN TYN LI G+C + +A+
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAM 447
Query: 206 GLLDE 210
G+L++
Sbjct: 448 GVLNK 452
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 18/227 (7%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML P + FN ++ L A L +M G+ P++ T +ILI+ G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+S +L G +P T+TT I+ C G + A + G + +Y +
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK----------------DN 164
LI G +G+T+ A + L+++ P+ + ++I L + N
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 165 LVSH--ACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
++ L +M+ ++PN +Y LI G C VG L+ A + D
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 29/204 (14%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A + +M G++P L T S LI + LGQT AF VL + G +P+ TF +LIK
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 89 ---------------GLCLRGNVHRALQFHDVV------LAQGFRLNQVSYGTLINGLCK 127
LC N+ ++F VV + N SY LI G+C+
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNM---MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICE 772
Query: 128 MGETSAA---LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
+G A + +++ EG I P+ +++N ++ CK + A + +MI G P
Sbjct: 773 VGNLRVAEKVFDHMQRNEG--ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 185 VVTYNALIYGFCIVGQLKQAIGLL 208
+ + LI G G+ ++ +
Sbjct: 831 LESCKVLICGLYKKGEKERGTSVF 854
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 19/229 (8%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+++ + P + ++ L+K + A S +QM +G P T + I +C G+
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++A + + G P T+++LIKG G + A + G +Q ++ +
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 121 LINGLCKMG------------------ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK 162
LI L +M E +E L ++ + PN Y +I +C+
Sbjct: 713 LIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICE 772
Query: 163 DNLVSHACNLYSEMIV-KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ A ++ M +GISP+ + +NAL+ C + + +A ++D+
Sbjct: 773 VGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLG 59
M++ +TP + K++ + + + A + M+ GI+PS + + L++C C L
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A V+ +++ G P + LI GL +G R +L G+ +++++
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870
Query: 120 TLINGLCKMGETSAALEFLRQIE 142
+I+G+ K G A E +E
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVME 893
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 115/205 (56%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + ++P ++ F ++ K A+SL ++M ++ ++VT + LI+ C G+
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + +++ +P ++ +TT+I G RG+ A++F +L QG RL+ +YG
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+GLC G+ A E + +E ++P++V++ T++++ K + A N+Y ++I +G
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAI 205
P+VV + +I G GQL +AI
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAI 393
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 1/203 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I+ FN + K K M + +P++VT S I+ C G+ A
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++ + P +TFT LI G C G++ A+ + + LN V+Y LI+G CK
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
GE A E ++ + PN ++Y TIID + +A ++M+ +G+ ++
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y +I G C G+LK+A ++++
Sbjct: 306 YGVIISGLCGNGKLKEATEIVED 328
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 99/201 (49%), Gaps = 4/201 (1%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
TP FN V++ + K A + M G P +++ + LI+ HC G SA
Sbjct: 53 TPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 67 VLANI-LKRGF--QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
VL ++ GF +P ++F +L G + + V+L + N V+Y T I+
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWID 171
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
CK GE AL+ ++ + PNVV + +ID CK + A +LY EM +S
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL 231
Query: 184 NVVTYNALIYGFCIVGQLKQA 204
NVVTY ALI GFC G++++A
Sbjct: 232 NVVTYTALIDGFCKKGEMQRA 252
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 5/210 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML + I + +++ L A + ME + + P +V + ++N + G+
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A ++ +++RGF+P + +T+I G+ G +H A+ + + A N V Y
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA-----NDVMYTV 408
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ LCK G+ +I ++P+ MY + I LCK + A L + M+ +G
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ +++ Y LIYG G + +A + DE
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDE 498
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 4/174 (2%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
G TP + + +++ C LGQ A ++ ++ + G +P I++ +LI G C G++ A
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 100 -LQFHDVVLAQGF--RLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTI 156
L + + GF + + VS+ +L NG KM ++ + + PNVV Y+T
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYM-GVMLKCCSPNVVTYSTW 169
Query: 157 IDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
ID+ CK + A + M +SPNVVT+ LI G+C G L+ A+ L E
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 30/211 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLS----------- 49
M + + P ++ F ++ + K+ A+++ ++ G P +V LS
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 50 -------------------ILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGL 90
+LI+ C G + + I + G P +T+ I GL
Sbjct: 389 LHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448
Query: 91 CLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
C +GN+ A + ++ +G L+ ++Y TLI GL G A + ++ I P+
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDS 508
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
+++ +I + K+ ++ A +L +M +G+
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 107/203 (52%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P + FN ++++ K A+ + R+M G P + T + LI+ C + + A
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L +++ G T+T+ TLI RG + A + + ++ QG L++++Y +LI GL
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ GE A ++ P+ + N +I+ LC+ +V A EM+++G +P++
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 634
Query: 186 VTYNALIYGFCIVGQLKQAIGLL 208
VT+N+LI G C G+++ + +
Sbjct: 635 VTFNSLINGLCRAGRIEDGLTMF 657
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 106/203 (52%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + FN +++ L + A+ L R M G+ + VT + LIN G+ A +
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ ++ +G IT+ +LIKGLC G V +A + +L G + +S LINGLC+
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A+EF +++ + P++V +N++I+ LC+ + ++ ++ +GI P+ VT
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
+N L+ C G + A LLDE
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDE 694
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 107/205 (52%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P + +N ++ K A+ + M G P++ + +IL++ C LG+ A+
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+VL + G +P T+ F LI C + A++ + +G + + ++ +LI+GL
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C++ E AL LR + + ++ N V YNT+I++ + + A L +EM+ +G +
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
+TYN+LI G C G++ +A L ++
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEK 589
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 32/242 (13%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML +I P + F V+ + +A+SL R M G P+ V LI+ +
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L + G P TF +I GLC ++ A + + +L +GF + ++YG
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 121 LINGLCKMGETSAALEFLRQI-----------------EGQL---------------IIP 148
L+NGLCK+G AA + +I G+L I+P
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+V YN++I K+ LV A + +M KG PNV +Y L+ GFC +G++ +A +L
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 209 DE 210
+E
Sbjct: 448 NE 449
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAIS-LSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
P I+ FN ++ V A + LS + GI P + T + LI + G A
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
VL ++ +G +P ++T L+ G C G + A + + A G + N V + LI+ C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K A+E R++ + P+V +N++I LC+ + + HA L +MI +G+ N V
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TYN LI F G++K+A L++E
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNE 554
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + + +N ++ + ++ A L +M G +T + LI C G+
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S+ +L+ G P+ I+ LI GLC G V A++F ++ +G + V++ +
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LINGLC+ G L R+++ + I P+ V +NT++ LCK V AC L E I G
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Query: 181 ISPNVVTYNALI 192
PN T++ L+
Sbjct: 700 FVPNHRTWSILL 711
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 8/214 (3%)
Query: 1 MLQMR----ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHC 56
ML+MR P +N VL LV + A ++ M I P+L T +++ C
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 57 YLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
+ + SA S+L ++ K G P ++ + TLI L V+ ALQ + + G +
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
++ +I GLCK + A + + ++ + P+ + Y +++ LCK V A +L+ +
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P +V +N LI+GF G+L A +L +
Sbjct: 349 ----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ P I N ++ L ++ A+ ++M + G TP +VT + LIN C G+
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
++ + G P T+TF TL+ LC G V+ A D + GF N ++
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 121 LINGL 125
L+ +
Sbjct: 710 LLQSI 714
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 113/209 (54%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ + P + ++ ++ + TA+S +M TG+ S+ + LIN HC G
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
++A +A ++ + +PT +T+T+L+ G C +G +++AL+ + + +G + ++ T
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++GL + G A++ ++ + PN V YN +I+ C++ +S A EM KG
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
I P+ +Y LI+G C+ GQ +A +D
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
++P + +N ++ SL K + + A L +M G+ P+ VT SILI+ C G+ +A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
S L ++ G + + + +LI G C G++ A F ++ + V+Y +L+ G
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C G+ + AL ++ G+ I P++ + T++ L + L+ A L++EM + PN
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
VTYN +I G+C G + +A L E
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKE 567
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + I P + + V+ SL + K S A + ME TG ++V ++LI+ C +
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ + +P +T+ TL+ GLC L+ D +L F ++ + +
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ GL K G+ AL ++++ + PN+ +YN +IDSLCK A L+ M G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ PN VTY+ LI FC G+L A+ L E
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 37/246 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q + ++ + ++ +K K L ++M G+ P V + +I+ G
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG-------------------------- 94
AF + ++ G P +T+T +I GLC G
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 95 ----------NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQ 144
++ +A++ H+ +L +G N +Y LI G C+ G A E + ++ G
Sbjct: 758 FLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD 816
Query: 145 LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
+ P+ + Y T+I+ LC+ N V A L++ M KGI P+ V YN LI+G C+ G++ +A
Sbjct: 817 GVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
Query: 205 IGLLDE 210
L +E
Sbjct: 877 TELRNE 882
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P I F +L+ L + A+ L +M + P+ VT +++I +C G + AF
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
L + ++G P T ++ LI GLCL G A F D + LN++ Y L++G
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ G+ AL +++ + + ++V Y +ID K L EM +G+ P+
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 186 VTYNALIYGFCIVGQLKQAIGLLD 209
V Y ++I G K+A G+ D
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWD 706
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ + ++ L K + + + + +M +PS +S L+ G+ A
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+++ ++ G P + LI LC H A D + G R N V+Y LI+
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ G+ AL FL ++ + +V YN++I+ CK +S A +EMI K + P V
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
VTY +L+ G+C G++ +A+ L E
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHE 497
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
++ + P + + +L LVK +H+ A+ L M GI P + + +I C L +
Sbjct: 185 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS 244
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A ++A++ G + + LI GLC + V A+ + + + + V+Y TL+
Sbjct: 245 RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
GLCK+ E LE + ++ P+ +++++ L K + A NL ++ G+S
Sbjct: 305 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 364
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLD 209
PN+ YNALI C + +A L D
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFD 391
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ +L + A+S+ ++M G+ LV +LI+ F +L +
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
RG +P + +T++I G+ A D+++ +G N+V+Y +INGLCK G +
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A +++ +PN V Y +D L K + I+KG+ N TYN LI
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794
Query: 193 YGFCIVGQLKQAIGLL 208
GFC G++++A L+
Sbjct: 795 RGFCRQGRIEEASELI 810
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
I K P T + L+ GL + A++ + +++ G R + Y +I LC++ +
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
S A E + +E N+V YN +ID LCK V A + ++ K + P+VVTY
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
L+YG C V + + + ++DE
Sbjct: 303 LVYGLCKVQEFEIGLEMMDE 322
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%)
Query: 38 ITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVH 97
+ G+ + T ++LI C G+ A ++ ++ G P IT+TT+I LC R +V
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 98 RALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPN 149
+A++ + + +G R ++V+Y TLI+G C GE A E ++ Q +IPN
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYL-- 58
M+ P + + V+ L K + A L +M+ P+ VT C+L
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG------CFLDI 761
Query: 59 ---GQTTSAFSV-LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLN 114
G+ +V L N + +G T T+ LI+G C +G + A + ++ G +
Sbjct: 762 LTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821
Query: 115 QVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYS 174
++Y T+IN LC+ + A+E + + I P+ V YNT+I C + A L +
Sbjct: 822 CITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881
Query: 175 EMIVKGISPN 184
EM+ +G+ PN
Sbjct: 882 EMLRQGLIPN 891
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 102/199 (51%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ + +N ++ L ++ + L R M I P+ VT + LIN G+ A
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L +L G P +TF LI G GN AL+ ++ A+G ++VSYG L++GL
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK E A F +++ + + Y +ID LCK+ + A L +EM GI P++
Sbjct: 419 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 478
Query: 186 VTYNALIYGFCIVGQLKQA 204
VTY+ALI GFC VG+ K A
Sbjct: 479 VTYSALINGFCKVGRFKTA 497
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
P + N +L S+VK+ + S ++M I P + T +ILIN C G +
Sbjct: 194 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 253
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++ + K G+ PT +T+ T++ C +G A++ D + ++G + +Y LI+ L
Sbjct: 254 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 313
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ + LR + ++I PN V YNT+I+ + V A L +EM+ G+SPN
Sbjct: 314 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 373
Query: 186 VTYNALIYGFCIVGQLKQAIGLL 208
VT+NALI G G K+A+ +
Sbjct: 374 VTFNALIDGHISEGNFKEALKMF 396
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
I + ++ L K A+ L +M GI P +VT S LIN C +G+ +A ++
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
I + G P I ++TLI C G + A++ ++ ++ +G + ++ L+ LCK G+
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
+ A EF+R + I+PN V ++ +I+ A +++ EM G P TY +
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 191 LIYGFCIVGQLKQA 204
L+ G C G L++A
Sbjct: 624 LLKGLCKGGHLREA 637
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
P I+ +N VL K + AI L M+ G+ + T ++LI+ C + +
Sbjct: 265 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 324
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+L ++ KR P +T+ TLI G G V A Q + +L+ G N V++ LI+G
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
G AL+ +E + + P+ V Y ++D LCK+ A Y M G+ +
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TY +I G C G L +A+ LL+E
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNE 468
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 103/204 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML ++P + FN ++ + ++ A+ + ME G+TPS V+ +L++ C +
Sbjct: 364 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 423
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + G IT+T +I GLC G + A+ + + G + V+Y
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING CK+G A E + +I + PN ++Y+T+I + C+ + A +Y MI++G
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ + T+N L+ C G++ +A
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEA 567
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 36/234 (15%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN ++TSL K + A R M GI P+ V+ LIN + G+ AFSV +
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQF----HDVV--------------------LA 108
K G PT T+ +L+KGLC G++ A +F H V LA
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 109 QGFRL-----------NQVSYGTLINGLCKMGETSAALEFLRQIEGQL-IIPNVVMYNTI 156
+ L + +Y +LI+GLC+ G+T A+ F ++ E + ++PN VMY
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730
Query: 157 IDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+D + K +M G +P++VT NA+I G+ +G++++ LL E
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 784
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
++ + R M + G PS+ T + ++ G+ S +S L +LKR P TF LI
Sbjct: 182 SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILIN 241
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
LC G+ ++ + G+ V+Y T+++ CK G AA+E L ++ + +
Sbjct: 242 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 301
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+V YN +I LC+ N ++ L +M + I PN VTYN LI GF G++ A LL
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361
Query: 209 DE 210
+E
Sbjct: 362 NE 363
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P + +N ++ A L +M G++P+ VT + LI+ H G
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + +G P+ +++ L+ GLC A F+ + G + +++Y
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+GLCK G A+ L ++ I P++V Y+ +I+ CK A + + G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAI 205
+SPN + Y+ LIY C +G LK+AI
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAI 533
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
++P I ++ ++ + + AI + M + G T T ++L+ C G+ A
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ + G P T++F LI G G +A D + G +YG+L+ GL
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK G A +FL+ + + VMYNT++ ++CK ++ A +L+ EM+ + I P+
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688
Query: 186 VTYNALIYGFCIVGQLKQAI 205
TY +LI G C G+ AI
Sbjct: 689 YTYTSLISGLCRKGKTVIAI 708
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 1/189 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +L L K H A + + V + L+ C G A S+
Sbjct: 616 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL-NQVSYGTLINGLC 126
+++R P + T+T+LI GLC +G A+ F A+G L N+V Y ++G+
Sbjct: 676 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 735
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K G+ A + F Q++ P++V N +ID + + +L EM + PN+
Sbjct: 736 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 795
Query: 187 TYNALIYGF 195
TYN L++G+
Sbjct: 796 TYNILLHGY 804
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I+P ++ ++ L + TA + +M I P V S ++ G+
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L +LK PT +FTTL+ C GNV AL+ V+ G +L+ VSY
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1044
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDS-LCKDNLVSHACNLYSEMIVK 179
LI GLC G+ + A E +++G + N Y +I L ++ S A + +++ +
Sbjct: 1045 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR 1104
Query: 180 GI 181
G
Sbjct: 1105 GF 1106
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N +LT++ K+ + + A+SL +M I P T + LI+ C G+T A
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 73 KRG-FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
RG P + +T + G+ G + F + + G + V+ +I+G +MG+
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
+ L ++ Q PN+ YN ++ K VS + LY +I+ GI P+ +T ++L
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 192 IYGFCIVGQLKQAIGLL 208
+ G C L+ + +L
Sbjct: 836 VLGICESNMLEIGLKIL 852
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN +++ + A L + M GI+ T +++ + + VL +
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
K+G P + + LI GLC G++ A + ++A V+ ++ L K G+
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A LR + ++P + + T++ CK+ V A L M G+ ++V+YN LI
Sbjct: 987 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046
Query: 193 YGFCIVGQLKQAIGLLDE 210
G C G + A L +E
Sbjct: 1047 TGLCAKGDMALAFELYEE 1064
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%)
Query: 83 FTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIE 142
+ LI+ G + +L+ ++ GF + + ++ + K GE + FL+++
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 143 GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLK 202
+ I P+V +N +I+ LC + + L +M G +P +VTYN +++ +C G+ K
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 203 QAIGLLD 209
AI LLD
Sbjct: 286 AAIELLD 292
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N +L K K ST+ L R + + GI P +T L+ C +
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + RG + TF LI C G ++ A V+ + G L++ + +++ L +
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ L ++ Q I P Y +I+ LC+ + A + EMI I P V
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 188 YNALIYGFCIVGQLKQAIGLL 208
+A++ G+ +A LL
Sbjct: 972 ESAMVRALAKCGKADEATLLL 992
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 67/160 (41%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+M GI+P LIN C +G +AF V ++ P + + +++ L G
Sbjct: 924 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 983
Query: 95 NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
A +L S+ TL++ CK G ALE + + ++V YN
Sbjct: 984 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
+I LC ++ A LY EM G N TY ALI G
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ----- 60
+ P + + + + K + I QM+ G TP +VT + +I+ + +G+
Sbjct: 720 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 61 ------------------------------TTSAFSVLANILKRGFQPTTITFTTLIKGL 90
+++F + +I+ G P +T +L+ G+
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Query: 91 CLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
C + L+ + +G +++ ++ LI+ C GE + A + ++ + I +
Sbjct: 840 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 899
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ ++ L +++ + + EM +GISP Y LI G C VG +K A + +E
Sbjct: 900 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 959
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 110/210 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P ++ +N ++ S + +S A L R M I P +VT S LIN +
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 95
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A + +L+ PTTIT+ ++I G C + V A + D + ++G + V++ T
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING CK +E ++ + I+ N V Y T+I C+ + A +L +EMI G
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++P+ +T++ ++ G C +L++A +L++
Sbjct: 216 VAPDYITFHCMLAGLCSKKELRKAFAILED 245
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 106/210 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q I ++ ++ L K ++ A +L +M GI P+++T + +I+ C+ G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +L +++++ P +TF+ LI V A + + +L ++Y +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G CK A L + + P+VV ++T+I+ CK V + ++ EM +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I N VTY LI+GFC VG L A LL+E
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNE 210
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ I P I +N ++ K A + M G +P +VT S LIN +C +
Sbjct: 106 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 165
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + + +RG T+T+TTLI G C G++ A + +++ G + +++
Sbjct: 166 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 121 LINGLCKMGETSAALEFLRQIE 142
++ GLC E A L ++
Sbjct: 226 MLAGLCSKKELRKAFAILEDLQ 247
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 96/167 (57%)
Query: 42 TPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ 101
P+ V+ SILI+ C +G+ AF + + ++G QP+T T+T LIK LC RG + +A
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 102 FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
D ++ +G + N +Y LI+GLC+ G+ A R++ I P+V+ YN +I+ C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 162 KDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
KD V A L + M + PNV T+N L+ G C VG+ +A+ LL
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
P + ++ ++ L + A L QM G PS T ++LI C G AF+
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ ++ RG +P T+T LI GLC G + A ++ + ++Y LING C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K G A E L +E + PNV +N +++ LC+ A +L M+ G+SP++V
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV 442
Query: 187 TYNALIYGFCIVGQLKQAIGLL 208
+YN LI G C G + A LL
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLL 464
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P + + ++ L + A + R+M I PS++T + LIN +C G+
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF +L + KR +P TF L++GLC G ++A+ +L G + VSY
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+GLC+ G + A + L + I P+ + + II++ CK A M+ KG
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
IS + VT LI G C VG+ + A+ +L+
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILE 535
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
++ +L SL K A R+ME G ++ ++N C G T +A ++ IL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ-GFRLNQVSYGTLINGLCKMGET 131
K GF + T+L+ G C N+ AL+ DV+ + N VSY LI+GLC++G
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
A Q+ + P+ Y +I +LC L+ A NL+ EMI +G PNV TY L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 192 IYGFCIVGQLKQAIGL 207
I G C G++++A G+
Sbjct: 343 IDGLCRDGKIEEANGV 358
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML ++P I+ +N ++ L + H +TA L M I P +T + +IN C G+
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDV--------------- 105
A + L +L++G +T TTLI G+C G AL +
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 106 ---VLAQGFRLNQ-----------------VSYGTLINGLCKMGETSAALEFLRQIEGQL 145
+L++G ++ + V+Y TL++GL + G+ + + L ++
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+PNV Y II+ LC+ V A L S M G+SPN VTY ++ G+ G+L +A+
Sbjct: 612 CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 35/243 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P + FN+++ L + A+ L ++M G++P +V+ ++LI+ C G
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A+ +L+++ +P +TFT +I C +G A F ++L +G L++V+ T
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 121 LINGLCKMGETSAALEFLR-------------------------QIEGQL---------- 145
LI+G+CK+G+T AL L +++ +L
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
++P+VV Y T++D L + ++ + + M + G PNV Y +I G C G++++A
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 206 GLL 208
LL
Sbjct: 637 KLL 639
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + ++ +L A +L +M G P++ T ++LI+ C G+ A V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++K P+ IT+ LI G C G V A + V+ + + N ++ L+ GLC+
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+G+ A+ L+++ + P++V YN +ID LC++ ++ A L S M I P+ +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 188 YNALIYGFCIVGQLKQAIGLL 208
+ A+I FC G+ A L
Sbjct: 479 FTAIINAFCKQGKADVASAFL 499
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 35/225 (15%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P + F ++ + K A + M GI+ VT + LI+ C +G+T A
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 66 -----------------------------------SVLANILKRGFQPTTITFTTLIKGL 90
++L I K G P+ +T+TTL+ GL
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 91 CLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
G++ + + +++ G N Y +INGLC+ G A + L ++ + PN
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
V Y ++ + + A M+ +G N Y++L+ GF
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 65/123 (52%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
++ + P ++ + ++ L+++ + + + M+++G P++ +I+IN C G+
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVE 633
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A +L+ + G P +T+T ++KG G + RAL+ ++ +G+ LN Y +L+
Sbjct: 634 EAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Query: 123 NGL 125
G
Sbjct: 694 QGF 696
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
GF I + T++ LC G A F +L GF L+ +L+ G C+ A
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDA 249
Query: 135 LEFLRQIEGQLI-IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
L+ + ++ PN V Y+ +I LC+ + A L +M KG P+ TY LI
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 194 GFCIVGQLKQAIGLLDE 210
C G + +A L DE
Sbjct: 310 ALCDRGLIDKAFNLFDE 326
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+++MRI N +L L K +++ ++ G+ PS+VT + L++ G
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T +F +L + G P +T +I GLC G V A + + G N V+Y
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 121 LINGLCKMGETSAALEFLRQI 141
++ G G+ ALE +R +
Sbjct: 657 MVKGYVNNGKLDRALETVRAM 677
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 1/210 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+L+ + P + N ++ L + A+ L+ M G+ P VT +IL LG
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQ-VSYG 119
+ A+ V+ ++L +G P IT+T L+ G C GN+ L +L++GF LN +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+++GLCK G AL Q++ + P++V Y+ +I LCK A LY EM K
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
I PN T+ AL+ G C G L +A LLD
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQ-PTTITFTT 85
S A + R M G++P ++T +IL+ C LG +L ++L RGF+ + I +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
++ GLC G + AL + + A G + V+Y +I+GLCK+G+ AL ++ +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 146 IIPN-----------------------------------VVMYNTIIDSLCKDNLVSHAC 170
I+PN +V+YN +ID K + A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 171 NLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
L+ +I GI+P+V T+N+LIYG+C + +A +LD
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 36/234 (15%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
++ V+ L + + A+ R E I PS+V+ + +++ +C LG A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
K G P+ + LI GLCL G++ AL+ + G + V+Y L G +G S
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 133 AALEFLRQIEGQLIIPNVVMY------------------------------NTII----- 157
A E +R + + + P+V+ Y N+II
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 158 -DSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
LCK + A +L+++M G+SP++V Y+ +I+G C +G+ A+ L DE
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
II + +L+ L KT A+SL QM+ G++P LV SI+I+ C LG+ A +
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ + P + T L+ GLC +G + A D +++ G L+ V Y +I+G K G
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
ALE + + I P+V +N++I CK ++ A + + + G++P+VV+Y
Sbjct: 483 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 542
Query: 190 ALIYGFCIVGQLK 202
L+ + G K
Sbjct: 543 TLMDAYANCGNTK 555
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 14/218 (6%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
ITP + FN ++ KT++ + A + +++ G+ PS+V+ + L++ + G T S
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVH-------RALQFHDV------VLAQGFR 112
+ + G PT +T++ + KGLC RG H R F + ++G
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 113 LNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNL 172
+Q++Y T+I LC++ S A FL ++ + + + YN +IDSLC + A +
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 173 YSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + +S + Y LI C+ G + A+ L +
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQ 715
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M RI P +L L + A SL + +G T +V +I+I+ + G
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +++ G P+ TF +LI G C N+ A + DV+ G + VSY T
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNL-------- 172
L++ G T + E R+++ + I P V Y+ I LC+ CN
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR-GWKHENCNHVLRERIFE 602
Query: 173 -----YSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+M +GI P+ +TYN +I C V L A L+
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%)
Query: 47 TLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVV 106
T S +++ C + A L + P+ ++F +++ G C G V A F V
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 107 LAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLV 166
L G + S+ LINGLC +G + ALE + + P+ V YN + ++
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 167 SHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
S A + +M+ KG+SP+V+TY L+ G C +G + + LL +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 352
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 59/97 (60%)
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
N+ +Y T+++GLC+ + A+ FLR E + I P+VV +N+I+ CK V A + +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++ G+ P+V ++N LI G C+VG + +A+ L +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 282
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ + ++ + + + L R+M+ GI P+ VT S++ C + +
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 66 SVLA------------NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
VL ++ G P IT+ T+I+ LC ++ A F +++ ++
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDA 653
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
+ +Y LI+ LC G A F+ ++ Q + + Y T+I + C A L+
Sbjct: 654 SSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLF 713
Query: 174 SEMIVKGISPNVVTYNALIYGFC 196
+++ +G + ++ Y+A+I C
Sbjct: 714 HQLLHRGFNVSIRDYSAVINRLC 736
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P I +N ++ L + KH S A M+ + S T +ILI+ C G A
Sbjct: 616 IPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 675
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
S + ++ ++ + +TTLIK C++G+ A++ +L +GF ++ Y +IN L
Sbjct: 676 SFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Query: 126 CK 127
C+
Sbjct: 736 CR 737
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P +N ++ L A L R++ GI VT +ILIN +C G
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF++ ++ G QPT T+T+LI LC + A + + V+ +G + + V T
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++G C +G A L++++ I P+ V YN ++ LC + A L EM +G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I P+ ++YN LI G+ G K A + DE
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ + P + +N ++ A + +M G+ P+ T + LI+ +
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 377
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A ++ I ++G ++T+ LI G C G+ +A HD ++ G + Q +Y +
Sbjct: 378 IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTS 437
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI LC+ +T A E ++ G+ + P++VM NT++D C + A +L EM +
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I+P+ VTYN L+ G C G+ ++A L+ E
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGE 527
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 3/203 (1%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N +L+ + S + R+M+ G+ P V+ +ILI G AF+
Sbjct: 293 PDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++K+G PT T+ TLI GL + + A + +G L+ V+Y LING C+
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ A ++ I P Y ++I LC+ N A L+ +++ KG+ P++V
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
N L+ G C +G + +A LL E
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKE 492
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +M I + FN ++ L K A ME+ GI P++VT + L+ G+
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +++ + +GFQP T+ ++ +C G L+ + G + VSY
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSYNI 332
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G G+ A + ++ Q ++P YNT+I L +N + A L E+ KG
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I + VTYN LI G+C G K+A L DE
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDE 422
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ I P + ++ L + A L ++ G+ P LV ++ L++ HC +G
Sbjct: 423 MMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AFS+L + P +T+ L++GLC G A + + +G + + +SY T
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G K G+T A ++ P ++ YN ++ L K+ A L EM +G
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Query: 181 ISPNVVTYNALI 192
I PN ++ ++I
Sbjct: 603 IVPNDSSFCSVI 614
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 80/155 (51%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ N ++ + A SL ++M++ I P VT + L+ C G+ A
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++ + +RG +P I++ TLI G +G+ A D +L+ GF ++Y L+ GL
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
K E A E LR+++ + I+PN + ++I+++
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%)
Query: 42 TPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ 101
T S + +L+ C C L A + ++GF P T T ++ L + A
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 102 FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
F+ + + N ++ +IN LCK G+ A FL +E I P +V YNT++
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 162 KDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ A + SEM KG P++ TYN ++ C G+ + + + E
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKE 320
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 36 MEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGN 95
M+ G P T + ++ L + +A+ A++ + + TF +I LC G
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 96 VHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNT 155
+ +A F ++ G + V+Y TL+ G G A + +++ + P++ YN
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 156 IIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I+ +C + A + EM G+ P+ V+YN LI G G L+ A DE
Sbjct: 301 ILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M M I P + +N ++ L + A L +M+ GI P ++ + LI+ + G
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T AF V +L GF PT +T+ L+KGL A + + ++G N S+ +
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCS 612
Query: 121 LINGLCKM 128
+I + +
Sbjct: 613 VIEAMSNL 620
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 1/210 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+L+ + P + N ++ L + A+ L+ M G+ P VT +IL LG
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQ-VSYG 119
+ A+ V+ ++L +G P IT+T L+ G C GN+ L +L++GF LN +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+++GLCK G AL Q++ + P++V Y+ +I LCK A LY EM K
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
I PN T+ AL+ G C G L +A LLD
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQ-PTTITFTT 85
S A + R M G++P ++T +IL+ C LG +L ++L RGF+ + I +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
++ GLC G + AL + + A G + V+Y +I+GLCK+G+ AL ++ +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 146 IIPN-----------------------------------VVMYNTIIDSLCKDNLVSHAC 170
I+PN +V+YN +ID K + A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 171 NLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
L+ +I GI+P+V T+N+LIYG+C + +A +LD
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 36/234 (15%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
++ V+ L + + A+ R E I PS+V+ + +++ +C LG A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
K G P+ + LI GLCL G++ AL+ + G + V+Y L G +G S
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 133 AALEFLRQIEGQLIIPNVVMY------------------------------NTII----- 157
A E +R + + + P+V+ Y N+II
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 158 -DSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
LCK + A +L+++M G+SP++V Y+ +I+G C +G+ A+ L DE
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
II + +L+ L KT A+SL QM+ G++P LV SI+I+ C LG+ A +
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ + P + T L+ GLC +G + A D +++ G L+ V Y +I+G K G
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
ALE + + I P+V +N++I CK ++ A + + + G++P+VV+Y
Sbjct: 483 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 542
Query: 190 ALIYGFCIVGQLK 202
L+ + G K
Sbjct: 543 TLMDAYANCGNTK 555
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 14/223 (6%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+++ ITP + FN ++ KT++ + A + +++ G+ PS+V+ + L++ + G
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVH-------RALQFHDV------VL 107
T S + + G PT +T++ + KGLC RG H R F +
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 108 AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVS 167
++G +Q++Y T+I LC++ S A FL ++ + + + YN +IDSLC +
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 168 HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
A + + + +S + Y LI C+ G + A+ L +
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQ 715
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M RI P +L L + A SL + +G T +V +I+I+ + G
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +++ G P+ TF +LI G C N+ A + DV+ G + VSY T
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNL-------- 172
L++ G T + E R+++ + I P V Y+ I LC+ CN
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR-GWKHENCNHVLRERIFE 602
Query: 173 -----YSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+M +GI P+ +TYN +I C V L A L+
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%)
Query: 47 TLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVV 106
T S +++ C + A L + P+ ++F +++ G C G V A F V
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 107 LAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLV 166
L G + S+ LINGLC +G + ALE + + P+ V YN + ++
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 167 SHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
S A + +M+ KG+SP+V+TY L+ G C +G + + LL +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 352
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 58/94 (61%)
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
N+ +Y T+++GLC+ + A+ FLR E + I P+VV +N+I+ CK V A + +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGL 207
++ G+ P+V ++N LI G C+VG + +A+ L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ + ++ + + + L R+M+ GI P+ VT S++ C + +
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 66 SVLA------------NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
VL ++ G P IT+ T+I+ LC ++ A F +++ ++
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDA 653
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
+ +Y LI+ LC G A F+ ++ Q + + Y T+I + C A L+
Sbjct: 654 SSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLF 713
Query: 174 SEMIVKGISPNVVTYNALIYGFC 196
+++ +G + ++ Y+A+I C
Sbjct: 714 HQLLHRGFNVSIRDYSAVINRLC 736
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P I +N ++ L + KH S A M+ + S T +ILI+ C G A
Sbjct: 616 IPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 675
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
S + ++ ++ + +TTLIK C++G+ A++ +L +GF ++ Y +IN L
Sbjct: 676 SFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Query: 126 CK 127
C+
Sbjct: 736 CR 737
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHY-STAISLSRQMEITGITPSLVTLSILINCHCYLG 59
ML+ TP N++L LV + Y A L + + G+ P+ + ++L+ C
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND 204
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A+ + +L+R P ++ LI+G C +G V+ A++ D +L +GF +++SY
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYT 264
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
TL+N LC+ + A + L +++ + P++V YNT+I C+++ A + +M+
Sbjct: 265 TLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSN 324
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G SPN V+Y LI G C G + L+E
Sbjct: 325 GCSPNSVSYRTLIGGLCDQGMFDEGKKYLEE 355
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P +N ++ + S A L +M + P + + ILI C GQ A
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L ++L +GF P +++TTL+ LC + + A + + +G + V Y T+I G
Sbjct: 246 ELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGF 305
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ A + L + PN V Y T+I LC + EMI KG SP+
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 365
Query: 186 VTYNALIYGFCIVGQLKQAIGLLD 209
N L+ GFC G++++A +++
Sbjct: 366 SVSNCLVKGFCSFGKVEEACDVVE 389
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ + P + + ++ + + A+ L M G P ++ + L+N C Q
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ +L + +G P + + T+I G C A + D +L+ G N VSY T
Sbjct: 276 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI GLC G ++L ++ + P+ + N ++ C V AC++ ++ G
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Query: 181 ISPNVVTYNALIYGFC 196
+ + T+ +I C
Sbjct: 396 ETLHSDTWEMVIPLIC 411
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 53/134 (39%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
P ++ +N ++ + A + M G +P+ V+ LI C G
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKK 351
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
L ++ +GF P L+KG C G V A +VV+ G L+ ++ +I +C
Sbjct: 352 YLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Query: 127 KMGETSAALEFLRQ 140
E+ FL
Sbjct: 412 NEDESEKIKLFLED 425
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 113 bits (283), Expect = 8e-26, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 102/209 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + +N V+ + K A+ L+ +M+ +G + SLVT ILI+ C G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A L + G + + +T+LI+G C G + R D VL +G ++Y T
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G CK+G+ A E + + + PNV Y +ID LC A L + MI K
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
PN VTYN +I C G + A+ +++
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Score = 110 bits (274), Expect = 9e-25, Method: Composition-based stats.
Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 35/226 (15%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N ++ LV+++++ A S R+M T + V+LS L+ C+ + +T AF VLA +LK
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 74 RGF-----------------------------------QPTTITFTTLIKGLCLRGNVHR 98
RGF P ++ T+I+G C + +
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 99 ALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIID 158
AL+ + + G + V++G LI+ CK G+ A+ FL++++ + ++V+Y ++I
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
C + L+ E++ +G SP +TYN LI GFC +GQLK+A
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Score = 103 bits (256), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
G +P +T + LI C LGQ A + +++RG +P T+T LI GLC G A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 100 LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDS 159
LQ ++++ + N V+Y +IN LCK G + A+E + ++ + P+ + YN ++
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 160 LCKDNLVSHACNLYSEMIVKG--ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
LC + A L M+ P+V++YNALI+G C +L QA+ + D
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Score = 97.4 bits (241), Expect = 6e-21, Method: Composition-based stats.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 2/212 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ P + +N ++ L K + A+ + M+ P +T +IL+ C G
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 61 TTSAFSVLANILKRG--FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
A +L +LK P I++ LI GLC +H+AL +D+++ + ++V+
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
L+N K G+ + A+E +QI I+ N Y +ID CK +++ A L +M V
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+V YN L+ C G L QA L +E
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Score = 92.4 bits (228), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 93/209 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ + N +L L + A+SL R+M + P + + + +I C +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + G + +T+ LI C G + A+ F + G + V Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G C GE ++ + P + YNT+I CK + A ++ MI +G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ PNV TY LI G C VG+ K+A+ LL+
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Score = 86.3 bits (212), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 37/239 (15%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+P I +N ++ K A + M G+ P++ T + LI+ C +G+T A
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+L ++++ +P +T+ +I LC G V A++ +++ + R + ++Y L+ GLC
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 127 KMGETSAA--LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK----- 179
G+ A L +L + P+V+ YN +I LCK+N + A ++Y ++ K
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 180 ------------------------------GISPNVVTYNALIYGFCIVGQLKQAIGLL 208
I N TY A+I GFC G L A GLL
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 86/203 (42%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I +N ++ L K A+ + + VT +IL+N G A +
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
I + T+T +I G C G ++ A + + + Y L++ LCK
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A +++ P+VV +N +ID K + A +L M G+SP++ T
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y+ LI F +G L +AI D+
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDK 624
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 1 MLQMRIT---PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCY 57
+ +MR++ P + ++N +L+SL K A L +M+ P +V+ +I+I+
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 58 LGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS 117
G SA S+L + + G P T++ LI G + A+ F D ++ GF +
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDN 164
+++ GET E ++++ + I+ + + T++D +C +
Sbjct: 637 CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683
Score = 58.2 bits (139), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N +L S +K + A+ L +Q+ + I + T + +I+ C G A +L +
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
QP+ + L+ LC G++ +A + + + + VS+ +I+G K G+ +
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A L + + P++ Y+ +I+ K + A + + +M+ G P+ ++++
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL- 641
Query: 194 GFCI 197
+CI
Sbjct: 642 KYCI 645
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 2/212 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + RI ++ +N +L K TA + M I P+ ++ SIL+N C G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF V ++ + +PT + ++IKG C GN F + ++++GF + +SY T
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 121 LINGLCKMGETSAALEFLRQIEGQL--IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
LI G + S A ++++E + ++P+V YN+I+ C+ N + A + +MI
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+G++P+ TY +I GF L +A + DE
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
MLQ ++ +N +L L K K A L +M + P TL+ILI+ HC LG
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + + ++ + +T+ TL+ G G++ A + ++++ +SY
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+N LC G + A ++ + I P V++ N++I C+ S + +MI +G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ ++YN LIYGF + +A GL+ +
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+P + +N V+ L K Y A + +M +G++P T L+ C G
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V +++ R P + F++++ GN+ +AL + + V G + V Y LI G
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ G S A+ ++ Q +VV YNTI+ LCK ++ A L++EM + + P+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
T LI G C +G L+ A+ L +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQK 505
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
S A++L +M G +VT + +++ C A + + +R P + T T L
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
I G C GN+ A++ + + RL+ V+Y TL++G K+G+ A E + + I
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIG 206
+P + Y+ ++++LC ++ A ++ EMI K I P V+ N++I G+C G
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 207 LLDE 210
L++
Sbjct: 607 FLEK 610
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 35/232 (15%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N ++ +L K + Q++ G+ P +VT + LI+ + G AF ++ +
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET-- 131
+GF P T+ T+I GLC G RA + +L G + +Y +L+ CK G+
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 132 ---------------------------------SAALEFLRQIEGQLIIPNVVMYNTIID 158
AL + ++ +IP+ V+Y +I
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
C+ ++S A NL +EM+ +G + +VVTYN +++G C L +A L +E
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 99/192 (51%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N ++ SLV+ A + +++ +G+ ++ TL+I++N C G+ + L+ + +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
+G P +T+ TLI +G + A + + + +GF +Y T+INGLCK G+
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A E ++ + P+ Y +++ CK V ++S+M + + P++V +++++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 194 GFCIVGQLKQAI 205
F G L +A+
Sbjct: 384 LFTRSGNLDKAL 395
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ ++P + +L K + M + P LV S +++ G
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ + G P + +T LI+G C +G + A+ + +L QG ++ V+Y T
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+++GLCK A + ++ + + P+ +ID CK + +A L+ +M K
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
I +VVTYN L+ GF VG + A
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTA 534
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
F+ ++ + V+ + A + G T S+ + LI +G A+ V I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G T ++ LC G + + F V +G + V+Y TLI+ G
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A E + + G+ P V YNT+I+ LCK A +++EM+ G+SP+ TY +L+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 193 YGFCIVGQL 201
C G +
Sbjct: 348 MEACKKGDV 356
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 58 LGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS 117
L + AF++L + +GF + LI L G V A + + G +N +
Sbjct: 181 LREAHEAFTLLRS---KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYT 237
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
++N LCK G+ FL Q++ + + P++V YNT+I + L+ A L + M
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
KG SP V TYN +I G C G+ ++A + E
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT--GITPSLVTLSILINCHCYL 58
M+ P I +N ++ V+ ++ S A L ++ME G+ P + T + +++ C
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGF 111
Q A VL +++RG P T+T +I G + N+ A + HD +L +GF
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%)
Query: 83 FTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIE 142
F LI+ + A + ++ ++GF ++ + LI L ++G A ++I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 143 GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLK 202
+ NV N ++++LCKD + S++ KG+ P++VTYN LI + G ++
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 203 QAIGLLD 209
+A L++
Sbjct: 288 EAFELMN 294
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 113 bits (282), Expect = 1e-25, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 102/210 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + R+ P N +L K + M G P++ T +I+I+C C G
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + + RG P T+T+ ++I G G + + F + + + ++Y
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LIN CK G+ LEF R+++G + PNVV Y+T++D+ CK+ ++ A Y +M G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ PN TY +LI C +G L A L +E
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Score = 107 bits (268), Expect = 5e-24, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 102/210 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M M P +I +N ++ K + R+M+ G+ P++V+ S L++ C G
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ + G P T+T+LI C GN+ A + + +L G N V+Y
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+GLC A E +++ +IPN+ YN +I K + A L +E+ +G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I P+++ Y I+G C + +++ A +++E
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Score = 94.0 bits (232), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 98/205 (47%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ ++ ++ + K AI M G+ P+ T + LI+ +C +G + AF
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ +L+ G + +T+T LI GLC + A + + G N SY LI+G
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
K ALE L +++G+ I P++++Y T I LC + A + +EM GI N
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
+ Y L+ + G + + LLDE
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDE 567
Score = 90.9 bits (224), Expect = 6e-19, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 94/193 (48%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
F+ + + L+ AI +M+ + P + + L++ LG+T +++
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
G +PT T+ +I +C G+V A + + +G + V+Y ++I+G K+G
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
+ F +++ P+V+ YN +I+ CK + Y EM G+ PNVV+Y+ L+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 193 YGFCIVGQLKQAI 205
FC G ++QAI
Sbjct: 375 DAFCKEGMMQQAI 387
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
MLQ+ + ++ + ++ L + A L +M+ G+ P+L + + LI+
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L + RG +P + + T I GLC + A + + G + N + Y T
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK- 179
L++ K G + L L +++ I VV + +ID LCK+ LVS A + ++ +
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G+ N + A+I G C Q++ A L ++
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 638
Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P ++ + + L + A + +M+ GI + + + L++ + G T
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ-GFRLNQVSYGTLING 124
+L + + + T +TF LI GLC V +A+ + + + G + N + +I+G
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
LCK + AA Q+ + ++P+ Y +++D K V A L +M G+ +
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
++ Y +L++G QL++A L+E
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEE 708
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHC---YLGQTTSAFSVLA 69
+ ++ + K+ + + + L +M+ I ++VT +LI+ C + + F+ ++
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
N G Q FT +I GLC V A + ++ +G ++ +Y +L++G K G
Sbjct: 605 NDF--GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
AL ++ + +++ Y +++ L N + A + EMI +GI P+ V
Sbjct: 663 NVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 722
Query: 190 ALIYGFCIVGQLKQAIGL 207
+++ +G + +A+ L
Sbjct: 723 SVLKKHYELGCIDEAVEL 740
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
MR+ P + FN ++ + + A + +M + PS+VT + LI C
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A S+L +++K+ +P +TF L+KGLC +G + A + + +G + V+YG L+
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 298
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+ L K G A L +++ + I P+VV+YN +++ LC + V A + +EM +KG
Sbjct: 299 SDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCK 358
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLD 209
PN TY +I GFC + + +L+
Sbjct: 359 PNAATYRMMIDGFCRIEDFDSGLNVLN 385
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+M + P ++ +N ++ L + A SL M I P+ VT +L+ C G+
Sbjct: 212 MLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGE 271
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ ++ RG +P + + L+ L RG + A + + + + V Y
Sbjct: 272 YNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNI 331
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+N LC A L +++ + PN Y +ID C+ N+ + M+
Sbjct: 332 LVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASR 391
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
P T+ ++ G G L A +L+
Sbjct: 392 HCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
++ ++ L K++++ + R + + LI + G A V I
Sbjct: 84 YSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKIT 143
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
T + TLI L G + +A F D R N VS+ LI G +
Sbjct: 144 SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWE 203
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
AA + ++ + P+VV YN++I LC+++ + A +L +MI K I PN VT+ L+
Sbjct: 204 AACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLM 263
Query: 193 YGFCIVGQLKQAIGLL 208
G C G+ +A L+
Sbjct: 264 KGLCCKGEYNEAKKLM 279
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ RI P + F ++ L Y+ A L ME G P LV IL++ G+
Sbjct: 247 MIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGR 306
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L + KR +P + + L+ LC V A + + +G + N +Y
Sbjct: 307 IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRM 366
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G C++ + + L L + P + ++ L K + HAC + M K
Sbjct: 367 MIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKN 426
Query: 181 ISPNVVTYNALIYGFCI 197
+S + L+ CI
Sbjct: 427 LSFGSGAWQNLLSDLCI 443
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 6/193 (3%)
Query: 24 KHYSTAISLSRQMEI-TGITP-----SLVTLSILINCHCYLGQTTSAFSVLANILKRGFQ 77
+HY A S+ + +++ IT ++ +L+ LIN G+ A S +
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 78 PTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEF 137
P +++F LIKG + + A + D +L + + V+Y +LI LC+ + A
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 138 LRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCI 197
L + + I PN V + ++ LC + A L +M +G P +V Y L+
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 198 VGQLKQAIGLLDE 210
G++ +A LL E
Sbjct: 304 RGRIDEAKLLLGE 316
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 112 bits (280), Expect = 2e-25, Method: Composition-based stats.
Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 1/198 (0%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
NK+ K A S + ME GI P++V + ++ HC + A S+ + +L+
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
+G +P T++ LI G + A + + A F N+V Y T+INGLCK+G+TS
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 134 ALEFLRQ-IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A E L+ I+ + + YN+IID K A Y EM G SPNVVT+ +LI
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 193 YGFCIVGQLKQAIGLLDE 210
GFC ++ A+ + E
Sbjct: 633 NGFCKSNRMDLALEMTHE 650
Score = 98.2 bits (243), Expect = 4e-21, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ + P ++ ++ K K A + QM + + V + +IN C +GQ
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 61 TTSAFSVLANILK-RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
T+ A +L N++K + + + ++ ++I G G+ A++ + + G N V++
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+LING CK ALE +++ + ++ Y +ID CK N + A L+SE+
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGL 207
G+ PNV YN+LI GF +G++ AI L
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 96/204 (47%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+P ++ F ++ K+ A+ ++ +M+ + L LI+ C +A++
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYT 681
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ + + + G P + +LI G G + A+ + ++ G + +Y T+I+GL
Sbjct: 682 LFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K G + A + ++ I+P+ +++ +++ L K A + EM K ++PNV+
Sbjct: 742 KDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL 801
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
Y+ +I G G L +A L DE
Sbjct: 802 LYSTVIAGHHREGNLNEAFRLHDE 825
Score = 81.3 bits (199), Expect = 5e-16, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 98/194 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M M + + + ++ K TA +L ++ G+ P++ + LI+ LG+
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + ++ G T+TT+I GL GN++ A + +L G +++ +
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+NGL K G+ A + L +++ + + PNV++Y+T+I ++ ++ A L+ EM+ KG
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 181 ISPNVVTYNALIYG 194
I + +N L+ G
Sbjct: 831 IVHDDTVFNLLVSG 844
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ ++ P + N VL+SLV++ A + +M + G+ VT +L+ +
Sbjct: 195 MVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERK 254
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLC-----------LR---------------- 93
A + ++ RG +P + F+ ++ C LR
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT 314
Query: 94 ---------GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQ 144
GN+ A++ D ++ G ++ ++ +L+NG CK E AL+ ++E +
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 145 LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
+ P+ VM++ +++ CK+ + A Y M I+P+ V + +I G C+ + +A
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESPEA 433
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 1/198 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ V+ + VK + A+ + +M GI S++ + L+N +C + A + +
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G P + F+ +++ C + +A++F+ + + + V T+I G K
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
AALE + I + M N I CK V A + M KGI PNVV YN ++
Sbjct: 433 AALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
Query: 193 YGFCIVGQLKQAIGLLDE 210
C + + A + E
Sbjct: 492 LAHCRMKNMDLARSIFSE 509
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 109/203 (53%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + N ++SL+ A+ R+M I+P+ TL+++++ +C G+ +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L ++ + GF+ T +++ TLI G C +G + AL+ +++ G + N V++ TLI+G C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ A + +++ + PN V YNT+I+ + A Y +M+ GI +++T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YNALI+G C + ++A + E
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKE 403
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
S+A+ L M +G+ P++VT + LI+ C + A V + P T+T+ TL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
I G +G+ A +F++ ++ G + + ++Y LI GLCK +T A +F+++++ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIG 206
+PN ++ +I C LY MI G PN T+N L+ FC A
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 207 LLDE 210
+L E
Sbjct: 470 VLRE 473
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +I+P N V++ ++ I L + ME G + V+ + LI HC G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+SA + + K G QP +TF TLI G C + A + + A N V+Y T
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING + G+ A F + I +++ YN +I LCK A E+ +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 181 ISPNVVTYNALIYGFCI 197
+ PN T++ALI G C+
Sbjct: 409 LVPNSSTFSALIMGQCV 425
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 4/200 (2%)
Query: 15 KVLTSLVKT----KHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+V SL KT K + A QM+ G P++ + + ++ G+ A
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ + P T ++ G C G + + ++ + GFR VSY TLI G C+ G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
S+AL+ + + PNVV +NT+I C+ + A ++ EM ++PN VTYN
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
LI G+ G + A ++
Sbjct: 349 LINGYSQQGDHEMAFRFYED 368
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ FN ++ + A + +M+ + P+ VT + LIN + G AF
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAF 363
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+++ G Q +T+ LI GLC + +A QF + + N ++ LI G
Sbjct: 364 RFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C E + + PN +N ++ + C++ A + EM+ + I +
Sbjct: 424 CVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDS 483
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
T + + G G+ + LL E
Sbjct: 484 RTVHQVCNGLKHQGKDQLVKKLLQE 508
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + +N ++ + + A M GI ++T + LI C +
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A + + K P + TF+ LI G C+R N R + + ++ G N+ ++
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 121 LINGLCKMGETSAALEFLRQI 141
L++ C+ + A + LR++
Sbjct: 454 LVSAFCRNEDFDGASQVLREM 474
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 109/203 (53%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + N ++SL+ A+ R+M I+P+ TL+++++ +C G+ +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L ++ + GF+ T +++ TLI G C +G + AL+ +++ G + N V++ TLI+G C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ A + +++ + PN V YNT+I+ + A Y +M+ GI +++T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YNALI+G C + ++A + E
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKE 403
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
S+A+ L M +G+ P++VT + LI+ C + A V + P T+T+ TL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
I G +G+ A +F++ ++ G + + ++Y LI GLCK +T A +F+++++ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIG 206
+PN ++ +I C LY MI G PN T+N L+ FC A
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 207 LLDE 210
+L E
Sbjct: 470 VLRE 473
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +I+P N V++ ++ I L + ME G + V+ + LI HC G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+SA + + K G QP +TF TLI G C + A + + A N V+Y T
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING + G+ A F + I +++ YN +I LCK A E+ +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 181 ISPNVVTYNALIYGFCI 197
+ PN T++ALI G C+
Sbjct: 409 LVPNSSTFSALIMGQCV 425
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 4/200 (2%)
Query: 15 KVLTSLVKT----KHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+V SL KT K + A QM+ G P++ + + ++ G+ A
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ + P T ++ G C G + + ++ + GFR VSY TLI G C+ G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
S+AL+ + + PNVV +NT+I C+ + A ++ EM ++PN VTYN
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
LI G+ G + A ++
Sbjct: 349 LINGYSQQGDHEMAFRFYED 368
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ FN ++ + A + +M+ + P+ VT + LIN + G AF
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAF 363
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+++ G Q +T+ LI GLC + +A QF + + N ++ LI G
Sbjct: 364 RFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C E + + PN +N ++ + C++ A + EM+ + I +
Sbjct: 424 CVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDS 483
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
T + + G G+ + LL E
Sbjct: 484 RTVHQVCNGLKHQGKDQLVKKLLQE 508
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + +N ++ + + A M GI ++T + LI C +
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A + + K P + TF+ LI G C+R N R + + ++ G N+ ++
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 121 LINGLCKMGETSAALEFLRQI 141
L++ C+ + A + LR++
Sbjct: 454 LVSAFCRNEDFDGASQVLREM 474
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+P ++ + +++ K A SL M GI P+ VT ++L++ + G+ +A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ ++ G P +TFT+LI G C G V + + + + A+G N +Y LIN LC
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
A E L Q+ + IIP MYN +ID CK V+ A + EM K P+ +
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 187 TYNALIYGFCIVGQLKQAIGLL 208
T+ LI G C+ G++ +A+ +
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIF 475
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 109/204 (53%), Gaps = 1/204 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGI-TPSLVTLSILINCHCYLGQTTSAFS 66
P I+ +N ++ K+ + A + + ++ + +P +VT + +I+ +C G+ A S
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+L ++L+ G PT +TF L+ G G + A + +++ G + V++ +LI+G C
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
++G+ S ++ + + PN Y+ +I++LC +N + A L ++ K I P
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
YN +I GFC G++ +A +++E
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEE 442
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML++ I P + FN ++ K TA + +M G P +VT + LI+ +C +GQ
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ F + + RG P T++ LI LC + +A + + ++ Y
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G CK G+ + A + ++E + P+ + + +I C + A +++ +M+ G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGL 207
SP+ +T ++L+ G K+A L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 3/210 (1%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
++ I +N + SL K + A + M+ G++P+ L L++ G+
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A ++L + + + +L+ L V A++ D L + ++ L
Sbjct: 155 HFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I GLC +G+ ALE L + G P++V YNT+I CK N ++ A ++ ++ +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 182 -SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
SP+VVTY ++I G+C G++++A LLD+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDD 302
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+P ++ + +++ K A SL M GI P+ VT ++L++ + G+ +A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ ++ G P +TFT+LI G C G V + + + + A+G N +Y LIN LC
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
A E L Q+ + IIP MYN +ID CK V+ A + EM K P+ +
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 187 TYNALIYGFCIVGQLKQAIGLL 208
T+ LI G C+ G++ +A+ +
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIF 475
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 109/204 (53%), Gaps = 1/204 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGI-TPSLVTLSILINCHCYLGQTTSAFS 66
P I+ +N ++ K+ + A + + ++ + +P +VT + +I+ +C G+ A S
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+L ++L+ G PT +TF L+ G G + A + +++ G + V++ +LI+G C
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
++G+ S ++ + + PN Y+ +I++LC +N + A L ++ K I P
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
YN +I GFC G++ +A +++E
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEE 442
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML++ I P + FN ++ K TA + +M G P +VT + LI+ +C +GQ
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ F + + RG P T++ LI LC + +A + + ++ Y
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G CK G+ + A + ++E + P+ + + +I C + A +++ +M+ G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGL 207
SP+ +T ++L+ G K+A L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 3/210 (1%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
++ I +N + SL K + A + M+ G++P+ L L++ G+
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A ++L + + + +L+ L V A++ D L + ++ L
Sbjct: 155 HFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I GLC +G+ ALE L + G P++V YNT+I CK N ++ A ++ ++ +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 182 -SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
SP+VVTY ++I G+C G++++A LLD+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDD 302
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 111 bits (277), Expect = 4e-25, Method: Composition-based stats.
Identities = 63/202 (31%), Positives = 102/202 (50%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I +N ++ L K + A +M G+ P T + LI +C G A +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ + + GF P T+ +LI GLC G +RAL + L +G + N + Y TLI GL
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A + ++ + +IP V +N +++ LCK VS A L MI KG P++ T
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 188 YNALIYGFCIVGQLKQAIGLLD 209
+N LI+G+ +++ A+ +LD
Sbjct: 464 FNILIHGYSTQLKMENALEILD 485
Score = 108 bits (271), Expect = 2e-24, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 103/203 (50%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P +I +N ++ L A L+ +M G+ P + T +IL+N C +G + A
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++ ++ +G+ P TF LI G + + AL+ DV+L G + +Y +L+NGL
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK + +E + + + PN+ +N +++SLC+ + A L EM K ++P+
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 186 VTYNALIYGFCIVGQLKQAIGLL 208
VT+ LI GFC G L A L
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLF 589
Score = 108 bits (269), Expect = 3e-24, Method: Composition-based stats.
Identities = 64/203 (31%), Positives = 102/203 (50%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P + +N + L + A+ + + G P ++T + LI C + A
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
L ++ G +P + T+ TLI G C G V A + + GF +Q +Y +LI+GL
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C GET+ AL + G+ I PNV++YNT+I L ++ A L +EM KG+ P V
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 186 VTYNALIYGFCIVGQLKQAIGLL 208
T+N L+ G C +G + A GL+
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLV 449
Score = 98.6 bits (244), Expect = 3e-21, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 100/210 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML ++ + FNK+L L K L ++ G+ P+L T ++ I C G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ ++++G +P IT+ LI GLC A + ++ +G + +Y T
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G CK G A + +P+ Y ++ID LC + + A L++E + KG
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I PNV+ YN LI G G + +A L +E
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Score = 95.5 bits (236), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 98/201 (48%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ + V+ + + L +M +G++ L T + L+ C G +L
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
++KRG P T+ I+GLC RG + A++ ++ QG + + ++Y LI GLCK
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+ A +L ++ + + P+ YNT+I CK +V A + + + G P+ TY
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYR 360
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
+LI G C G+ +A+ L +E
Sbjct: 361 SLIDGLCHEGETNRALALFNE 381
Score = 94.0 bits (232), Expect = 6e-20, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P +N ++ K A + G P T LI+ C+ G+
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A ++ L +G +P I + TLIKGL +G + A Q + + +G ++
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 121 LINGLCKMGETS-----------------------------------AALEFLRQIEGQL 145
L+NGLCKMG S ALE L +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ P+V YN++++ LCK + Y M+ KG +PN+ T+N L+ C +L +A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 206 GLLDE 210
GLL+E
Sbjct: 552 GLLEE 556
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 1/209 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML + P + +N +L L KT + + + M G P+L T +IL+ C +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYG 119
A +L + + P +TF TLI G C G++ A F + A + +Y
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+I+ + + A + +++ + + P+ Y ++D CK V+ EM+
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLL 208
G P++ T +I C+ ++ +A G++
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGII 695
Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A+++ +M+ P++ + + +++ G A V + RG P +FT +K
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING------------------------ 124
C H AL+ + + +QG +N V+Y T++ G
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 125 -----------LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
LCK G+ + L ++ + ++PN+ YN I LC+ + A +
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
+I +G P+V+TYN LIYG C + ++A
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 68/152 (44%)
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
G+ A +V + +PT ++ ++ L G +A + + + +G + S+
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
+ CK AAL L + Q NVV Y T++ ++N + L+ +M+
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G+S + T+N L+ C G +K+ LLD+
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 241
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 1/198 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN +LT +V + ++ S + + + + + + ILI C G+ +F +L +
Sbjct: 132 FNYLLTFVVGSSSFNQWWSFFNENK-SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELT 190
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ GF P + +TTLI G C +G + +A + G N+ +Y LINGL K G
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK 250
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
E +++ + PN+ YN +++ LCKD A ++ EM +G+S N+VTYN LI
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 193 YGFCIVGQLKQAIGLLDE 210
G C +L +A ++D+
Sbjct: 311 GGLCREMKLNEANKVVDQ 328
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 108/208 (51%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + +N V+ L K A + +M G++ ++VT + LI C +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V+ + G P IT+ TLI G C G + +AL + ++G + V+Y
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++G C+ G+TS A + ++++E + I P+ V Y +ID+ + + + A L M G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ P+V TY+ LI+GFCI GQ+ +A L
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P +I +N ++ A+SL R ++ G++PSLVT +IL++ C G T+ A
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++ + +RG +P+ +T+T LI N+ +A+Q + G + +Y LI+G
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C G+ + A + + + PN V+YNT+I CK+ A L EM K ++PNV
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
+Y +I C + K+A L+++
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEK 538
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
++ L K + +M+ G+ P+L T + ++N C G+T AF V + +RG
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAAL 135
+T+ TLI GLC ++ A + D + + G N ++Y TLI+G C +G+ AL
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 136 EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
R ++ + + P++V YN ++ C+ S A + EM +GI P+ VTY LI F
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 196 CIVGQLKQAIGL 207
+++AI L
Sbjct: 419 ARSDNMEKAIQL 430
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 107/210 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + ++ I+ +N ++ L + + A + QM+ GI P+L+T + LI+ C +G+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S+ ++ RG P+ +T+ L+ G C +G+ A + + +G + ++V+Y
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ + A++ +E ++P+V Y+ +I C ++ A L+ M+ K
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN V YN +I G+C G +A+ LL E
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+ + +P ++ + ++ K A L +M G+ + T ++LIN G
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
F + + + G P T+ ++ LC G A Q D + +G N V+Y T
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI GLC+ + + A + + Q++ I PN++ YNT+ID C + A +L ++ +G
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+SP++VTYN L+ GFC G A ++ E
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P + + ++ + ++ + AI L ME G+ P + T S+LI+ C GQ
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +++++ +P + + T+I G C G+ +RAL+ + + N SY
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPN 149
+I LCK ++ A + ++ I P+
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPS 547
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
ITP I N ++ +L K +A + ++ G+ P+LVT + ++ + G SA
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
VL +L RG+ P T+T L+ G C G A D + N+V+YG +I L
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK ++ A ++ + +P+ + +ID+LC+D+ V AC L+ +M+ P+
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
+ LI+ C G++ +A L DE
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDE 391
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQ-MEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
N +L L++ + + ++ + E GITP++ T ++L+ C SA+ VL I
Sbjct: 159 NTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIP 218
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
G P +T+TT++ G RG++ A + + +L +G+ + +Y L++G CK+G S
Sbjct: 219 SMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS 278
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A + +E I PN V Y +I +LCK+ A N++ EM+ + P+ +I
Sbjct: 279 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVI 338
Query: 193 YGFCIVGQLKQAIGLL 208
C ++ +A GL
Sbjct: 339 DALCEDHKVDEACGLW 354
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 4 MRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTS 63
M + P ++ + +L V +A + +M G P T ++L++ +C LG+ +
Sbjct: 220 MGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSE 279
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
A +V+ ++ K +P +T+ +I+ LC A D +L + F + +I+
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
LC+ + A R++ +P+ + +T+I LCK+ V+ A L+ E KG P
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIP 398
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLLDE 210
+++TYN LI G C G+L +A L D+
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDD 425
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML P + ++ K +S A ++ ME I P+ VT ++I C +
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A ++ +L+R F P + +I LC V A +L + T
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ LCK G + A + + E + IP+++ YNT+I +C+ ++ A L+ +M +
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN TYN LI G G +K+ + +L+E
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEE 460
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 1/208 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P + + ++ +L K K A ++ +M P +I+ C +
Sbjct: 287 MEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +LK P +TLI LC G V A + D +G + ++Y T
Sbjct: 347 VDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNT 405
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G+C+ GE + A + + PN YN +I+ L K+ V + EM+ G
Sbjct: 406 LIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
PN T+ L G +G+ + A+ ++
Sbjct: 466 CFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 19/196 (9%)
Query: 25 HYSTAISLSRQMEITGITPSLVTLSILINC----------HCYLGQTTSAFSVLANILKR 74
Y +++ + ++ G+ S+ +L+ L+N H + +F
Sbjct: 135 RYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF--------- 185
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
G P T L+K LC + ++ A + D + + G N V+Y T++ G G+ +A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
L ++ + P+ Y ++D CK S A + +M I PN VTY +I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 195 FCIVGQLKQAIGLLDE 210
C + +A + DE
Sbjct: 306 LCKEKKSGEARNMFDE 321
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 15 KVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKR 74
KV+ +L + A L R+M P LS LI+ C G+ T A L + ++
Sbjct: 336 KVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA-RKLFDEFEK 394
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
G P+ +T+ TLI G+C +G + A + D + + + N +Y LI GL K G
Sbjct: 395 GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEG 454
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+ L ++ PN + + + L K A + S ++ G
Sbjct: 455 VRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 109 bits (273), Expect = 1e-24, Method: Composition-based stats.
Identities = 60/210 (28%), Positives = 103/210 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P + ++ ++ +++A ++M G+ P+ V + LIN +C G+
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S +++ +G T+T L+ GL V A + + +G + SYG
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LING K+G A ++ + + PNV++YN ++ C+ + A L EM VKG
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ PN VTY +I G+C G L +A L DE
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Score = 105 bits (263), Expect = 2e-23, Method: Composition-based stats.
Identities = 63/210 (30%), Positives = 105/210 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P I +N ++ L K K A S +M G+ P+ T I+ + +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
SA + + + G P + T LI C +G V A + ++ QG + +Y
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+NGL K + A E R++ G+ I P+V Y +I+ K + A +++ EM+ +G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++PNV+ YN L+ GFC G++++A LLDE
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Score = 98.6 bits (244), Expect = 3e-21, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +TP +I +N +L ++ A L +M + G+ P+ VT +I+ +C G
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF + + +G P + +TTL+ G C +V RA+ +G + +
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNA 771
Query: 121 LINGLCKMGETSAALEFL-RQIEG---QLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
LIN + K G+T E L R ++G + PN V YN +ID LCK+ + A L+ +M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P V+TY +L+ G+ +G+ + + DE
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Score = 95.5 bits (236), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ ++ L K A + R+M GI P + + +LIN LG A S+ ++
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G P I + L+ G C G + +A + D + +G N V+Y T+I+G CK G+ +
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A +++ + ++P+ +Y T++D C+ N V A ++ KG + + +NALI
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALI 773
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 82/176 (46%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A +L M +G+ P + LI +C + +L + KR + T+ T++K
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
G+C G++ A ++A G R N V Y TLI + A+ L++++ Q I P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
++ YN++I L K + A + EM+ G+ PN TY A I G+ + A
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ V+ + + A ++ ++M +G P++V + LI + A VL +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
++G P + +LI GL + A F ++ G + N +YG I+G + E +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI--------------- 177
+A ++++++ ++PN V+ +I+ CK V AC+ Y M+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 178 --------------------VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
KGI+P+V +Y LI GF +G +++A + DE
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 91/198 (45%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
++ ++ L+K ++ A L +M GI I G A ++ ++
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
G P + +LI+G C NV + + + + ++ +YGT++ G+C G+
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A ++++ PNVV+Y T+I + +++ A + EM +GI+P++ YN+LI
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 193 YGFCIVGQLKQAIGLLDE 210
G ++ +A L E
Sbjct: 495 IGLSKAKRMDEARSFLVE 512
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGF----QPTTITFTTLIKGLCLRGN 95
G S + LIN G+T VL ++ F +P +T+ +I LC GN
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 96 VHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNT 155
+ A + + ++Y +L+NG KMG + + I P+ +MY+
Sbjct: 821 LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSV 880
Query: 156 IIDSLCKDNLVSHACNLYSEMIVK-----GISPNVVTYNALIYGFCIVGQLKQA 204
II++ K+ + + A L +M K G ++ T AL+ GF VG+++ A
Sbjct: 881 IINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/182 (24%), Positives = 72/182 (39%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A+ L M G+ P T +LI+ C + + A S+L + G T++ LI
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
GL N A +++ G + Y I + K G A + +IP
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
Y ++I+ C++ V L EM + I + TY ++ G C G L A ++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 209 DE 210
E
Sbjct: 441 KE 442
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N ++ L K + A L QM+ + P+++T + L+N + +G+ F V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ-----GFRLNQVSYGTLI 122
+ G +P I ++ +I G +AL D + A+ G +L+ + L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHAC 170
+G K+GE A + ++ N+V I DS L++ +C
Sbjct: 923 SGFAKVGEMEVA---------EKVMENMVRLQYIPDSATVIELINESC 961
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN +L L K+K A L R + + VT ++++N C + +T A VL ++
Sbjct: 164 FNTILDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMV 222
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+RG P T+ T++KG G + A +F + + ++ V+Y T+++G GE
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A ++ + ++P+V YN +I LCK + V +A ++ EM+ +G PNV TYN LI
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 193 YGFCIVGQLKQAIGLL 208
G G+ + L+
Sbjct: 343 RGLFHAGEFSRGEELM 358
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Query: 26 YSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTT 85
+ T SL +M I PS T +I+ + G+ A + N+ + G +F T
Sbjct: 107 HPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNT 166
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
++ LC V +A + + + F ++ V+Y ++NG C + T ALE L+++ +
Sbjct: 167 ILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
I PN+ YNT++ + + HA + EM + +VVTY +++GF + G++K+A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 206 GLLDE 210
+ DE
Sbjct: 286 NVFDE 290
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 1/210 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +RI P F V A+ L M G L + + +++ C +
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ + + R F T+T+ ++ G CL +AL+ ++ +G N +Y T
Sbjct: 177 VEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++ G + G+ A EF +++ + +VV Y T++ + A N++ EMI +G
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+V TYNA+I C ++ A+ + +E
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEE 325
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ I P + +N +L + A +M+ +VT + +++ G+
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +V +++ G P+ T+ +I+ LC + NV A+ + ++ +G+ N +Y
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI GL GE S E ++++E + PN YN +I + + V A L+ +M
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 181 ISPNVVTYNALIYGFCI 197
PN+ TYN LI G +
Sbjct: 401 CLPNLDTYNILISGMFV 417
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 108 bits (270), Expect = 3e-24, Method: Composition-based stats.
Identities = 63/209 (30%), Positives = 109/209 (52%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + ++ L K + A+ L +M+ G +PS V ++LI+ C G
Sbjct: 213 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 272
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T ++ N+ +G P +T+ TLI GLCL+G + +A+ + +++ N V+YGT
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LINGL K + A+ L +E + N +Y+ +I L K+ A +L+ +M KG
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
PN+V Y+ L+ G C G+ +A +L+
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Score = 100 bits (249), Expect = 7e-22, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 100/206 (48%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
+ M I+P + FN V+ +L K + AI + R M P T L++ C +
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A +L + G P+ + + LI GLC +G++ R + D + +G N+V+Y TL
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I+GLC G+ A+ L ++ IPN V Y T+I+ L K + A L S M +G
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGL 207
N Y+ LI G G+ ++A+ L
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSL 384
Score = 98.6 bits (244), Expect = 3e-21, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 3/200 (1%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
++ +++ L K A+SL R+M G P++V S+L++ C G+ A +L ++
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
G P T+++L+KG G A+Q + G N+ Y LI+GLC +G
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK---GISPNVVTYN 189
A+ ++ I P+ V Y++II LC + A LY EM+ + P+VVTYN
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 190 ALIYGFCIVGQLKQAIGLLD 209
L+ G C+ + +A+ LL+
Sbjct: 545 ILLDGLCMQKDISRAVDLLN 564
Score = 95.9 bits (237), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 104/210 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P + + ++ LVK + + A+ L ME G + S+LI+ G+
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S+ + ++G +P + ++ L+ GLC G + A + + ++A G N +Y +
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ G K G A++ ++++ N Y+ +ID LC V A ++S+M+ G
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I P+ V Y+++I G C +G + A+ L E
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Score = 90.9 bits (224), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 96/198 (48%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N ++ L A+SL +M + P+ VT LIN + T A +
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L+++ +RG+ ++ LI GL G A+ + +G + N V Y L++GLC+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ + A E L ++ +PN Y++++ K L A ++ EM G S N
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 188 YNALIYGFCIVGQLKQAI 205
Y+ LI G C VG++K+A+
Sbjct: 470 YSVLIDGLCGVGRVKEAM 487
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 6/211 (2%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAIS-----LSRQMEITGITPSLVTLSILINCHCY 57
+ R + FN VL ++ Y + ++ M + I+P+ ++ +++I C
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPNGLSFNLVIKALCK 199
Query: 58 LGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS 117
L A V + +R P T+ TL+ GLC + A+ D + ++G + V
Sbjct: 200 LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
Y LI+GLCK G+ + + + + + +PN V YNT+I LC + A +L M+
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
PN VTY LI G + A+ LL
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 82 TFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLN----QVSYGTLINGLCKMGETSAALEF 137
+F +++ + G HR L+F+D V+ +N +S+ +I LCK+ A+E
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 138 LRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCI 197
R + + +P+ Y T++D LCK+ + A L EM +G SP+ V YN LI G C
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 198 VGQLKQAIGLLD 209
G L + L+D
Sbjct: 270 KGDLTRVTKLVD 281
Score = 54.7 bits (130), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 17/180 (9%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL---KRGFQPTTITFTT 85
A+ + +M GI P V S +I C +G +A + +L + QP +T+
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
L+ GLC++ ++ RA+ + +L +G + ++ T +N L E S + + R +L
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL---SEKSNSCDKGRSFLEEL 602
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
++ L K VS AC + M+ K ++P T+ ++ C ++ AI
Sbjct: 603 VV-----------RLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q P +LT+L + + AI R+M G P+L+ + LI+ C G
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYG 119
AF +L +++ G++P T T LI GLC RG +A + F +V + ++ N +Y
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
++I G CK + + A +++ Q + PNV Y T+I+ CK A L + M +
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G PN+ TYNA I C + +A LL++
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 1/209 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P +I F ++ L K A + +M G P++ T + LI+ C G
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 61 TTSAFSVLANILKRG-FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
T AF + +++ ++P T+T++I G C ++RA + QG N +Y
Sbjct: 338 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 397
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
TLING CK G A E + + + +PN+ YN IDSLCK + A L ++
Sbjct: 398 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLL 208
G+ + VTY LI C + QA+
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFF 486
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+TP I N VL V+ A ++ +M + G+ P + +++ G+ A
Sbjct: 178 LTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEAD 237
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
L +++RGF P T T ++ LC G V+RA+ + ++ GF+ N +++ +LI+GL
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI-SPN 184
CK G A E L ++ PNV + +ID LCK A L+ +++ PN
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPN 357
Query: 185 VVTYNALIYGFCIVGQLKQA 204
V TY ++I G+C +L +A
Sbjct: 358 VHTYTSMIGGYCKEDKLNRA 377
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +N + SL K A L + G+ VT +ILI C A +
Sbjct: 426 PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAF 485
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ K GF+ LI C + + + + +V++ G + +Y ++I+ CK
Sbjct: 486 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCK 545
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ AL++ ++ +P+ Y ++I LCK ++V AC LY MI +G+SP VT
Sbjct: 546 EGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT 605
Query: 188 YNALIYGFCIVGQLKQAIGLLD 209
L Y +C A+ LL+
Sbjct: 606 RVTLAYEYCKRNDSANAMILLE 627
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 91/182 (50%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
+ A+ + M+ G+TPS +T++ ++ LG A +V + RG P + ++ +
Sbjct: 164 NEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLM 223
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
+ G G + A ++ ++ +GF + + ++ LC+ G + A+ + R++
Sbjct: 224 VIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGF 283
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIG 206
PN++ + ++ID LCK + A + EM+ G PNV T+ ALI G C G ++A
Sbjct: 284 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 343
Query: 207 LL 208
L
Sbjct: 344 LF 345
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 88/198 (44%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + + ++ K + A L +M+ G+ P++ T + LIN HC G A+ +
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ + GF P T+ I LC + A + + + G + V+Y LI CK
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ + AL F ++ ++ + N +I + C+ + + L+ ++ G+ P T
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 535
Query: 188 YNALIYGFCIVGQLKQAI 205
Y ++I +C G + A+
Sbjct: 536 YTSMISCYCKEGDIDLAL 553
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
G+ P+ T + +I+C+C G A N+ + G P + T+ +LI GLC + V A
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Query: 100 LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDS 159
+ ++ ++ +G +V+ TL CK +++ A+ L ++ +L I V T++
Sbjct: 588 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTV---RTLVRK 644
Query: 160 LCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
LC + V A + +++ K S + VT A
Sbjct: 645 LCSEKKVGVAALFFQKLLEKDSSADRVTLAAF 676
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%)
Query: 58 LGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS 117
+G+ A ++ ++ +G P++IT +++ G + A D + +G + S
Sbjct: 160 IGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 219
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
Y ++ G + G+ A +L + + IP+ I+ +LC++ LV+ A + +MI
Sbjct: 220 YKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMI 279
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G PN++ + +LI G C G +KQA +L+E
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEE 312
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 107 bits (266), Expect = 7e-24, Method: Composition-based stats.
Identities = 57/191 (29%), Positives = 101/191 (52%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
RI P ++ ++ V+ K + A++L +M GI V+ + L++ + +G++ A
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
+L + G + +T+ L+ G +G + + + N ++Y TLI+G
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
K G A+E R+ + + +VV+Y+ +ID+LCK+ LV A +L EM +GISPN
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 185 VVTYNALIYGF 195
VVTYN++I F
Sbjct: 584 VVTYNSIIDAF 594
Score = 98.6 bits (244), Expect = 3e-21, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 110/206 (53%), Gaps = 9/206 (4%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+ F+ ++++ ++ + AIS+ M+ G+ P+LVT + +I+ G+ F +A
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA---CGKGGMEFKQVA 324
Query: 70 NIL----KRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLING 124
+ G QP ITF +L+ +C RG + A + D + + + SY TL++
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
+CK G+ A E L Q+ + I+PNVV Y+T+ID K A NL+ EM GI+ +
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
V+YN L+ + VG+ ++A+ +L E
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILRE 469
Score = 90.1 bits (222), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/205 (27%), Positives = 100/205 (48%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P I FN +L + + A +L +M I + + + L++ C GQ AF
Sbjct: 335 VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAF 394
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+LA + + P ++++T+I G G AL + G L++VSY TL++
Sbjct: 395 EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIY 454
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
K+G + AL+ LR++ I +VV YN ++ K +++EM + + PN+
Sbjct: 455 TKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL 514
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
+TY+ LI G+ G K+A+ + E
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFRE 539
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 21/231 (9%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I ++ +N +L K Y + +M+ + P+L+T S LI+ + G
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + G + + ++ LI LC G V A+ D + +G N V+Y +
Sbjct: 530 YKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 121 LINGLCKMGE---------------TSAALEFLRQIEG----QLIIPNVVMYNTIIDSLC 161
+I+ + +S+AL L + EG QL N C
Sbjct: 590 IIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDC 649
Query: 162 KDNLVSHACNL--YSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++ + +C L + +M I PNVVT++A++ + A LL+E
Sbjct: 650 EEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEE 700
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 36/198 (18%)
Query: 49 SILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLA 108
S +I+ G+ T A + G+ T F+ LI G A+ + +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 109 QGFRLNQVSYGTLINGLCKMG-ETSAALEFLRQIEGQLIIP------------------- 148
G R N V+Y +I+ K G E +F +++ + P
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 149 ----------------NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
+V YNT++D++CK + A + ++M VK I PNVV+Y+ +I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 193 YGFCIVGQLKQAIGLLDE 210
GF G+ +A+ L E
Sbjct: 417 DGFAKAGRFDEALNLFGE 434
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P + +N ++ K+ + A+ L +ME ++P + T +ILIN C Q
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + P++ T+ +LI G C N+ +AL + A G N +++ T
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G C + + AA+ ++ + I+P+VV Y +ID+ K+ + A LYS+M+ G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I PN T+ L+ GF G+L AI E
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+L + P ++ F ++ K + TA SL M G+ P+L + LI+ HC G
Sbjct: 295 ILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L+ + P T+T LI GLC+ V A + + + + +Y +
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G CK AL+ ++ + PN++ ++T+ID C + A LY EM +KG
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I P+VVTY ALI +K+A+ L +
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+M+ +P +L LV+ + + + + M G+ P + +L C G +
Sbjct: 157 EMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
+L + G +P +T I LC + A + +++ G N +Y +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+G CK G A ++I ++PNVV++ T++D CK + A +L+ M+ G+
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN+ YN LI+G C G + +A+GLL E
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 97/194 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M RI P +N ++ K + A+ L +M +G+ P+++T S LI+ +C +
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + + +G P +T+T LI N+ AL+ + +L G N ++
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++G K G S A++F ++ Q N V + +I+ LC++ + A +S+M G
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 181 ISPNVVTYNALIYG 194
I+P++ +Y +++ G
Sbjct: 580 ITPDICSYVSMLKG 593
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%)
Query: 26 YSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTT 85
YS L +M GI P++ +I I C + A + + K G P T++
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
+I G C GNV +A + +L N V +GTL++G CK E A +
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
+ PN+ +YN +I CK + A L SEM +SP+V TY LI G CI Q+ +A
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P II F+ ++ + A+ L +M I GI P +VT + LI+ H A
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ +++L+ G P TF L+ G G + A+ F+ Q N V + LI GL
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ G A F + I P++ Y +++ ++ ++ L +MI GI PN+
Sbjct: 560 CQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL 619
Query: 186 VTYNALIYGFCIVGQLKQA 204
+ L + G +K A
Sbjct: 620 LVNQLLARFYQANGYVKSA 638
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 113/205 (55%), Gaps = 3/205 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P I +N +++ K + A+S+ +ME +G+ P++VT + I+ G+
Sbjct: 229 MEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGR 288
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + I K +T+TTLI G C ++ AL+ +V+ ++GF V+Y +
Sbjct: 289 MREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNS 347
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK-DNLVSHACNLYSEMIVK 179
++ LC+ G A L ++ G+ I P+ + NT+I++ CK +++VS A + +MI
Sbjct: 348 ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS-AVKVKKKMIES 406
Query: 180 GISPNVVTYNALIYGFCIVGQLKQA 204
G+ ++ +Y ALI+GFC V +L+ A
Sbjct: 407 GLKLDMYSYKALIHGFCKVLELENA 431
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
+L SLVK + T + ++M G+ ++ ++L++ G A +L+ + ++G
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAAL 135
P T+ TLI C + AL D + G N V+Y + I+G + G A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 136 EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
R+I+ + N V Y T+ID C+ N + A L M +G SP VVTYN+++
Sbjct: 294 RLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 196 CIVGQLKQAIGLLDE 210
C G++++A LL E
Sbjct: 353 CEDGRIREANRLLTE 367
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+P ++ +N +L L + A L +M I P +T + LIN +C + SA
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAV 397
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V +++ G + ++ LI G C + A + ++ +GF +Y L++G
Sbjct: 398 KVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGF 457
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
+ + L + E + + +V +Y +I +CK V +A L+ M KG+ +
Sbjct: 458 YNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDS 517
Query: 186 VTYNALIYGFCIVGQLKQAIGLLD 209
V + + Y + G++ +A L D
Sbjct: 518 VIFTTMAYAYWRTGKVTEASALFD 541
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A+ L ME G +P +VT + ++ C G+ A +L + + +P IT TLI
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
C ++ A++ ++ G +L+ SY LI+G CK+ E A E L + + P
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
Y+ ++D N L E +G+ +V Y LI C + Q+ A L
Sbjct: 446 GYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLF 505
Query: 209 D 209
+
Sbjct: 506 E 506
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 15 KVLTSLVKTKHYSTAISLSRQME--------------ITGIT--PSLVT--LSILINCHC 56
K++ L K KH+ TA L ++ + G++ P V+ S L+ +
Sbjct: 85 KMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYA 144
Query: 57 YLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
G + V I G +P T L+ L + + ++ G N
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIH 204
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
Y L++ K G+ A + L ++E + + P++ YNT+I CK ++ A ++ M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G++PN+VTYN+ I+GF G++++A L E
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE 298
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
F+ ++ K + +I + Q+ G+ P L ++L+N T + + + ++
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
K G + L+ G+ +A + + +G + +Y TLI+ CK
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
AL ++E + PN+V YN+ I ++ + A L+ E I ++ N VTY LI
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLI 314
Query: 193 YGFCIVGQLKQAIGLLD 209
G+C + + +A+ L +
Sbjct: 315 DGYCRMNDIDEALRLRE 331
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N +L L + A + +++ G V+ + LI+ C + AF L ++K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
RG +P T++ LI GL V A+QF D G + +Y +I+G CK T
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
EF ++ + + PN V+YN +I + C+ +S A L +M KGISPN TY +LI
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 194 GFCIVGQLKQAIGLLDE 210
G I+ ++++A L +E
Sbjct: 689 GMSIISRVEEAKLLFEE 705
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML ++P +++ L K +S A+ L Q G T + L++ C G+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF + IL RG +++ TLI G C + + A F D ++ +G + + +Y
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI GL M + A++F + ++P+V Y+ +ID CK + EM+ K
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ PN V YN LI +C G+L A+ L ++
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P ++ FN V+ L Y A +M G+ P+L+T SIL+ +
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ VL + K+GF P I + LI G++++A++ D+++++G L +Y T
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 121 LINGLCKMGETSAALEFLRQI-------------------------------EGQLIIPN 149
LI G CK G+ A L+++ G++++ N
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 150 VV----MYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ + T+I LCK S A L+ + + KG + T NAL++G C G+L +A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 206 GLLDE 210
+ E
Sbjct: 526 RIQKE 530
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N +LTSLV+ + + + G++P + + IN C G+ A + + + +
Sbjct: 230 NILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
G P +TF T+I GL + G A F + ++ +G ++Y L+ GL +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A L+++ + PNV++YN +IDS + ++ A + M+ KG+S TYN LI
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 194 GFCIVGQLKQAIGLLDE 210
G+C GQ A LL E
Sbjct: 409 GYCKNGQADNAERLLKE 425
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + ++ ++ K + +M + P+ V + LI +C G+ + A +
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++ +G P + T+T+LIKG+ + V A + + +G N Y LI+G K
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+G+ LR++ + + PN + Y +I +D V+ A L +EM KGI P+ +T
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y IYG+ G + +A DE
Sbjct: 788 YKEFIYGYLKQGGVLEAFKGSDE 810
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ +N +++ K A +M G+ P T SILI + + A +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ G P T++ +I G C +F D ++++ + N V Y LI C+ G
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
S ALE ++ + I PN Y ++I + + V A L+ EM ++G+ PNV Y A
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
LI G+ +GQ+ + LL E
Sbjct: 721 LIDGYGKLGQMVKVECLLRE 740
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P +I +N ++ S ++ + AI + M G++ + T + LI +C GQ
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 TTSAFSVLANILKRGFQPTTITFT-----------------------------------T 85
+A +L +L GF +FT T
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GLC G +AL+ L +GF ++ + L++GLC+ G+ A ++I G+
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ + V YNT+I C + A EM+ +G+ P+ TY+ LI G + ++++AI
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 206 GLLDE 210
D+
Sbjct: 596 QFWDD 600
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P ++ ++ L AI + G+ P + T S++I+ C +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T ++ + QP T+ + LI+ C G + AL+ + + +G N +Y +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK-DNLVSHACNLYSEMIVK 179
LI G+ + A ++ + + PNV Y +ID K +V C L EM K
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC-LLREMHSK 744
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ PN +TY +I G+ G + +A LL+E
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N +L L + A + +++ G V+ + LI+ C + AF L ++K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
RG +P T++ LI GL V A+QF D G + +Y +I+G CK T
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
EF ++ + + PN V+YN +I + C+ +S A L +M KGISPN TY +LI
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 194 GFCIVGQLKQAIGLLDE 210
G I+ ++++A L +E
Sbjct: 689 GMSIISRVEEAKLLFEE 705
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML ++P +++ L K +S A+ L Q G T + L++ C G+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF + IL RG +++ TLI G C + + A F D ++ +G + + +Y
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI GL M + A++F + ++P+V Y+ +ID CK + EM+ K
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ PN V YN LI +C G+L A+ L ++
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P ++ FN V+ L Y A +M G+ P+L+T SIL+ +
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ VL + K+GF P I + LI G++++A++ D+++++G L +Y T
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 121 LINGLCKMGETSAALEFLRQI-------------------------------EGQLIIPN 149
LI G CK G+ A L+++ G++++ N
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 150 VV----MYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ + T+I LCK S A L+ + + KG + T NAL++G C G+L +A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 206 GLLDE 210
+ E
Sbjct: 526 RIQKE 530
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N +LTSLV+ + + + G++P + + IN C G+ A + + + +
Sbjct: 230 NILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
G P +TF T+I GL + G A F + ++ +G ++Y L+ GL +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A L+++ + PNV++YN +IDS + ++ A + M+ KG+S TYN LI
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 194 GFCIVGQLKQAIGLLDE 210
G+C GQ A LL E
Sbjct: 409 GYCKNGQADNAERLLKE 425
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + ++ ++ K + +M + P+ V + LI +C G+ + A +
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++ +G P + T+T+LIKG+ + V A + + +G N Y LI+G K
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+G+ LR++ + + PN + Y +I +D V+ A L +EM KGI P+ +T
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y IYG+ G + +A DE
Sbjct: 788 YKEFIYGYLKQGGVLEAFKGSDE 810
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ +N +++ K A +M G+ P T SILI + + A +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ G P T++ +I G C +F D ++++ + N V Y LI C+ G
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
S ALE ++ + I PN Y ++I + + V A L+ EM ++G+ PNV Y A
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
LI G+ +GQ+ + LL E
Sbjct: 721 LIDGYGKLGQMVKVECLLRE 740
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P +I +N ++ S ++ + AI + M G++ + T + LI +C GQ
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 TTSAFSVLANILKRGFQPTTITFT-----------------------------------T 85
+A +L +L GF +FT T
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 86 LIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
LI GLC G +AL+ L +GF ++ + L++GLC+ G+ A ++I G+
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ + V YNT+I C + A EM+ +G+ P+ TY+ LI G + ++++AI
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 206 GLLDE 210
D+
Sbjct: 596 QFWDD 600
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P ++ ++ L AI + G+ P + T S++I+ C +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T ++ + QP T+ + LI+ C G + AL+ + + +G N +Y +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK-DNLVSHACNLYSEMIVK 179
LI G+ + A ++ + + PNV Y +ID K +V C L EM K
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC-LLREMHSK 744
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ PN +TY +I G+ G + +A LL+E
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
++ ++TP +N +L+SL + L +M ++P + T + L+N +C LG
Sbjct: 114 IKYKLTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV 171
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A + +++ G P T+T+ I G C R V A + + G N+VSY L
Sbjct: 172 VEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQL 231
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I GL + + AL L +++ PNV Y +ID+LC S A NL+ +M GI
Sbjct: 232 IYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGI 291
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLD 209
P+ Y LI FC L +A GLL+
Sbjct: 292 KPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ ++P I FN ++ K + A + G P T + I HC +
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKE 205
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+AF V + + G +++T LI GL + AL + N +Y
Sbjct: 206 VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTV 265
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ LC G+ S A+ +Q+ I P+ MY +I S C + + A L M+ G
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ PNV+TYNALI GFC + +A+GLL +
Sbjct: 326 LMPNVITYNALIKGFC-KKNVHKAMGLLSK 354
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ + +++ L + K A+SL +M+ P++ T ++LI+ C GQ + A ++
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ 285
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ + G +P +T LI+ C + A + +L G N ++Y LI G CK
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN- 344
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
A+ L ++ Q ++P+++ YNT+I C + A L S M G+ PN T
Sbjct: 345 VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
++ +L+ + +S +QM + G+ S+ + + +I+C C + +A L + RG
Sbjct: 396 LVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRG 455
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAAL 135
P +TF T + G +RG+V + + +L GF+ + +++ +IN LC+ E A
Sbjct: 456 ISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAF 515
Query: 136 EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
+ +++ I PN + YN +I S C + L+++M G+SP++ YNA I F
Sbjct: 516 DCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Query: 196 CIVGQLKQAIGLL 208
C + ++K+A LL
Sbjct: 576 CKMRKVKKAEELL 588
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+ +N V+ L K + A +M+ GI+P+LVT + ++ + G VL
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLE 484
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+L GF+P ITF+ +I LC + A +L G N+++Y LI C G
Sbjct: 485 KLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTG 544
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+T +++ +++ + P++ YN I S CK V A L M+ G+ P+ TY+
Sbjct: 545 DTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYS 604
Query: 190 ALIYGFCIVGQLKQA 204
LI G+ +A
Sbjct: 605 TLIKALSESGRESEA 619
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M I+P ++ FN L+ + ++ + G P ++T S++INC C +
Sbjct: 451 MQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKE 510
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF +L+ G +P IT+ LI+ C G+ R+++ + G + +Y
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
I CKM + A E L+ + + P+ Y+T+I +L + S A ++S + G
Sbjct: 571 TIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Query: 181 ISPNVVT 187
P+ T
Sbjct: 631 CVPDSYT 637
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 58 LGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS 117
+ + T F L I +RG+ P + TF + L ++ + D +++G +
Sbjct: 335 MAKETGQF--LRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNG 392
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
Y L+ L S +L+Q+ ++ +V YN +ID LCK + +A +EM
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+GISPN+VT+N + G+ + G +K+ G+L++
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEK 485
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 35/222 (15%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P +N V+ +LVK+ A +QM G P T +ILI+ C G A
Sbjct: 176 MKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAI 235
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++ + + G +P T+T LI G + G V AL+ +++ + N+ + T ++G+
Sbjct: 236 RLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGI 295
Query: 126 ------CKMGE--------------------------TSAALE---FLRQIEGQLIIPNV 150
CK E S A E FLR+I + IP+
Sbjct: 296 FRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDS 355
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
+N + L K + + C ++ + +G+ P Y L+
Sbjct: 356 STFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV 397
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
++ L +++ +G S + +LI LG V A I G +P+T + +I
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
L ++ A + + G + ++ +Y LI+G+CK G A+ ++Q+E + P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
NV Y +ID V A M V+ ++PN T ++G
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 78/210 (37%), Gaps = 35/210 (16%)
Query: 34 RQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLR 93
R++ G P T + ++C + + RG +P + L++ L
Sbjct: 344 RKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNA 403
Query: 94 GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMY 153
++ + G + SY +I+ LCK A FL +++ + I PN+V +
Sbjct: 404 QRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTF 463
Query: 154 NT-----------------------------------IIDSLCKDNLVSHACNLYSEMIV 178
NT II+ LC+ + A + + EM+
Sbjct: 464 NTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLE 523
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
GI PN +TYN LI C G +++ L
Sbjct: 524 WGIEPNEITYNILIRSCCSTGDTDRSVKLF 553
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
Y +I+ L K A +Q+ P+ YN +I +CK +V A L +M
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQME 242
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+G PNV TY LI GF I G++ +A+ L+
Sbjct: 243 QEGNRPNVFTYTILIDGFLIAGRVDEALKQLE 274
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%)
Query: 84 TTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEG 143
+ L L +G + +++ + G+R++ LI ++G + QI
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISF 173
Query: 144 QLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQ 203
+ P+ +YN +ID+L K N + A + +M G P+ TYN LI+G C G + +
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 204 AIGLLDE 210
AI L+ +
Sbjct: 234 AIRLVKQ 240
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + ++L L K AI + M +GI P + L+N C G A +
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ + G+ T+T+ L++GLC+ G+++++LQF + ++ +G N +Y L+ K
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
T A++ L +I + PN+V YN ++ CK+ A L+ E+ KG NVV+
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVS 283
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YN L+ C G+ ++A LL E
Sbjct: 284 YNILLRCLCCDGRWEEANSLLAE 306
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ I P + ++ L K + A+ L +ME G + VT + L+ C LG
Sbjct: 132 MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGS 191
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + ++++G P T++ L++ A++ D ++ +G N VSY
Sbjct: 192 LNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNV 251
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ G CK G T A+ R++ + NVV YN ++ LC D A +L +EM
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+P+VVTYN LI G+ +QA+ +L E
Sbjct: 312 RAPSVVTYNILINSLAFHGRTEQALQVLKE 341
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
G P++ + L+ C + A V+ ++ G P +T L+ LC RGNV A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 100 LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDS 159
+Q + + G+ N V+Y L+ GLC +G + +L+F+ ++ + + PN Y+ ++++
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 160 LCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
K+ A L E+IVKG PN+V+YN L+ GFC G+ A+ L E
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE 271
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 39/239 (16%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ +N +LT K A++L R++ G ++V+ +IL+ C C G+ A S+
Sbjct: 244 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSL 303
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG---FRLNQVSYGTLING 124
LA + P+ +T+ LI L G +ALQ +++G FR+ SY +I
Sbjct: 304 LAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE-MSKGNHQFRVTATSYNPVIAR 362
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYN------------------------------ 154
LCK G+ ++ L ++ + PN YN
Sbjct: 363 LCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCT 422
Query: 155 -----TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
++I SLC+ A L EM G P+ TY+ALI G C+ G A+ +L
Sbjct: 423 HDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVL 481
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 4/203 (1%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ +N ++ L + ++ ++ G+ P+ T S L+ T A +L
Sbjct: 177 VTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDE 236
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
I+ +G +P +++ L+ G C G A+ + A+GF+ N VSY L+ LC G
Sbjct: 237 IIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGR 296
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG---ISPNVVT 187
A L +++G P+VV YN +I+SL A + EM KG +
Sbjct: 297 WEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATS 355
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YN +I C G++ + LDE
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDE 378
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 27 STAISLSRQ---MEITGIT--PSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTI 81
ST I+LS + ITG + P L + S + + +FS L +++ G +P
Sbjct: 48 STQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVA 107
Query: 82 TFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQI 141
T L+ LC + +A++ +++++ G + +Y L+N LCK G A++ + ++
Sbjct: 108 HSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKM 167
Query: 142 EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
E N V YN ++ LC ++ + ++ KG++PN TY+ L+
Sbjct: 168 EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGT 227
Query: 202 KQAIGLLDE 210
+A+ LLDE
Sbjct: 228 DEAVKLLDE 236
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 3/209 (1%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
Q R+T +N V+ L K + +M P+ T + + + + +
Sbjct: 348 QFRVT--ATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQ 405
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
AF ++ ++ + T + ++I LC +GN A Q + GF + +Y LI
Sbjct: 406 EAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALI 465
Query: 123 NGLCKMGETSAALEFLRQI-EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
GLC G + A+E L + E + P V +N +I LCK A ++ M+ K
Sbjct: 466 RGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKR 525
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN TY L+ G +L+ A +LDE
Sbjct: 526 MPNETTYAILVEGIAHEDELELAKEVLDE 554
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 56 CYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVV-LAQGFRLN 114
C G T +AF +L + + GF P T++ LI+GLCL G A++ ++ ++ +
Sbjct: 434 CRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPT 493
Query: 115 QVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYS 174
++ +I GLCK+ T A+E + + +PN Y +++ + ++ + A +
Sbjct: 494 VDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLD 553
Query: 175 EMIVKGI 181
E+ ++ +
Sbjct: 554 ELRLRKV 560
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 92/175 (52%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+M GI P +VT S L+N C A V + K G + + T LI LC
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 95 NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
V AL+ + +G N V+Y +LI GLCK G + A L +++ + I PNV+ ++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ID+ K +S ++Y MI I PNV TY++LIYG C+ ++ +AI +LD
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+++ I P I+ + ++ + A+ ++ QME GI +V +ILI+ C
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A VL + RG P +T+++LI GLC G + A + + ++ N +++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ K G+ S + + I PNV Y+++I LC N V A + MI KG
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+PNVVTY+ L GF ++ I LLD+
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDD 213
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 105/204 (51%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I+P ++ ++ ++T L K+ + A +M+ I P+++T S LI+ + G+ +
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
SV +++ P T+++LI GLC+ V A++ D+++++G N V+Y TL NG
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
K ++ L + + + N V NT+I + + A ++ M G+ PN+
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 186 VTYNALIYGFCIVGQLKQAIGLLD 209
+YN ++ G G++++A+ +
Sbjct: 259 RSYNIVLAGLFANGEVEKALSRFE 282
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +M I ++ ++ +L K + A+ + ++M+ GI+P++VT S LI C G+
Sbjct: 39 MEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGR 98
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A L + + P ITF+ LI RG + + + +++ N +Y +
Sbjct: 99 LADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSS 158
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI GLC A++ L + + PNVV Y+T+ + K + V L +M +G
Sbjct: 159 LIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG 218
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
++ N V+ N LI G+ G++ A+G+
Sbjct: 219 VAANTVSCNTLIKGYFQAGKIDLALGVF 246
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+QM I P + ++ ++ L AI + M G TP++VT S L N +
Sbjct: 144 MIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 203
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+L ++ +RG T++ TLIKG G + AL + + G N SY
Sbjct: 204 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 263
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++ GL GE AL ++ +++ Y +I +CK +V A +L+ ++ K
Sbjct: 264 VLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKR 323
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGL 207
+ P+ Y +I G +A L
Sbjct: 324 VEPDFKAYTIMIAELNRAGMRTEADAL 350
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 104 bits (259), Expect = 5e-23, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 3/201 (1%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ + ++ + + A+ + +M+ ITP++ T + LI C+ G+T A
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ + G P TF ++I G C G V +A +F++ + F+ + + L+NGLCK G
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 131 TSAALEFLRQ-IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
T AL F IE + + + V YNT+I + CKD + A +L SEM KG+ P+ TYN
Sbjct: 607 TEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
+ I G+L + LL +
Sbjct: 665 SFISLLMEDGKLSETDELLKK 685
Score = 97.8 bits (242), Expect = 4e-21, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 1/209 (0%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+ ++ P + +N +L ++ K S L M+ G+ P+ VT + L+ +C LG
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
AF ++ + + P T+ LI GLC G++ L+ D + + + + V+Y TLI
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI-VKGI 181
+G ++G + A + + Q+E + N V +N + LCK+ E++ + G
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGF 412
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
SP++VTY+ LI + VG L A+ ++ E
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Score = 93.6 bits (231), Expect = 8e-20, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 101/203 (49%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+P I+ ++ ++ + +K S A+ + R+M GI + +TL+ +++ C + A +
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+L + KRGF +T+ TLI G V +AL+ D + ++ +LI GLC
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
G+T A+E ++ ++P+ +N+II CK+ V A Y+E I P+
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY 592
Query: 187 TYNALIYGFCIVGQLKQAIGLLD 209
T N L+ G C G ++A+ +
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFN 615
Score = 90.5 bits (223), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 91/175 (52%)
Query: 36 MEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGN 95
+++ G +P +VT LI + +G + A ++ + ++G + TIT T++ LC
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 96 VHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNT 155
+ A + +GF +++V+YGTLI G + + ALE +++ I P V +N+
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 156 IIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+I LC A + E+ G+ P+ T+N++I G+C G++++A +E
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Score = 87.4 bits (215), Expect = 6e-18, Method: Composition-based stats.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 5/213 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + P + +N ++ L + L M+ + P +VT + LI+ LG
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCL---RGNVHRALQFHDVVLAQGFRLNQVS 117
+ A ++ + G + +T +K LC R V R ++ ++V GF + V+
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK--ELVDMHGFSPDIVT 418
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
Y TLI K+G+ S ALE +R++ + I N + NTI+D+LCK+ + A NL +
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+G + VTY LI GF ++++A+ + DE
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDE 511
Score = 82.8 bits (203), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 43 PSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGN---VHRA 99
PS I ++ + + G+ A + +++ +P +T TL+ GL + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 100 LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLII-PNVVMYNTIID 158
+ D ++ G LN ++ L+NG C G+ AL L ++ + + P+ V YNTI+
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
++ K +S L +M G+ PN VTYN L+YG+C +G LK+A +++
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 45/238 (18%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEI------TGITPSLVTLSILINC 54
M+++++ P ++ N +L LV+ Y ++ S+S E+ G++ ++ T ++L+N
Sbjct: 157 MIRLKLKPNLLTCNTLLIGLVR---YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNG 213
Query: 55 HCYLGQTTSAFSVLANIL------------------------------------KRGFQP 78
+C G+ A +L ++ K G P
Sbjct: 214 YCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVP 273
Query: 79 TTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFL 138
+T+ L+ G C G++ A Q +++ + +Y LINGLC G LE +
Sbjct: 274 NRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM 333
Query: 139 RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFC 196
++ + P+VV YNT+ID + L A L +M G+ N VT+N + C
Sbjct: 334 DAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLC 391
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 104 bits (259), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 103/208 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P + +N+++ +LVK ++ A+++ + G+ T IL+ C G+
Sbjct: 219 MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR 278
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+L + + +P +T +IK L GN+ +L+ D + + + ++YGT
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ GLCK G E +++G+ I+ + +Y +I+ D V ACNL+ +++ G
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
++ YNA+I G C V Q+ +A L
Sbjct: 399 YIADIGIYNAVIKGLCSVNQVDKAYKLF 426
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 84/198 (42%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N L + H+ A L M+ G PS ILI H + + V +
Sbjct: 161 YNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK 220
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
K GF+P + ++ L G AL ++ G ++ L+ GLCK G
Sbjct: 221 KFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIE 280
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
LE L+++ L P+V Y +I +L + + + ++ EM I P+V+ Y L+
Sbjct: 281 EMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLV 340
Query: 193 YGFCIVGQLKQAIGLLDE 210
G C G++++ L E
Sbjct: 341 VGLCKDGRVERGYELFME 358
Score = 60.5 bits (145), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 44 SLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFH 103
S+ +IL+ +G + S+ + K GF+P + +++ I +G+V A FH
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 104 DVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLII-PNVVMYNTIIDSLCK 162
+ ++ + +Y +L GLC++GE A + +R+ G + P Y + +CK
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCK 625
Query: 163 DNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
+ + EM +G+ N V Y A+I G G +K A
Sbjct: 626 GSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVA 667
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 3/199 (1%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N V+ L A L + + P TLS ++ + + + + +VL I
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIG 465
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVH-RALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
+ G+ P + T K LC + AL ++ +G V Y L+ L KMG+
Sbjct: 466 ELGY-PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSV-YNILMEALYKMGDI 523
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
+L ++ P+ Y+ I + V AC+ + ++I P++ Y +L
Sbjct: 524 QKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSL 583
Query: 192 IYGFCIVGQLKQAIGLLDE 210
G C +G++ + L+ E
Sbjct: 584 TKGLCQIGEIDAVMLLVRE 602
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 103 bits (256), Expect = 1e-22, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 99/204 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML R+ P +I +N ++ K + + + +M+ I PSL+T + L+ G
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +VL + GF P TF+ L G AL ++ + G ++N +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+N LCK G+ A E L + + ++PN V+YNT+ID C+ + A M +G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ P+ + YN LI FC +G+++ A
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENA 443
Score = 101 bits (252), Expect = 3e-22, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 92/187 (49%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
++P + +N ++ + + + ++ME G P++V+ LINC C + A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V ++ RG P + LI G C +G + A +F +L +G LN V+Y TLI+GL
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
G+ S A + L +I + + P+V YN++I V LY EM GI P +
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 186 VTYNALI 192
TY+ LI
Sbjct: 635 KTYHLLI 641
Score = 95.9 bits (237), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/190 (29%), Positives = 96/190 (50%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P +I FN +L L K A ++ ++M+ G P T SIL + + + +A
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V + G + T + L+ LC G + +A + +A+G N+V Y T+I+G
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ G+ A + +E Q + P+ + YN +I C+ + +A ++M +KG+SP+V
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 186 VTYNALIYGF 195
TYN LI G+
Sbjct: 460 ETYNILIGGY 469
Score = 92.4 bits (228), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 84/175 (48%)
Query: 36 MEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGN 95
ME G+ P + + LI C LG+ +A + + +G P+ T+ LI G +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 96 VHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNT 155
+ + G N VSYGTLIN LCK + A R +E + + P V +YN
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 156 IIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ID C + A EM+ KGI N+VTYN LI G + G+L +A LL E
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Score = 90.9 bits (224), Expect = 6e-19, Method: Composition-based stats.
Identities = 58/210 (27%), Positives = 101/210 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + +N ++ + A +M++ G++PS+ T +ILI + +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
F +L + G P +++ TLI LC + A + +G Y
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G C G+ A F +++ + I N+V YNT+ID L +S A +L E+ KG
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+V TYN+LI G+ G +++ I L +E
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Score = 85.9 bits (211), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 6/206 (2%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
++P + +N ++ A S++M GI +LVT + LI+ G+ + A
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L I ++G +P T+ +LI G GNV R + ++ + G + +Y LI+ L
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-L 643
Query: 126 CKMGETSAALEFLRQIEGQLII-PNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
C T +E ++ G++ + P++++YN ++ + A NL +MI K I +
Sbjct: 644 C----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLD 699
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
TYN+LI G VG+L + L+DE
Sbjct: 700 KTTYNSLILGQLKVGKLCEVRSLIDE 725
Score = 81.3 bits (199), Expect = 5e-16, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ + ++ L K A + R ME G++P + ++LI+ C G+ AF
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+LK+G + +T+ TLI GL + G + A + +G + + +Y +LI+G
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G + +++ I P + Y+ +I SLC + L+ EM +K P+++
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLK---PDLLV 667
Query: 188 YNALIYGFCIVGQLKQAIGL 207
YN +++ + + G +++A L
Sbjct: 668 YNGVLHCYAVHGDMEKAFNL 687
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+L+ P + K + + VK + L +M+ I PS+ ++LI+ C +
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +L R P+ IT+ TLI G C GN ++ + + + A + +++ T
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVV--------------------MYNTIIDS- 159
L+ GL K G A L++++ +P+ +Y T +DS
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 160 --------------LCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
LCK+ + A + + KG+ PN V YN +I G+C G L
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 90/204 (44%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P +L LVKTK + I++ + + PS I L
Sbjct: 140 IYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL 199
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ + P+ + LI GLC ++ A Q D +LA+ + ++Y TLI+G
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK G + + +++ I P+++ +NT++ L K +V A N+ EM G P+
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 186 VTYNALIYGFCIVGQLKQAIGLLD 209
T++ L G+ + + A+G+ +
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYE 343
Score = 75.5 bits (184), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 12 EFNKVLTSLV--KTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+F+ +L S++ ++K S A L + GI PS +L++L++ Q +V
Sbjct: 109 DFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFL 168
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQF-----HDVVLAQGFRLNQVSYGTLING 124
NIL+ F+P+ + I+ +V + L+ HD + F Y LI+G
Sbjct: 169 NILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVF-----IYNVLIDG 223
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
LCK + A + ++ + ++P+++ YNT+ID CK + + M I P+
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
++T+N L+ G G ++ A +L E
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKE 309
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 83/191 (43%), Gaps = 6/191 (3%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P + +N +++ + I+L +M+ +GI P+L T +LI+ C T
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-C----TKEGI 649
Query: 66 SVLANIL-KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
+ + + +P + + ++ + G++ +A ++ + L++ +Y +LI G
Sbjct: 650 ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
K+G+ + ++ + + P YN I+ C+ A Y EM KG +
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Query: 185 VVTYNALIYGF 195
V N L+ G
Sbjct: 770 VCIGNELVSGL 780
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
++ S K + A+ + ++M + V +++I C G +A+ + +++KRG
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAAL 135
P T+ TLI LC G A H + G +Q+SY +I GLC G+ + A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 136 EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
EFL + ++P V+++N +ID + S A ++ + M+ G+ PNV T NALI+G+
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 196 CIVGQLKQAIGLLDE 210
G+L A + +E
Sbjct: 451 VKGGRLIDAWWVKNE 465
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +M +P + +N ++ L + A+ L M GI P+ VT +I+++ C G
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 61 T-TSAFSVLANILK--RGFQPTTITFTTLIKGLCLR-GNVHRALQFHDVVLAQGFRLNQV 116
+ +L IL + P I T++ C + GNV +AL+ + + + V
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
Y +I GLC G AA F+ + + + P+V YNT+I +LCK+ AC+L+ M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQA 204
G++P+ ++Y +I G CI G + +A
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P + +N ++++L K + A L M+ G+ P ++ ++I C G
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A L ++LK P + + +I G G+ AL +++L+ G + N +
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G K G A ++ I P+ YN ++ + C + A LY EM+ +G
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
P+++TY L+ G C G+LK+A LL
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLL 533
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
A+ L ++M +G+ P L+T + L+N C G A ++ + + G P +++ TL
Sbjct: 138 DAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTL 197
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC-------------------- 126
IKGLC NV +AL + + G R N+V+ +++ LC
Sbjct: 198 IKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSS 257
Query: 127 -------------------KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVS 167
K G ALE +++ + + + V+YN II LC +
Sbjct: 258 QANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMV 317
Query: 168 HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGL 207
A +M+ +G++P+V TYN LI C G+ +A L
Sbjct: 318 AAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + + +N ++ L + + A M G+ P + T + LI+ C G+
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK 350
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + G P I++ +I+GLC+ G+V+RA +F +L + +
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G + G+TS+AL L + + PNV N +I K + A + +EM
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I P+ TYN L+ C +G L+ A L DE
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQLYDE 500
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%)
Query: 84 TTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEG 143
+++++ LCL+G + AL ++ G +++ L+NGLCK G A +R++
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 144 QLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVG 199
PN V YNT+I LC N V A L++ M GI PN VT N +++ C G
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML + P + N ++ VK A + +M T I P T ++L+ C LG
Sbjct: 431 MLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGH 490
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
AF + +L+RG QP IT+T L++GLC +G + +A + A G ++ V +
Sbjct: 491 LRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
+ +++ LC G+ AAL +++ +IP ++ +N +++ LCK + A L EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
G SPN V+YN LI G C V + +A+ L +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFN 215
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ +N V+ + S+A+S+ M G+ P++ T + LI+ + G+ A+ V
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ P T T+ L+ C G++ A Q +D +L +G + + ++Y L+ GLC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 128 MGETSAALEFLRQIEG 143
G A L +I+
Sbjct: 523 KGRLKKAESLLSRIQA 538
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 108/260 (41%), Gaps = 51/260 (19%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ TP ++ + ++ + +K K S A L M G P++VT S LI+ HC GQ
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 61 TTSAFSVLANIL----------------KRGFQPTTITFTTLIKGLCLRGNVHRALQFHD 104
A + + +P +T+ L+ G C V A + D
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 105 VVLAQGFRLNQVSYGTLINGLCKMGETSAALEF--------------------------- 137
+ +G NQ+ Y LI+GLCK+G+ A E
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 138 --------LRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
L ++ PNVV+Y +ID LCK A L M KG PNVVTY
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 190 ALIYGFCIVGQLKQAIGLLD 209
A+I GF ++G+++ + LL+
Sbjct: 784 AMIDGFGMIGKIETCLELLE 803
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 16/220 (7%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P ++KVL L A L +M+ G+ + T +I+++ C G
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + G P +T+T LI V A + + +L++G N V+Y
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 121 LINGLCKMGETSAALE----------------FLRQIEGQLIIPNVVMYNTIIDSLCKDN 164
LI+G CK G+ A + + +Q + PNVV Y ++D CK +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 165 LVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
V A L M ++G PN + Y+ALI G C VG+L +A
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+M G+ + + +S C C G+ AFSV+ ++ +GF P T T++ ++ LC
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 95 NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
+ A + + G + +Y +++ CK G A ++ ++ PNVV Y
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+I + K VS+A L+ M+ +G PN+VTY+ALI G C GQ+++A + +
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 2/203 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I ++ ++ L K A + +M G +L T S LI+ + + + A V
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L+ +L+ P + +T +I GLC G A + ++ +G + N V+Y +I+G
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+G+ LE L ++ + + PN V Y +ID CK+ + A NL EM +
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y +I GF + +++GLLDE
Sbjct: 852 YRKVIEGF--NKEFIESLGLLDE 872
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
F + L S K Y A S+ R+M G P T S ++N C + AF + +
Sbjct: 454 FTRCLCSAGK---YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G T+T ++ C G + +A ++ + + G N V+Y LI+ K + S
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI----VKGIS------ 182
A E + + +PN+V Y+ +ID CK V AC ++ M V +
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQY 630
Query: 183 ------PNVVTYNALIYGFCIVGQLKQAIGLLD 209
PNVVTY AL+ GFC ++++A LLD
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTS--- 63
+P I FN ++ + + +S A L ++M G P V +ILI C G S
Sbjct: 371 SPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GDKDSLNC 426
Query: 64 -----AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
A + +L G I ++ + LC G +A ++ QGF + +Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
++N LC + A +++ ++ +V Y ++DS CK L+ A ++EM
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
G +PNVVTY ALI+ + ++ A L +
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 35/244 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ P ++ + +++ L K A L + ME G P++VT + +I+ +G+
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA-------LQFHDVVLAQGFR- 112
+ +L + +G P +T+ LI C G + A Q H G+R
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 113 ---------------LNQVS----------YGTLINGLCKMGETSAALEFLRQIE--GQL 145
L+++ Y LI+ L K AL L ++
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
++ YN++I+SLC N V A L+SEM KG+ P + ++ +LI G ++ +A+
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Query: 206 GLLD 209
LLD
Sbjct: 975 LLLD 978
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 39/235 (16%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
++ ++ K K A + +M P++V + +I+ C +G+T A+ ++ +
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
++G QP +T+T +I G + G + L+ + + ++G N V+Y LI+ CK G
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 133 AA---LEFLRQ-------------IEG-----------------QLIIPNVVMYNTIIDS 159
A LE ++Q IEG P + +Y +ID+
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDN 891
Query: 160 LCKDNLVSHACNLYSEMIVKGISPNVV----TYNALIYGFCIVGQLKQAIGLLDE 210
L K + A L E V S +V TYN+LI C+ +++ A L E
Sbjct: 892 LIKAQRLEMALRLLEE--VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 44/249 (17%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
R P +N ++ + +K +A + R+M + + TL C +G+
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A +++ F P T+ +T LI GLC A+ F + + A N V+Y TL+
Sbjct: 288 EALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 123 NG-----------------------------------LCKMGETSAALEFLRQIEGQLII 147
G C G+ S A + L+++ +
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 148 PNVVMYNTIIDSLCKD------NLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
P V+YN +I S+C D +L+ A YSEM+ G+ N + ++ C G+
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 202 KQAIGLLDE 210
++A ++ E
Sbjct: 465 EKAFSVIRE 473
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 13 FNKVLTSLVKTKH-----YSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
F + L LV+ KH +S A+ +++ PS T + LI + SA +
Sbjct: 199 FGEFLNVLVR-KHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI 257
Query: 68 -----LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
LAN+ GF T LC G AL +V + F + V Y LI
Sbjct: 258 HREMSLANLRMDGF-----TLRCFAYSLCKVGKWREALT---LVETENFVPDTVFYTKLI 309
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+GLC+ A++FL ++ +PNVV Y+T++ + + + M+++G
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLL 208
P+ +N+L++ +C G A LL
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLL 395
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 8/210 (3%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCY-LGQTTSAFS 66
P + + K+++ L + + A+ +M T P++VT S L+ C C Q
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL-CGCLNKKQLGRCKR 358
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
VL ++ G P+ F +L+ C G+ A + ++ G V Y LI +C
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Query: 127 KMGET--SAALEFLRQIEGQLIIPNVVMYNTIIDS----LCKDNLVSHACNLYSEMIVKG 180
++ L+ + +++ VV+ + S LC A ++ EMI +G
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ TY+ ++ C +++ A L +E
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEE 508
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 102 bits (255), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 1/209 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTK-HYSTAISLSRQMEITGITPSLVTLSILINCHCYLG 59
M + P + +N +L +++ + + A ++ +M +P+L T IL++ G
Sbjct: 153 MKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+T+ A + ++ RG P +T+T LI GLC RG+ A + + G + V++
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
L++G CK+G A E LR E + + Y+++ID L + + A LY+ M+ K
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLL 208
I P+++ Y LI G G+++ A+ LL
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLL 361
Score = 95.1 bits (235), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/207 (28%), Positives = 94/207 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ +P + F ++ L K S A + M GI+P+ VT +ILI+ C G
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + G P ++ L+ G C G + A + + GF L Y +
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+GL + + A E + + I P++++Y +I L K + A L S M KG
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGL 207
ISP+ YNA+I C G L++ L
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSL 395
Score = 87.0 bits (214), Expect = 9e-18, Method: Composition-based stats.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 35/238 (14%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I+P + + +++ L + A L +M+ +G P V + L++ C LG+ AF
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L K GF +++LI GL +A + + +L + + + + Y LI GL
Sbjct: 289 ELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGL 348
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIID--------------------------- 158
K G+ AL+ L + + I P+ YN +I
Sbjct: 349 SKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDA 408
Query: 159 --------SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
S+C++ LV A +++E+ G SP+V T+NALI G C G+LK+A LL
Sbjct: 409 CTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I+P +N V+ +L SL +M T P T +ILI C G A
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA-LQFHDVVLAQG----FRLNQVSYGT 120
+ I K G P+ TF LI GLC G + A L H + + + RL+ S
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSH-SGNR 487
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+ + + G A L P++V YN +I+ C+ + A L + + +KG
Sbjct: 488 SFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKG 547
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+SP+ VTYN LI G VG+ ++A L
Sbjct: 548 LSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILIN----CHCYLGQTT 62
+P + FN ++ L K+ A L +ME+ + LS N G
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSIL 499
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A+ LA+ G P +++ LI G C G++ AL+ +V+ +G + V+Y TLI
Sbjct: 500 KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
NGL ++G A + + P V Y +++ C+ V A NL+ + + K
Sbjct: 560 NGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKK 614
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 102 bits (254), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/206 (27%), Positives = 107/206 (51%), Gaps = 4/206 (1%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N +L S +K + L + M + GI P T ++LI C +A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ ++G +P TF L++G C G + L+ + + + G N+V Y T+++ C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK---GI-SP 183
G + + + ++ + ++P++V +N+ I +LCK+ V A ++S+M + G+ P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLLD 209
N +TYN ++ GFC VG L+ A L +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFE 315
Score = 96.3 bits (238), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 23/233 (9%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M I P I +N ++ L K S A ++ M+ G+ P VT L++ +C +G+
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A S+L +++ P T L+ L G + A + + +G+ L+ V+
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 121 LINGLCKMGETSAALEFLRQ-------------------IEGQLI----IPNVVMYNTII 157
+++GLC GE A+E ++ ++ LI +P+++ Y+T++
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 158 DSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ LCK + A NL++EM+ + + P+ V YN I+ FC G++ A +L +
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Score = 90.9 bits (224), Expect = 5e-19, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 4/214 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P + +N +++S + + + +M G+ P +VT + I+ C G+
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 61 TTSAFSVLANILKRGF----QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
A + +++ + +P +IT+ ++KG C G + A + + +
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
SY + GL + G+ A L+Q+ + I P++ YN ++D LCK ++S A + M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G+ P+ VTY L++G+C VG++ A LL E
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Score = 86.7 bits (213), Expect = 1e-17, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 23/233 (9%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ P N +L SL K S A L R+M G VT +I+++ C G+
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481
Query: 61 TTSAFSVLA-----------------------NILKRGFQPTTITFTTLIKGLCLRGNVH 97
A ++ ++++ P IT++TL+ GLC G
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541
Query: 98 RALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTII 157
A ++ + + + V+Y I+ CK G+ S+A L+ +E + ++ YN++I
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601
Query: 158 DSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
L N + L EM KGISPN+ TYN I C +++ A LLDE
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Score = 80.1 bits (196), Expect = 9e-16, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N L LV+ + A ++ +QM GI PS+ + +IL++ C LG + A +++ +
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G P +T+ L+ G C G V A ++ N + L++ L KMG S
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS---------- 182
A E LR++ + + V N I+D LC + A + M V G +
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Query: 183 -------------PNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+++TY+ L+ G C G+ +A L E
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAE 549
Score = 77.0 bits (188), Expect = 9e-15, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +N +L K A +L + SL + +I + G+ A +V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + +G P+ ++ L+ GLC G + A ++ G + V+YG L++G C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+G+ AA L+++ +PN N ++ SL K +S A L +M KG + VT
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 188 YNALIYGFCIVGQLKQAIGLL 208
N ++ G C G+L +AI ++
Sbjct: 469 CNIIVDGLCGSGELDKAIEIV 489
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+++ P +I ++ +L L K ++ A +L +M + P V +I I+ C G+
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+SAF VL ++ K+G + T+ +LI GL ++ + D + +G N +Y T
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK 162
I LC+ + A L ++ + I PNV + +I++ CK
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 97/250 (38%), Gaps = 42/250 (16%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ I P FN ++ +L + A L +M G P+ T IL+ +C G
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T +L + G P + + T++ C G + + + + +G + V++ +
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 121 LINGLCKMGETSAALEFLRQIEGQ----LIIPNVVMYNTIIDSLCKDNLVSHACNLYS-- 174
I+ LCK G+ A +E L PN + YN ++ CK L+ A L+
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 175 ---------------------------------EMIVKGISPNVVTYNALIYGFCIVGQL 201
+M KGI P++ +YN L+ G C +G L
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 202 KQA---IGLL 208
A +GL+
Sbjct: 378 SDAKTIVGLM 387
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 84 TTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVS-YGTLINGLCKMGETSAALEFLRQI 141
T I + +R +H +Q H+++L+ + ++S ++++ K A + +
Sbjct: 42 TPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLV 101
Query: 142 EGQLI--IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVG 199
+ P+V +YN +++S K+ V LY +M++ GI+P T+N LI C
Sbjct: 102 RSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSS 161
Query: 200 QLKQAIGLLDE 210
+ A L DE
Sbjct: 162 CVDAARELFDE 172
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHY-------STAISLSRQMEITGITPSLVTLSILIN 53
M+Q I P + F ++ + K + TA+S+ Q E G+ S++ N
Sbjct: 655 MMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE--GL------YSLMFN 706
Query: 54 CHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
GQ A +L +L RGF+ T + L++ LC + + A ++ +G+
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Query: 114 NQVSYGTLINGLCKMGETSAALEF 137
+ + +I+GL KMG A F
Sbjct: 767 DPAALMPVIDGLGKMGNKKEANSF 790
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 6/197 (3%)
Query: 16 VLTSLV----KTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANI 71
V TSL+ + + A L ++ G++PS T LI+ C +G+ +A ++ +
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
+G T + F TLI G C +G V A +DV+ +GF+ + + T+ + ++
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 132 SAALEFL-RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
A ++L R +EG + + + V Y +ID CK+ V A L+ EM KG+ PN +TYN
Sbjct: 451 DEAKQWLFRMMEGGVKL-STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 191 LIYGFCIVGQLKQAIGL 207
+IY +C G++K+A L
Sbjct: 510 MIYAYCKQGKIKEARKL 526
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 102/203 (50%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P +N ++ + VK + +S + + M+ G+ + VT ++L+ G+ + A
Sbjct: 255 IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAE 314
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ + +RG + +T+LI C +GN+ RA D + +G + +YG LI+G+
Sbjct: 315 KLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK+GE AA + +++ + + V++NT+ID C+ +V A +Y M KG +V
Sbjct: 375 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADV 434
Query: 186 VTYNALIYGFCIVGQLKQAIGLL 208
T N + F + + +A L
Sbjct: 435 FTCNTIASCFNRLKRYDEAKQWL 457
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN ++ + A + ME G + T + + +C L + A L ++
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G + +T+++T LI C GNV A + + ++G + N ++Y +I CK G+
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A + +E + P+ Y ++I C + V A L+SEM +KG+ N VTY +I
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 193 YGFCIVGQLKQAIGLLDE 210
G G+ +A GL DE
Sbjct: 582 SGLSKAGKSDEAFGLYDE 599
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%)
Query: 17 LTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGF 76
L + K + + + R+M +G+ ++ +L+I++ C G+ + ++ +G
Sbjct: 196 LVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGI 255
Query: 77 QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALE 136
+P T+ T+I + + V+ G N+V+Y L+ K G+ S A +
Sbjct: 256 KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 137 FLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFC 196
++ + I +V +Y ++I C+ + A L+ E+ KG+SP+ TY ALI G C
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375
Query: 197 IVGQLKQAIGLLDE 210
VG++ A L++E
Sbjct: 376 KVGEMGAAEILMNE 389
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + N + + + K Y A +M G+ S V+ + LI+ +C G
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + +G QP IT+ +I C +G + A + + A G + +Y +
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G C A+ ++ + + N V Y +I L K A LY EM KG
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 181 ISPNVVTYNALI 192
+ + Y ALI
Sbjct: 605 YTIDNKVYTALI 616
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
V+ L + + L ++ + GI P T + +IN + + VL + K G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAAL 135
+T+T L++ G + A + D + +G + Y +LI+ C+ G A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 136 EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
++ + + P+ Y +ID +CK + A L +EM KG++ V +N LI G+
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 196 CIVGQLKQAIGLLD 209
C G + +A + D
Sbjct: 410 CRKGMVDEASMIYD 423
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +N +L SL+ K Y + QM G TP ++T +I++ + LG+T + +
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L ++K GF P T+ L+ L AL + + G + + TLI+GL +
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ A F+ + P+VV Y +I + A ++ EM KG PNV T
Sbjct: 340 AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YN++I GFC+ G+ K+A LL E
Sbjct: 400 YNSMIRGFCMAGKFKEACALLKE 422
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ TP ++ +N V+ + + L +M G +P L T +IL++ +
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A ++L ++ + G +P I FTTLI GL G + F D + G + V Y
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G GE A E +++ + +PNV YN++I C AC L EM +G
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+PN V Y+ L+ G++ +A
Sbjct: 428 CNPNFVVYSTLVNNLKNAGKVLEA 451
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ +P + +N +L L A++L M G+ P ++ + LI+ G+
Sbjct: 283 MVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK 342
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + +K G P + +T +I G G + +A + + +G N +Y +
Sbjct: 343 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNS 402
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G C G+ A L+++E + PN V+Y+T++++L V A + +M+ KG
Sbjct: 403 MIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 102 bits (253), Expect = 2e-22, Method: Composition-based stats.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 36/240 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+L P ++ +N ++ +K + A L + I PS+VT + LI+ C G
Sbjct: 365 LLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG---------- 110
A + + + P IT+TTL+KG GN+ A + +D +L +G
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 111 --------------FRLNQ------------VSYGTLINGLCKMGETSAALEFLRQIEGQ 144
FRL++ Y I+GLCK+G A+EF R+I
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 145 LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
++P+ V Y T+I ++ A NLY EM+ K + P+V+TY LIYG G+L+QA
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Score = 87.8 bits (216), Expect = 5e-18, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 6/205 (2%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+TP FN ++ K + A ++ +M GI P+ T +I I C G+ A
Sbjct: 306 VTP--YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L+++ P +++ TL+ G G A D + A + V+Y TLI+GL
Sbjct: 364 ELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ G A ++ QLI P+V+ Y T++ K+ +S A +Y EM+ KGI P+
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
Y G +G +A L +E
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEE 504
Score = 85.1 bits (209), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 87/184 (47%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N + L K + AI R++ G+ P VT + +I + GQ A ++
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+L++ P+ IT+ LI G G + +A Q+ + +G R N +++ L+ G+CK
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A +L ++E + I PN Y +I C LY EM+ K I P+ T
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Query: 188 YNAL 191
+ AL
Sbjct: 693 HRAL 696
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 4/210 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ P + N VL L ++ + A ++ M GI P+++T + +++ G
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + +R + + +T+ LI G G + A +FH + GF + S+
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G CK G A ++ I P YN I +LC + A L S M
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM---- 369
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+P+VV+YN L++G+ +G+ +A L D+
Sbjct: 370 AAPDVVSYNTLMHGYIKMGKFVEASLLFDD 399
Score = 74.7 bits (182), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 78/168 (46%)
Query: 43 PSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF 102
P L ++ I+ C +G A I + G P +T+TT+I+G G A
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 103 HDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK 162
+D +L + + ++Y LI G K G A ++ +++ + + PNV+ +N ++ +CK
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 163 DNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ A +M +GI PN +Y LI C + ++ + L E
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 680
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ F ++ ++ +K+ A+ L ++ G P + ++ C L + + A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V + + G +P IT+ TLI GL G V A + ++ G+ + +Y +L+NG+
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ GE+ AL L ++E + PN YNT++ LCK L+ LY M G+
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES 405
Query: 186 VTYNALIYGFCIVGQLKQAIGLLD 209
Y L+ G++ +A + D
Sbjct: 406 NGYATLVRSLVKSGKVAEAYEVFD 429
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILIN--CHCYL 58
M+ + P + + + SL +T A L +++ P T + L+ C C
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 59 GQTTSAFSVLANILKRGF--QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
F + ++ F +P ++FT LI +C N+ A+ + GF+ +
Sbjct: 210 LHVVYEF---VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
Y T++ G C + + S A+ ++++ + + P+ + YNT+I L K V A M
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ G P+ TY +L+ G C G+ A+ LL+E
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEE 360
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P I +N ++ L K A + M G P T + L+N C G+
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A S+L + RG P T+ TL+ GLC + + ++ ++++ + G +L Y T
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTI 156
L+ L K G+ + A E + + Y+T+
Sbjct: 411 LVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 44/173 (25%)
Query: 76 FQPTTITFTTLIKGLCLR-----GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
F+P TF L+ C NVHR L ++++ G +QV+ + LC+ G
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVL---NLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK---------------DN----------- 164
A + ++++ + P+ YN ++ LCK D+
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 165 -LVSHACN---------LYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGL 207
L+ + CN L S++ G P+ YN ++ GFC + + +A+G+
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ M I P + + L + K K + GI S + LI C LG
Sbjct: 634 MMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGM 693
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A V+ ++ RGF P T+TF +L+ G + +V +AL + V++ G N +Y T
Sbjct: 694 TKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNT 753
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I GL G ++L +++ + + P+ YN +I K + + +Y EMI G
Sbjct: 754 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 813
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P TYN LI F VG++ QA LL E
Sbjct: 814 LVPKTSTYNVLISEFANVGKMLQARELLKE 843
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +M + P + + ++ SL K Y A++L QM + GI LV ++L++ G
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L+ P +T+T L+ GLC G++ A +L + N V+Y +
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+ING K G A+ LR++E Q ++PN Y T+ID L K A L EM + G
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ N +AL+ +G++K+ GL+ +
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKD 494
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P I FN ++ S K + L +M+ GI PSL++ +I++ C G+
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L ++ P T+ + + H+ +L+ G +L++ Y T
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI LCK+G T A + +E + IP+ V +N+++ + V A + YS M+ G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
ISPNV TYN +I G G +K+ L E
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
Query: 34 RQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLR 93
R M ++G P +VT S +IN C G+ +L + + P +T+TTL+ L +
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL-FK 306
Query: 94 GNVHR-ALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVM 152
N++R AL + ++ +G ++ V Y L++GL K G+ A + + + +PNVV
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVT 366
Query: 153 YNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
Y ++D LCK +S A + ++M+ K + PNVVTY+++I G+ G L++A+ LL
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 66/228 (28%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
G++P + L++LI+ C +G+ + A S+L N R T+T+ T+I GLC G A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEA 180
Query: 100 LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQI-EGQLII----------- 147
QF ++ G + VSY TLI+G CK+G A + +I E LI
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNL 240
Query: 148 ----------------PNVVMYNTIIDSLCKD---------------------------- 163
P+VV +++II+ LCK
Sbjct: 241 HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTL 300
Query: 164 -------NLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
N+ HA LYS+M+V+GI ++V Y L+ G G L++A
Sbjct: 301 VDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA 348
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQF-HDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
G P + + +LI + G VH + + ++A G + + LI+ CK+G S
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A+ LR ++I + V YNT+I LC+ L A SEM+ GI P+ V+YN LI
Sbjct: 148 AISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204
Query: 194 GFCIVGQLKQAIGLLDE 210
GFC VG +A L+DE
Sbjct: 205 GFCKVGNFVRAKALVDE 221
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P + V+ L K AI LS++M + G+ + L L+N +G+
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
++ +++ +G I +T+LI G+ AL + + + +G + VSY
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G+ K G+ A + + + + I P++ +N +++S K L+ +M G
Sbjct: 545 LISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 603
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I P++++ N ++ C G++++AI +L++
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQ 633
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + FN ++ H A+S M GI+P++ T + +I G
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L+ + RG +P T+ LI G GN+ ++ + ++A G +Y LI+
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK 162
+G+ A E L+++ + + PN Y T+I LCK
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ I+P + +N ++ L +M+ G+ P T + LI+ +G
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ ++ ++ G P T T+ LI G + +A + + +G N +Y T
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 121 LINGLCKM 128
+I+GLCK+
Sbjct: 859 MISGLCKL 866
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 100 bits (250), Expect = 6e-22, Method: Composition-based stats.
Identities = 61/213 (28%), Positives = 113/213 (53%), Gaps = 8/213 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P ++ N + V+ A+ +M++ GI P++VT + +I +C L +
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLA----QGFRLNQV 116
A +L ++ +G P +++ T++ LC R ++ D++ G +QV
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE---KRIVEVRDLMKKMAKEHGLVPDQV 384
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+Y TLI+ L K AL FL+ + + + + Y+ I+ +LCK+ +S A +L +EM
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Query: 177 IVKG-ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ KG P+VVTY A++ GFC +G++ +A LL
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL 477
Score = 97.8 bits (242), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITG-ITPSLVTLSILINCHCYLGQTTSAFSVLANI 71
++ ++ +L K S A L +M G P +VT + ++N C LG+ A +L +
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
G +P T+++T L+ G+C G A + ++ + N ++Y +++GL + G+
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
S A + +R++ + P V N ++ SLC+D A E + KG + NVV + +
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 192 IYGFCIVGQLKQAIGLLDE 210
I+GFC +L A+ +LD+
Sbjct: 601 IHGFCQNDELDAALSVLDD 619
Score = 96.3 bits (238), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 104/203 (51%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + + +L + +T A + E +P+ +T S++++ G+ + A V
Sbjct: 487 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ ++ +GF P + L++ LC G H A +F + L +G +N V++ T+I+G C+
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
E AAL L + +V Y T++D+L K ++ A L +M+ KGI P VT
Sbjct: 607 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 666
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y +I+ +C +G++ + +L++
Sbjct: 667 YRTVIHRYCQMGKVDDLVAILEK 689
Score = 82.0 bits (201), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+P I ++ ++ L + S A + R+M + G P V +++L+ C G+T A
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ L +G + FTT+I G C + AL D + + +Y TL++ L
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K G + A E ++++ + I P V Y T+I C+ V + +MI + +
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI- 699
Query: 187 TYNALIYGFCIVGQLKQAIGLL 208
YN +I C++G+L++A LL
Sbjct: 700 -YNQVIEKLCVLGKLEEADTLL 720
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 9 PIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVL 68
P++ ++ +L L KTK + + M+ GI + S ++ + GQ A VL
Sbjct: 207 PMVYYS-MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 69 ANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
+ + G +P + T I + +AL+F + + G N V+Y +I G C +
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK-GISPNVVT 187
A+E L + + +P+ V Y TI+ LCK+ + +L +M + G+ P+ VT
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 188 YNALIY 193
YN LI+
Sbjct: 386 YNTLIH 391
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
+ G+ AL+ L ++ + PN+++ NT ID + N + A M V GI PNVV
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TYN +I G+C + ++++AI LL++
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLED 337
Score = 53.5 bits (127), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 59/130 (45%)
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
VL + +RG T F+ ++ G + AL+ ++ G N + T I+
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
+ AL FL +++ I+PNVV YN +I C + V A L +M KG P+ V
Sbjct: 289 RANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 187 TYNALIYGFC 196
+Y ++ C
Sbjct: 349 SYYTIMGYLC 358
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ I P + + +++L SL KH + A + + GI PS T SIL+ +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A V +L+R + + L+ LC G+V + + G + + S+
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
I+ C G+ +A + L +++ ++PNV +N II +LCK+ V A L EMI KG
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+P+ TYN+++ C ++ +A LL
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLL 371
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ ++ +N +L +L K+ + ++M G+ P + +I I+ +C G
Sbjct: 234 MLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGD 293
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
SA+ VL + + P TF +IK LC V A D ++ +G + +Y +
Sbjct: 294 VHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++ C E + A + L +++ +P+ YN ++ L + A ++ M +
Sbjct: 354 IMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERK 413
Query: 181 ISPNVVTYNALIYGFC-IVGQLKQA 204
P V TY +I+G G+L++A
Sbjct: 414 FYPTVATYTVMIHGLVRKKGKLEEA 438
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 69/148 (46%)
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+ A +++ G +P L+ LC + +V+ A +F G + +Y L
Sbjct: 155 SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
+ G ++ + S A + ++ + + +++ YN ++D+LCK V ++ EM G+
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLD 209
P+ ++ I+ +C G + A +LD
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLD 302
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P + +N +L +L K A SL +M+ P+ VT +ILI+ +C + +
Sbjct: 213 VAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSM 268
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L GF P +T T +++ LC G V AL+ + V ++G +++ V+ TL+ G
Sbjct: 269 VLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGY 328
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C +G+ A F ++E + +PNV YN +I C ++ A + +++M I N
Sbjct: 329 CALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNF 388
Query: 186 VTYNALIYGFCIVGQLKQAIGLLD 209
T+N LI G I G+ + +L+
Sbjct: 389 ATFNTLIRGLSIGGRTDDGLKILE 412
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ I + + ++ L T L + M+ +G+ P+ V + L++ C G+
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S+++ + +P +TF LI C + +++ + + GF + V+
Sbjct: 233 VGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++ LC G S ALE L ++E + +VV NT++ C + A + EM KG
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PNV TYN LI G+C VG L A+ ++
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDSALDTFND 378
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+ME G P++ T ++LI +C +G SA ++ + TF TLI+GL + G
Sbjct: 343 EMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Query: 95 NVHRALQ----FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
L+ D G R++ Y +I G K ALEFL ++E + P
Sbjct: 403 RTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEK--LFPRA 458
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
V + + SLC+ + Y +MI +G P+++ + LI+ + G++++++ L+++
Sbjct: 459 VDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELIND 518
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
RI P +N V+ K + A+ +ME + P V S + C G
Sbjct: 424 RIDP----YNCVIYGFYKENRWEDALEFLLKME--KLFPRAVDRSFKLISLCEKGGMDDL 477
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
+ ++ G P+ I LI G + +L+ + ++ +G+ ++ +I G
Sbjct: 478 KTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIG 537
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
CK + ++F+ + + +P+ YN +++ LC + A L+S M+ K I P+
Sbjct: 538 FCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPD 597
Query: 185 VVTYNALIYGFCI 197
+++L+ FC+
Sbjct: 598 PSMWSSLM--FCL 608
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Query: 1 MLQM-RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLG 59
+L+M ++ P ++ + L SL + + QM G PS++ LI+ + G
Sbjct: 448 LLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHG 507
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ + ++ +++ RG+ P + TF +I G C + V ++F + + +G + SY
Sbjct: 508 KIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYN 567
Query: 120 TLINGLCKMGE-TSAALEFLRQIEGQLIIPNVVMYNTII 157
L+ LC G+ A L F R +E + I+P+ M+++++
Sbjct: 568 PLLEELCVKGDIQKAWLLFSRMVE-KSIVPDPSMWSSLM 605
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 1/172 (0%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKR-GFQPTTITFTTLIKGLCLRGNVHR 98
G S T L + C + + + +L + G P F T+I+G + R
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 99 ALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIID 158
+ D+V G + + + ++++ L K A F R++ I +V Y ++
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMK 190
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
L N + L M G++PN V YN L++ C G++ +A L+ E
Sbjct: 191 GLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSE 242
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 58/127 (45%)
Query: 78 PTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEF 137
P + + + LC +G + +D ++ +G + + LI+ + G+ +LE
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLEL 515
Query: 138 LRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCI 197
+ + + +P +N +I CK + V + +M +G P+ +YN L+ C+
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCV 575
Query: 198 VGQLKQA 204
G +++A
Sbjct: 576 KGDIQKA 582
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 99.8 bits (247), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 109/203 (53%), Gaps = 3/203 (1%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+ + ++++ + Y A+++ ++ME G P+L+T ++++N +G + + L
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 70 NILKR-GFQPTTITFTTLIKGLCLRGNVHR-ALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+K G P T+ TLI C RG++H+ A Q + + A GF ++V+Y L++ K
Sbjct: 268 EKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
A++ L ++ P++V YN++I + +D ++ A L ++M KG P+V T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y L+ GF G+++ A+ + +E
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEE 409
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 85/170 (50%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+++ G +P + TL+ +++ + A VL + +RGF P+ T+ +L+
Sbjct: 619 ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSA 678
Query: 95 NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
+ ++ + +LA+G + + +SY T+I C+ A ++ I+P+V+ YN
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
T I S D++ A + MI G PN TYN+++ G+C + + +A
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 80.9 bits (198), Expect = 6e-16, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLS--ILINCHC-YLGQT 61
R P + + +L + K SL+ ++ I P V L +L+ C L +
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA 613
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
AFS L +RGF P T +++ R V +A D + +GF + +Y +L
Sbjct: 614 ERAFSELK---ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
+ + + + E LR+I + I P+++ YNT+I + C++ + A ++SEM GI
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLL 208
P+V+TYN I + ++AIG++
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVV 757
Score = 79.3 bits (194), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 95/205 (46%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P +N ++T + + A + +M+ G + VT + L++ + + A
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
VL ++ GF P+ +T+ +LI G + A++ + + +G + + +Y TL++G
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
+ G+ +A+ ++ PN+ +N I + ++ E+ V G+SP++
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
VT+N L+ F G + G+ E
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKE 479
Score = 77.0 bits (188), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 91/195 (46%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ +N +L K+ A+ + +M + G +PS+VT + LI+ + G A +
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ ++G +P T+TTL+ G G V A+ + + G + N ++ I G+
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
+ ++ +I + P++V +NT++ ++ + S ++ EM G P T+N
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 191 LIYGFCIVGQLKQAI 205
LI + G +QA+
Sbjct: 495 LISAYSRCGSFEQAM 509
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 91/204 (44%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+P I+ +N ++++ + A+ L QM G P + T + L++ G+ SA S
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ + G +P TF IK RG ++ D + G + V++ TL+
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
+ G S ++++ +P +NT+I + + A +Y M+ G++P++
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TYN ++ G +Q+ +L E
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAE 549
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
++P I+ +N +L + S + ++M+ G P T + LI+ + G A
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ----GFRLNQVSYGTL 121
+V +L G P T+ T++ L G ++ + VLA+ + N+++Y +L
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS----EKVLAEMEDGRCKPNELTYCSL 565
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
++ E ++ +I P V+ T++ K +L+ A +SE+ +G
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLD 209
SP++ T N+++ + + +A G+LD
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLD 653
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 48 LSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVL 107
++I+I+ G+ +SA ++ + + GF ++T+LI G A+ +
Sbjct: 176 VAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME 235
Query: 108 AQGFRLNQVSYGTLINGLCKMGET-SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLV 166
G + ++Y ++N KMG + + +++ I P+ YNT+I + +L
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 167 SHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
A ++ EM G S + VTYNAL+ + + K+A+ +L+E
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 67/158 (42%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+P I N +++ + + + A + M+ G TPS+ T + L+ H +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+L IL +G +P I++ T+I C + A + + G + ++Y T I
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDN 164
A+ +R + PN YN+I+D CK N
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 62/141 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + TP + +N ++ ++ + + + R++ GI P +++ + +I +C +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + + G P IT+ T I A+ ++ G R NQ +Y +
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 121 LINGLCKMGETSAALEFLRQI 141
+++G CK+ A F+ +
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDL 795
Score = 50.4 bits (119), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 98/213 (46%), Gaps = 6/213 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYL-G 59
ML +TP + +N VL +L + + + + +ME P+ +T L+ H Y G
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL--HAYANG 572
Query: 60 QTTSAFSVLANILKRG-FQPTTITFTTLIKGLCLRGNV-HRALQFHDVVLAQGFRLNQVS 117
+ LA + G +P + TL+ +C + ++ A + + +GF + +
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVL-VCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
++++ + + A L ++ + P++ YN+++ + + + E++
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
KGI P++++YN +IY +C +++ A + E
Sbjct: 692 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQM-EITGITPSLVTLSILINCHCYLGQTTSAFSVL 68
+ FN +L++ V +K A+ +++ E GITP LVT + +I C G S+
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 69 ANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
+ K GF+P I+F TL++ R + D++ ++ N SY + + GL +
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
+ + AL + ++ + I P+V YN +I + DN + Y+EM KG++P+ VTY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 189 NALIYGFCIVGQLKQAIGLLDE 210
LI C G L +A+ + +E
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEE 358
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++P I +N + L + K ++ A++L M+ GI+P + T + LI +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ ++G P T+T+ LI LC +G++ RA++ + + Y
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKP 373
Query: 121 LINGLCKMGETSAALEFLR 139
++ L G+ A + ++
Sbjct: 374 VVERLMGAGKIDEATQLVK 392
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I +N V+ + + AI + G P ++T ++L+ C + A V
Sbjct: 207 PDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEV 266
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L ++ G P +T+ +L+ C RGN+ +L+ G LN V+Y TL++ LC
Sbjct: 267 LEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCS 326
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
E L + P V+ YN +I+ LCK L+S A + + +M+ + P++VT
Sbjct: 327 HEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVT 386
Query: 188 YNALIYGFCIVGQLKQAIGLL 208
YN ++ G + AI LL
Sbjct: 387 YNTVLGAMSKEGMVDDAIELL 407
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 36/239 (15%)
Query: 8 PPIIEFNKVLTSLV-KTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
PP + VL LV + + AI + M + G P +VT + L+N +C G S
Sbjct: 241 PPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVAS 300
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
V+ +IL G + T+T+ TL+ LC + +++ + ++Y LINGLC
Sbjct: 301 VIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLC 360
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNT------------------------------- 155
K S A++F Q+ Q +P++V YNT
Sbjct: 361 KARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLI 420
Query: 156 ----IIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ID L K L+ A LY +M+ GI P+ +T +LIYGFC +++A +L E
Sbjct: 421 TYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKE 479
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +N ++ +L K H TA+ L M ++G P ++T + +I C G A
Sbjct: 172 PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ L+ G P IT+T L++ +C RA++ + + +G + V+Y +L+N C+
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G ++ I + N V YNT++ SLC + + M P V+T
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT 351
Query: 188 YNALIYGFCIVGQLKQAIGLL 208
YN LI G C L +AI
Sbjct: 352 YNILINGLCKARLLSRAIDFF 372
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 94/196 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P + ++ L + A+ + R M ++G P +T +++I C G
Sbjct: 130 MARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGH 189
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A +L ++ G P IT+ T+I+ + GN +A++F L G ++Y
Sbjct: 190 IRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTV 249
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ +C+ ++ A+E L + + P++V YN++++ C+ + ++ ++ G
Sbjct: 250 LVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG 309
Query: 181 ISPNVVTYNALIYGFC 196
+ N VTYN L++ C
Sbjct: 310 LELNTVTYNTLLHSLC 325
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 92/199 (46%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ +N +L SL +++ + M T P+++T +ILIN C + A
Sbjct: 315 VTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQ 374
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+L++ P +T+ T++ + G V A++ ++ ++Y ++I+GL K G
Sbjct: 375 MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGL 434
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
ALE Q+ I P+ + ++I C+ NLV A + E +G TY
Sbjct: 435 MKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRL 494
Query: 191 LIYGFCIVGQLKQAIGLLD 209
+I G C +++ AI +++
Sbjct: 495 VIQGLCKKKEIEMAIEVVE 513
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q P +I +N ++ L K + S AI QM P +VT + ++ G
Sbjct: 340 MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGM 399
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L + P IT+ ++I GL +G + +AL+ + +L G + ++ +
Sbjct: 400 VDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRS 459
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G C+ A + L++ + Y +I LCK + A + M+ G
Sbjct: 460 LIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAI 205
P+ Y A++ G +G +A+
Sbjct: 520 CKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N++L +L + A L M P + S L+ + Q A +L ++
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
G P TIT+ +I LC +G++ AL + + G + ++Y T+I + G
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A+ F + P ++ Y +++ +C+ + A + +M V+G P++VTYN+L+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 194 GFCIVGQLKQ 203
C G L++
Sbjct: 288 YNCRRGNLEE 297
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%)
Query: 56 CYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQ 115
C G+ T A ++ + + P + + L++GL + +A+ V++ G +
Sbjct: 115 CSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDT 174
Query: 116 VSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSE 175
++Y +I LCK G AL L + P+V+ YNT+I + A + +
Sbjct: 175 ITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKD 234
Query: 176 MIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ G P ++TY L+ C +AI +L++
Sbjct: 235 QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 2/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ P ++ +N +L A + +M +GI + + L+ HC +
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 61 TTSAFSVLANILK-RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
++ + ++ RGF ++++TLI+ C N +A + + + +G +N V+Y
Sbjct: 306 PDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+LI + G +S A + L Q+ + P+ + Y TI+D LCK V A ++++MI
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I+P+ ++YN+LI G C G++ +AI L ++
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+++ ++ L K K + +L ME G P + ++ ++ C + A ++
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+RG +P +++T LI GL G V A++ + ++ G + + L+ GLC +
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 133 AALEFL-RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
A E + +I+ + + V+YN +I CK + A L S M G P++VTYN L
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 192 IYGFCIVGQLKQAIGLLDE 210
+ + LK+A G++ E
Sbjct: 262 LNYYYDNNMLKRAEGVMAE 280
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAIS-LSRQMEITGITPSLVTLSILINCHCYLG 59
M++ I +N++L + H + + ++ME G +V+ S LI C
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRAS 339
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
T A+ + + ++G +T+T+LIK GN A + D + G +++ Y
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
T+++ LCK G A + I P+ + YN++I LC+ V+ A L+ +M K
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ +T+ +I G +L A + D+
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQ 490
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 93/187 (49%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ ++ ++ + + + A L +M G+ ++VT + LI G ++ A +L
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ + G P I +TT++ LC GNV +A + ++ + +SY +LI+GLC+ G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+ A++ ++G+ P+ + + II L + +S A ++ +M+ KG + + +
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 190 ALIYGFC 196
LI C
Sbjct: 505 TLIKASC 511
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I FN L L + A+ M G P +V+ +ILIN G+ T A +
Sbjct: 112 PDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF-HDVVLAQGFRLNQVSYGTLINGLC 126
+++ G P L+ GLC V A + + + + +L+ V Y LI+G C
Sbjct: 172 WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFC 231
Query: 127 KMG--ETSAALE-FLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
K G E + AL+ ++ +I + P++V YN +++ +N++ A + +EM+ GI
Sbjct: 232 KAGRIEKAEALKSYMSKIGCE---PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQL 288
Query: 184 NVVTYNALIYGFCIVGQ 200
+ +YN L+ C V
Sbjct: 289 DAYSYNQLLKRHCRVSH 305
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
++N+ + LV+ + A ++ M+ G + T S I+ C + + ++L++
Sbjct: 45 FDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSD 104
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ GF P F + LC V A+Q ++ +G + VSY LINGL + G+
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG-ISPNVVTYN 189
+ A+E + + P+ ++ LC V A + +E I + + V YN
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 190 ALIYGFCIVGQLKQAIGL 207
ALI GFC G++++A L
Sbjct: 225 ALISGFCKAGRIEKAEAL 242
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ ++P I + +L L K+ + A + M ITP ++ + LI+ C G+
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A + ++ + P +TF +I GL + A + D ++ +GF L++ T
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDT 505
Query: 121 LINGLCKM 128
LI C M
Sbjct: 506 LIKASCSM 513
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 99.4 bits (246), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 100/205 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
++Q + P + +N ++ + K ++ L +M+ G+ PS TL+ + C
Sbjct: 465 IVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCD 524
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L + GF+P T L+K LC G A ++ D V +GF + V+
Sbjct: 525 FVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTA 584
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
I+GL K LE R I P+V+ Y+ +I +LCK A L++EM+ KG
Sbjct: 585 AIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKG 644
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAI 205
+ P V TYN++I G+C G++ + +
Sbjct: 645 LKPTVATYNSMIDGWCKEGEIDRGL 669
Score = 73.9 bits (180), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 78/172 (45%)
Query: 17 LTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGF 76
+ L+K + + L R + G P ++ +LI C +T A + ++ +G
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 77 QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALE 136
+PT T+ ++I G C G + R L + + ++Y +LI+GLC G S A+
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 137 FLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
+++G+ PN + + +I LCK A + EM K + P+ Y
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 3/190 (1%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSR--QMEITGITPSLVTLSILINCHCYLGQTTSAF 65
P +N +L ++ K+ S + +R +M G TL+ ++ +C G++ A
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
SV IL RG+ I+ T L+ C G V +A + +++ + RLN +Y LI+G
Sbjct: 235 SVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGF 293
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
K A + ++ + ++ +Y+ +I LCK + A +LY E+ GI P+
Sbjct: 294 VKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDR 353
Query: 186 VTYNALIYGF 195
L+ F
Sbjct: 354 GILGKLLCSF 363
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 90/235 (38%), Gaps = 35/235 (14%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P N + L + + A+ L ++M G P + + L+ C G+ A
Sbjct: 505 VEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDAC 564
Query: 66 SVLANILKRGFQ-----------------------------------PTTITFTTLIKGL 90
L ++ GF P I + LIK L
Sbjct: 565 KYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKAL 624
Query: 91 CLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
C A + ++++G + +Y ++I+G CK GE L + ++ P+V
Sbjct: 625 CKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDV 684
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ Y ++I LC S A ++EM K PN +T+ ALI G C G +A+
Sbjct: 685 ITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEAL 739
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
I P +LSI+INC + A ++L +I++ G P + + +I+G+C G +
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 100 LQFHDVVLAQGFRLNQVS----YGT-------------------------------LING 124
L+ + G +Q + YG L+
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
LC+ G A ++L + G+ + ++V ID L K+ V L+ ++ G P+
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
V+ Y+ LI C + +A L +E
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNE 639
Score = 47.0 bits (110), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 23/212 (10%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +M + I ++ ++ L K K A+SL +++ +GI P L L+ +
Sbjct: 309 MRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ V+ + + + + + +L +G VH A F
Sbjct: 369 LSRITEVIIGDIDK--KSVMLLYKSLFEGFIRNDLVHEAYSF------------------ 408
Query: 121 LINGLCKMGETSAALEFLRQIE--GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
I L E+ E ++ ++ + I+P+ + +I+ L K N V A L +++
Sbjct: 409 -IQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQ 467
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G+ P + YN +I G C G+ ++++ LL E
Sbjct: 468 NGLIPGPMMYNNIIEGMCKEGRSEESLKLLGE 499
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 98.2 bits (243), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 3/207 (1%)
Query: 1 MLQMR---ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCY 57
+LQM P I+ + ++ LV + H A+++ ++ G++P ++L++ C
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 58 LGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS 117
G+ A + + +L R P + TLI G G+ A + + + +G +++ V
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
+ +I G C+ G AL + ++ + ++P+ Y+TIID K ++ A ++ M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQA 204
PNVVTY +LI GFC G K A
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMA 609
Score = 97.8 bits (242), Expect = 5e-21, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 15/218 (6%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P ++ ++ VK + +TAI + R ME P++VT + LIN C G
Sbjct: 546 MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGD 605
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGN-VHRALQFHDVVLAQGFRLNQVSYG 119
A + R P +T+TTLI+ L + + +A+ + ++++ N+V++
Sbjct: 606 FKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFN 665
Query: 120 TLINGLCKM--------------GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNL 165
L+ G K G++S EF +++ + YN+ + LC +
Sbjct: 666 CLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGM 725
Query: 166 VSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQ 203
V AC +M+ KG SP+ V++ A+++GFC+VG KQ
Sbjct: 726 VKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 92.8 bits (229), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 100/202 (49%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N ++ L K A+ + G+ P+ ++ + LI +C + A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + +RG +P +T+ LI GL + G++ A+ ++ +G + Y L++GLCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A ++ + I+P+ +Y T+ID + A ++S + KG+ +VV
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 188 YNALIYGFCIVGQLKQAIGLLD 209
+NA+I GFC G L +A+ ++
Sbjct: 523 HNAMIKGFCRSGMLDEALACMN 544
Score = 85.1 bits (209), Expect = 3e-17, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 35/238 (14%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I+ +N ++ K A + +++++ G P+L T +IN C G ++ +
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 68 LANILKRGF-----------------------------------QPTTITFTTLIKGLCL 92
L+ + +RG +P T+ LI LC
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 93 RGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVM 152
G A+ F D +G N +SY LI CK E A + L Q+ + P++V
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 153 YNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
Y +I L + A N+ ++I +G+SP+ YN L+ G C G+ A L E
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 2/204 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I N +L+ LVK++ A + +M G + + IL+ C G+ +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRA-LQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ +G P + + T+I G C G++ A L F ++ L +GF ++GT+ING C
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKL-KGFMPTLETFGTMINGFC 286
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K G+ A+ L +++ + + +V N IID+ + +I P+V
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVA 346
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TYN LI C G+ + A+G LDE
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDE 370
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML I P + ++ +++ + A + G+ +V + +I C G
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + + + P T++T+I G + ++ A++ + + N V+Y +
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSE-MIVK 179
LING C G+ A E ++++ + ++PNVV Y T+I SL K++ Y E M+
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTN 655
Query: 180 GISPNVVTYNALIYGF 195
PN VT+N L+ GF
Sbjct: 656 KCVPNEVTFNCLLQGF 671
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ P + + K++ L K A + + ++ G P V + +I C G
Sbjct: 274 MIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGW 333
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
SA + ++K+G +P + +I G RG + F++ +L G+ +S T
Sbjct: 334 LGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNT 393
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G C G++ A E + + + PN + YN +I CK+N V LY E+ G
Sbjct: 394 MIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALG 453
Query: 181 ISPNVVTYNALI 192
+ P+ + Y AL+
Sbjct: 454 LKPSGMAYAALV 465
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 98/209 (46%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ + P + K+++ + +Y+ + M PS+ +I C +
Sbjct: 240 LKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQ 299
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A+ + N+ +G+ P + +TT+I+G C +G + A + ++ +G R N+ +Y +
Sbjct: 300 LEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVM 359
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I+G K GE S F ++ ++ NT+I C A ++ M G+
Sbjct: 360 IHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGV 419
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+PN +TYNALI GFC ++++ + L E
Sbjct: 420 TPNAITYNALIKGFCKENKVEKGLKLYKE 448
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 29 AISLSRQMEITGITPSLVTL-SILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLI 87
AI + ++ GI+ S+VT S+L+ C + + + +++ F I LI
Sbjct: 164 AIEVYNVLKDMGISSSVVTCNSVLLGC-LKARKLDRFWELHKEMVESEFDSERIR--CLI 220
Query: 88 KGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLII 147
+ LC G+V + L QG Q Y LI+G C++G + E L +
Sbjct: 221 RALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF 280
Query: 148 PNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGL 207
P++ +Y II LC + A ++ + KG +P+ V Y +I GFC G L A L
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 208 LDE 210
E
Sbjct: 341 WFE 343
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 75/166 (45%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
P + + ++ + +A L +M G+ P+ +++I+ H G+ + +
Sbjct: 315 APDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEA 374
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+L+ G+ T ++ T+IKG C G A + + G N ++Y LI G C
Sbjct: 375 FYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFC 434
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNL 172
K + L+ ++++ + P+ + Y ++ +L + V+ + NL
Sbjct: 435 KENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P +N ++ K S + +M G ++++ + +I C G+
Sbjct: 344 MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGK 403
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ AF + N+ + G P IT+ LIKG C V + L+ + + A G + + ++Y
Sbjct: 404 SDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAA 463
Query: 121 LINGLCKMGETSA 133
L+ L KM ++ A
Sbjct: 464 LVRNL-KMSDSVA 475
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 1/202 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQM-EITGITPSLVTLSILINCHCYLGQTTSAFS 66
P I ++ ++ L A+ L M GI+P VT +++IN C G+ A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+L + K G P ++ L+ G C G + A Q D V G +L+ V Y TL+N C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
+ GET A++ L +++ + + YN I+ L + A + + +G+ N
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKG 409
Query: 187 TYNALIYGFCIVGQLKQAIGLL 208
+Y ++ C G+L++A+ L
Sbjct: 410 SYRIILNALCCNGELEKAVKFL 431
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 2/207 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGIT-PSLVTLSILINCHCYLGQTTSA 64
+ P FN ++ K + A + +M+ +GI+ P+ +T S L++C ++ A
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 65 FSVLANIL-KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
+ +++ K G P +TF +I G C G V RA + D + G N +Y L+N
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
G CK+G+ A + +++ + + V Y T+++ C++ A L EM
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ +TYN ++ G G+ ++A+ +LD+
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQ 398
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-----GITPSLVTLSILINCHCYLG 59
R+ P + + L L+ S ++LSR++ + G+ P+ +IL+ HC G
Sbjct: 155 RVKPSLNAISTCLNLLID----SGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNG 210
Query: 60 QTTSAFSVLANILKRGFQ-PTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVS 117
AF V+ + + G P +IT++TL+ L A++ F D++ +G + V+
Sbjct: 211 DINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVT 270
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
+ +ING C+ GE A + L ++ PNV Y+ +++ CK + A + E+
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G+ + V Y L+ FC G+ +A+ LL E
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE 363
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
P + ++ ++ K A +++ TG+ V + L+NC C G+T A
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+L + + T+T+ +++GL G ALQ D ++G LN+ SY ++N LC
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
GE A++FL + + I P+ +N ++ LC+ + + G+ P
Sbjct: 420 CNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPK 479
Query: 187 TYNALIYGFCIVGQLKQAIGLLD 209
++ A++ C +L LLD
Sbjct: 480 SWGAVVESICKERKLVHVFELLD 502
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 98.2 bits (243), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 100/198 (50%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
I + ++ + + + ++L ++M+ GI S++I C G+ ++V N
Sbjct: 293 ITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFEN 352
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
++++G +P +T LI G G+V A++ ++ +GF+ + V+Y ++NGLCK G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
AL++ + N + Y+++ID L K V A L+ EM KG + + YNA
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 191 LIYGFCIVGQLKQAIGLL 208
LI F ++ +AI L
Sbjct: 473 LIDAFTKHRKVDEAIALF 490
Score = 94.4 bits (233), Expect = 4e-20, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 98/205 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P + +N ++ LV +A + ME I P +VT + +I +C GQ
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A L ++ RG + IT+ T+I+ + + + + +G ++ ++
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I GLCK G+ + + + PNV +Y +ID K V A L MI +G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAI 205
P+VVTY+ ++ G C G++++A+
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEAL 417
Score = 87.8 bits (216), Expect = 4e-18, Method: Composition-based stats.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 36/241 (14%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P F+ V+ L K + ++ M G P++ ++LI+ + G A
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 382
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L ++ GF+P +T++ ++ GLC G V AL + G +N + Y +LI+GL
Sbjct: 383 RLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGL 442
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSE---------- 175
K G A ++ + + YN +ID+ K V A L+
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 176 --------------------------MIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
MI KGI+P + AL G C+ G++ +A +LD
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 210 E 210
E
Sbjct: 563 E 563
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 35/193 (18%)
Query: 51 LINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG 110
LI LG V + + G +PT T+ L+ GL V A + +V+ +
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 111 FRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDS----------- 159
+ + V+Y T+I G CK G+T A+E LR +E + + + Y T+I +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 160 ------------------------LCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
LCK+ ++ ++ MI KG PNV Y LI G+
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 196 CIVGQLKQAIGLL 208
G ++ AI LL
Sbjct: 373 AKSGSVEDAIRLL 385
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 89/245 (36%), Gaps = 37/245 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ P + + ++ K+ AI L +M G P +VT S+++N C G+
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A G ++ +++LI GL G V A + + + +G + Y
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 121 LINGLCKMGETSAALEFLRQIEGQL----------------------------------- 145
LI+ K + A+ +++E +
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 146 -IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
I P + + LC V+ AC + E+ G+ + + +I C G++K+A
Sbjct: 533 GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEA 591
Query: 205 IGLLD 209
L D
Sbjct: 592 CKLAD 596
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLGQTTSAFSVLANI 71
+N ++ + K + AI+L ++ME G ++ T +IL++ + A + +
Sbjct: 470 YNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMM 529
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
+ +G PT F L GLCL G V RA + D + G L+ + +IN LCK G
Sbjct: 530 IDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD-AACEDMINTLCKAGRI 588
Query: 132 SAALEFL-------RQIEGQLIIPNVVMYNTI 156
A + R++ G++ VM N +
Sbjct: 589 KEACKLADGITERGREVPGRI---RTVMINAL 617
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 56/123 (45%)
Query: 83 FTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIE 142
+ +L+ L L +V R + F + + LI K+G L R+++
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 143 GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLK 202
I P + YN +++ L V A ++ M I P++VTYN +I G+C GQ +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 203 QAI 205
+A+
Sbjct: 275 KAM 277
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGIT---PSLVTLSILINCH---CYLGQTTSAFSV 67
N + L K + AI + M G+T PS + +++ N YL + +
Sbjct: 590 NDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETT 649
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L+++ I +T +I GLC G + +AL ++G LN ++Y +LINGLC+
Sbjct: 650 LSSM-------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQ 702
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G AL +E ++P+ V Y +ID+LCK+ L A L M+ KG+ PN++
Sbjct: 703 QGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIII 762
Query: 188 YNALIYGFCIVGQLKQAI 205
YN+++ G+C +GQ + A+
Sbjct: 763 YNSIVDGYCKLGQTEDAM 780
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 100/199 (50%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ + ++++L + L R++E G V S I+ + G A
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++++G ++++ LI GL GNV AL ++ +G N ++Y +I GL
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CKMG+ A +I I + +Y T+ID +C+ ++ A ++ +M +GI P++
Sbjct: 323 CKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSI 382
Query: 186 VTYNALIYGFCIVGQLKQA 204
+TYN +I G C+ G++ +A
Sbjct: 383 LTYNTVINGLCMAGRVSEA 401
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 30/240 (12%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + ++ ++ ++ L K + A+ L +M G+ P+L+T + +I C +G+
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF + IL G + + TLI G+C +GN++RA + +G + + ++Y T
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 121 LINGLCKMGETSAALEFLRQIEGQLI-----------------------------IP-NV 150
+INGLC G S A E + + G +I IP ++
Sbjct: 388 VINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDL 447
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
VM N ++ + A LY M ++P+ TY +I G+C GQ+++A+ + +E
Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 95/174 (54%)
Query: 37 EITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNV 96
E T + ++ +I+IN C G A ++ + RG TIT+ +LI GLC +G +
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 97 HRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTI 156
AL+ D + G ++V+YG LI+ LCK G A + L + + ++PN+++YN+I
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 157 IDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+D CK A + S ++ ++P+ T +++I G+C G +++A+ + E
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 2/203 (0%)
Query: 9 PIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVL 68
+I++ ++ L K A++L + G+T + +T + LIN C G A +
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 69 ANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
++ G P+ +T+ LI LC G A + D ++++G N + Y ++++G CK+
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 129 GETSAALEFL-RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+T A+ + R++ G+ + P+ +++I CK + A ++++E K IS +
Sbjct: 774 GQTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
+ LI GFC G++++A GLL E
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLRE 855
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 41 ITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRAL 100
+ P+LVT + L++ C LG+ ++ + GF+ + ++ I G G + AL
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 101 QFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
++ +G + VSY LI+GL K G AL L ++ + + PN++ Y II L
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Query: 161 CKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
CK + A L++ ++ GI + Y LI G C G L +A +L +
Sbjct: 323 CKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 41/245 (16%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P +I + ++ L K A L ++ GI LI+ C G
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN 362
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AFS+L ++ +RG QP+ +T+ T+I GLC+ G V A + +++G + ++Y T
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE-----VSKGVVGDVITYST 417
Query: 121 LINGLCKMGETSAALEFLRQ-IEGQL---------------------------------- 145
L++ K+ A LE R+ +E ++
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD 477
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ P+ Y T+I CK + A +++E+ +S V YN +I C G L A
Sbjct: 478 LTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTAT 536
Query: 206 GLLDE 210
+L E
Sbjct: 537 EVLIE 541
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 6/208 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q I P I+ +N V+ L S A +S+ G+ ++T S L++ + +
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQN 427
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + L+ + L+K L G A + + + +Y T
Sbjct: 428 IDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYAT 487
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G CK G+ ALE ++ + + V YN IID+LCK ++ A + E+ KG
Sbjct: 488 MIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ ++ T L++ G K +GL+
Sbjct: 547 LYLDIHTSRTLLHSIHANGGDKGILGLV 574
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 108/277 (38%), Gaps = 70/277 (25%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ +I ++ N +L + + Y A +L R M +TP T + +I +C GQ
Sbjct: 439 LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQI 498
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A + N L++ + + +I LC +G + A + + +G L+ + TL
Sbjct: 499 EEALEMF-NELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTL 557
Query: 122 I-----NG------------------------------LCKMGETSAALEF--------- 137
+ NG LCK G AA+E
Sbjct: 558 LHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGL 617
Query: 138 ---------------LRQIEGQLIIPN----------VVMYNTIIDSLCKDNLVSHACNL 172
LR ++ L++ N V+ Y II+ LCK+ + A NL
Sbjct: 618 TVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNL 677
Query: 173 YSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
S +G++ N +TYN+LI G C G L +A+ L D
Sbjct: 678 CSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 38/172 (22%)
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG--FRLNQVSYGTLINGLCKMGETS 132
G P+++TF +LI +G + A++ +++ + + + +I+G CK+G+
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 133 AALEFLRQ-IEGQLIIPNVVMYNTIIDSLC---------------KDNLVSHACNLYS-- 174
AL F ++ +++PN+V Y T++ +LC +D C YS
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 175 ------------------EMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
EM+ KG++ +VV+Y+ LI G G +++A+GLL
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLL 300
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ +P ++ +N +L + + L +M G +P T +IL++ +
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + L ++ + G P+ + +TTLI GL GN+ F D ++ G R + V Y
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 121 LINGLCKMGETSAALEFLRQ--IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
+I G GE A E R+ ++GQL PNV YN++I LC AC L EM
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQL--PNVFTYNSMIRGLCMAGEFREACWLLKEMES 422
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+G +PN V Y+ L+ G+L +A ++ E
Sbjct: 423 RGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N +L SL+ K Y + +QM G +P ++T +IL+ + LG+ + +
Sbjct: 222 YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMA 281
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ GF P + T+ L+ L AL + + G + + Y TLI+GL + G
Sbjct: 282 RDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A FL ++ P+VV Y +I + A ++ EM VKG PNV TYN++I
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
Query: 193 YGFCIVGQLKQAIGLLDE 210
G C+ G+ ++A LL E
Sbjct: 402 RGLCMAGEFREACWLLKE 419
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 4/192 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +P +N +L L K A++ M+ GI PS++ + LI+ G
Sbjct: 280 MARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGN 339
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ L ++K G +P + +T +I G + G + +A + + +G N +Y +
Sbjct: 340 LEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I GLC GE A L+++E + PN V+Y+T++ L K +S A + EM+ KG
Sbjct: 400 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Query: 181 ----ISPNVVTY 188
+ P ++ Y
Sbjct: 460 HYVHLVPKMMKY 471
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
A+ + + + GI LV L+ C A ++ + +R F +
Sbjct: 195 DEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMI 253
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
+ G C+ GNVH A +F ++A R + VSYGT+IN L K G+ A+E R +
Sbjct: 254 LNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRR 313
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIG 206
P+V + N +ID+LC + A ++ E+ KG PNVVTYN+L+ C + + ++
Sbjct: 314 NPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWE 373
Query: 207 LLDE 210
L++E
Sbjct: 374 LVEE 377
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 89/208 (42%), Gaps = 11/208 (5%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ + ++ +L K A+ L R M T P + + +I+ C+ + A V
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEV 339
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFR-----LNQVSYGTLI 122
I ++G P +T+ +L+K LC + R + ++V + N V++ L+
Sbjct: 340 FREISEKGPDPNVVTYNSLLKHLC---KIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL 396
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+ + LE + + + ++ +YN + + + ++SEM G+
Sbjct: 397 KYSQRSKDVDIVLERMAKNKCEMTSD---LYNLMFRLYVQWDKEEKVREIWSEMERSGLG 453
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ TY I+G G++ +A+ E
Sbjct: 454 PDQRTYTIRIHGLHTKGKIGEALSYFQE 481
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Query: 9 PIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVL 68
P++ F+ ++ +K + R++ +G + S+VT + L+N L + V
Sbjct: 166 PVV-FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 69 ANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
+ + + G P T TF L C N F + + +GF + V+Y TL++ C+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
G A + + + ++P++V Y ++I LCKD V A + M+ +GI P+ ++Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 189 NALIYGFCIVGQLKQAIGLLDE 210
N LIY +C G ++Q+ LL E
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHE 366
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
GI P+ T +IL N C L + + GF+P +T+ TL+ C RG + A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 100 LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDS 159
+ ++ + + V+Y +LI GLCK G A + ++ + I P+ + YNT+I +
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 160 LCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
CK+ ++ + L EM+ + P+ T ++ GF G+L A+ + E
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVE 401
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ I P FN + ++ +ME G P LVT + L++ +C G+
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYG 119
AF + + +R P +T+T+LIKGLC G V A Q FH +V +G + + +SY
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV-DRGIKPDCMSYN 345
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
TLI CK G + + L ++ G ++P+ I++ ++ + A N E+
Sbjct: 346 TLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRL 405
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ + LI C G+ A LLD
Sbjct: 406 KVDIPFEVCDFLIVSLCQEGKPFAAKHLLD 435
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 40/248 (16%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P ++ +N +++S + A L + M + P LVT + LI C G+
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGR 321
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF-HDV-------------V 106
A ++ RG +P +++ TLI C G + ++ + H++ V
Sbjct: 322 VREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKV 381
Query: 107 LAQGF-----RLNQVSY----------------GTLINGLCKMGETSAALEFLRQI---E 142
+ +GF L+ V++ LI LC+ G+ AA L +I E
Sbjct: 382 IVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEE 441
Query: 143 GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLK 202
G P YN +I+SL + + + A L ++ + + TY ALI C +G+ +
Sbjct: 442 GHEAKPET--YNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNR 499
Query: 203 QAIGLLDE 210
+A L+ E
Sbjct: 500 EAESLMAE 507
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 86/244 (35%), Gaps = 36/244 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + R+ P ++ + ++ L K A +M GI P ++ + LI +C G
Sbjct: 297 MYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGM 356
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF------------------ 102
+ +L +L P T +++G G + A+ F
Sbjct: 357 MQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDF 416
Query: 103 ------------------HDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQ 144
++ +G +Y LI L + AL +++ Q
Sbjct: 417 LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQ 476
Query: 145 LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
+ + Y +I LC+ A +L +EM + P+ AL+YG+C +A
Sbjct: 477 NQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKA 536
Query: 205 IGLL 208
LL
Sbjct: 537 ERLL 540
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 10/212 (4%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+TP FN ++ K A + + ME+ P +VT + +I+ C G+ A
Sbjct: 205 VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAH 264
Query: 66 SVLANILKRG--FQPTTITFTTLIKGLCLRGNVHRA-LQFHDVVLAQGFRLNQVSYGTLI 122
+VL+ +LK+ P +++TTL++G C++ + A L FHD +L++G + N V+Y TLI
Sbjct: 265 NVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD-MLSRGLKPNAVTYNTLI 323
Query: 123 NGLCKMGETSAALEFLRQIEGQ----LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
GL + + L I G P+ +N +I + C + A ++ EM+
Sbjct: 324 KGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 381
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+ +Y+ LI C+ + +A L +E
Sbjct: 382 MKLHPDSASYSVLIRTLCMRNEFDRAETLFNE 413
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLG 59
M QM I+P ++ FN +L+ L+K A L +M T G+TP T + LIN C
Sbjct: 164 MKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVV-----LAQGFRLN 114
AF + ++ P +T+ T+I GLC G V A H+V+ A N
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA---HNVLSGMLKKATDVHPN 280
Query: 115 QVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYS 174
VSY TL+ G C E A+ + + + PN V YNT+I L + +H +
Sbjct: 281 VVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE----AHRYDEIK 336
Query: 175 EMIVKG------ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++++ G +P+ T+N LI C G L A+ + E
Sbjct: 337 DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 378
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 5/186 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN ++ S + ++ L + M+ GI+PS++T + L++ G+T A + +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 73 KR-GFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ G P + TF TLI G C V A + F D+ L + V+Y T+I+GLC+ G+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC-NPDVVTYNTIIDGLCRAGK 259
Query: 131 TSAALEFLRQI--EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
A L + + + PNVV Y T++ C + A ++ +M+ +G+ PN VTY
Sbjct: 260 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 189 NALIYG 194
N LI G
Sbjct: 320 NTLIKG 325
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 10/209 (4%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYS--TAISLSRQMEITGITPSLVTLSILINCHCYL 58
ML + P + +N ++ L + Y I + T P T +ILI HC
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQ--- 115
G +A V +L P + +++ LI+ LC+R RA + + + L +
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 116 ----VSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACN 171
+Y + LC G+T A + RQ+ + + + Y T+I C++ A
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR-GVQDPPSYKTLITGHCREGKFKPAYE 485
Query: 172 LYSEMIVKGISPNVVTYNALIYGFCIVGQ 200
L M+ + P++ TY LI G +G+
Sbjct: 486 LLVLMLRREFVPDLETYELLIDGLLKIGE 514
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 83 FTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIE 142
F +LI+ G +++ + G + +++ +L++ L K G T A + ++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 143 GQL-IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
+ P+ +NT+I+ CK+++V A ++ +M + +P+VVTYN +I G C G++
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 202 KQAIGLL 208
K A +L
Sbjct: 261 KIAHNVL 267
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGI-------TPSLVTLSILIN 53
ML M++ P ++ ++ +L + A +L ++ + P + +
Sbjct: 379 MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE 438
Query: 54 CHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
C G+T A V ++KRG Q ++ TLI G C G A + ++L + F
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGVQDPP-SYKTLITGHCREGKFKPAYELLVLMLRREFVP 497
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
+ +Y LI+GL K+GE A + L+++ +P +++++ L K + + L
Sbjct: 498 DLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLV 557
Query: 174 SEMIVKGISPNV 185
+ M+ K I N+
Sbjct: 558 TLMLEKRIRQNI 569
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 95.5 bits (236), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 110/211 (52%), Gaps = 2/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISL-SRQMEITGITPSLVTLSILINCHCYLG 59
M + + P + +N ++ +K K + TA+ L R +E + + P++ T +I+I+ G
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ + + + + T+++LI GLC GNV +A + + + ++ V+Y
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
T++ G C+ G+ +LE R +E + + N+V YN +I L ++ + A ++ M K
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAK 388
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G + + TY I+G C+ G + +A+G++ E
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419
Score = 93.2 bits (230), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +N +L + V+ K + SL E G+ P+L T ++LI C + A
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + K GF+P +++T+I L G + AL+ D + +G + Y LI+G K
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 128 MGETSAALEFL-RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
+ A+E R +E + PNV +N +I L K V ++ M ++
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TY++LI+G C G + +A + +E
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNE 315
Score = 92.4 bits (228), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 99/197 (50%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N ++ L++ A R+M G P++V+ +ILI C G+ A + + +L+
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
G++P T++ L+ GLC + AL+ L G + + + LI+GLC +G+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A+ + +E + N+V YNT+++ K + A ++ M G+ P++++YN ++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 194 GFCIVGQLKQAIGLLDE 210
G C+ + A+ D+
Sbjct: 648 GLCMCRGVSYAMEFFDD 664
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 32 LSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLC 91
R EI G P++ + + L+N Q S+ A G P T+ LIK C
Sbjct: 101 FKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSC 160
Query: 92 LRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVV 151
+ +A F D + +GF+ + SY T+IN L K G+ ALE ++ + + P+V
Sbjct: 161 KKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT 220
Query: 152 MYNTIIDSLCKDNLVSHACNLYSEMIV-KGISPNVVTYNALIYGFCIVGQLKQAI 205
YN +ID K+ A L+ ++ + PNV T+N +I G G++ +
Sbjct: 221 CYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 86/185 (46%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ +N ++ L K + A + ++M G P L T SIL+ C + A +
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L+ G + + LI GLC G + A+ + + N V+Y TL+ G K
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+G+++ A + + P+++ YNTI+ LC VS+A + + GI P V T
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYT 676
Query: 188 YNALI 192
+N L+
Sbjct: 677 WNILV 681
Score = 78.2 bits (191), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ +N +L + ++ L R ME + ++V+ +ILI G+ A +
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ +G+ T+ I GLC+ G V++AL V + G L+ +Y ++I+ LCK
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A ++++ + N + N +I L +D+ + A EM G P VV+YN
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
LI G C G+ +A + E
Sbjct: 504 ILICGLCKAGKFGEASAFVKE 524
Score = 72.0 bits (175), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 74/187 (39%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I+ +N ++ L++ A + R M G T I I+ C G A V+
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ G + ++I LC + + A + G LN LI GL +
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A FLR++ P VV YN +I LCK A EM+ G P++ TY+
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 190 ALIYGFC 196
L+ G C
Sbjct: 539 ILLCGLC 545
Score = 70.5 bits (171), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 78/160 (48%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ P + ++ +L L + + A+ L Q +G+ ++ +ILI+ C +G+
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +V+AN+ R +T+ TL++G G+ +RA + G + + +SY T
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNT 644
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
++ GLC S A+EF I P V +N ++ ++
Sbjct: 645 IMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ +N ++ KT + L +M GI+P + T +ILI+ G A +++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+++RGF P+T+ FT +I G RG+ A + + + V+ L++G CK
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A+ ++ + P+VV+YNT+I C + AC L M+ +G+ PN T++
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 190 ALIYG 194
AL+ G
Sbjct: 658 ALVLG 662
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
R+ P I ++ L+++ T A ++ +++ G+ P V + +I+ +C LG+T
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLR-GNVHRALQFHDVVLAQGFRLNQVSYGTL 121
AF +LK G P ++T +T++ G C R G++ A + +G +L+ V+Y L
Sbjct: 426 KAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
++G K + + E + ++ I P+V YN +I S+ + A + SE+I +G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 182 SPNVVTYNALIYGFCIVGQLKQAI 205
P+ + + +I GF G ++A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAF 568
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
S A S+ R M+ G+ +VT + L++ + Q F ++ + G P T+ L
Sbjct: 460 SDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
I + +RG + A + ++ +GF + +++ +I G K G+ A + +
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRM 579
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA-- 204
P+VV + ++ CK + A L+++++ G+ P+VV YN LI+G+C VG +++A
Sbjct: 580 KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACE 639
Query: 205 -IGLL 208
IGL+
Sbjct: 640 LIGLM 644
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%)
Query: 41 ITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRAL 100
+ P++ S ++ C G A ++ I + G P + +TT+I G C G +A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 101 QFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
Q+ +L G + + LI + G S A R ++ + + +VV YN ++
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 161 CKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
K + ++ L EM GISP+V TYN LI+ + G + +A ++ E
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 48 LSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVL 107
LS+ I +C G + +L + G +P + FT I LC G + A +
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 108 AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVS 167
G + VS ++I+G CK+G+ A++ + + PN+ +Y++ + ++C +
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDML 390
Query: 168 HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
A ++ E+ G+ P+ V Y +I G+C +G+ +A
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 45/230 (19%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
F+K L+ KHY GI P +V ++ I+ C G A SVL +
Sbjct: 287 FDKGWELLMGMKHY-------------GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 73 KRG--------------------------------FQPTTITFTTLIKGLCLRGNVHRAL 100
G +P +++ + +C G++ RA
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 101 QFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
+ G + V Y T+I+G C +G T A ++ + P++ +I +
Sbjct: 394 TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGAC 453
Query: 161 CKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ +S A +++ M +G+ +VVTYN L++G+ QL + L+DE
Sbjct: 454 SRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDE 503
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%)
Query: 48 LSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVL 107
SILI+C + A + + + G P+ +L+K + + A +F + +L
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 108 AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVS 167
++G LN I C G E L ++ I P++V + ID LCK +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 168 HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
A ++ ++ + GIS + V+ +++I GFC VG+ ++AI L+
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+++ P + F V+ K + A L M + P +VT S L++ +C +
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +L G +P + + TLI G C G++ +A + +++ +G N+ ++
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHA 658
Query: 121 LINGL 125
L+ GL
Sbjct: 659 LVLGL 663
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ +N ++ KT + L +M GI+P + T +ILI+ G A +++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+++RGF P+T+ FT +I G RG+ A + + + V+ L++G CK
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A+ ++ + P+VV+YNT+I C + AC L M+ +G+ PN T++
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 190 ALIYG 194
AL+ G
Sbjct: 658 ALVLG 662
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
R+ P I ++ L+++ T A ++ +++ G+ P V + +I+ +C LG+T
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLR-GNVHRALQFHDVVLAQGFRLNQVSYGTL 121
AF +LK G P ++T +T++ G C R G++ A + +G +L+ V+Y L
Sbjct: 426 KAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
++G K + + E + ++ I P+V YN +I S+ + A + SE+I +G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 182 SPNVVTYNALIYGFCIVGQLKQAI 205
P+ + + +I GF G ++A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAF 568
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
S A S+ R M+ G+ +VT + L++ + Q F ++ + G P T+ L
Sbjct: 460 SDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
I + +RG + A + ++ +GF + +++ +I G K G+ A + +
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRM 579
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA-- 204
P+VV + ++ CK + A L+++++ G+ P+VV YN LI+G+C VG +++A
Sbjct: 580 KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACE 639
Query: 205 -IGLL 208
IGL+
Sbjct: 640 LIGLM 644
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%)
Query: 41 ITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRAL 100
+ P++ S ++ C G A ++ I + G P + +TT+I G C G +A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 101 QFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
Q+ +L G + + LI + G S A R ++ + + +VV YN ++
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 161 CKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
K + ++ L EM GISP+V TYN LI+ + G + +A ++ E
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 48 LSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVL 107
LS+ I +C G + +L + G +P + FT I LC G + A +
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 108 AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVS 167
G + VS ++I+G CK+G+ A++ + + PN+ +Y++ + ++C +
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDML 390
Query: 168 HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
A ++ E+ G+ P+ V Y +I G+C +G+ +A
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 45/230 (19%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
F+K L+ KHY GI P +V ++ I+ C G A SVL +
Sbjct: 287 FDKGWELLMGMKHY-------------GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 73 KRG--------------------------------FQPTTITFTTLIKGLCLRGNVHRAL 100
G +P +++ + +C G++ RA
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 101 QFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
+ G + V Y T+I+G C +G T A ++ + P++ +I +
Sbjct: 394 TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGAC 453
Query: 161 CKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ +S A +++ M +G+ +VVTYN L++G+ QL + L+DE
Sbjct: 454 SRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDE 503
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%)
Query: 48 LSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVL 107
SILI+C + A + + + G P+ +L+K + + A +F + +L
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 108 AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVS 167
++G LN I C G E L ++ I P++V + ID LCK +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 168 HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
A ++ ++ + GIS + V+ +++I GFC VG+ ++AI L+
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+++ P + F V+ K + A L M + P +VT S L++ +C +
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +L G +P + + TLI G C G++ +A + +++ +G N+ ++
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHA 658
Query: 121 LINGL 125
L+ GL
Sbjct: 659 LVLGL 663
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q + P ++ +N +L + + +SL + M G+ ++ S L+ LG
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGD 486
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV--SY 118
A + N+L RG TIT +I GLC V+ A + D V FR +Y
Sbjct: 487 FNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV--NIFRCKPAVQTY 544
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
L +G K+G A +E + I P + MYNT+I K ++ +L E+
Sbjct: 545 QALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRA 604
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQA 204
+G++P V TY ALI G+C +G + +A
Sbjct: 605 RGLTPTVATYGALITGWCNIGMIDKA 630
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 107/211 (50%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLG 59
M+ ++P + + V+ + ++ + A+ +++ E + G+ ++VT + LIN + +G
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
VL + +RG +T+T+LIKG C +G + A +++ + +Q YG
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
L++G C+ G+ A+ + + N + N++I+ CK + A ++S M
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+ TYN L+ G+C G + +A+ L D+
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQ 426
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Query: 18 TSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG-F 76
T+ +KT+ + ++ S ++ + P+ + ++ I C G+ A + +++L F
Sbjct: 694 TTCLKTQKIAESVENSTPKKL--LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 751
Query: 77 QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALE 136
P T+T LI G + G++++A D + +G N V+Y LI GLCK+G A
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR 811
Query: 137 FLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
L ++ + I PN + YNT+ID L K V+ A L +MI KG+
Sbjct: 812 LLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N ++ K+ A + +M + P T + L++ +C G A + + +
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
+ PT +T+ L+KG G H L ++L +G +++S TL+ L K+G+ +
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNE 489
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A++ + + ++ + + N +I LCK V+ A + + + P V TY AL +
Sbjct: 490 AMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSH 549
Query: 194 GFCIVGQLKQAIGL 207
G+ VG LK+A +
Sbjct: 550 GYYKVGNLKEAFAV 563
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKR--GFQPTTITFTTL 86
A+ + QM ++P + T SI++N +C G A V A + G + +T+ +L
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSL 267
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
I G + G+V + ++ +G N V+Y +LI G CK G A ++ + +
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL 327
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
+ + MY ++D C+ + A ++ MI G+ N N+LI G+C GQL +A
Sbjct: 328 VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLI 122
A SV + K+ P I + I GLC G + A + F D++ + F ++ +Y LI
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+G G+ + A ++ + IIPN+V YN +I LCK V A L ++ KGI+
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN +TYN LI G G + +A+ L ++
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEK 850
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF-HDVVLAQGFRLNQVS 117
G+ A V ++ P T + ++ C GNV +A+ F + + G LN V+
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
Y +LING +G+ LR + + + NVV Y ++I CK L+ A +++ +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
K + + Y L+ G+C GQ++ A+ + D
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHD 355
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%)
Query: 22 KTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTI 81
+T A+ + M G+ + + LIN +C GQ A + + + +P
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 82 TFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQI 141
T+ TL+ G C G V AL+ D + + ++Y L+ G ++G L + +
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 142 EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
+ + + + +T++++L K + A L+ ++ +G+ + +T N +I G C + ++
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 202 KQAIGLLD 209
+A +LD
Sbjct: 523 NEAKEILD 530
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 93/238 (39%), Gaps = 38/238 (15%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
I N +++ L K + + A + + I P++ T L + + +G AF+V
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY 566
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ ++G PT + TLI G ++++ + A+G +YG LI G C +G
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI------------- 177
A ++ + I NV + + I +SL + + + AC L +++
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 178 -------------------------VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
K + PN + YN I G C G+L+ A L +
Sbjct: 687 EFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSD 744
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 4/213 (1%)
Query: 2 LQMRIT---PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYL 58
LQ++ T P + +N +L + K+ L ++M + +T +I+I+
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 59 GQTTSAFSVLANIL-KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS 117
G A + +++ R F PT T+ LI GL G ++ A Q + +L G R N
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
Y LING K GE AA +++ + + P++ Y+ ++D LC V + + E+
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G++P+VV YN +I G +L++A+ L +E
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 1/205 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +P + ++ L K+ A L M G P+ +ILIN G+
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A ++ ++K G +P T++ L+ LC+ G V L + + G + V Y
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 121 LINGLCKMGETSAALEFLRQIE-GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+INGL K AL +++ + I P++ YN++I +L +V A +Y+E+
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 180 GISPNVVTYNALIYGFCIVGQLKQA 204
G+ PNV T+NALI G+ + G+ + A
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHA 1086
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+ + P + +N ++ L++ A + Q++ TG P + T + L++ + G+
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTL 121
F + + + TIT +I GL GNV AL ++D++ + F +YG L
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I+GL K G A + + PN +YN +I+ K AC L+ M+ +G+
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P++ TY+ L+ C+VG++ + + E
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + ++ ++ L K + + + L ++ME G+ P++ T +I I G+ A+ +
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + G P +T+T LI LC + A + + + + ++V+Y TL++
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ + +F ++E +P+VV + ++D+LCK A + M +GI PN+ T
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 188 YNALIYGFCIVGQLKQAIGLL 208
YN LI G V +L A+ L
Sbjct: 401 YNTLICGLLRVHRLDDALELF 421
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQ-MEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I N V++ LVK + A+ L M +P+ T LI+ G+ A +
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+L G +P + LI G G A ++ +G R + +Y L++ LC +G
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV-KGISPNVVTY 188
L + ++++ + P+VV YN II+ L K + + A L++EM +GI+P++ TY
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 189 NALIYGFCIVGQLKQAIGLLDE 210
N+LI I G +++A + +E
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNE 1057
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
R P + + +L + + +ME G P +VT +IL++ C G A
Sbjct: 323 RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
F L + +G P T+ TLI GL + AL+ + + G + +Y I+
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
K G++ +ALE +++ + I PN+V N + SL K A ++ + G+ P+
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
VTYN ++ + VG++ +AI LL E
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSE 528
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P + +N ++ K AI L +M G P ++ ++ LIN + A+
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ + + +PT +T+ TL+ GL G + A++ + ++ +G N +++ TL + L
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
CK E + AL+ L ++ +P+V YNTII L K+ V A + +M K + P+
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDF 677
Query: 186 VTYNALIYG 194
VT L+ G
Sbjct: 678 VTLCTLLPG 686
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M I P + +N ++ L++ A+ L ME G+ P+ T + I+ + G
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ SA + +G P + + L G A Q + G + V+Y
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++ K+GE A++ L ++ P+V++ N++I++L K + V A ++ M
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ P VVTYN L+ G G++++AI L +
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N ++ L+K++ + A+ + R+M + G PSL T S L+ S +L +
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
G +P TFT I+ L G ++ A + + +G + V+Y LI+ LC +
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A E +++ P+ V Y T++D + + +SEM G P+VVT+ L+
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 193 YGFCIVGQLKQAIGLLD 209
C G +A LD
Sbjct: 371 DALCKAGNFGEAFDTLD 387
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 7/195 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML P +N ++ K A +L ++M G+ P L T S+L++C C +G+
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ----FHDVVLAQGFRLNQV 116
+ + G P + + +I GL G HR + F+++ ++G +
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGL---GKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+Y +LI L G A + +I+ + PNV +N +I HA +Y M
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 177 IVKGISPNVVTYNAL 191
+ G SPN TY L
Sbjct: 1094 VTGGFSPNTGTYEQL 1108
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + F + L + + A + ++M+ G P +VT ++LI+ C +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V + +P +T+ TL+ ++ QF + G + V++
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++ LCK G A + L + Q I+PN+ YNT+I L + + + A L+ M G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 181 ISPNVVTY 188
+ P TY
Sbjct: 429 VKPTAYTY 436
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%)
Query: 22 KTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTI 81
K+ +A+ +M+ GI P++V + + G+ A + + G P ++
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 82 TFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQI 141
T+ ++K G + A++ ++ G + + +LIN L K A + ++
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 142 EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
+ + P VV YNT++ L K+ + A L+ M+ KG PN +T+N L C ++
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 202 KQAIGLL 208
A+ +L
Sbjct: 625 TLALKML 631
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ F ++ +L K ++ A M GI P+L T + LI + + A +
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
N+ G +PT T+ I G+ AL+ + + +G N V+ + L K
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A + ++ ++P+ V YN ++ K + A L SEM+ G P+V+
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 188 YNALI 192
N+LI
Sbjct: 541 VNSLI 545
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 90/245 (36%), Gaps = 39/245 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ M P + +N ++ LVK A+ QM+ + P VTL L+
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASL 692
Query: 61 TTSAFSVLANILKR-GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGF-------- 111
A+ ++ N L QP + + LI + + A+ F + ++A G
Sbjct: 693 IEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSIL 752
Query: 112 --------RLNQVS---------------------YGTLINGLCKMGETSAALEFLRQIE 142
+ N VS Y LI GL + A + Q++
Sbjct: 753 VPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 812
Query: 143 GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLK 202
IP+V YN ++D+ K + LY EM N +T+N +I G G +
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 203 QAIGL 207
A+ L
Sbjct: 873 DALDL 877
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 94/232 (40%), Gaps = 39/232 (16%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +M++ P ++ +N +L L K AI L M G P+ +T + L +C C +
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFH---------DVV----L 107
T A +L ++ G P T+ T+I GL G V A+ F D V L
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTL 683
Query: 108 AQGF---RLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI----IPNVVMYNT----- 155
G L + +Y + N L + A L F + G ++ I N V ++
Sbjct: 684 LPGVVKASLIEDAYKIITNFLYNCADQPANL-FWEDLIGSILAEAGIDNAVSFSERLVAN 742
Query: 156 ------------IIDSLCKDNLVSHACNLYSEMIVK-GISPNVVTYNALIYG 194
II CK N VS A L+ + G+ P + TYN LI G
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLGQTTSA 64
+ P ++ +N ++ L K+ A+ L +M+ + GITP L T + LI G A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
+ I + G +P TF LI+G L G A + ++ GF N +Y L N
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%)
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
G A L + + GF ++ LI L A++ + ++ +GFR + +Y
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
+L+ GL K + + + L+++E + PNV + I L + ++ A + M
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQA 204
+G P+VVTY LI C +L A
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCA 312
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%)
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
KR + T T+ T+ K L ++G + +A + GF LN SY LI+ L K +
Sbjct: 146 KRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCT 205
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A+E R++ + P++ Y++++ L K + L EM G+ PNV T+ I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 193 YGFCIVGQLKQAIGLL 208
G++ +A +L
Sbjct: 266 RVLGRAGKINEAYEIL 281
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Query: 60 QTTSAFSVLANILKR-GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
T S+FS ++ TT T +++ L + G + D++ + + + +Y
Sbjct: 97 DTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTY 156
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
T+ L G A LR++ + N YN +I L K + A +Y MI+
Sbjct: 157 LTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMIL 216
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+G P++ TY++L+ G + +GLL E
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 94.7 bits (234), Expect = 4e-20, Method: Composition-based stats.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
PP FN +L+ L + S L +M+ I P +VTL ILIN C + A V
Sbjct: 295 PP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 68 LANILKRG--------FQPTTITFTTLIKGLCLRGNVHRALQFH-DVVLAQGFRLNQVSY 118
+ RG + +I F TLI GLC G + A + + L + N V+Y
Sbjct: 352 FEKM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTY 409
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
LI+G C+ G+ A E + +++ I PNVV NTI+ +C+ + ++ A + +M
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAI 205
+G+ NVVTY LI+ C V +++A+
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAM 496
Score = 90.5 bits (223), Expect = 8e-19, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 93/210 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P ++ N ++ + + + A+ ME G+ ++VT LI+ C +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L+ G P + LI GLC H A++ + + GF L+ ++Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI C T E L +E + P+ + YNT+I K + +M G
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P V TY A+I +C VG+L +A+ L +
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQM------EITGITPSLVTLSILINC 54
M +++I P ++ ++ +L K++ A+ + +M + I + + LI+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 55 HCYLGQTTSAFSVLANI-LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
C +G+ A +L + L+ P +T+ LI G C G + A + + +
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
N V+ T++ G+C+ + A+ F +E + + NVV Y T+I + C + V A Y
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+M+ G SP+ Y ALI G C V + AI ++++
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/194 (23%), Positives = 91/194 (46%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ R P + +N ++ + TA + +M+ I P++VT++ ++ C
Sbjct: 398 LEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A ++ K G + +T+ TLI C NV +A+ +++ +L G + Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I+GLC++ A+ + +++ +++ YN +I C N + ++M +G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK 577
Query: 182 SPNVVTYNALIYGF 195
P+ +TYN LI F
Sbjct: 578 KPDSITYNTLISFF 591
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITG-ITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I FN ++ L K A L +M++ P+ VT + LI+ +C G+ +A V++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ + +P +T T++ G+C ++ A+ F + +G + N V+Y TLI+ C +
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A+ + ++ P+ +Y +I LC+ A + ++ G S +++ YN
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 190 ALIYGFC 196
LI FC
Sbjct: 551 MLIGLFC 557
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 92/228 (40%), Gaps = 36/228 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ +P + +++ L + + AI + +++ G + L+ ++LI C
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIK---------------------GL--------- 90
T + +L ++ K G +P +IT+ TLI GL
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 91 -----CLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQ 144
C G + AL+ F D+ L N V Y LIN K+G AL +++ +
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 145 LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
++ PNV YN + L + L EM+ + PN +T L+
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +N +++ K K + + + QM G+ P++ T +I+ +C +G+ A +
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 68 LANI-LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
++ L P T+ + LI GN +AL + + + R N +Y L L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC-KDNLV 166
+ + L+ + ++ Q PN + +++ L D LV
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELV 739
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 43 PSLVTLSILINCHCYLGQTTSAFSVLANILK---RGFQPTTITFTTLIKGLCLRGNVHRA 99
P+ +T I+++ + G+ + ++A I + G P ++ T I LC + A
Sbjct: 220 PNRITADIVLH-EVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAA 278
Query: 100 LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDS 159
++ L + L++ L + + S + + +++ I P+VV +I++
Sbjct: 279 WDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINT 338
Query: 160 LCKDNLVSHACNLYSEMIVKG------ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
LCK V A ++ +M K I + + +N LI G C VG+LK+A LL
Sbjct: 339 LCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 94.7 bits (234), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 2/207 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ N VL++ + YS A+S M+ + P T +I+I C LGQ++ A
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 66 SVLANILKRGFQ--PTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
+ ++ ++ + P +TFT+++ ++G + + ++A+G + N VSY L+
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 363
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
G + AL L I+ IIP+VV Y +++S + A ++ M + P
Sbjct: 364 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 423
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLLDE 210
NVVTYNALI + G L +A+ + +
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 99/195 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + R P ++ +N ++ + + A+ + RQME GI P++V++ L+ +
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ +VL+ RG T + + I + +A+ + + + + + V++
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G C+M + A+ +L+++E I +Y++++ + K V+ A +++++M + G
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 181 ISPNVVTYNALIYGF 195
P+V+ Y ++++ +
Sbjct: 596 CEPDVIAYTSMLHAY 610
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 89/210 (42%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P I+ +N ++ + TA+S+ ++ GI P +V+ + L+N + Q
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V + K +P +T+ LI G + A++ + G + N VS T
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 465
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ + + L + + I N YN+ I S + A LY M K
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 525
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + VT+ LI G C + + +AI L E
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKE 555
Score = 63.9 bits (154), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P ++ ++ + + + A++L M I PS T + LIN G
Sbjct: 169 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V + G P +T ++ +AL + +++ R + ++
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 121 LINGLCKMGETSAALEFLRQIEGQL--IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
+I L K+G++S AL+ + + P+VV + +I+ + + ++ M+
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+G+ PN+V+YNAL+ + + G A+ +L +
Sbjct: 349 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 380
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 67/161 (41%)
Query: 49 SILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLA 108
+++I H A + + K +P T+ LI G A+ D +L
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 109 QGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSH 168
++ +Y LIN G ALE +++ + P++V +N ++ + S
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 169 ACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
A + + M + P+ T+N +IY +GQ QA+ L +
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 94.4 bits (233), Expect = 6e-20, Method: Composition-based stats.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
PP FN +L+ L + S L +M+ I P +VTL ILIN C + A V
Sbjct: 295 PP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 68 LANILKRG--------FQPTTITFTTLIKGLCLRGNVHRALQFH-DVVLAQGFRLNQVSY 118
+ RG + +I F TLI GLC G + A + + L + N V+Y
Sbjct: 352 FEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTY 409
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
LI+G C+ G+ A E + +++ I PNVV NTI+ +C+ + ++ A + +M
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAI 205
+G+ NVVTY LI+ C V +++A+
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAM 496
Score = 88.6 bits (218), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 92/210 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P ++ N ++ + + + A+ ME G+ ++VT LI+ C +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L+ G P + LI GLC H A++ + + GF L+ ++Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI C E L +E + P+ + YNT+I K + +M G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P V TY A+I +C VG+L +A+ L +
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Score = 80.5 bits (197), Expect = 7e-16, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQM------EITGITPSLVTLSILINC 54
M +++I P ++ ++ +L K++ A+ + QM + I + + LI+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 55 HCYLGQTTSAFSVLANI-LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
C +G+ A +L + L+ P +T+ LI G C G + A + + +
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
N V+ T++ G+C+ + A+ F +E + + NVV Y T+I + C + V A Y
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+M+ G SP+ Y ALI G C V + AI ++++
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/194 (23%), Positives = 91/194 (46%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ R P + +N ++ + TA + +M+ I P++VT++ ++ C
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A ++ K G + +T+ TLI C NV +A+ +++ +L G + Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I+GLC++ A+ + +++ +++ YN +I C N + ++M +G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 182 SPNVVTYNALIYGF 195
P+ +TYN LI F
Sbjct: 578 KPDSITYNTLISFF 591
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITG-ITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I FN ++ L K A L +M++ P+ VT + LI+ +C G+ +A V++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ + +P +T T++ G+C ++ A+ F + +G + N V+Y TLI+ C +
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A+ + ++ P+ +Y +I LC+ A + ++ G S +++ YN
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 190 ALIYGFC 196
LI FC
Sbjct: 551 MLIGLFC 557
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 1/184 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ +N ++ + + ME G P +T + LI+ S ++
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLINGLCKM 128
+ + G PT T+ +I C G + AL+ F D+ L N V Y LIN K+
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
G AL +++ +++ PNV YN + L + L EM+ + PN +T
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
Query: 189 NALI 192
L+
Sbjct: 726 EILM 729
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +N +++ K K + + + QM G+ P++ T +I+ +C +G+ A +
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 68 LANI-LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
++ L P T+ + LI GN +AL + + + R N +Y L L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC-KDNLV 166
+ + L+ + ++ Q PN + +++ L D LV
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELV 739
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++++ G P ++ T I LC + A ++ L + L++ L
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG----- 180
+ + S + + +++ I P+VV +I++LCK V A ++ +M K
Sbjct: 305 GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGN 364
Query: 181 -ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
I + + +N LI G C VG+LK+A LL
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELL 393
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 94.0 bits (232), Expect = 6e-20, Method: Composition-based stats.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
PP FN +L+ L + S L +M+ I P +VTL ILIN C + A V
Sbjct: 295 PP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 68 LANILKRG--------FQPTTITFTTLIKGLCLRGNVHRALQFH-DVVLAQGFRLNQVSY 118
+ RG + +I F TLI GLC G + A + + L + N V+Y
Sbjct: 352 FEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTY 409
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
LI+G C+ G+ A E + +++ I PNVV NTI+ +C+ + ++ A + +M
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAI 205
+G+ NVVTY LI+ C V +++A+
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAM 496
Score = 88.2 bits (217), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 92/210 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P ++ N ++ + + + A+ ME G+ ++VT LI+ C +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L+ G P + LI GLC H A++ + + GF L+ ++Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI C E L +E + P+ + YNT+I K + +M G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P V TY A+I +C VG+L +A+ L +
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Score = 80.9 bits (198), Expect = 6e-16, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ +P + +++ L + + AI + +++ G + L+ ++LI C
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ +L ++ K G +P +IT+ TLI + + + + G +YG
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 121 LINGLCKMGETSAALEFLRQIE-GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+I+ C +GE AL+ + + + PN V+YN +I++ K A +L EM +K
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ PNV TYNAL Q + + L+DE
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Score = 80.5 bits (197), Expect = 7e-16, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQM------EITGITPSLVTLSILINC 54
M +++I P ++ ++ +L K++ A+ + QM + I + + LI+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 55 HCYLGQTTSAFSVLANI-LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
C +G+ A +L + L+ P +T+ LI G C G + A + + +
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
N V+ T++ G+C+ + A+ F +E + + NVV Y T+I + C + V A Y
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+M+ G SP+ Y ALI G C V + AI ++++
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/194 (23%), Positives = 91/194 (46%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ R P + +N ++ + TA + +M+ I P++VT++ ++ C
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A ++ K G + +T+ TLI C NV +A+ +++ +L G + Y L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I+GLC++ A+ + +++ +++ YN +I C N + ++M +G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 182 SPNVVTYNALIYGF 195
P+ +TYN LI F
Sbjct: 578 KPDSITYNTLISFF 591
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITG-ITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I FN ++ L K A L +M++ P+ VT + LI+ +C G+ +A V++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ + +P +T T++ G+C ++ A+ F + +G + N V+Y TLI+ C +
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A+ + ++ P+ +Y +I LC+ A + ++ G S +++ YN
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 190 ALIYGFC 196
LI FC
Sbjct: 551 MLIGLFC 557
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 1/169 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ +N ++ + + ME G P +T + LI+ S ++
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLINGLCKM 128
+ + G PT T+ +I C G + AL+ F D+ L N V Y LIN K+
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
G AL +++ +++ PNV YN + L + L EM+
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++++ G P ++ T I LC + A ++ L + L++ L
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG----- 180
+ + S + + +++ I P+VV +I++LCK V A ++ +M K
Sbjct: 305 GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGN 364
Query: 181 -ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
I + + +N LI G C VG+LK+A LL
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Score = 50.1 bits (118), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +N +++ K K + + + QM G+ P++ T +I+ +C +G+ A +
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 68 LANI-LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
++ L P T+ + LI GN +AL + + + R N +Y L L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 127 KMGETSAALEFLRQIEGQLI 146
+ + L+ + ++ L+
Sbjct: 699 EKTQGETLLKLMDEMVEHLV 718
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 94.0 bits (232), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 2/207 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ N VL++ + YS A+S M+ + P T +I+I C LGQ++ A
Sbjct: 112 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 171
Query: 66 SVLANILKRGFQ--PTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
+ ++ ++ + P +TFT+++ ++G + + ++A+G + N VSY L+
Sbjct: 172 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 231
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
G + AL L I+ IIP+VV Y +++S + A ++ M + P
Sbjct: 232 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 291
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLLDE 210
NVVTYNALI + G L +A+ + +
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQ 318
Score = 77.4 bits (189), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 99/195 (50%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + R P ++ +N ++ + + A+ + RQME GI P++V++ L+ +
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ +VL+ RG T + + I + +A+ + + + + + V++
Sbjct: 344 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G C+M + A+ +L+++E I +Y++++ + K V+ A +++++M + G
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Query: 181 ISPNVVTYNALIYGF 195
P+V+ Y ++++ +
Sbjct: 464 CEPDVIAYTSMLHAY 478
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 89/210 (42%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P I+ +N ++ + TA+S+ ++ GI P +V+ + L+N + Q
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V + K +P +T+ LI G + A++ + G + N VS T
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 333
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ + + L + + I N YN+ I S + A LY M K
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 393
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + VT+ LI G C + + +AI L E
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKE 423
Score = 63.5 bits (153), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P ++ ++ + + + A++L M I PS T + LIN G
Sbjct: 37 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 96
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V + G P +T ++ +AL + +++ R + ++
Sbjct: 97 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 156
Query: 121 LINGLCKMGETSAALEFLRQIEGQL--IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
+I L K+G++S AL+ + + P+VV + +I+ + + ++ M+
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+G+ PN+V+YNAL+ + + G A+ +L +
Sbjct: 217 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 248
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 67/161 (41%)
Query: 49 SILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLA 108
+++I H A + + K +P T+ LI G A+ D +L
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 74
Query: 109 QGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSH 168
++ +Y LIN G ALE +++ + P++V +N ++ + S
Sbjct: 75 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 134
Query: 169 ACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
A + + M + P+ T+N +IY +GQ QA+ L +
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ R P +I + ++ + S A + ++M++ GI P++ T SI+I+ C GQ
Sbjct: 247 LKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+ A V A++L G P ITF L++ G + LQ ++ + G + ++Y L
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I C+ A++ L + + N +NTI + K V+ A +YS+M+
Sbjct: 367 IEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC 426
Query: 182 SPNVVTYNALIYGF 195
PN VTYN L+ F
Sbjct: 427 EPNTVTYNILMRMF 440
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N+++ K + + A L M+ + S+ T +ILI + G + A +
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
G P I F+ +I L + A F D L F + + Y L+ G C+ GE S
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A + ++++ I PNV Y+ +ID+LC+ +S A +++++M+ G +PN +T+N L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 193 YGFCIVGQLKQAIGLLDE 210
G+ ++ + + ++
Sbjct: 333 RVHVKAGRTEKVLQVYNQ 350
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
S A+ +ME G P + SI+I+ + + A S + LK F+P I +T L
Sbjct: 203 SEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNL 261
Query: 87 IKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
++G C G + A + F ++ LA G N +Y +I+ LC+ G+ S A + +
Sbjct: 262 VRGWCRAGEISEAEKVFKEMKLA-GIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG 320
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
PN + +N ++ K +Y++M G P+ +TYN LI C L+ A+
Sbjct: 321 CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAV 380
Query: 206 GLLD 209
+L+
Sbjct: 381 KVLN 384
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML P I FN ++ VK + + QM+ G P +T + LI HC
Sbjct: 316 MLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN 375
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A VL ++K+ + TF T+ + + + +V+ A + + ++ N V+Y
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI-VK 179
L+ T L+ ++++ + + PNV Y ++ C ++A L+ EM+ K
Sbjct: 436 LMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK 495
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++P++ Y ++ GQLK+ L+++
Sbjct: 496 CLTPSLSLYEMVLAQLRRAGQLKKHEELVEK 526
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 96/198 (48%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N V+ VK+ A+ ++M P + T +ILIN +C + A + +
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
++G +P ++F TLI+G G + ++ ++ G R ++ + L++GLC+ G
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A + + + ++P+ Y ++++ LC +N A + E+ KG +P + L+
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 193 YGFCIVGQLKQAIGLLDE 210
G G+ ++A G +++
Sbjct: 376 EGLRKSGRTEKASGFMEK 393
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + P ++ FN ++ + + + ++ +M G S T IL++ C G+
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ ++L + P+ + +L++ LC RA++ + + +G ++ T
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ GL K G T A F+ ++ I+P+ V +N ++ LC + + A L KG
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ TY+ L+ GF G+ K+ L++E
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNE 463
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + R P + FN ++ ++ + A+ L R+M+ G P++V+ + LI G+
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ +++ G + + T L+ GLC G V A +L + ++ YG+
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ LC + A+E + ++ + P + T+++ L K A +M+ G
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 181 ISPNVVTYNALIYGFC 196
I P+ VT+N L+ C
Sbjct: 399 ILPDSVTFNLLLRDLC 414
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%)
Query: 77 QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALE 136
+P + T++ G G++ +AL+F+ + + + + ++ LING C+ + AL+
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 137 FLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFC 196
R+++ + PNVV +NT+I + + EMI G + T L+ G C
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 197 IVGQLKQAIGLL 208
G++ A GL+
Sbjct: 310 REGRVDDACGLV 321
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 73/160 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+L R+ P ++ ++ L A+ + ++ G TP + + L+ G+
Sbjct: 324 LLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGR 383
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
T A + ++ G P ++TF L++ LC + A + + ++G+ ++ +Y
Sbjct: 384 TEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV 443
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
L++G K G + ++ + ++P++ YN ++D L
Sbjct: 444 LVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 109/210 (51%), Gaps = 3/210 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ +T ++ +N ++ L K K AI + +M TG P+ T S+L+N GQ
Sbjct: 296 MITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
V+ I KR T ++ L++ L G+V A + + + + + SY +
Sbjct: 356 LVRLDGVV-EISKRYM--TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMS 412
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++ LC G+T A+E L +I + ++ + +MYNT+ +L K +SH +L+ +M G
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG 472
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
SP++ TYN LI F VG++ +AI + +E
Sbjct: 473 PSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N V ++L K K S L +M+ G +P + T +ILI +G+ A ++ +
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ +P I++ +LI L G+V A + +G + V+Y TL+ K
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
A ++ + PN+V YN ++D L K+ + A +LYS+M +G++P+ +TY L
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
AI + ++ G+ + + + + L Q + + + K G P T+ LI
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
G V A+ + + + + +SY +LIN L K G+ A ++++ + + P
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNP 545
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGL 207
+VV Y+T+++ K V A +L+ EM+VKG PN+VTYN L+ G+ +A+ L
Sbjct: 546 DVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL 604
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
++ ++ +L K H S A L M + + ++ C G+T A +L+ I
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDV---VLAQGFRLNQVSYGTLINGLCKMG 129
++G T+ + T+ L G + + HD+ + G + +Y LI ++G
Sbjct: 435 EKGVVTDTMMYNTVFSAL---GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
E A+ ++E P+++ YN++I+ L K+ V A + EM KG++P+VVTY+
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
L+ F +++ A L +E
Sbjct: 552 TLMECFGKTERVEMAYSLFEE 572
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+P I +N ++ S + AI++ ++E + P +++ + LINC G A
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ ++G P +T++TL++ V A + +L +G + N V+Y L++ L
Sbjct: 534 RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLE 593
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHA 169
K G T+ A++ +++ Q + P+ + Y T+++ L VSH
Sbjct: 594 KNGRTAEAVDLYSKMKQQGLTPDSITY-TVLERL---QSVSHG 632
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 3/163 (1%)
Query: 47 TLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVV 106
T L+ + + AF V I + G + + L+ L +A Q + +
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL---AKDEKACQVFEDM 261
Query: 107 LAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLV 166
+ R ++ +Y +I + ++G+ A+ ++ + + NVV YNT++ L K +V
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 167 SHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
A ++S M+ G PN TY+ L+ GQL + G+++
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE 364
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P ++ ++ ++ KT+ A SL +M + G P++VT +IL++C G+
Sbjct: 538 MQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGR 597
Query: 61 TTSAFSVLANILKRGFQPTTITFTTL 86
T A + + + ++G P +IT+T L
Sbjct: 598 TAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 89.7 bits (221), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P I +N +L++ + + A+ + ME P L T + +I+ + G A
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ + +GF P +T+ +L+ N + + + + GF ++++Y T+I+
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 126 CKMGETSAALEFLRQIEG-QLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
K G+ AL+ + ++G P+ + Y +IDSL K N A L SEM+ GI P
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 185 VVTYNALIYGFCIVGQLKQA 204
+ TY+ALI G+ G+ ++A
Sbjct: 473 LQTYSALICGYAKAGKREEA 492
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNV--HRALQFHDVVLAQGFRLNQV 116
G+ + A ++ + +RG P I+F TLI G + + A++ D+V G R + +
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI 298
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+Y TL++ + A++ +E P++ YN +I + L + A L+ E+
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMEL 358
Query: 177 IVKGISPNVVTYNALIYGF 195
+KG P+ VTYN+L+Y F
Sbjct: 359 ELKGFFPDAVTYNSLLYAF 377
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV--LAN 70
+N ++ ++ +S A L M G P L++ + LIN G T +V L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ G +P IT+ TL+ N+ A++ + + A + + +Y +I+ + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
+ A ++E + P+ V YN+++ + ++ +Y +M G + +TYN
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 191 LIYGFCIVGQLKQAIGL 207
+I+ + GQL A+ L
Sbjct: 408 IIHMYGKQGQLDLALQL 424
Score = 57.4 bits (137), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 85/193 (44%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ ++ + K K + A S+ + +G TP L T + L++ + G A ++ ++
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G PT + L+ LC+ G + + + GF++++ S +++ + G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
+ ++ +P + +Y +I+ LCK V A + SEM + +N+++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 193 YGFCIVGQLKQAI 205
+ + K+ +
Sbjct: 935 KMYTAIEDYKKTV 947
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 1/165 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQME-ITGITPSLVTLSILINCHCYLG 59
M +M + +N ++ K A+ L + M+ ++G P +T ++LI+
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+T A ++++ +L G +PT T++ LI G G A +L G + + ++Y
Sbjct: 453 RTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDN 164
+++ L + ET A R + P+ +Y +I L K+N
Sbjct: 513 VMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKEN 557
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 82/190 (43%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
TP + +N ++++ + Y A ++ M G +P++ +++IL++ C G+ +
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
V+ + GF+ + + ++ GN+ + + + A G+ Y +I LC
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K A + ++E + ++N+++ +Y + G+ P+
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDET 963
Query: 187 TYNALIYGFC 196
TYN LI +C
Sbjct: 964 TYNTLIIMYC 973
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 1/208 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M R P + +N +++ + + A L ++E+ G P VT + L+
Sbjct: 323 MEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERN 382
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYG 119
T V + K GF +T+ T+I +G + ALQ + D+ G + ++Y
Sbjct: 383 TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT 442
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
LI+ L K T A + ++ I P + Y+ +I K A + +S M+
Sbjct: 443 VLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGL 207
G P+ + Y+ ++ + ++A GL
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWGL 530
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 89.7 bits (221), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 96/206 (46%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
R P ++ ++ L+K + L M+ G +I+I+ C G+ A
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
+ +L + +GF+PT +T+ ++I GL + A + ++ LN V Y +LI+G
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
K+G A L ++ + + PN+ +N+++D+L K ++ A + M +PN
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
VTY LI G C V + +A E
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQE 752
Score = 88.2 bits (217), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 96/203 (47%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ + V+ L K A L + + I ++V S LI+ +G+ A+ +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L ++++G P T+ +L+ L ++ AL + NQV+YG LINGLCK
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ + + A F ++++ Q + P+ + Y T+I L K ++ A L+ G P+
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
YNA+I G + A L +E
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEE 822
Score = 86.3 bits (212), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 87/169 (51%)
Query: 42 TPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ 101
+P L L+ ++C G+ ++ I R F P +++ LI GL G + +
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 102 FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
+ QG L+ +Y +I+G CK G+ + A + L +++ + P VV Y ++ID L
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 162 KDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
K + + A L+ E K I NVV Y++LI GF VG++ +A +L+E
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Score = 80.1 bits (196), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 21 VKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTT 80
VK + + M P+ + LI + + ++ + + G++PT
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 81 ITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQ 140
FTTLI+G G V AL D + + + V Y I+ K+G+ A +F +
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 141 IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQ 200
IE + P+ V Y ++I LCK N + A ++ + P YN +I G+ G+
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 201 LKQAIGLLD 209
+A LL+
Sbjct: 324 FDEAYSLLE 332
Score = 80.1 bits (196), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 98/205 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ +P + N + + K ++ +++ P + SILI+ G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + ++ ++G T + +I G C G V++A Q + + +GF V+YG+
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+GL K+ A + + + I NVV+Y+++ID K + A + E++ KG
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAI 205
++PN+ T+N+L+ ++ +A+
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEAL 712
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P + + ++ L K A+ + +E P + +I + G+ A+
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
S+L +G P+ I + ++ L G V AL+ + + + N +Y LI+ L
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDML 387
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ G+ A E ++ + PNV N ++D LCK + AC ++ EM K +P+
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 186 VTYNALIYGFCIVGQLKQA 204
+T+ +LI G VG++ A
Sbjct: 448 ITFCSLIDGLGKVGRVDDA 466
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 89/210 (42%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + ++ + H ++L +QM+ G P++ + LI G+
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
SA S+L + + + I G V A +F + A G + ++V+Y +
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I LCK A+E +E +P YNT+I A +L KG
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+V+ YN ++ +G++ +A+ + +E
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 1/201 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I+ +N + S K A ++E G+ P VT + +I C + A +
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
++ K P T + T+I G G A + A+G + ++Y ++ L KMG
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+ AL+ +++ PN+ YN +ID LC+ + A L M G+ PNV T N
Sbjct: 358 KVDEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
++ C +L +A + +E
Sbjct: 417 IMVDRLCKSQKLDEACAMFEE 437
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/245 (24%), Positives = 100/245 (40%), Gaps = 35/245 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + N ++ L K++ A ++ +M+ TP +T LI+ +G+
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGL------------------------------ 90
A+ V +L + +I +T+LIK
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 91 ---CL--RGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL 145
C+ G + + + A+ F + SY LI+GL K G + E ++ Q
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 146 IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ + YN +ID CK V+ A L EM KG P VVTY ++I G + +L +A
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 206 GLLDE 210
L +E
Sbjct: 643 MLFEE 647
Score = 73.6 bits (179), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 81/169 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
++Q +TP + +N +L +LVK + + A+ + M+ TP+ VT ILIN C + +
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF + K+G +P+TI++TT+I GL GN+ A D A G + Y
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHA 169
+I GL A + + + + ++D+L K++ + A
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 1/191 (0%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
R P +N ++ + A SL + G PS++ + ++ C +G+ A
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
V +K+ P T+ LI LC G + A + D + G N + +++
Sbjct: 363 LKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR 421
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
LCK + A +++ ++ P+ + + ++ID L K V A +Y +M+ N
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN 481
Query: 185 VVTYNALIYGF 195
+ Y +LI F
Sbjct: 482 SIVYTSLIKNF 492
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 80/177 (45%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
RI ++ ++ ++ K A + ++ G+TP+L T + L++ + A
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
++ + P +T+ LI GLC ++A F + QG + + +SY T+I+G
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
L K G + A + + +P+ YN +I+ L N A +L+ E +G+
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 79/140 (56%)
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+L+ PTTIT+ ++I G C + V A + D + ++G + V++ TLING CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
+E ++ + I+ N V Y T+I C+ + A +L +EMI G++P+ +T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
++ G C +L++A +L++
Sbjct: 121 MLAGLCSKKELRKAFAILED 140
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ I P I +N ++ K A + M G +P +VT S LIN +C +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ + + +RG T+T+TTLI G C G++ A + +++ G + +++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 121 LINGLCKMGETSAALEFLRQIE 142
++ GLC E A L ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 88.6 bits (218), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P ++ ++ +L S + + R+ME + P +V +I+IN +C+L
Sbjct: 661 MKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLND 713
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+++ ++ +R P +T+T L+K R N+ R ++ DV + + Y
Sbjct: 714 LKKVYALFKDMKRREIVPDVVTYTVLLKNKPER-NLSREMKAFDV------KPDVFYYTV 766
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ CK+G+ A Q+ + P+ Y +I CK + A ++ MI G
Sbjct: 767 LIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG 826
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+VV Y ALI G C G + +A+ L+ E
Sbjct: 827 VKPDVVPYTALIAGCCRNGFVLKAVKLVKE 856
Score = 81.6 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 86/198 (43%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
I + KV+ L A S+ ME GI P + S +I H A V
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+LK+ + + +++++ C GN A L++V Y + L K+G+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
A+E R++ G+ I P+V+ Y T+I C S A +L EM G +P++V YN
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 191 LIYGFCIVGQLKQAIGLL 208
L G G ++A L
Sbjct: 472 LAGGLATNGLAQEAFETL 489
Score = 80.9 bits (198), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 78/155 (50%)
Query: 56 CYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQ 115
CY + A SV+ ++ K G P ++ +I+G N+ +A+ + +L + R+N
Sbjct: 302 CYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINC 361
Query: 116 VSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSE 175
V +++ C+MG S A + ++ I + V YN D+L K V A L+ E
Sbjct: 362 VIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFRE 421
Query: 176 MIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
M KGI+P+V+ Y LI G C+ G+ A L+ E
Sbjct: 422 MTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIE 456
Score = 77.4 bits (189), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 89/199 (44%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P + ++ ++ K + A+ + +M + V +S ++ C+C +G + A+
Sbjct: 322 IDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAY 381
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ + + + L G V A++ + +G + ++Y TLI G
Sbjct: 382 DLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGC 441
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C G+ S A + + +++G P++V+YN + L + L A M +G+ P
Sbjct: 442 CLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTY 501
Query: 186 VTYNALIYGFCIVGQLKQA 204
VT+N +I G G+L +A
Sbjct: 502 VTHNMVIEGLIDAGELDKA 520
Score = 72.0 bits (175), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 35/237 (14%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ + P + K++ + + + A + I P L T +I+IN +C L +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+++ ++ +R +P +T++ L+ ++ R ++ DV+ + V Y
Sbjct: 651 PKQAYALFEDMKRRDVKPDVVTYSVLLNS-DPELDMKREMEAFDVI------PDVVYYTI 703
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVM---------------------------- 152
+IN C + + + ++ + I+P+VV
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFY 763
Query: 153 YNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
Y +ID CK + A ++ +MI G+ P+ Y ALI C +G LK+A + D
Sbjct: 764 YTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFD 820
Score = 67.0 bits (162), Expect = 8e-12, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 4/204 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ R + + +L + ++S A L ++ T I+ V ++ + LG+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + +G P I +TTLI G CL+G A + G + V Y
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L GL G A E L+ +E + + P V +N +I+ L + A Y + K
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Query: 181 ISPNVVTYNALIYGFCIVGQLKQA 204
+ +++ GFC G L A
Sbjct: 532 RENDA----SMVKGFCAAGCLDHA 551
Score = 60.8 bits (146), Expect = 6e-10, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 31/216 (14%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
TP I+ +N + L A + ME G+ P+ VT +++I G+ A +
Sbjct: 463 TPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEA 522
Query: 67 VL--------------------ANILKRGFQ---------PTTITFTTLIKGLCLRGN-V 96
A L F+ P ++ FT L LC + +
Sbjct: 523 FYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFT-LFTSLCAEKDYI 581
Query: 97 HRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTI 156
+A D + G + YG LI C++ A EF + + I+P++ Y +
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641
Query: 157 IDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
I++ C+ N A L+ +M + + P+VVTY+ L+
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL 677
Score = 60.5 bits (145), Expect = 7e-10, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 8/178 (4%)
Query: 16 VLTSLVKTKHY-STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKR 74
+ TSL K Y S A L +M G+ P LI C + A ++ +
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
P T+T +I C +A + + + + + V+Y L+N +
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN-------SDPE 682
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
L+ R++E +IP+VV Y +I+ C N + L+ +M + I P+VVTY L+
Sbjct: 683 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL 740
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+ A +L + K G +P + LI C NV +A +F ++++ + + +Y +
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
IN C++ E A ++ + + P+VV Y+ +++S ++ EM +
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDV 694
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+VV Y +I +C + LK+ L +
Sbjct: 695 IPDVVYYTIMINRYCHLNDLKKVYALFKD 723
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 38 ITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVH 97
I G P L + S + G+ VL + +GF+PT + +K LC G +
Sbjct: 291 IRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK 350
Query: 98 RALQFHDVVLAQGFRLNQVS-YGTLINGLCKMGETSAALEFLRQIEGQL-IIPNVVMYNT 155
A+ + + QG L V Y LI GLC G++ A+ +L+++ Q+ + N Y T
Sbjct: 351 EAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQT 410
Query: 156 IIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++D LC+D A + EM++K P V TY+ +I G C + + +A+ L+E
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEE 465
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
Query: 36 MEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGF-QPTTITFTTLIKGLCLRG 94
M G P+ + C G+ A SV+ + +G PT + LIKGLC G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 95 NVHRALQFHDVVLAQ-GFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMY 153
A+ + + Q N+ +Y TL++GLC+ G+ A + + ++ + P V Y
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCI 197
+ +I LC + A EM+ + + P + AL C
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCF 487
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 100/245 (40%), Gaps = 48/245 (19%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVT-LSILINCHCYLGQTTSAFSVLA 69
+ F+ +L +VK A + R+ S +T L++L+ C + ++ A V
Sbjct: 117 LSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQ 176
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQ-------VSYGTLI 122
+ +G P ++ L+KG CL G + A ++ + +R++Q V Y L+
Sbjct: 177 EMNYQGCYPDRDSYRILMKGFCLEGKLEEATH---LLYSMFWRISQKGSGEDIVVYRILL 233
Query: 123 NGLCKMGETSAALEFLRQI------------------------EGQLIIPNVVMYNTIID 158
+ LC GE A+E L +I EG + ++ I
Sbjct: 234 DALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRG 293
Query: 159 SL-CKDNLVSHACNLYSE------------MIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
++ C D+ + A +L+ E M KG P Y A + C G+LK+A+
Sbjct: 294 AIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAV 353
Query: 206 GLLDE 210
++++
Sbjct: 354 SVINK 358
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 38 ITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVH 97
I G P L + S + G+ VL + +GF+PT + +K LC G +
Sbjct: 291 IRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK 350
Query: 98 RALQFHDVVLAQGFRLNQVS-YGTLINGLCKMGETSAALEFLRQIEGQL-IIPNVVMYNT 155
A+ + + QG L V Y LI GLC G++ A+ +L+++ Q+ + N Y T
Sbjct: 351 EAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQT 410
Query: 156 IIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++D LC+D A + EM++K P V TY+ +I G C + + +A+ L+E
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEE 465
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
Query: 36 MEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGF-QPTTITFTTLIKGLCLRG 94
M G P+ + C G+ A SV+ + +G PT + LIKGLC G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 95 NVHRALQFHDVVLAQ-GFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMY 153
A+ + + Q N+ +Y TL++GLC+ G+ A + + ++ + P V Y
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCI 197
+ +I LC + A EM+ + + P + AL C
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCF 487
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 100/245 (40%), Gaps = 48/245 (19%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVT-LSILINCHCYLGQTTSAFSVLA 69
+ F+ +L +VK A + R+ S +T L++L+ C + ++ A V
Sbjct: 117 LSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQ 176
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQ-------VSYGTLI 122
+ +G P ++ L+KG CL G + A ++ + +R++Q V Y L+
Sbjct: 177 EMNYQGCYPDRDSYRILMKGFCLEGKLEEATH---LLYSMFWRISQKGSGEDIVVYRILL 233
Query: 123 NGLCKMGETSAALEFLRQI------------------------EGQLIIPNVVMYNTIID 158
+ LC GE A+E L +I EG + ++ I
Sbjct: 234 DALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRG 293
Query: 159 SL-CKDNLVSHACNLYSE------------MIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
++ C D+ + A +L+ E M KG P Y A + C G+LK+A+
Sbjct: 294 AIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAV 353
Query: 206 GLLDE 210
++++
Sbjct: 354 SVINK 358
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 88.2 bits (217), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I ++ +++S K +AI L +M+ + P+ + L+ + +G+ A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ + G PT T+T LIKGL G V A F+ +L G + V L+N L K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNL-VSHACNLYSEMIVKGISPNVV 186
+G ++ P VV YNT+I +L + VS + + +M +SP+
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 187 TYNALIYGFCIVGQLKQAIGLLDE 210
TY+ LI G+C ++++A+ LL+E
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEE 434
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 5 RITPPIIEFNKVLTSLVKTK-HYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTS 63
R TP ++ +N V+ +L ++K H S S +M+ ++PS T SILI+ +C +
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVV--LAQGF-RLNQVSYGT 120
A +L + ++GF P + +LI L G R +++ L + F ++ Y
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINAL---GKAKRYEAANELFKELKENFGNVSSRVYAV 484
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I K G+ S A++ +++ Q P+V YN ++ + K +++ A +L +M G
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
++ ++N ++ GF G ++AI + +
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFE 573
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 7/212 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINC----HC 56
ML+ +TP ++ N ++ L K ++ +M + TP++V+ + +I
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKA 388
Query: 57 YLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
++ + +S F + P+ T++ LI G C V +AL + + +GF
Sbjct: 389 HVSEVSSWFDKMK---ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPA 445
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+Y +LIN L K AA E ++++ + +Y +I K +S A +L++EM
Sbjct: 446 AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM 505
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+G P+V YNAL+ G G + +A LL
Sbjct: 506 KNQGSGPDVYAYNALMSGMVKAGMINEANSLL 537
Score = 70.5 bits (171), Expect = 7e-13, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITG-ITPSLVTLSILINCHCYLGQTTS 63
+ P +N V+ L++ + + +M G P +T S LI+ + LG+ S
Sbjct: 192 KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDS 251
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
A + + QPT +TTL+ G V +AL + + G +Y LI
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
GL K G A F + + + P+VV N +++ L K V N++SEM + +P
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP 371
Query: 184 NVVTYNALI 192
VV+YN +I
Sbjct: 372 TVVSYNTVI 380
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 8 PPI-IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
PP + ++ +L K K Y A L ++++ S +++I G+ + A
Sbjct: 441 PPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVD 500
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ + +G P + L+ G+ G ++ A + G R + S+ ++NG
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFA 560
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
+ G A+E I+ I P+ V YNT++ + A + EM KG + +
Sbjct: 561 RTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAI 620
Query: 187 TYNALI 192
TY++++
Sbjct: 621 TYSSIL 626
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 73 KRGFQPTTITFTTLIKGL---CLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+R FQ T+ TLI+ L L G ++R +Q +VV ++ L+ L +
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQ--EVVRNTYVSVSPAVLSELVKALGRAK 176
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG-ISPNVVTY 188
S AL Q +G+ P YN++I L ++ +Y+EM +G P+ +TY
Sbjct: 177 MVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 189 NALIYGFCIVGQLKQAIGLLDE 210
+ALI + +G+ AI L DE
Sbjct: 237 SALISSYEKLGRNDSAIRLFDE 258
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 55/118 (46%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N +++ +VK + A SL R+ME G + + +I++N G A +
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
I G +P +T+ TL+ G A + + +GF + ++Y ++++ +
Sbjct: 572 FETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 42/237 (17%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLGQTTS 63
+I P FN ++ S + + R+ME G +P++ + ++L+ +C G +
Sbjct: 240 KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSE 299
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLI 122
A V + RG + + T+I GLC V +A + F D+ L +G ++Y L+
Sbjct: 300 AEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGL-KGIECTCLTYEHLV 358
Query: 123 NGLCKMGETSAALEFLRQI-----------------------EGQLII------------ 147
NG CK G+ + L R++ +GQ ++
Sbjct: 359 NGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVRE 418
Query: 148 ----PNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQ 200
P+ Y ++ LC+D + A N+ +EM+ KG P+ TY A I G+ IVG
Sbjct: 419 AMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 85.1 bits (209), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 93/203 (45%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + FN ++ LV+ + A+ + +M + G++ + T + ++ + +G T AF
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ G T+ L+K C G + AL + A+ N Y LI+G +
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ A + ++Q++ + + P++ Y + I + K ++ A EM G+ PN+ T
Sbjct: 742 RGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKT 801
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y LI G+ ++A+ +E
Sbjct: 802 YTTLIKGWARASLPEKALSCYEE 824
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 98/210 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P +I +N ++++ + AI ++M+ P+ T +I+ + G
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ V + + G PT TF LI GL + + +A++ D + G N+ +Y
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++ G +G+T A E+ +++ + + ++ Y ++ + CK + A + EM +
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I N YN LI G+ G + +A L+ +
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 92/197 (46%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ K++ + +T + A +L R+ME GI + +++ + + V +
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ GF PT +T+ LI G + +AL+ V+ +G + N +Y +ING K+ + +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A + + + P+V++YN II + C + A EM P T+ +I
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 193 YGFCIVGQLKQAIGLLD 209
+G+ G +++++ + D
Sbjct: 597 HGYAKSGDMRRSLEVFD 613
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 93/210 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++R P F ++ K+ ++ + M G P++ T + LIN Q
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L + G T+T +++G G+ +A ++ + +G ++ +Y
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEA 699
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ CK G +AL +++ + I N +YN +ID + V A +L +M +G
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 759
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P++ TY + I G + +A ++E
Sbjct: 760 VKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 35/240 (14%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILIN------------ 53
ITP + ++ + + A+S R+M+ GI SLVT S+++
Sbjct: 340 ITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAAD 399
Query: 54 -----------------------CHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGL 90
HC A +++ + + G + T++ G
Sbjct: 400 YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY 459
Query: 91 CLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
+ + + L + GF V+YG LIN K+G+ S ALE R ++ + + N+
Sbjct: 460 TMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNL 519
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
Y+ +I+ K ++A ++ +M+ +G+ P+V+ YN +I FC +G + +AI + E
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 75/160 (46%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I + +L + K+ +A++++++M I + +ILI+ G A ++
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ K G +P T+T+ I G+++RA Q + + A G + N +Y TLI G +
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHA 169
AL +++ I P+ +Y+ ++ SL ++ A
Sbjct: 814 LPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 76/171 (44%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+M GITP+ + LI+ + A S + + + G + + +T++ ++ G G
Sbjct: 334 RMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAG 393
Query: 95 NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
+ A + D LN YG +I C+ A +R++E + I + +Y+
Sbjct: 394 HAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYH 453
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
T++D ++ + G +P VVTY LI + VG++ +A+
Sbjct: 454 TMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKAL 504
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 70/163 (42%)
Query: 43 PSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF 102
PS +++ + G A + RG PT+ +T+LI + ++ AL
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 103 HDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK 162
+ +G ++ V+Y ++ G K G AA + + + N +Y II + C+
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 163 DNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+ A L EM +GI + Y+ ++ G+ +V K+ +
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL 469
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P I FN ++ + K K A + ++ME G+ P VT + + C+ G+T A
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 66 SVLAN--ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
S + ++K +P T ++ G C G V L+F + N V + +LIN
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
G ++ + E L ++ + +V+ Y+T++++ + A ++ EM+ G+ P
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLLD 209
+ Y+ L G+ + K+A LL+
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLE 389
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I + +L ++ K Y + S+ ++E +G + + +IN G A
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG---FRLNQVSYGTLING 124
L + + G PTT T+ TLIKG + G R+ + D++L +G N ++ L+
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC---KDNLVSHACNLYSEMIVK-G 180
CK + A E ++++E + P+ V YNTI + C K V + +M++K
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAESEVVEKMVMKEK 255
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAI 205
PN T ++ G+C G+++ +
Sbjct: 256 AKPNGRTCGIVVGGYCREGRVRDGL 280
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
Query: 34 RQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLR 93
R+M+ + +LV + LIN + VL + + + IT++T++
Sbjct: 284 RRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSA 343
Query: 94 GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLII---PNV 150
G + +A Q ++ G + + +Y L G + E A E L LI+ PNV
Sbjct: 344 GYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET----LIVESRPNV 399
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
V++ T+I C + + A ++++M G+SPN+ T+ L++G+ V Q +A +L
Sbjct: 400 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 457
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 51 LINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG 110
L+N G+ A +V + + G +P+ I++TTL+ + ++ V G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 111 FRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHAC 170
+L+ + + +IN + G A++ L +++ + P YNT+I +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 171 NLYSEMIVKG---ISPNVVTYNALIYGFCIVGQLKQA 204
L M+ +G + PN+ T+N L+ +C ++++A
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%)
Query: 79 TTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFL 138
T + T L+ L RG H A + G R + +SY TL+ + + + +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 139 RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIV 198
++E + + +N +I++ + + A +M G++P TYN LI G+ I
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 199 GQLKQAIGLLD 209
G+ +++ LLD
Sbjct: 164 GKPERSSELLD 174
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 84.3 bits (207), Expect = 5e-17, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 101/210 (48%), Gaps = 1/210 (0%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
++ + P + F +L + A + QM+ G+ P +V + L++ + + G+
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLC-LRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ ++ ++ KRGF+P +T LI+ LC + A++ + G + V+Y
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+G CK G L + + ++P+ V Y I+ + K L +M +G
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+++ YN +I C +G++K+A+ L +E
Sbjct: 408 CHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Score = 81.3 bits (199), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
Query: 1 MLQMR---ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCY 57
++QM+ + P I+ F +L+ + A L M G P++ ++LI C
Sbjct: 259 LVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
Query: 58 L-GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
+ A V + + G + +T+T LI G C G + + D + +G +QV
Sbjct: 319 TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQV 378
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+Y ++ K + LE + +++ + P++++YN +I CK V A L++EM
Sbjct: 379 TYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM 438
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G+SP V T+ +I GF G L +A E
Sbjct: 439 EANGLSPGVDTFVIMINGFTSQGFLIEACNHFKE 472
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 3/188 (1%)
Query: 8 PPIIEFNKVLTSLVKT-KHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
P + + ++ +L +T K A+ + +ME G +VT + LI+ C G +S
Sbjct: 304 PNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYS 363
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
VL ++ K+G P+ +T+ ++ + L+ + + +G + + Y +I C
Sbjct: 364 VLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI--SPN 184
K+GE A+ ++E + P V + +I+ + ACN + EM+ +GI +P
Sbjct: 424 KLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Query: 185 VVTYNALI 192
T +L+
Sbjct: 484 YGTLKSLL 491
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 20 LVKTKHYSTAISLSRQMEITG---ITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGF 76
L K + + L +M T I P L +L+ A VL + K G
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 77 QPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAAL 135
+P F L+ LC G+V A + F D + + F N + +L+ G C+ G+ A
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFED--MREKFPPNLRYFTSLLYGWCREGKLMEAK 256
Query: 136 EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
E L Q++ + P++V++ ++ ++ A +L ++M +G PNV Y LI
Sbjct: 257 EVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Query: 196 C 196
C
Sbjct: 317 C 317
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 6/200 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + + +++ + K + + + L +M+ G P L+ +++I C LG+
Sbjct: 368 MRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGE 427
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + G P TF +I G +G + A ++++G + YGT
Sbjct: 428 VKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI-FSAPQYGT 486
Query: 121 ---LINGLCKMGETSAALEFLRQIEGQL--IIPNVVMYNTIIDSLCKDNLVSHACNLYSE 175
L+N L + + A + I + NV + I +L V AC+ +
Sbjct: 487 LKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLD 546
Query: 176 MIVKGISPNVVTYNALIYGF 195
M+ + P TY L+ G
Sbjct: 547 MMEMDLMPQPNTYAKLMKGL 566
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 3/210 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + R P I + +L + + ++R+M+ G P +V I+IN HC +
Sbjct: 223 MKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKK 282
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + +R +P+ F +LI GL ++ AL+F + + GF L +Y
Sbjct: 283 YEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNA 342
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ C A + + ++ + + PN Y+ I+ L + A +Y M
Sbjct: 343 LVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---S 399
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P V TY ++ FC +L AI + DE
Sbjct: 400 CEPTVSTYEIMVRMFCNKERLDMAIKIWDE 429
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 84/190 (44%)
Query: 21 VKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTT 80
+ + AI +ME G + +++ A V + K+ F+P
Sbjct: 173 ARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDI 232
Query: 81 ITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQ 140
++T L++G N+ R + + + +GF + V+YG +IN CK + A+ F +
Sbjct: 233 KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 141 IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQ 200
+E + P+ ++ ++I+ L + ++ A + G TYNAL+ +C +
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 201 LKQAIGLLDE 210
++ A +DE
Sbjct: 353 MEDAYKTVDE 362
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q P F ++ L K + A+ + + +G T + L+ +C+ +
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ + + +G P T+ ++ L + R+ + ++V +Y
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHLI---RMQRSKEAYEVYQTMSCEPTVSTYEI 409
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++ C A++ +++G+ ++P + M++++I +LC +N + AC ++EM+ G
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Query: 181 ISP 183
I P
Sbjct: 470 IRP 472
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
+ AI + M G PS + + ++N + + K G + L
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
IKGLC GN+ ALQ D Q R N +++ LI G C G+ A + L ++E + I
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI 268
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
P+ + +N +I L K V +L M VKG PN TY ++YG
Sbjct: 269 EPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P FN +L LV K + + G+ L+ILI C G +A +
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L ++ +P +TF+ LI+G C +G A + + + + + +++ LI+GL K
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G ++ L +++ + PN Y ++ L A + S+MI G+ P+ ++
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 188 YNALIYGFC 196
Y ++ G C
Sbjct: 345 YKKMVLGLC 353
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N ++ L ++ + A+ L + P+++T S LI C G+ AF +L + K
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
+P TITF LI GL +G V + + + +G N +Y ++ GL
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A E + Q+ + P+ + Y ++ LC+ V + +M+ G P + + ++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 194 GFCIVGQ 200
C+V +
Sbjct: 386 --CVVSK 390
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ---GFRLNQ 115
G+ A +L + G P++ +F ++ L + + H + ++ G ++
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLV---SAKLFDEIHKIFVSAPKLGVEIDA 202
Query: 116 VSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSE 175
LI GLC+ G AAL+ L + Q PNV+ ++ +I C A L
Sbjct: 203 CCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLER 262
Query: 176 MIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
M + I P+ +T+N LI G G++++ I LL+
Sbjct: 263 MEKERIEPDTITFNILISGLRKKGRVEEGIDLLE 296
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 6/173 (3%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
Q + P ++ F+ ++ + A L +ME I P +T +ILI+ G+
Sbjct: 230 QQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVE 289
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
+L + +G +P T+ ++ GL + A + +++ G R + +SY ++
Sbjct: 290 EGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMV 349
Query: 123 NGLCKMGETSAALEF---LRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNL 172
GLC ET + +E LRQ+ +P +M+ ++ + N NL
Sbjct: 350 LGLC---ETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQANL 399
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQM-EITGITPSLVTLSILINCHCYLG 59
M++ ++ P + F ++ L K A+ + M ++ G+ P++ + LI C +G
Sbjct: 178 MVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIG 237
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ + AF + + + ++TLI L G + + + +G + + V+Y
Sbjct: 238 ELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYN 297
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
LING C ++ +A L ++ + + P+V+ YN I+ + A L+ +M +
Sbjct: 298 VLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR 357
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G SP+ ++Y + G C Q ++A +LDE
Sbjct: 358 GCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 39/243 (16%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
RI P I F V+ + K S A+ + +M ++ +L+ L++ G+
Sbjct: 78 RIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKM 137
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
L++I + G +P T+ LI G G AL+ D ++ + + V++GTLI+G
Sbjct: 138 KERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHG 196
Query: 125 LCK------------------------------------MGETSAALEFLRQI-EGQLII 147
LCK +GE S A + + EG++ +
Sbjct: 197 LCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV 256
Query: 148 PNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGL 207
+ +Y+T+I SL K + + EM KG P+ VTYN LI GFC+ + A +
Sbjct: 257 -DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRV 315
Query: 208 LDE 210
LDE
Sbjct: 316 LDE 318
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + TP +N V+ L + SL ++ P + T I++N C
Sbjct: 503 MVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKND 562
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+AF+++ + + G +PT ++++I L +G V A + +L G + ++++Y
Sbjct: 563 RDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMI 622
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+IN + G A E + ++ + P+ Y +I K ++ C +M+ G
Sbjct: 623 MINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG 682
Query: 181 ISPNVVTYNALIYGFCIVGQLK 202
+SPNVV Y ALI F G K
Sbjct: 683 LSPNVVLYTALIGHFLKKGDFK 704
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 14 NKVLTSLVKTK-------HYSTAISLSRQMEITG-----ITPSLVTLSILINCHCYLGQT 61
K+L L++TK S S ME+ G I P+L + +I +C G+
Sbjct: 751 EKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRL 810
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A++ L ++ K G P +T+T L+K G++ A+ D+ +QV Y TL
Sbjct: 811 DEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAI---DLFEGTNCEPDQVMYSTL 867
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
+ GLC AL + +++ I PN Y ++ LC L A + +M I
Sbjct: 868 LKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDI 927
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLL 208
P + + LIY C +L++A L
Sbjct: 928 WPRSINHTWLIYILCEEKKLREARALF 954
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
++ P + + V+ L K A ++ ME G+ P++ S +I G+
Sbjct: 540 ELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A A +L+ G QP I + +I G + A + + V+ R + +Y LI
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+G KMG ++L ++ + PNVV+Y +I K + L+ M I
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 183 PNVVTYNALIYGF 195
+ + Y L+ G
Sbjct: 720 HDHIAYITLLSGL 732
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 51 LINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG 110
L C C G A ++ ++ G+ + +T L+K C N+ A++ + ++ +
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERS 302
Query: 111 FRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHAC 170
F L+ + TLI+G K+G Q+ + + NV Y+ +I S CK+ V +A
Sbjct: 303 FELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYAL 362
Query: 171 NLY-SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
L+ + + IS NV Y LI+GF G + +A+ LL
Sbjct: 363 RLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLL 401
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P + ++ LVK + + A + ++ +G PS + S++++ C + AF
Sbjct: 127 IVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAF 186
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS-YGTLING 124
+ +RG L KGLC G+++ A+ D + V+ Y +L
Sbjct: 187 HCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYC 246
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
CK G + A +E + VMY ++ CKDN ++ A LY M+ + +
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELD 306
Query: 185 VVTYNALIYGFCIVGQLKQA 204
+N LI+GF +G L +
Sbjct: 307 PCIFNTLIHGFMKLGMLDKG 326
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 39/247 (15%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ I P I + ++ + + A L ++ + PS T ++LI+ +G
Sbjct: 608 MLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGM 667
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
L +L+ G P + +T LI +G+ + ++ + + ++Y T
Sbjct: 668 MEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYIT 727
Query: 121 LINGLCKM--------------------------------------GETSAALEFLRQIE 142
L++GL + G S A+E + +++
Sbjct: 728 LLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVK 787
Query: 143 GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLK 202
+ IIPN+ ++NTII C + A N M +GI PN+VTY L+ G ++
Sbjct: 788 -KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIE 846
Query: 203 QAIGLLD 209
AI L +
Sbjct: 847 SAIDLFE 853
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKR- 74
V T+L ++Y A+S +M G TP + + +I C + + L NI++
Sbjct: 483 VTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKC-LFQENIIEDLASLVNIIQEL 541
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
F P T+ ++ LC + + A D + G R Y ++I L K G A
Sbjct: 542 DFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEA 601
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
E ++ I P+ + Y +I++ ++ + A L E++ + P+ TY LI G
Sbjct: 602 EETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG 661
Query: 195 FCIVGQLKQAIGLLDE 210
F +G +++ LD+
Sbjct: 662 FVKMGMMEKGCQYLDK 677
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P + N ++T A + M+ GI P+LVT +IL+ H G SA
Sbjct: 790 IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAI 849
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ +P + ++TL+KGLC AL + G N+ SY L+ L
Sbjct: 850 DLFEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
C T A++ ++ + I P + + +I LC++ + A L++ M+ G S
Sbjct: 907 CYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRS 963
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 1/205 (0%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
R+ P+ + + K + A +L ME+ G V + L+ +C T A
Sbjct: 232 RMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMA 291
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
+ +++R F+ F TLI G G + + ++ +G + N +Y +I
Sbjct: 292 MRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGS 351
Query: 125 LCKMGETSAALE-FLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
CK G AL F+ + I NV Y +I K + A +L M+ GI P
Sbjct: 352 YCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP 411
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLL 208
+ +TY L+ +LK A+ +L
Sbjct: 412 DHITYFVLLKMLPKCHELKYAMVIL 436
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%)
Query: 46 VTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDV 105
V L+++ C +A S + ++ G P ++ ++IK L + ++
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 106 VLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNL 165
+ F + +Y ++N LCK + AA + +E + P V +Y++II SL K
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 166 VSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
V A +++M+ GI P+ + Y +I + G++ +A L++E
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEE 642
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 98/203 (48%), Gaps = 8/203 (3%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I + ++T+L + KH+ + +SL ++E G+ P + + +IN G A +
Sbjct: 352 PSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 411
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLA-QGFRLNQVSYGTLINGLC 126
+ + G +PT TF TLIKG G + + + D++L + + N + L+ C
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACN----LYSEMIVKGIS 182
+ A + +++ + P+VV +NT+ + + + C + M+ +
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR---IGSTCTAEDMIIPRMLHNKVK 528
Query: 183 PNVVTYNALIYGFCIVGQLKQAI 205
PNV T ++ G+C G++++A+
Sbjct: 529 PNVRTCGTIVNGYCEEGKMEEAL 551
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML ++ P + ++ + A+ +M+ G+ P+L + LI +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
V+ + + G +P +TF+TL+ G++ R + + +L G + ++
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI-VK 179
L G + GE A + L Q+ + PNVV+Y II C + A +Y +M +
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 180 GISPNVVTYNALIYGFCIVGQLKQ 203
G+SPN+ TY LI+GF G+ KQ
Sbjct: 702 GLSPNLTTYETLIWGF---GEAKQ 722
Score = 75.5 bits (184), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 15 KVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKR 74
K++ L++ A S+ + G PSL+T + L+ S S+++ + K
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN 383
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG---ET 131
G +P TI F +I GN+ +A++ + + G + ++ TLI G K+G E+
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
S L+ + + +++ PN N ++ + C + A N+ +M G+ P+VVT+N L
Sbjct: 444 SRLLDMM--LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501
Query: 192 IYGFCIVG 199
+ +G
Sbjct: 502 AKAYARIG 509
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 95/198 (47%), Gaps = 1/198 (0%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS-VLANIL 72
N ++ + + A ++ +M+ G+ P +VT + L + +G T +A ++ +L
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRML 523
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+P T T++ G C G + AL+F + G N + +LI G + +
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
E + +E + P+VV ++T++++ + +Y++M+ GI P++ ++ L
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 193 YGFCIVGQLKQAIGLLDE 210
G+ G+ ++A +L++
Sbjct: 644 KGYARAGEPEKAEQILNQ 661
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 1/200 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ + P + FN ++ + + ME G+ P +VT S L+N +G
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ ++L+ G P F+ L KG G +A Q + + G R N V Y
Sbjct: 617 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ 676
Query: 121 LINGLCKMGETSAALEFLRQIEGQL-IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+I+G C GE A++ +++ G + + PN+ Y T+I + A L +M K
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 180 GISPNVVTYNALIYGFCIVG 199
+ P T + G+ +G
Sbjct: 737 NVVPTRKTMQLIADGWKSIG 756
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 66/126 (52%)
Query: 84 TTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEG 143
T L+ GL RG A + ++ +G + + ++Y TL+ L + + L + ++E
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 144 QLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQ 203
+ P+ +++N II++ + + A ++ +M G P T+N LI G+ +G+L++
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 204 AIGLLD 209
+ LLD
Sbjct: 443 SSRLLD 448
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 91/202 (45%), Gaps = 3/202 (1%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTA--ISLSRQMEITGITPSLVTLSILINCHCYLGQTTS 63
+ P ++ FN + + + TA + + R + + P++ T ++N +C G+
Sbjct: 491 VKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLH-NKVKPNVRTCGTIVNGYCEEGKMEE 549
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
A + + G P F +LIKG ++ + D++ G + + V++ TL+N
Sbjct: 550 ALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN 609
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
+G+ E + I P++ ++ + + A + ++M G+ P
Sbjct: 610 AWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRP 669
Query: 184 NVVTYNALIYGFCIVGQLKQAI 205
NVV Y +I G+C G++K+A+
Sbjct: 670 NVVIYTQIISGWCSAGEMKKAM 691
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
G+ P VT I + C G+ A ++ + ++ P T T+ L+K LC ++H
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 100 LQFHDVVLAQ-GFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIID 158
+F D + + + VS+ LI+ +C A+ + ++ P+ +YNTI+
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
C + S A +Y +M +G+ P+ +TYN LI+G G++++A
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 7/203 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILIN--CHCYL 58
M+ + P + + + SL +T A L +++ P T + L+ C C
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 59 GQTTSAFSVLANILKRGF--QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
F + ++ F +P ++FT LI +C N+ A+ + GF+ +
Sbjct: 210 LHVVYEF---VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
Y T++ G C + + S A+ ++++ + + P+ + YNT+I L K V A M
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 177 IVKGISPNVVTYNALIYGFCIVG 199
+ G P+ TY +L+ G C G
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKG 349
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 43 PSLVTLSILINCHCYLGQTT--SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRAL 100
P T IL++ C ++ + VL ++ G +P +T ++ LC G V A
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 101 QFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLII-PNVVMYNTIIDS 159
+ + + +Y L+ LCK + EF+ ++ + P++V + +ID+
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 160 LCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGL 207
+C + A L S++ G P+ YN ++ GFC + + +A+G+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 104/204 (50%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
++P + +N V+ K A + M +G+ + T L++ + G + A
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ + +G T+ + +++ L + G++ A+ + ++ ++++ + ++ GL
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C+ G A+EF RQI + ++ ++V +NT++ +D ++ A + M+V+G+S +
Sbjct: 407 CRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDA 466
Query: 186 VTYNALIYGFCIVGQLKQAIGLLD 209
+++ LI G+ G+L++A+ + D
Sbjct: 467 ISFGTLIDGYLKEGKLERALEIYD 490
Score = 73.9 bits (180), Expect = 7e-14, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
F+ ++ + + A + Q G S+ L+ + C + + + V +
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
G+ TF +I C + AL +L G N VS+ +I+G CK G+
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 133 AALEFLRQI---EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
AL+ L ++ G + PN V YN++I+ CK + A + +M+ G+ N TY
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
AL+ + G +A+ L DE
Sbjct: 331 ALVDAYGRAGSSDEALRLCDE 351
Score = 70.5 bits (171), Expect = 9e-13, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
V+ L + + A+ RQ+ + +V + L++ + A +L ++L +G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAAL 135
I+F TLI G G + RAL+ +D ++ N V Y +++NGL K G AA
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 136 EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG--ISPNVVTYNALIY 193
+ +E I ++V YNT+++ K V A ++ S+M + S ++VT+N +I
Sbjct: 522 AVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMIN 577
Query: 194 GFCIVGQLKQA 204
C G ++A
Sbjct: 578 HLCKFGSYEKA 588
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 48 LSILINCHCYLGQTTSAFSVLANILKRGFQP---TTITFTTLIKGLCLRGNVHRALQFHD 104
LSI+ N G+ S VL+ ++ R +Q + F +L++ G+ A + +
Sbjct: 114 LSIMANLMSVEGEKLSPLHVLSGLI-RSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIE 172
Query: 105 VVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDN 164
A+GF ++ + + L + E + ++++ + NV +N +I S CK++
Sbjct: 173 QTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKES 232
Query: 165 LVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ A +++ M+ G+ PNVV++N +I G C G ++ A+ LL
Sbjct: 233 KLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLL 276
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+ ++ I+ N ++ V+ K + A + M + G++ ++ LI+ + G+
Sbjct: 424 EKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLE 483
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRG------NVHRALQFHDVV-----LAQGF 111
A + ++K + + +++ GL RG V A++ D+V L +
Sbjct: 484 RALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESL 543
Query: 112 R----------------------LNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPN 149
+ ++ V++ +IN LCK G A E L+ + + ++P+
Sbjct: 544 KTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPD 603
Query: 150 VVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
+ Y T+I S K L+ +I++G++P+ Y +++
Sbjct: 604 SITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITG--ITPSLVTLSILINCHCYLGQTTSAFSV 67
I+ +N +L +KT + A + +M+ + SLVT +I+IN C G A V
Sbjct: 532 IVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEV 591
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
L +++RG P +IT+ TLI + + ++ HD ++ QG ++ Y +++ L
Sbjct: 592 LKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPL 649
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++M T ++ +N ++ L K A ++ MEI I VT + L+N G
Sbjct: 492 MIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTGN 547
Query: 61 TTSAFSVLANILKRGFQPTT--ITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
A +L+ + K+ + + +TF +I LC G+ +A + ++ +G + ++Y
Sbjct: 548 VEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITY 607
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
GTLI K +E + Q + P+ +Y +I+ L
Sbjct: 608 GTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPL 649
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 1/185 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAIS-LSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
P + N V+ L+ A+ L+R M I P +V + +I L + A S
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
V + K + T+ +I GLC+ V A +F D V+ R + Y + GLC
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
+ G S A FL + IPNVV YNT+I + L A + EM G +P+ V
Sbjct: 601 QSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAV 660
Query: 187 TYNAL 191
T+ L
Sbjct: 661 TWRIL 665
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
Query: 43 PSLVTLSILINCHCYLGQTTSAFSVLANILKRGF-QPTTITFTTLIKGLCLRGNVHRALQ 101
P TL+ +IN C +G+ A VL +++ F P +T T++ GL +G AL
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 102 FHDVVLAQG-FRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
+ V+ + + V+Y +I GL K+ + A+ Q+E + + Y IID L
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 161 CKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
C N V A + ++I + Y A + G C G L A L
Sbjct: 565 CVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFL 612
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P +N ++ L K A L + PS T +L+ C T A
Sbjct: 338 LKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKAR 397
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+VL +L++ T + ++GLC+ N L +L R ++ + T+INGL
Sbjct: 398 NVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
Query: 126 CKMGETSAALEFLRQ-IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG-ISP 183
CKMG A++ L + G+ P+ V NT++ L A ++ + ++ + I P
Sbjct: 458 CKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKP 517
Query: 184 NVVTYNALIYGF----------CIVGQLKQA 204
VV YNA+I G + GQL++A
Sbjct: 518 GVVAYNAVIRGLFKLHKGDEAMSVFGQLEKA 548
Score = 67.4 bits (163), Expect = 7e-12, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 40/208 (19%)
Query: 43 PSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF 102
PSL + L+N C + + A ++ ++ RG P +TFTTLI G C + A +
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 103 HDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQI--------------------- 141
D + G R N ++ LI G KM + + ++++
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 142 -----EGQL-----IIPNVVM---------YNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
EG I N+ + Y +IDSLC+ A + M KG+
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P +YNA+I+G C G +A LL+E
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEE 367
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
A +L + RG++P ++ +++I LC G A + + LA GF ++ + +I
Sbjct: 74 ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIA 133
Query: 124 GLCKMGETSAALEFLRQIEG--QLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
L + L + ++ G + +P++ YN +++ LC V A L +M +G
Sbjct: 134 RLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGH 193
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+VVT+ LI G+C + +L+ A + DE
Sbjct: 194 LPDVVTFTTLIGGYCEIRELEVAHKVFDE 222
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 87/201 (43%), Gaps = 6/201 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
F ++ S+ + +++ ++ M + +I+ C + A ++ +
Sbjct: 275 FANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+G +P ++ +I GLC G RA Q + F ++ +Y L+ LCK +T
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 133 AA---LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A LE + + EG +YN + LC + + N+ M+ P+ T N
Sbjct: 395 KARNVLELMLRKEGA---DRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN 451
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
+I G C +G++ A+ +LD+
Sbjct: 452 TVINGLCKMGRVDDAMKVLDD 472
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 38 ITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLR---- 93
+ G P + LS +I+ C G+ A L GF P T +I L
Sbjct: 83 LRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPV 142
Query: 94 ---GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
G +HR + F + F + +Y L+N LC + A + + + + +P+V
Sbjct: 143 STLGVIHRLIGFK-----KEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDV 197
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
V + T+I C+ + A ++ EM V GI PN +T + LI GF + ++ L+ E
Sbjct: 198 VTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKE 257
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 89/241 (36%), Gaps = 40/241 (16%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILI--------------- 52
P ++ F ++ + + A + +M + GI P+ +TLS+LI
Sbjct: 195 PDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKL 254
Query: 53 -------------------------NCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLI 87
+ C G F + N+ + +I
Sbjct: 255 MKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMI 314
Query: 88 KGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLII 147
LC H A + ++ ++G + + SY +I+GLCK G A + L +
Sbjct: 315 DSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFF 374
Query: 148 PNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGL 207
P+ Y +++SLCK+ A N+ M+ K + YN + G C++ + + +
Sbjct: 375 PSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNV 434
Query: 208 L 208
L
Sbjct: 435 L 435
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 81.3 bits (199), Expect = 4e-16, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 87/192 (45%)
Query: 4 MRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTS 63
M+ + +I +N + K+K + L +M GI P T + +I+C G
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
A + G +P +T +I GNV AL +D + +R++ V++ TLI
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
G L +++ + PN+V+YN +IDS+ + A +Y ++I G +P
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 184 NVVTYNALIYGF 195
N TY AL+ +
Sbjct: 349 NWSTYAALVRAY 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/192 (23%), Positives = 81/192 (42%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ I P F +++ + A+ +M G P VT++ +I+ + G
Sbjct: 201 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 260
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S+ ++ +TF+TLI+ + GN L ++ + A G + N V Y
Sbjct: 261 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ + + A + + PN Y ++ + + A +Y EM KG
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 181 ISPNVVTYNALI 192
+S V+ YN L+
Sbjct: 381 LSLTVILYNTLL 392
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 1/195 (0%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
V+ + + AI ME + P+LV + L++ C A V N+ R
Sbjct: 174 VMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR- 232
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAAL 135
F P + T++ L++G N+ +A + ++ G + V+Y +++ LCK G AL
Sbjct: 233 FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 292
Query: 136 EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
+R ++ + P +Y+ ++ + +N + A + + EM G+ +V +N+LI F
Sbjct: 293 GIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 196 CIVGQLKQAIGLLDE 210
C ++K +L E
Sbjct: 353 CKANRMKNVYRVLKE 367
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 1/203 (0%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
++ R TP ++ +L K + A + R+M G P +VT SI+++ C G+
Sbjct: 229 MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
A ++ ++ +PTT ++ L+ + A+ + G + + + +L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I CK L++++ + + PN N I+ L + A +++ +MI K
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVC 407
Query: 182 SPNVVTYNALIYGFCIVGQLKQA 204
P+ TY +I FC +++ A
Sbjct: 408 EPDADTYTMVIKMFCEKKEMETA 430
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P ++ FN +L++L K+K+ A + M TP T SIL+
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPN 252
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V ++ G P +T++ ++ LC G V AL + + Y
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 312
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++ A++ ++E + +V ++N++I + CK N + + + EM KG
Sbjct: 313 LVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKG 372
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
++PN + N ++ G+ +A +
Sbjct: 373 VTPNSKSCNIILRHLIERGEKDEAFDVF 400
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I+ ++ ++ L K A+ + R M+ + P+ S+L++ + + A
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRG---NVHRALQFHDVVLAQGFRLNQVSYGTLING 124
+ + G + F +LI C NV+R L+ + ++G N S ++
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK---EMKSKGVTPNSKSCNIILRH 386
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
L + GE A + R++ ++ P+ Y +I C+ + A ++ M KG+ P+
Sbjct: 387 LIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
+ T++ LI G C ++A LL+E
Sbjct: 446 MHTFSVLINGLCEERTTQKACVLLEE 471
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+ME +G+ + + LI C + + + VL + +G P + + +++ L RG
Sbjct: 332 EMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 391
Query: 95 NVHRALQ-FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMY 153
A F ++ + + +Y +I C+ E A + + + + + P++ +
Sbjct: 392 EKDEAFDVFRKMI--KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 449
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
+ +I+ LC++ AC L EMI GI P+ VT+ L
Sbjct: 450 SVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN ++ + K + ++M+ G+TP+ + +I++ G+ AF V ++
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 404
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
K +P T+T +IK C + + A + + +G + ++ LINGLC+ T
Sbjct: 405 K-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQ 463
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDN 164
A L ++ I P+ V + + L K+
Sbjct: 464 KACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 495
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+TP N +L L++ A + R+M I P T +++I C + +A
Sbjct: 373 VTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETAD 431
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V + K+G P+ TF+ LI GLC +A + ++ G R + V++G L L
Sbjct: 432 KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL 491
Query: 126 CKMGETSAALEFLRQ 140
K E L+FL +
Sbjct: 492 IK-EEREDVLKFLNE 505
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 80.9 bits (198), Expect = 6e-16, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLV--KTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYL 58
M M + P F ++T L K ++ A R+M +G P + + C C +
Sbjct: 739 MKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEV 798
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFR--LNQV 116
G T A S L ++ K GF P T+ ++ I+ LC G + AL ++ +G R L+Q
Sbjct: 799 GNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALS--ELASFEGERSLLDQY 855
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+YG++++GL + G+ AL+ + ++ P V +Y ++I K+ + +M
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQA 204
+ P+VVTY A+I G+ +G++++A
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEA 943
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 1/194 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ IT + + +L + K++ S++ M L+ C G+
Sbjct: 285 MMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGK 344
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ + + F L+KGLC + AL+ D++ + + V YG
Sbjct: 345 IKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGI 403
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+G + + S ALE I+ P V Y I+ L K CNL++EMI G
Sbjct: 404 IISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENG 463
Query: 181 ISPNVVTYNALIYG 194
I P+ V A++ G
Sbjct: 464 IEPDSVAITAVVAG 477
Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 35/188 (18%)
Query: 43 PSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRAL-- 100
P V SI I C +G+ A S LA+ T+ +++ GL RG++ +AL
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDK 876
Query: 101 -------------QFHDVVLAQGFRLNQ--------------------VSYGTLINGLCK 127
+ ++ F+ Q V+Y +I G
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+G+ A R +E + P+ Y+ I+ LC+ A L SEM+ KGI+P+ +
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTIN 996
Query: 188 YNALIYGF 195
+ + YG
Sbjct: 997 FRTVFYGL 1004
Score = 53.5 bits (127), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 91/226 (40%), Gaps = 41/226 (18%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N +L+ + ++ L +ME G + T +ILI+ + + V +
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGF--------------------- 111
K GF+ + +I+ LC+ G AL+F+ ++ +G
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 112 ----------RLNQVS----YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTII 157
R+ ++S +G L+ C G+ ALE +R+++ + + + + ++
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 158 DSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQ 203
LC+ N + A + M + + ++ +YG I G L+Q
Sbjct: 372 KGLCRANRMVDALEIVDIMKRRKLD------DSNVYGIIISGYLRQ 411
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 1/198 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N ++ SL A+ ++M GIT L T +L++C + S+ +++
Sbjct: 262 YNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMV 321
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ F L+K C+ G + AL+ + + L+ + L+ GLC+
Sbjct: 322 RICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMV 381
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
ALE + I + + + +Y II + N VS A + + G P V TY ++
Sbjct: 382 DALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIM 440
Query: 193 YGFCIVGQLKQAIGLLDE 210
+ Q ++ L +E
Sbjct: 441 QHLFKLKQFEKGCNLFNE 458
Score = 50.4 bits (119), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 61/134 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M ++ P + + ++ K K + ++ME PS+VT + +I + LG+
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A++ N+ +RG P T++ I LC AL+ +L +G + +++ T
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 121 LINGLCKMGETSAA 134
+ GL + G+ A
Sbjct: 1000 VFYGLNREGKHDLA 1013
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHY-STAISLSRQMEITGITPSLVTLSILINCHCYLG 59
ML+ TP N++L LV + Y A L + + G+ P+ + ++L+ C
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND 204
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A+ + +L+R P ++ LI+G C +G V+ A++ D +L +GF V
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF----VPDR 260
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
TLI GLC G ++L ++ + P+ + N ++ C V AC++ ++
Sbjct: 261 TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 320
Query: 180 GISPNVVTYNALIYGFC 196
G + + T+ +I C
Sbjct: 321 GETLHSDTWEMVIPLIC 337
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 48 LSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVL 107
L +L++ YL + AF + + G P T ++ L++ CL ++ A Q +L
Sbjct: 161 LDVLVSHRGYLQK---AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 108 AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVS 167
+ + SY LI G C+ G+ + A+E L + + +P+ T+I LC +
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFD 273
Query: 168 HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
EMI KG SP+ N L+ GFC G++++A +++
Sbjct: 274 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVE 315
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
VLA G+ T FT LIK V+ + + VL+ +++ + ++ L
Sbjct: 105 DVLAKHRSSGYPLTGEIFTYLIK-------VYAEAKLPEKVLSTFYKMLEFNFTPQPKHL 157
Query: 126 CKM--------GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
++ G A E + ++PN YN ++ + C ++ +S A L+ +M+
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + P+V +Y LI GFC GQ+ A+ LLD+
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 80.5 bits (197), Expect = 8e-16, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 88/180 (48%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
++ + ++M+ G+ ++ + + L G+ A ++ G +PT T+ ++
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
G L + AL+F + + +G + ++ T+ING C+ + A + +++G I P
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+VV Y T+I + V ++ EM GI PN TY+ L+ G C G++ +A +L
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL 383
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P +N +L + TA+ M+ GI+P T + +IN C +
Sbjct: 246 MVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + P+ +++TT+IKG V L+ + + + G N +Y T
Sbjct: 306 MDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIP-NVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
L+ GLC G+ A L+ + + I P + ++ ++ S K ++ A + M
Sbjct: 366 LLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATL 425
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ Y LI C +AI LLD
Sbjct: 426 NVPAEAGHYGVLIENQCKASAYNRAIKLLD 455
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 75/161 (46%)
Query: 50 ILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ 109
+LI + G + + + G + T ++ +L K + RG A ++ + ++++
Sbjct: 190 VLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE 249
Query: 110 GFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHA 169
G + +Y ++ G AL F ++ + I P+ +NT+I+ C+ + A
Sbjct: 250 GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEA 309
Query: 170 CNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
L+ EM I P+VV+Y +I G+ V ++ + + +E
Sbjct: 310 EKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEE 350
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 13/188 (6%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
+I P ++ + ++ + + + +M +GI P+ T S L+ C G+ A
Sbjct: 320 KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Query: 65 FSVLANILKRGFQPTTIT-FTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
++L N++ + P + F L+ G++ A + + YG LI
Sbjct: 380 KNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIE 439
Query: 124 GLCKMGETSAALEFLRQ-IEGQLII---------PNVVMYNTIIDSLCKDNLVSHACNLY 173
CK + A++ L IE ++I+ P+ YN II+ LC + + A L+
Sbjct: 440 NQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLF 497
Query: 174 SEMIVKGI 181
+++ +G+
Sbjct: 498 RQLMKRGV 505
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 10/177 (5%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+ME + P +I C GQT A + ++KRG Q LI+G G
Sbjct: 471 EMEPSAYNP-------IIEYLCNNGQTAKAEVLFRQLMKRGVQDQD-ALNNLIRGHAKEG 522
Query: 95 NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
N + + ++ +G +Y LI GE A L + +P+ ++
Sbjct: 523 NPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFR 582
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVK--GISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
++I+SL +D V A + MI K GI N+ ++ + G +++A+G +D
Sbjct: 583 SVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRID 639
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGIT--PSLVTLSILINCHCYL 58
M + P + +N ++ +L + ++ A L QM++ G P T +ILI+ +C
Sbjct: 191 MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
Query: 59 GQTT-----------SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVL 107
G T A + +L RGF P +T+ LI G C + RAL+ + +
Sbjct: 251 GMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMK 310
Query: 108 AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEG-QLIIPNVVMYNTIIDSLCKDNLV 166
+G NQV+Y + I E A+E +R ++ +P Y +I +L +
Sbjct: 311 TKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRA 370
Query: 167 SHACNLYSEMIVKGISPNVVTYN 189
+ A +L EM+ G+ P TY
Sbjct: 371 AEARDLVVEMVEAGLVPREYTYK 393
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 46 VTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDV 105
+++ L+ C G A + + + +P + T+I LC GN +A D
Sbjct: 166 ASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQ 225
Query: 106 VLAQGFRL--NQVSYGTLINGLCKMGETSA-----------ALEFLRQIEGQLIIPNVVM 152
+ GFR + +Y LI+ C+ G + A R++ + +P+VV
Sbjct: 226 MQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVT 285
Query: 153 YNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
YN +ID CK N + A L+ +M KG PN VTYN+ I + + +++ AI ++
Sbjct: 286 YNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMM 341
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
Query: 79 TTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFL 138
TT + T L+K L G V AL + + + +Y T+IN LC++G A L
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 139 RQIE--GQLIIPNVVMYNTIIDSLCKDNL-----------VSHACNLYSEMIVKGISPNV 185
Q++ G P+ Y +I S C+ + + A ++ EM+ +G P+V
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
VTYN LI G C ++ +A+ L ++
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFED 308
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/196 (25%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N +L+S K + AI L +MEI G+ P +VT + L++ + G + A +VL +
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
G +P+T + ++L++ + G++ H +L + TLI+ K G
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG--- 274
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
L + R + + N+V +N+++ L L+ A L M +GI P+ +T+N+L
Sbjct: 275 -YLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 193 YGFCIVGQLKQAIGLL 208
G+ +G+ ++A+ ++
Sbjct: 334 SGYATLGKPEKALDVI 349
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 101 QFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
Q H VL G N ++ N L M + LE R++ + N+ +N+I+ S
Sbjct: 110 QIHGYVLRLGLESNV----SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSY 165
Query: 161 CKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
K V A L EM + G+ P++VT+N+L+ G+ G K AI +L
Sbjct: 166 TKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 94/199 (47%), Gaps = 8/199 (4%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I+ +N +++ L A +L +ME GI P +T + L + + LG+ A V+
Sbjct: 291 IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIG 350
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ ++G P +++T + G GN AL+ + +G N + TL+ K+
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL----KIL 406
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM-IVKGI-SPNVVT 187
+ L +++ G + N++ + +L ++ + +L S + I GI + ++ +
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALV--DMYGKSGDLQSAIEIFWGIKNKSLAS 464
Query: 188 YNALIYGFCIVGQLKQAIG 206
+N ++ G+ + G+ ++ I
Sbjct: 465 WNCMLMGYAMFGRGEEGIA 483
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I + +L ++ K Y + S+ ++E +G + + +IN G A
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG---FRLNQVSYGTLING 124
L + + G PTT T+ TLIKG + G R+ + D++L +G N ++ L+
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC---KDNLVSHACNLYSEMIVK-G 180
CK + A E ++++E + P+ V YNTI + C K V + +M++K
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAESEVVEKMVMKEK 255
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAI 205
PN T ++ G+C G+++ +
Sbjct: 256 AKPNGRTCGIVVGGYCREGRVRDGL 280
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 27/231 (11%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P I FN ++ + K K A + ++ME G+ P VT + + C+ G+T A
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 66 S--VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
S V ++K +P T ++ G C G V L+F + N V + +LIN
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 124 GLCKMGETSAALE---------FLRQIE--GQL--------------IIPNVVMYNTIID 158
G ++ + E F ++E G + +V+ Y+T+++
Sbjct: 304 GFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMN 363
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ + A ++ EM+ G+ P+ Y+ L G+ + K+A LL+
Sbjct: 364 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLE 414
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILI---NCHCY 57
M +MR+ ++ FN ++ V+ M+ GI VTL++L+ N
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEV------------MDRDGIDE--VTLTLLLMSFNEEVE 331
Query: 58 L-GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
L G VL + + + IT++T++ G + +A Q ++ G + +
Sbjct: 332 LVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 391
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLII---PNVVMYNTIIDSLCKDNLVSHACNLY 173
+Y L G + E A E L LI+ PNVV++ T+I C + + A ++
Sbjct: 392 AYSILAKGYVRAKEPKKAEELLET----LIVESRPNVVIFTTVISGWCSNGSMDDAMRVF 447
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
++M G+SPN+ T+ L++G+ V Q +A +L
Sbjct: 448 NKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 482
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 51 LINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG 110
L+N G+ A +V + + G +P+ I++TTL+ + ++ V G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 111 FRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHAC 170
+L+ + + +IN + G A++ L +++ + P YNT+I +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 171 NLYSEMIVKG---ISPNVVTYNALIYGFCIVGQLKQA 204
L M+ +G + PN+ T+N L+ +C ++++A
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%)
Query: 79 TTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFL 138
T + T L+ L RG H A + G R + +SY TL+ + + + +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 139 RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIV 198
++E + + +N +I++ + + A +M G++P TYN LI G+ I
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 199 GQLKQAIGLLD 209
G+ +++ LLD
Sbjct: 164 GKPERSSELLD 174
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 97/196 (49%), Gaps = 2/196 (1%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P I +N +L +L K+ H AI L + ++ + + P L+T +ILIN C + S
Sbjct: 150 LVPGIDTYNILLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVD 208
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
++ + K G+ P +T+TT++K + + LQ + +G+ + + +++ L
Sbjct: 209 WMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSAL 268
Query: 126 CKMGETSAALEFLRQ-IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
K G A E + + + ++V YNT+++ KD + +L E+ +KG+ P+
Sbjct: 269 IKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPD 328
Query: 185 VVTYNALIYGFCIVGQ 200
T+ ++ G +G
Sbjct: 329 DYTHTIIVNGLLNIGN 344
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
G+ P ++T + LI + A++V + + G +P T+ +LI G ++R
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 100 LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQ-IEGQLIIPNVVMYNTIID 158
LQ D +L G + SY TL++ K+G A + L + I ++P + YN ++D
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFC 196
+LCK +A L+ + + + P ++TYN LI G C
Sbjct: 163 ALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLC 199
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P + +N +++ K + + L +M +G++P + + + L++C+ LG+
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 61 TTSAFSVL-ANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
AF +L +I G P T+ L+ LC G+ A++ + ++ + ++Y
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYN 192
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
LINGLCK + +R+++ PN V Y T++ K + L+ +M +
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
G + + A++ G+ ++A + E
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHE 283
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ R+ P ++ +N ++ L K++ + + R+++ +G TP+ VT + ++ + +
Sbjct: 180 LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRI 239
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGT 120
+ + K G+ ++ L G A + H++V + + VSY T
Sbjct: 240 EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNT 299
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+N K G A + L +IE + + P+ + I++ L A + + G
Sbjct: 300 LLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMG 359
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ P+VVT N LI G C G + +A+ L
Sbjct: 360 MQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
+ I+ +N +L K + L ++E+ G+ P T +I++N +G T A
Sbjct: 291 SQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEK 350
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
LA I + G QP+ +T LI GLC G+V RA++ + + ++ +Y ++++ LC
Sbjct: 351 HLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLC 406
Query: 127 KMGETSAALEFL 138
K G A + L
Sbjct: 407 KDGRLVCASKLL 418
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRL----NQVSYGTLINGLCKMGETSAALEFLRQIE 142
+ LC N+ RA + +L G RL + ++Y TLI G + A R++
Sbjct: 20 VNSLCKFRNLERA----ETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 143 GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLK 202
I P+V YN++I K+ +++ L+ EM+ G+SP++ +YN L+ + +G+
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 203 QAIGLLDE 210
+A +L E
Sbjct: 136 EAFKILHE 143
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 5/180 (2%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGI-TPSLVTLSILINCHCYLGQTTSAFSVLANILKR 74
V+++L+KT A ++ +G + +V+ + L+N + G + +L I +
Sbjct: 264 VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK 323
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
G +P T T ++ GL GN A + + G + + V+ LI+GLCK G A
Sbjct: 324 GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRA 383
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
+ +E + + Y +++ +LCKD + A L KG+ A++ G
Sbjct: 384 MRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSG 439
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 39/234 (16%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+I +N VL + + + A+ L ++ME GI+P LVT +ILI + LG+ +A ++
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRAL----------------------------- 100
+ G T+T +I GL G ++AL
Sbjct: 307 KMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK 366
Query: 101 ------QFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
+ H + + GF ++ V G N L M LE R++ + +V +N
Sbjct: 367 VINQGSEVHSIAVKMGF-IDDVLVG---NSLVDMYSKCGKLEDARKVFDSVKNKDVYTWN 422
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
++I C+ A L++ M + PN++T+N +I G+ G +A+ L
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVT-LSILINCHCY--LGQTT 62
IT + + +++ L+ A+ + R+M + G+ P+ VT +S + C C + Q +
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGS 372
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
S+ +K GF + +L+ G + A + D V + + ++ ++I
Sbjct: 373 EVHSI---AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMI 425
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG-I 181
G C+ G A E +++ + PN++ +NT+I K+ A +L+ M G +
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLL 208
N T+N +I G+ G+ +A+ L
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELF 512
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 44 SLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFH 103
+L T S +I + + + ++K G P F +++G G+V H
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 104 DVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKD 163
VV+ G +++ K GE A +F R++ + +V+ +N+++ + C++
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQN 260
Query: 164 NLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
A L EM +GISP +VT+N LI G+ +G+ A+ L+
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 88/205 (42%), Gaps = 5/205 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITG-ITPSLVTLSILINCHCYLG 59
M + P II +N +++ +K A+ L ++ME G + + T +++I + G
Sbjct: 444 MQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG 503
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ A + + F P ++T +L+ + H VL R N +
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL----RRNLDAIH 559
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+ N L S +E+ R I + +++ +N++I A L+++M +
Sbjct: 560 AVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQ 619
Query: 180 GISPNVVTYNALIYGFCIVGQLKQA 204
GI+PN T +++I ++G + +
Sbjct: 620 GITPNRGTLSSIILAHGLMGNVDEG 644
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 32/199 (16%)
Query: 44 SLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFH 103
+ T + +I +C G A+ + + +P IT+ T+I G G+ A+
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 104 DVVLAQG-FRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVV----------- 151
+ G + N ++ +I G + G+ ALE R+++ +PN V
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Query: 152 -----MYNTIIDSLCKDNLVS-HACN-------------LYSEMIVKGI-SPNVVTYNAL 191
M I + + NL + HA YS I G+ + +++T+N+L
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSL 596
Query: 192 IYGFCIVGQLKQAIGLLDE 210
I G+ + G A+ L ++
Sbjct: 597 IGGYVLHGSYGPALALFNQ 615
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 81/196 (41%), Gaps = 4/196 (2%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N +L K A R+M ++ + ++ +C G+ A ++ + K
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
G P +T+ LI G G A+ + G + ++ +I+GL G
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
AL+ R++ ++PN V + + + +++ ++S + G +V+ N+L+
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 194 GFCIVGQLKQAIGLLD 209
+ G+L+ A + D
Sbjct: 396 MYSKCGKLEDARKVFD 411
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHC----YLG------ 59
+ +N +L +L + + + ++ M+ G P+ + S+++ C+ YLG
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEN 585
Query: 60 -----QTTSAFSVLANIL--------------------KRGFQPTTITFTTLIKGLCLRG 94
Q ++ +L +L K G++P + F +++ + R
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLS-IFTRN 644
Query: 95 NVH-RALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMY 153
N++ +A + + G + V+Y +L++ + GE A E L+ +E + P++V Y
Sbjct: 645 NMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY 704
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQ 203
NT+I C+ L+ A + SEM +GI P + TYN + G+ +G +
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754
Score = 74.7 bits (182), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT-TSAFSVLANI 71
+ +L + +T Y AI L +M+ G +P+LVT +++++ +G++ VL +
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
+G + T +T++ G + A +F + + G+ V+Y L+ K G
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
+ AL L+++E + V YN ++ + + A + M KG+ PN +TY +
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 192 IYGFCIVGQLKQAIGLL 208
I + G+ +A+ L
Sbjct: 393 IDAYGKAGKEDEALKLF 409
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 80/169 (47%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P ++ FN +L+ + Y A + + G++P LVT + L++ + G+ A +
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + K +P +++ T+IKG C RG + A++ + +G R +Y T ++G
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTA 748
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
MG + + + + PN + + ++D C+ S A + S++
Sbjct: 749 MGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + +N +L K Y+ A+S+ ++ME VT + L+ + G + A V
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ + K+G P IT+TT+I G AL+ + G N +Y +++ L K
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACN-LYSEMIVKGISPNVV 186
++ ++ L ++ PN +NT++ +LC + + N ++ EM G P+
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 187 TYNALI--YGFC 196
T+N LI YG C
Sbjct: 493 TFNTLISAYGRC 504
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 75/171 (43%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
G P +V + +++ A +L +I + G P +T+ +L+ RG +A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 100 LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDS 159
+ + + + VSY T+I G C+ G A+ L ++ + I P + YNT +
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 160 LCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + ++ M PN +T+ ++ G+C G+ +A+ + +
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 76/177 (42%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
VL++ + A +++ G P VT + L+ G T A SVL + +
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAAL 135
++T+ L+ G A +++ +G N ++Y T+I+ K G+ AL
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 136 EFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
+ ++ +PN YN ++ L K + + + +M G SPN T+N ++
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Score = 60.8 bits (146), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 68/137 (49%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
++P ++ +N ++ V+ A + + +E + + P LV+ + +I C G A
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAV 721
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L+ + +RG +P T+ T + G G + + R N++++ +++G
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGY 781
Query: 126 CKMGETSAALEFLRQIE 142
C+ G+ S A++F+ +I+
Sbjct: 782 CRAGKYSEAMDFVSKIK 798
Score = 53.5 bits (127), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 83/191 (43%), Gaps = 1/191 (0%)
Query: 20 LVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPT 79
L + YS A L ++ + + + +++ + G+ A + + + G PT
Sbjct: 185 LGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPT 244
Query: 80 TITFTTLIKGLCLRGNVHRA-LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFL 138
+T+ ++ G R L D + ++G + ++ + T+++ + G A EF
Sbjct: 245 LVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFF 304
Query: 139 RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIV 198
+++ P V YN ++ K + + A ++ EM + VTYN L+ +
Sbjct: 305 AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRA 364
Query: 199 GQLKQAIGLLD 209
G K+A G+++
Sbjct: 365 GFSKEAAGVIE 375
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/233 (18%), Positives = 98/233 (42%), Gaps = 35/233 (15%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN ++++ + A + +M G + T + L+N G S +V++++
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 73 KRGFQPTTITFTTLIKGLCLRGN---VHRA-------------LQFHDVVLA-------- 108
+GF+PT +++ +++ GN + R + ++LA
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALA 613
Query: 109 -----------QGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTII 157
G++ + V + ++++ + A L I + P++V YN+++
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 158 DSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
D + A + + + P++V+YN +I GFC G +++A+ +L E
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 49 SILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLA 108
+I+I+ C G+ A ++ N+L G QP T+ +I+ L RA + + ++
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSL----GRAEKLYAEMIR 73
Query: 109 QGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSH 168
+G + ++Y ++I+GLCK + + A + + + +NT+I+ CK V
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTLINGYCKATRVKD 124
Query: 169 ACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
NL+ EM +GI NV+TY LI+GF VG A+ + E
Sbjct: 125 GMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 100/198 (50%), Gaps = 17/198 (8%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N ++ L K + A ++ + I+G+ P + T +++I LG+ A + A ++
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGR---AEKLYAEMI 72
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV--SYGTLINGLCKMGE 130
+RG P TIT+ ++I GLC + LAQ ++++ ++ TLING CK
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNK-----------LAQARKVSKSCSTFNTLINGYCKATR 121
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
+ ++ + I+ NV+ Y T+I + + A +++ EM+ G+ + +T+
Sbjct: 122 VKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRD 181
Query: 191 LIYGFCIVGQLKQAIGLL 208
++ C +L++A+ +L
Sbjct: 182 ILPQLCSRKELRKAVAML 199
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 105 VVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDN 164
V+ ++ Y +I+GLCK G+ A + + P+V YN +I + +
Sbjct: 4 VMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFS 59
Query: 165 LVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
+ A LY+EMI +G+ P+ +TYN++I+G C +L QA
Sbjct: 60 SLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA 99
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + P I +N ++ L K + A +S+ S T + LIN +C +
Sbjct: 71 MIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNTLINGYCKATR 121
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
++ + +RG IT+TTLI G G+ + AL +++ G + +++
Sbjct: 122 VKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRD 181
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVM 152
++ LC E A+ L Q + ++ NV +
Sbjct: 182 ILPQLCSRKELRKAVAMLLQ-KSSMVSNNVTL 212
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 78.2 bits (191), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 79/163 (48%)
Query: 48 LSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVL 107
L +++ C + +A SV+ + + GF +I C N+ AL F D +L
Sbjct: 286 LGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKML 345
Query: 108 AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVS 167
+G ++N V ++ CKM ALE ++ I + V YN D+L K V
Sbjct: 346 GKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVE 405
Query: 168 HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
A L EM +GI P+V+ Y LI G+C+ G++ A+ L+DE
Sbjct: 406 EAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 58 LGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS 117
LG+ AF +L + RG P I +TTLI G CL+G V AL D ++ G + ++
Sbjct: 401 LGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
Y L++GL + G LE +++ + PN V + II+ LC V A + +S +
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE 520
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQA 204
K P + + G+C G K+A
Sbjct: 521 QK--CPE--NKASFVKGYCEAGLSKKA 543
Score = 74.3 bits (181), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 83/177 (46%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A S+ +ME G + +I+ +C A L +L +G + + + +++
Sbjct: 302 AESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQ 361
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
C AL+ L++V Y + L K+G A E L++++ + I+P
Sbjct: 362 CYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVP 421
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
+V+ Y T+ID C V A +L EMI G+SP+++TYN L+ G G ++ +
Sbjct: 422 DVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVL 478
Score = 73.9 bits (180), Expect = 7e-14, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M R+ P K++ + K + A L M G+ P L T +I+I+ +C L +
Sbjct: 582 MSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNE 641
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A S+ ++ +RG +P +T+T L+ H H+ QG
Sbjct: 642 LQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEH-----HETCSVQG---------- 686
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++G+ A+ E LR+ I +VV Y +ID CK N + A L+ MI G
Sbjct: 687 ------EVGKRKAS-EVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSG 739
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P++V Y LI + G + A+ L+ E
Sbjct: 740 LEPDMVAYTTLISSYFRKGYIDMAVTLVTE 769
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 100/210 (47%), Gaps = 7/210 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ ++P +I +N +++ L + H + + +M+ G P+ VT S++I C+ +
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK 508
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +++ ++ + + +KG C G +A + + + L + Y
Sbjct: 509 VKEAEDFFSSLEQKCPENKA----SFVKGYCEAGLSKKA---YKAFVRLEYPLRKSVYIK 561
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L LC G A + L+++ + P M +I + CK N V A L+ M+ +G
Sbjct: 562 LFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERG 621
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P++ TY +I+ +C + +L++A L ++
Sbjct: 622 LIPDLFTYTIMIHTYCRLNELQKAESLFED 651
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 64/167 (38%), Gaps = 13/167 (7%)
Query: 56 CYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQ 115
C G A VL + +P +I C NV A D ++ +G +
Sbjct: 567 CIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDL 626
Query: 116 VSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSH------- 168
+Y +I+ C++ E A ++ + I P+VV Y ++D K + H
Sbjct: 627 FTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQG 686
Query: 169 ------ACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
A + E GI +VV Y LI C + L+QA L D
Sbjct: 687 EVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFD 733
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + FN +L +++ A L +M+ + P++VT LI +C + + A V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + + + F +I GL G + AL + V+Y +L+ CK
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ A + L+ + + + P YN K N NLY ++I G SP+ +T
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 188 YNALIYGFCIVGQLKQAI 205
Y+ ++ C G+L A+
Sbjct: 428 YHLILKMLCEDGKLSLAM 445
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 44 SLVTLSILINCHCYLGQTTSAFSVLANI---LKRGFQPTTITFTTLIKGLCLRGNVHRAL 100
L L +L++ C G A L I + + P+ F L+ G + +A
Sbjct: 211 ELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAE 270
Query: 101 QFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
+ + + A + V+YGTLI G C+M A+E L +++ + N +++N IID L
Sbjct: 271 KLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGL 330
Query: 161 CKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ +S A + V P +VTYN+L+ FC G L A +L
Sbjct: 331 GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKIL 378
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M +M I + FN ++ L + S A+ + + + P++VT + L+ C G
Sbjct: 313 MAEMEIN--FMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGD 370
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +L ++ RG PTT T+ K + + ++ G ++++Y
Sbjct: 371 LPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHL 430
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++ LC+ G+ S A++ ++++ + I P+++ +I LC+ ++ A + + +G
Sbjct: 431 ILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRG 490
Query: 181 ISPNVVTYNALIYGFCIVG 199
I P +T+ + G G
Sbjct: 491 IIPQYITFKMIDNGLRSKG 509
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 41 ITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTI---TFTTLIKGLCLRGNVH 97
++PSL ++N C + A+S++ + ++ + TF LI+ G V
Sbjct: 133 LSPSL--FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQ 190
Query: 98 RALQFHDVVL--------AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL---I 146
+A++ + A RL +V L++ LCK G A +L +I G +
Sbjct: 191 QAIRAFEFARSYEPVCKSATELRLLEV----LLDALCKEGHVREASMYLERIGGTMDSNW 246
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIG 206
+P+V ++N +++ + + A L+ EM + P VVTY LI G+C + +++ A+
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 207 LLDE 210
+L+E
Sbjct: 307 VLEE 310
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 13 FNKVLTSLVKTKHYSTAISLS----RQMEITGITPSLVTLSILINCHCYLGQTTSAFSVL 68
F+ V+ SL K + + A SL R E + + S T +LI + G A
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLV-SADTFIVLIRRYARAGMVQQAIRAF 196
Query: 69 ANILKRGFQPTTITFTTL------IKGLCLRGNVHRALQFHDVV---LAQGFRLNQVSYG 119
R ++P + T L + LC G+V A + + + + + + +
Sbjct: 197 E--FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFN 254
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
L+NG + + A + +++ + P VV Y T+I+ C+ V A + EM +
Sbjct: 255 ILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMA 314
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ N + +N +I G G+L +A+G+++
Sbjct: 315 EMEINFMVFNPIIDGLGEAGRLSEALGMME 344
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 71/169 (42%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I+ +N ++ + K A + + M G+ P+ T + +T ++
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+++ G P +T+ ++K LC G + A+Q + + +G + ++ LI+ LC+
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCR 472
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+ A E + IIP + + I + L + A L S M
Sbjct: 473 LEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 77.4 bits (189), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 78/148 (52%)
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
SA L ++ G P T + L K LC ++ ++++ ++G+ SY +I
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+ LCK G + L++++ + + P+V +YN +I++ CK ++ A L+ EM V+G
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCK 464
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLDE 210
N+ TYN LI G+ ++++ L D+
Sbjct: 465 MNLTTYNVLIRKLSEEGEAEESLRLFDK 492
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 5/206 (2%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +K+ +L + I + G L + S++I+ C G+ +++
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + K G P + LI+ C + A + D + +G ++N +Y LI L +
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV---KGISPN 184
GE +L ++ + I P+ +Y ++I+ LCK+ + A ++ + + K ++
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRR 539
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
V++ + C G +A LL E
Sbjct: 540 VLS--EFVLNLCSNGHSGEASQLLRE 563
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P + +N ++ + K + A L +M + G +L T ++LI G+ +
Sbjct: 428 LAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESL 487
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFR-LNQVSYGTLING 124
+ +L+RG +P + +LI+GLC + A++ + + + + + +
Sbjct: 488 RLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLN 547
Query: 125 LCKMGETSAALEFLRQIE 142
LC G + A + LR+ E
Sbjct: 548 LCSNGHSGEASQLLRERE 565
Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 1/194 (0%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
I ++ + SL ++ +S +L +Q++ I LI+ + SAF VL
Sbjct: 83 ISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEE 142
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
G + L+ GL G A + + +G LN + +G I C+ E
Sbjct: 143 AFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSE 202
Query: 131 TSAALEFLRQI-EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
T+ L + ++ + L I ++ I+ SLCK + A + E+ P+ + Y
Sbjct: 203 TNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYR 262
Query: 190 ALIYGFCIVGQLKQ 203
+ F + G L +
Sbjct: 263 VIAEAFVVTGNLYE 276
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
G P IT+T++I G C G + A + + LN V+Y ++ G+CK G+ A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 135 LEFLRQIE----GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
LE L ++E G LI PN V Y +I + C+ V A + M +G PN VT
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 191 LIYG 194
LI G
Sbjct: 315 LIQG 318
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 80 TITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLR 139
T+ + +I+ +G+++ A + G + ++Y ++ING C G+ A +
Sbjct: 165 TVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAK 224
Query: 140 QIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG----ISPNVVTYNALIYGF 195
++ + N V Y+ I++ +CK + A L +EM + ISPN VTY +I F
Sbjct: 225 EMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAF 284
Query: 196 CIVGQLKQAIGLLD 209
C ++++A+ +LD
Sbjct: 285 CEKRRVEEALLVLD 298
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQM-EITGITPSLVTLSILINCHCYLGQTTSAFS 66
P + N ++ ++ + K YS +ISL + + + I P++V+ + +IN HC G A
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 67 VLANILKRG-FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V +IL F P+++T+ L KGL G + A +L++G + Y LI G
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
+G+ A+EF +++ + + + ++ T ++ + A Y ++ K +
Sbjct: 298 LDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHP 357
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
T N L+ F G+ +A L +E
Sbjct: 358 PTGNVLLEVFLKFGKKDEAWALFNE 382
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 75/196 (38%), Gaps = 37/196 (18%)
Query: 17 LTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG- 75
+ SL++ A L+RQ + P++ T + +I + + + S+ K+
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG-FRLNQVSYGTLINGLCKMGETSAA 134
P +++ +I C GNV AL+ + +LA F + V+Y L GL + G A
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
LR EM+ KG + + YN LI G
Sbjct: 272 ASLLR-----------------------------------EMLSKGQAADSTVYNNLIRG 296
Query: 195 FCIVGQLKQAIGLLDE 210
+ +G +A+ DE
Sbjct: 297 YLDLGDFDKAVEFFDE 312
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYS-TAISLSRQMEITGITPSLVTLSILINCHCYLG 59
M + + P + + ++++ +TK S A +M+ G+ PS + + LI+ + G
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
A++ + K G +P+ T+T+++ G+ + ++ ++L + + +++Y
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN 559
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
TL++G K G A + + + + P+V+ YN ++++ + + L EM
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL 619
Query: 180 GISPNVVTYNALIYGFCIVGQLKQA 204
+ P+ +TY+ +IY F V K+A
Sbjct: 620 NLKPDSITYSTMIYAFVRVRDFKRA 644
Score = 70.5 bits (171), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P +N ++ + + +L R+ME G+ P++ + + LI+ + G+T
Sbjct: 410 LKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAY---GRTKKMS 466
Query: 66 SVLANILKR----GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+ A+ R G +P++ ++T LI + G +A + + +G + + +Y ++
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
++ + G+T +E + + + I + YNT++D K L A ++ SE G+
Sbjct: 527 LDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGL 586
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+V+TYN L+ + GQ + LL E
Sbjct: 587 QPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 1/184 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT-SAFSVLANI 71
+N ++ L ++ Y A + M+ + P VT +ILI G++ + + +
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
++G + + F L+K C G AL + +G R N + Y TL++ K
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
++ + + P+ YN ++D+ + L EM G+ PNV +Y L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 192 IYGF 195
I +
Sbjct: 456 ISAY 459
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 6/200 (3%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I+++ +L+ + A L R M G P+ ++LI C + + A V
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ + + +T+T L+ G C G + + D ++ +G ++++Y ++ K
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 128 MGETSAALEF---LRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
LE +RQIE P++ +YN +I CK V A L++EM G+SP
Sbjct: 405 KESFEECLELMEKMRQIEYH---PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPG 461
Query: 185 VVTYNALIYGFCIVGQLKQA 204
V T+ +I G G L +A
Sbjct: 462 VDTFVIMINGLASQGCLLEA 481
Score = 73.2 bits (178), Expect = 1e-13, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 12/210 (5%)
Query: 8 PPIIE---FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
P +IE F ++ AI + +M G P L++ C G A
Sbjct: 178 PQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDA 237
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ----GFRLNQVSYGT 120
+ ++ R F FT+L+ G C G + A VL Q GF + V Y
Sbjct: 238 AKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEA----KYVLVQMNEAGFEPDIVDYTN 292
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++G G+ + A + LR + + PN Y +I +LCK + + A ++ EM
Sbjct: 293 LLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE 352
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+VVTY AL+ GFC G++ + +LD+
Sbjct: 353 CEADVVTYTALVSGFCKWGKIDKCYIVLDD 382
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
F +L +L K A L M + +L + L+ C +G+ A VL +
Sbjct: 221 FGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMN 279
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ GF+P + +T L+ G G + A + +GF N Y LI LCK+
Sbjct: 280 EAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRME 339
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
A++ ++E +VV Y ++ CK + + +MI KG+ P+ +TY
Sbjct: 340 EAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTY 395
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 2/198 (1%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+KV+ L K+ Y+ A+ +ME + G+ + ++ L++ A V +
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+P TF LI G C A D++ F + V+Y + + CK G+
Sbjct: 267 D-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
E L ++ PNVV Y ++ SL K V+ A +Y +M G P+ Y++LI
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Query: 193 YGFCIVGQLKQAIGLLDE 210
+ G+ K A + ++
Sbjct: 386 HILSKTGRFKDAAEIFED 403
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 3/190 (1%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P FN ++ K + + A ++ M++T TP +VT + + +C G
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L + + G P +T+T ++ L V AL ++ + G + Y +LI+ L
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV---KGIS 182
K G A E + Q + +V++YNT+I + + A L M + S
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCS 448
Query: 183 PNVVTYNALI 192
PNV TY L+
Sbjct: 449 PNVETYAPLL 458
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 1/198 (0%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
I N ++ +LVK A + ++ I P T +ILI+ C + A +++
Sbjct: 240 IAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDL 298
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ F P +T+T+ ++ C G+ R + + + G N V+Y +++ L K +
Sbjct: 299 MKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQ 358
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
+ AL +++ +P+ Y+++I L K A ++ +M +G+ +V+ YN
Sbjct: 359 VAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNT 418
Query: 191 LIYGFCIVGQLKQAIGLL 208
+I + + A+ LL
Sbjct: 419 MISAALHHSRDEMALRLL 436
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 81/226 (35%), Gaps = 38/226 (16%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
TP ++ + + + K + + +M G P++VT +I+++ Q A
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEA 362
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
V + + G P +++LI L G A + + + QG R + + Y T+I+
Sbjct: 363 LGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Query: 125 LCKMGETSAALEFLRQIE---GQLIIPNVVMYNTI------------------------- 156
AL L+++E G+ PNV Y +
Sbjct: 423 ALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDV 482
Query: 157 ----------IDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
I LC V AC + E + KG+ P T L+
Sbjct: 483 SIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLV 528
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 91/195 (46%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P +N V+ + K A++ +M GI P VT + LI+CHC G+
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + + +RG P T+ +I + + + +QG N V++ T
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT 554
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L++ K G + A+E L +++ + P+ MYN +I++ + L A N + M G
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 614
Query: 181 ISPNVVTYNALIYGF 195
+ P+++ N+LI F
Sbjct: 615 LKPSLLALNSLINAF 629
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/193 (27%), Positives = 87/193 (45%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
Q I P +N +L VKT A S+ +ME G++P T S+LI+ + G+
Sbjct: 332 QSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWE 391
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
SA VL + QP + F+ L+ G RG + Q + + G + ++ Y +I
Sbjct: 392 SARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+ K A+ ++ + I P+ V +NT+ID CK A ++ M +G
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 183 PNVVTYNALIYGF 195
P TYN +I +
Sbjct: 512 PCATTYNIMINSY 524
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 93/210 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML I P + +N ++ K + A + ME G P T +I+IN + +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+L + +G P +T TTL+ G + A++ + + + G + + Y
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LIN + G + A+ R + + P+++ N++I++ +D + A + M G
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ P+VVTY L+ V + ++ + +E
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEE 679
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 83/177 (46%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +N ++ S + + L +M+ GI P++VT + L++ + G+ A
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
L + G +P++ + LI RG +A+ V+ + G + + ++ +LIN +
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
+ A L+ ++ + P+VV Y T++ +L + + +Y EMI+ G P+
Sbjct: 632 DRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 35/222 (15%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N ++ K+ S A+ L + TG++ TL +I+ G+T A ++ + +
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
G +P T + L+KG G + A + +G ++ +Y LI+ G +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 134 ALEFLRQIEGQLIIPNVVM-----------------------------------YNTIID 158
A L+++E + PN + YN +ID
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQ 200
+ K N + HA + M+ +GI P+ VT+N LI C G+
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 85/212 (40%), Gaps = 2/212 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+L + T + +N ++ + + A++L +M G V S++I +
Sbjct: 188 LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK 247
Query: 61 TTSA--FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
S + I + + +I G G+ +ALQ + A G +
Sbjct: 248 IDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATL 307
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
++I+ L G T A ++ I P YN ++ K + A ++ SEM
Sbjct: 308 VSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 367
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+G+SP+ TY+ LI + G+ + A +L E
Sbjct: 368 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKE 399
Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 63/134 (47%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P +N ++ + + A++ R M G+ PSL+ L+ LIN +
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 634
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
AF+VL + + G +P +T+TTL+K L + ++ ++ G + ++ +
Sbjct: 635 DAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSM 694
Query: 121 LINGLCKMGETSAA 134
L + L M +T A
Sbjct: 695 LRSALRYMKQTLRA 708
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 5 RITPPIIE---FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
R+ P + FN +L +L + K + A ++ ++ P L T +IL++ +
Sbjct: 172 RLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNILLSGWKSSEEA 230
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+ F + +G +P +T+ +LI C + +A + D + + + ++Y T+
Sbjct: 231 EAFFEEMKG---KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTV 287
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I GL +G+ A E L++++ P+V YN I + C + A L EM+ KG+
Sbjct: 288 IGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGL 347
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGL 207
SPN TYN + L ++ L
Sbjct: 348 SPNATTYNLFFRVLSLANDLGRSWEL 373
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Query: 48 LSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVL 107
+ L+ C T A +V + LK FQP TF L+ G + A F + +
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 108 AQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVS 167
+G + + V+Y +LI+ CK E A + + ++ + P+V+ Y T+I L
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 168 HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
A + EM G P+V YNA I FCI +L A L+DE
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDE 341
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 71/176 (40%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P ++ +N ++ K + A L +M TP ++T + +I +GQ A
Sbjct: 242 LKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAR 301
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
VL + + G P + I+ C+ + A + D ++ +G N +Y L
Sbjct: 302 EVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
+ + E ++ G +PN +I + V A L+ +M+VKG
Sbjct: 362 SLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 5/200 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINC--HCYLGQTTSAFSVLAN 70
F + + K A+ + M+ + T++ L++ LG+ VL +
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ---VLFD 288
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
LK F P +T+T L+ G C N+ A + + ++ QG + + V++ ++ GL + +
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRK 348
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
S A++ ++ + PNV Y +I CK + + A + +M+ G+ P+ Y
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
LI GF +L LL E
Sbjct: 409 LITGFGTQKKLDTVYELLKE 428
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 96/209 (45%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ R TP ++ + +L + ++ A + M G+ P +V ++++ +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKK 349
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+ A + + +G P ++T +I+ C + ++ A+++ D ++ G + + Y L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I G + E L++++ + P+ YN +I + + HA +Y++MI I
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 469
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P++ T+N ++ + + + + +E
Sbjct: 470 EPSIHTFNMIMKSYFMARNYEMGRAVWEE 498
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P I+ N +L L++++ S AI L M+ G P++ + +I+I C
Sbjct: 324 MIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A +++ G QP +T LI G + + + + +G + +Y
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI + A ++ I P++ +N I+ S ++ EMI KG
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I P+ +Y LI G G+ ++A L+E
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYLEE 533
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 92/191 (48%), Gaps = 1/191 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P F ++ K + + + R M+ G+ + T +I+I C C +
Sbjct: 208 MERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKK 267
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ A +++ ++ +P ++T++ LI G C N+ A+ +V++ G++ + Y T
Sbjct: 268 SAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFT 327
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI+ LCK G+ AL R+ + +P+ + +++ L + V A L + ++ +
Sbjct: 328 LIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA-VVKEK 386
Query: 181 ISPNVVTYNAL 191
+ NV +N +
Sbjct: 387 FTRNVDLWNEV 397
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQM-EITGITPSLVTLSILINCHCYLGQT 61
Q I + N +L + + K Y A + +M ++ GI P L T + +I C G T
Sbjct: 139 QYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGST 198
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+S++S++A + ++ +PT +F +I G + ++ G + +Y +
Sbjct: 199 SSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIM 258
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I LCK +++ A + + + PN V Y+ +I C + + A NL+ M+ G
Sbjct: 259 IQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGY 318
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ Y LI+ C G + A+ L E
Sbjct: 319 KPDSECYFTLIHCLCKGGDFETALILCRE 347
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 84/203 (41%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P + +N+++ L ++ S++ S+ +ME I P+ + ++I+ +
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V+ + + G T+ +I+ LC R A D V++ R N V+Y LI+G
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C A+ + P+ Y T+I LCK A L E + K P+
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 186 VTYNALIYGFCIVGQLKQAIGLL 208
L+ G ++ +A L+
Sbjct: 358 SVMKWLVNGLASRSKVDEAKELI 380
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 94/206 (45%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
R P +I ++ +++ ++SL +++ + + + SI++ G SA
Sbjct: 264 RCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSA 323
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
V +L+RGF + +T ++ C +G+V A + + G ++ LI G
Sbjct: 324 RKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGG 383
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
+ G LE+ + + ++P+ +N ++ S+ K V+ A + ++ I KG P+
Sbjct: 384 FARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPD 443
Query: 185 VVTYNALIYGFCIVGQLKQAIGLLDE 210
TY+ LI GF + QA+ L E
Sbjct: 444 EHTYSHLIRGFIEGNDIDQALKLFYE 469
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A L +ME +G++P T + LI G ++ RG P+ F ++K
Sbjct: 358 AERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVK 417
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
+ NV+RA + + +GF ++ +Y LI G + + AL+ ++E + + P
Sbjct: 418 SVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSP 477
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
++ ++I LC V M + I PN Y+ALI F +G A +
Sbjct: 478 GFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVY 537
Query: 209 DE 210
+E
Sbjct: 538 NE 539
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 87/192 (45%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
I ++ V+ + K +A + +M G + + ++ + C G A +L+
Sbjct: 305 IGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSE 364
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ + G P TF LI G G + L++ +V++ +G + ++ ++ + K+
Sbjct: 365 MEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIEN 424
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
+ A E L + + +P+ Y+ +I + N + A L+ EM + +SP + +
Sbjct: 425 VNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRS 484
Query: 191 LIYGFCIVGQLK 202
LI G C G+++
Sbjct: 485 LIVGLCTCGKVE 496
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 8/181 (4%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + ++P FN ++ + + M G+ PS + ++ +
Sbjct: 365 MEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIEN 424
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVV---LAQGFRLNQV 116
A +L + +GF P T++ LI+G ++ +AL+ F+++ ++ GF +
Sbjct: 425 VNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEV--- 481
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+ +LI GLC G+ A ++L+ ++ +LI PN +Y+ +I + K ++A +Y+EM
Sbjct: 482 -FRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Query: 177 I 177
I
Sbjct: 541 I 541
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%)
Query: 41 ITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRAL 100
I P+ +T+ I+I C G+ +L I + P+ I T+L+ + + ++
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 101 QFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSL 160
+L + ++ + Y ++ K G+ +A + ++ + N +Y +
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 161 CKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
C+ V A L SEM G+SP T+N LI GF G ++ +
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGL 394
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 31 SLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGL 90
SL EI+ TP + +L+ C+ + F V + GF + IT TLI
Sbjct: 152 SLLDTYEISSSTP--LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYS 209
Query: 91 CLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
+ ++ + + N+++ +I LCK G ++ L +I G+ +P+V
Sbjct: 210 SKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSV 269
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++ +++ + ++ + + +L +++K + + + Y+ ++Y G L A + DE
Sbjct: 270 IVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDE 329
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 74.3 bits (181), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
R P +T+TT++ G + RA Q + G N+++Y L+ G CK +
Sbjct: 446 RNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDR 505
Query: 134 ALEFLRQI-EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A + LR++ E I P+VV YN IID + + A ++EM +GI+P ++Y L+
Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 193 YGFCIVGQLKQAIGLLDE 210
F + GQ K A + DE
Sbjct: 566 KAFAMSGQPKLANRVFDE 583
Score = 63.9 bits (154), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 2/178 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQM-EITGITPSLVTLSILINCHCYLG 59
M +M + I +N +L K A L R+M E GI P +V+ +I+I+ +
Sbjct: 478 MARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILID 537
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG-FRLNQVSY 118
+ A + + RG PT I++TTL+K + G A + D ++ +++ +++
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAW 597
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
L+ G C++G A + +++ PNV Y ++ + + + A L+ E+
Sbjct: 598 NMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + + V+++ V A + +M G+ + +T ++L+ +C Q A +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 68 LANILK-RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
L + + G +P +++ +I G L + AL F + + +G ++SY TL+
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 127 KMGETSAALE-FLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
G+ A F + + +++ +N +++ C+ L+ A + S M G PNV
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 186 VTYNALIYG 194
TY +L G
Sbjct: 630 ATYGSLANG 638
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 106 VLAQGFRLNQVSYGTLINGLCKMG---ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK 162
+L + F + Y TL+ G K G +T+ LE +R+ + + P+ V Y T++ +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 163 DNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
L+ A + +EM G+ N +TYN L+ G+C Q+ +A LL E
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLRE 512
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 74.3 bits (181), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 87/180 (48%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A+ + ++M+ G++P T S++INC G +A + ++ +G P +TF +I
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
N AL+ + + GF+ ++V+Y ++ L G A +++ + +P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ +Y ++D K V A Y M+ G+ PNV T N+L+ F V ++ +A LL
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 21/221 (9%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + ++P ++ ++ L K H A L +M G TP+LVT +I+I H
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN 514
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS--- 117
+A + ++ GFQP +T++ +++ L G + A + V A+ R N V
Sbjct: 515 YETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA----EGVFAEMQRKNWVPDEP 570
Query: 118 -YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
YG L++ K G A ++ + + + PNV N+++ + + + +S A NL M
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Query: 177 IVKGISPNVVTYNALI-----------YGFCIVGQLKQAIG 206
+ G+ P++ TY L+ GFC GQL G
Sbjct: 631 LALGLHPSLQTYTLLLSCCTDARSNFDMGFC--GQLMAVSG 669
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ ++ +L + K + L +M G P+ VT + LI+ + A +V +
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G +P +T+ TLI G + A+ + + G + +Y +IN L K G
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL- 191
AA ++ GQ PN+V +N +I K A LY +M G P+ VTY+ +
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 192 -IYGFCIVGQLKQAIGLLDE 210
+ G C G L++A G+ E
Sbjct: 542 EVLGHC--GFLEEAEGVFAE 559
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Query: 13 FNKVLTSLVKTKHYS--TAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
++++L+S+ K K S I + T +P L ++++ G+ SVL
Sbjct: 217 YSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQ 276
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ +P + +T +++G+ + +A + D +L G + +Y INGLCK +
Sbjct: 277 MKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQND 336
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
AL+ + + PNVV YN +I +L K +S A L+ EM G++ N T++
Sbjct: 337 IEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDI 396
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
+I + V ++ A GLL+E
Sbjct: 397 MISAYIEVDEVVCAHGLLEE 416
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 76/173 (43%)
Query: 5 RITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
R+ P ++ + VL ++ + Y A L ++ + G+ P + T ++ IN C A
Sbjct: 281 RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGA 340
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
+++++ K G +P +T+ LIK L G++ RA + G N ++ +I+
Sbjct: 341 LKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISA 400
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
++ E A L + + +I LC+ L+ A L + ++
Sbjct: 401 YIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+ R +P + ++ V+ LV+ +S+ QM+ + P LV +I++
Sbjct: 244 KTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYP 303
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A + +L G P T+ I GLC + ++ AL+ + G N V+Y LI
Sbjct: 304 KADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILI 363
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
L K G+ S A +++E + N ++ +I + + + V A L E +
Sbjct: 364 KALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVF 423
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLL 208
+I C G + QA+ LL
Sbjct: 424 VKSSRIEEVISRLCEKGLMDQAVELL 449
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITG--ITPSLVTLSILINCHCYLGQTTSA 64
TP F V+ +L K+ S+ +E++ TP + + I + + G+ A
Sbjct: 71 TPQAYRF--VIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDV-IAAYGFSGRIEEA 127
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ----GFRLNQVSYGT 120
V I P+ T L+ L + ++L+ +L + G RL + ++G
Sbjct: 128 IEVFFKIPNFRCVPSAYTLNALLLVLVRK---RQSLELVPEILVKACRMGVRLEESTFGI 184
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC--KDNLVSHACNLYSEMIV 178
LI+ LC++GE A E +R + +I + +Y+ ++ S+C KD+ ++
Sbjct: 185 LIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRK 244
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
SP + Y ++ G+ K+ + +L++
Sbjct: 245 TRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQ 276
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 73.9 bits (180), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 86/180 (47%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A+ + ++M+ G++P T S++INC G +A + ++ +G P +T+ ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
N AL+ + + GF ++V+Y ++ L G A +++ + IP
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ +Y ++D K V A Y M+ G+ PNV T N+L+ F V ++ +A LL
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Score = 71.2 bits (173), Expect = 5e-13, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ ++ +L + K + L +M G P+ VT + LI+ + A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G +P +T+ TLI G + A+ + + A G + +Y +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL- 191
AA + ++ Q PN+V YN ++D K +A LY +M G P+ VTY+ +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 192 -IYGFCIVGQLKQAIGLLDE 210
+ G C G L++A + E
Sbjct: 547 EVLGHC--GYLEEAEAVFTE 564
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
++P ++ ++ L K H A L +M G TP+LVT +I+++ H +A
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ ++ GF+P +T++ +++ L G + A + + + ++ YG L++
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
K G A ++ + + + PNV N+++ + + N ++ A L M+ G+ P++
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Query: 186 VTYNALI-----------YGFCIVGQLKQAIG 206
TY L+ GFC GQL + G
Sbjct: 645 QTYTLLLSCCTDGRSKLDMGFC--GQLMASTG 674
Score = 64.7 bits (156), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ TP ++ +N ++ K ++Y A+ L R M+ G P VT SI++ + G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +V + ++ + P + L+ GNV +A Q++ +L G R N + +
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKD 163
L++ ++ + + A E L+ + + P++ Y T++ S C D
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTD 656
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.9 bits (180), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 86/180 (47%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A+ + ++M+ G++P T S++INC G +A + ++ +G P +T+ ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
N AL+ + + GF ++V+Y ++ L G A +++ + IP
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ +Y ++D K V A Y M+ G+ PNV T N+L+ F V ++ +A LL
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Score = 71.2 bits (173), Expect = 5e-13, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ ++ +L + K + L +M G P+ VT + LI+ + A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G +P +T+ TLI G + A+ + + A G + +Y +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL- 191
AA + ++ Q PN+V YN ++D K +A LY +M G P+ VTY+ +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 192 -IYGFCIVGQLKQAIGLLDE 210
+ G C G L++A + E
Sbjct: 547 EVLGHC--GYLEEAEAVFTE 564
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
++P ++ ++ L K H A L +M G TP+LVT +I+++ H +A
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ ++ GF+P +T++ +++ L G + A + + + ++ YG L++
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
K G A ++ + + + PNV N+++ + + N ++ A L M+ G+ P++
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Query: 186 VTYNALI-----------YGFCIVGQLKQAIG 206
TY L+ GFC GQL + G
Sbjct: 645 QTYTLLLSCCTDGRSKLDMGFC--GQLMASTG 674
Score = 64.7 bits (156), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ TP ++ +N ++ K ++Y A+ L R M+ G P VT SI++ + G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +V + ++ + P + L+ GNV +A Q++ +L G R N + +
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKD 163
L++ ++ + + A E L+ + + P++ Y T++ S C D
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTD 656
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.9 bits (180), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 86/180 (47%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A+ + ++M+ G++P T S++INC G +A + ++ +G P +T+ ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
N AL+ + + GF ++V+Y ++ L G A +++ + IP
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+ +Y ++D K V A Y M+ G+ PNV T N+L+ F V ++ +A LL
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Score = 71.2 bits (173), Expect = 5e-13, Method: Composition-based stats.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ ++ +L + K + L +M G P+ VT + LI+ + A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ G +P +T+ TLI G + A+ + + A G + +Y +IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL- 191
AA + ++ Q PN+V YN ++D K +A LY +M G P+ VTY+ +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 192 -IYGFCIVGQLKQAIGLLDE 210
+ G C G L++A + E
Sbjct: 547 EVLGHC--GYLEEAEAVFTE 564
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
++P ++ ++ L K H A L +M G TP+LVT +I+++ H +A
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+ ++ GF+P +T++ +++ L G + A + + + ++ YG L++
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
K G A ++ + + + PNV N+++ + + N ++ A L M+ G+ P++
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Query: 186 VTYNALI-----------YGFCIVGQLKQAIG 206
TY L+ GFC GQL + G
Sbjct: 645 QTYTLLLSCCTDGRSKLDMGFC--GQLMASTG 674
Score = 64.7 bits (156), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ TP ++ +N ++ K ++Y A+ L R M+ G P VT SI++ + G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +V + ++ + P + L+ GNV +A Q++ +L G R N + +
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKD 163
L++ ++ + + A E L+ + + P++ Y T++ S C D
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCCTD 656
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 95/209 (45%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ R TP ++ + +L + ++ A + M G+ P +V ++++ +
Sbjct: 289 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+ A + + +G P ++T +I+ C + ++ A+++ D ++ G + + Y L
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I G + E L++++ + P+ YN +I + + H +Y++MI I
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P++ T+N ++ + + + + DE
Sbjct: 469 EPSIHTFNMIMKSYFVARNYEMGRAVWDE 497
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 5/200 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINC--HCYLGQTTSAFSVLAN 70
F + + K A+ + M+ + T++ L++ LG+ VL +
Sbjct: 231 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ---VLFD 287
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
LK F P +T+T L+ G C N+ A + + ++ G + + V++ ++ GL + +
Sbjct: 288 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 347
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
S A++ ++ + PNV Y +I CK + + A + +M+ G+ P+ Y
Sbjct: 348 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 407
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
LI GF +L LL E
Sbjct: 408 LITGFGTQKKLDTVYELLKE 427
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P I+ N +L L+++ S AI L M+ G P++ + +I+I C
Sbjct: 323 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 382
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A +++ G QP +T LI G + + + + +G + +Y
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 121 LINGLC--KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
LI + KM E + + + I+ + I P++ +N I+ S ++ EMI
Sbjct: 443 LIKLMANQKMPEHGTRI-YNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIK 500
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
KGI P+ +Y LI G G+ ++A L+E
Sbjct: 501 KGICPDDNSYTVLIRGLISEGKSREACRYLEE 532
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 95/209 (45%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ R TP ++ + +L + ++ A + M G+ P +V ++++ +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+ A + + +G P ++T +I+ C + ++ A+++ D ++ G + + Y L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
I G + E L++++ + P+ YN +I + + H +Y++MI I
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Query: 182 SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P++ T+N ++ + + + + DE
Sbjct: 470 EPSIHTFNMIMKSYFVARNYEMGRAVWDE 498
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 5/200 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINC--HCYLGQTTSAFSVLAN 70
F + + K A+ + M+ + T++ L++ LG+ VL +
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ---VLFD 288
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
LK F P +T+T L+ G C N+ A + + ++ G + + V++ ++ GL + +
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 348
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
S A++ ++ + PNV Y +I CK + + A + +M+ G+ P+ Y
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
LI GF +L LL E
Sbjct: 409 LITGFGTQKKLDTVYELLKE 428
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ + P I+ N +L L+++ S AI L M+ G P++ + +I+I C
Sbjct: 324 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A +++ G QP +T LI G + + + + +G + +Y
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 121 LINGLC--KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
LI + KM E + + + I+ + I P++ +N I+ S ++ EMI
Sbjct: 444 LIKLMANQKMPEHGTRI-YNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIK 501
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
KGI P+ +Y LI G G+ ++A L+E
Sbjct: 502 KGICPDDNSYTVLIRGLISEGKSREACRYLEE 533
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+ EFN +L + + A S+ ++ + P + T++IL+ G T+
Sbjct: 176 VDEFNILLRAFCTEREMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAGDVTATELFYH 234
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
++KRGF+P ++T+ I G C + N AL+ + + F + TLI+G
Sbjct: 235 EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVAR 294
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A + +I + + P+ YN ++ SL K VS A + EM KGI P+ VT++
Sbjct: 295 NKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFH 354
Query: 190 ALIYG 194
++ G
Sbjct: 355 SMFIG 359
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 55 HCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRL 113
H Y+ S F ++ G +P L+KG L +V+ AL+ FH + +
Sbjct: 266 HVYMETVRSLFR---QMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEP 322
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
N +Y LI+GLC G T A E L +++G+ +PN YN+++++ + A
Sbjct: 323 NSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCL 382
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
EMI G + ++Y L+ C G+ +A LL+
Sbjct: 383 WEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE 418
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLG 59
M+ I P + N ++ V + H + A+ + QM + P+ T LI+ C G
Sbjct: 279 MVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQG 338
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+T +A +L+ + +GF P ++ +L+ L G + A++ ++ G ++ +SY
Sbjct: 339 RTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYR 398
Query: 120 TLINGLCKMGETSAA---LEFLRQIEGQLIIPNVVMYNTIIDSLCKD 163
TL++ C+ G+ A LE LR E QL+ + Y+ +++ L KD
Sbjct: 399 TLVDESCRKGKYDEATRLLEMLR--EKQLV--DRDSYDKLVNVLHKD 441
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 13/145 (8%)
Query: 77 QPTTITFTTLIKGLCLRGNVH----------RALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+PT T+ L K L RGN R+L F +V G + + L+ G
Sbjct: 242 RPTIRTYHILFKALLGRGNNSYINHVYMETVRSL-FRQMV-DSGIEPDVFALNCLVKGYV 299
Query: 127 KMGETSAALEFLRQIEGQLII-PNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
+ AL Q+ PN Y+ +I LC +A L SEM KG PN
Sbjct: 300 LSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNG 359
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
+YN+L+ F + G++ A+ L E
Sbjct: 360 KSYNSLVNAFALSGEIDDAVKCLWE 384
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 1/190 (0%)
Query: 15 KVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKR 74
K++ + A+ + ++ G+ + ++++L++ C + A VL LK
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKS 218
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
P TF I G C V AL + GFR +SY T+I C+ E
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV 278
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
E L ++E PN + Y TI+ SL A + + M G P+ + YN LI+
Sbjct: 279 YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 338
Query: 195 FCIVGQLKQA 204
G+L++A
Sbjct: 339 LARAGRLEEA 348
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ ITP FN + K A+ ++M+ G P +++ + +I C+C +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+ +L+ + G P +IT+TT++ L + AL+ + G + + + Y L
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIP-NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
I+ L + G A R +L + N YN++I C + A L EM
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 181 I-SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ +P+V TY L+ G + + LL E
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKE 426
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 1/190 (0%)
Query: 15 KVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKR 74
K++ + A+ + ++ G+ + ++++L++ C + A VL LK
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKS 218
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
P TF I G C V AL + GFR +SY T+I C+ E
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV 278
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
E L ++E PN + Y TI+ SL A + + M G P+ + YN LI+
Sbjct: 279 YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 338
Query: 195 FCIVGQLKQA 204
G+L++A
Sbjct: 339 LARAGRLEEA 348
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
Query: 2 LQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQT 61
L+ ITP FN + K A+ ++M+ G P +++ + +I C+C +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 62 TSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTL 121
+ +L+ + G P +IT+TT++ L + AL+ + G + + + Y L
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 122 INGLCKMGETSAALEFLRQIEGQLIIP-NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
I+ L + G A R +L + N YN++I C + A L EM
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 181 I-SPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ +P+V TY L+ G + + LL E
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKE 426
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I F+ V+ SL + ++ A +L M G P +++++ G A VL
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ RG +P T+T +I G G + A + + +L+ V+Y LI G CK+
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIE 491
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACN-LYSEMIVKGISPNVVT 187
E AL+ L +++ + PN YN +I S C L L+ EM KG+ N ++
Sbjct: 492 EYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Query: 31 SLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGL 90
LS + GI P S +I+ C + A ++L +++ +G P F ++
Sbjct: 362 DLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHAC 417
Query: 91 CLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
G++ A + ++ ++G + + +Y +I+G K G A E L + + + +
Sbjct: 418 SKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP 477
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCI 197
V Y+ +I CK A L +EM G+ PN YN LI FC+
Sbjct: 478 VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL 524
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 40/243 (16%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
TP + L +L K A S+ +M +G+ + +I C G+ A+
Sbjct: 262 FTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAY 321
Query: 66 SV--LANILKRGFQPTTITFTTLIKGLC---------------LRGNVHRA--LQFHDVV 106
SV LA ++ P + TLI LC L G R F DV+
Sbjct: 322 SVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVI 379
Query: 107 ----------LAQGFRLNQVSYGT---------LINGLCKMGETSAALEFLRQIEGQLII 147
A+ L+ +S G +++ K G+ A E L+ +E + +
Sbjct: 380 HSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLK 439
Query: 148 PNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGL 207
P+V Y II K ++ A + +E K + VTY+ALI G+C + + +A+ L
Sbjct: 440 PDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKL 499
Query: 208 LDE 210
L+E
Sbjct: 500 LNE 502
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 1/197 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
N+++ K A + + E G TP+ T + + C A SV +L
Sbjct: 234 LNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKML 293
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK-MGET 131
K G +I C G A +++ + L TLI LCK G
Sbjct: 294 KSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTI 353
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
+ A E L + G+ + ++ +I SLC+ V A L +MI KG +P +N +
Sbjct: 354 TFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLV 413
Query: 192 IYGFCIVGQLKQAIGLL 208
++ G L +A +L
Sbjct: 414 VHACSKTGDLDEAKEVL 430
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 13/172 (7%)
Query: 44 SLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFH 103
+L L+ LI LG++ +AF V + + GF P T+ ++ LC R + A
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 104 DVVLAQGFRLNQVSYGTLINGLCKMGETSAALEF--LRQIEGQLIIPNVVMYNTIIDSLC 161
+ +L G G +I CK G+ A L + + + + P V T+I +LC
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALC 347
Query: 162 K-DNLVSHA----CNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
K D ++ A +L E +GI P ++ +I+ C + +K A LL
Sbjct: 348 KNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALL 395
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 72.0 bits (175), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 87/183 (47%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++E+N ++ + K K + A+SL + M+ G P T + L + A +LA
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+L G +P T+ +I G + A+ ++ + G + N+V YG+LING + G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A+++ R +E + N ++ ++I + K + A +Y +M P+V N
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN 694
Query: 190 ALI 192
+++
Sbjct: 695 SML 697
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +N + L A + +M +G P T + +I + LG + A +
Sbjct: 548 PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDL 607
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ K G +P + + +LI G G V A+Q+ ++ G + N + +LI K
Sbjct: 608 YEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSK 667
Query: 128 MG---ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKD-NLVSHACNLYSEMIVKGISP 183
+G E + ++ EG P+V N+++ SLC D +VS A ++++ + KG +
Sbjct: 668 VGCLEEARRVYDKMKDSEGG---PDVAASNSML-SLCADLGIVSEAESIFNALREKG-TC 722
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLLDE 210
+V+++ ++Y + +G L +AI + +E
Sbjct: 723 DVISFATMMYLYKGMGMLDEAIEVAEE 749
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 46/247 (18%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML+ + + FN ++ + H S A SL ++ME GI+P T +IL++ H G
Sbjct: 331 MLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGD 390
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG-------------------------- 94
+A I K G P T+T ++ LC R
Sbjct: 391 IEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPV 450
Query: 95 ----NVHRALQFHDVVLAQGFRLNQV----SYGTLINGLCKMG---ETSAALEFLRQIEG 143
V+ L L + F+L+ V + +I+ + G E R + G
Sbjct: 451 IMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSG 510
Query: 144 QLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQ 203
Q +V+ YN +I + K L A +L+ M +G P+ TYN+L Q+
Sbjct: 511 QR--NDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLF-------QMLA 561
Query: 204 AIGLLDE 210
+ L+DE
Sbjct: 562 GVDLVDE 568
Score = 54.3 bits (129), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 63/130 (48%)
Query: 47 TLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVV 106
T + LI+ + G+ A ++ + +LK G T+TF T+I G++ A +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 107 LAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLV 166
+G + +Y L++ G+ AALE+ R+I + P+ V + ++ LC+ +V
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 167 SHACNLYSEM 176
+ + +EM
Sbjct: 427 AEVEAVIAEM 436
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 80 TITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLR 139
T TF TLI G ++ A +L G ++ V++ T+I+ G S A L+
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 140 QIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFC--- 196
++E + I P+ YN ++ + A Y ++ G+ P+ VT+ A+++ C
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 197 IVGQLKQAIGLLD 209
+V +++ I +D
Sbjct: 425 MVAEVEAVIAEMD 437
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 71.6 bits (174), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 59 GQTTSAFSVLANILKRG------FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFR 112
G +A S+ + +R F P T+ +LI LCL G AL D + G
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 113 LNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNL 172
+ +Y LI G CK A+ +++ +P+ ++YN ++D K V+ AC L
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 173 YSEMIVKGISPNVVTYNALIYGF 195
+ +M+ +G+ + TYN LI G
Sbjct: 382 FEKMVQEGVRASCWTYNILIDGL 404
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 85/188 (45%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +N ++ L A+ + +++++G P T ILI C + A +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ GF P TI + L+ G V A Q + ++ +G R + +Y LI+GL +
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G A ++ + + + ++ + LC++ + A L EM +G S ++VT
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 188 YNALIYGF 195
++L+ GF
Sbjct: 467 ISSLLIGF 474
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 63/126 (50%)
Query: 79 TTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFL 138
T+ T+ +++ +G A D + + +Y +I GL KMG A L
Sbjct: 629 TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 139 RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIV 198
++ Q ++VMYNT+I++L K + A L+ M GI+P+VV+YN +I
Sbjct: 689 DRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 199 GQLKQA 204
G+LK+A
Sbjct: 749 GKLKEA 754
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 29 AISLSRQMEI------TGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTIT 82
A+SL ++M+ + P + T + LI+ C G+ A V + G +P T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 83 FTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIE 142
+ LI+G C + A++ + + GF + + Y L++G K + + A + ++
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 143 GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLK 202
+ + + YN +ID L ++ L+ ++ KG + +T++ + C G+L+
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 203 QAIGLLDE 210
A+ L++E
Sbjct: 447 GAVKLVEE 454
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 77/155 (49%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +N +L +K + + A L +M G+ S T +ILI+ G+ + F++
Sbjct: 357 PDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTL 416
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
++ K+G ITF+ + LC G + A++ + + +GF ++ V+ +L+ G K
Sbjct: 417 FCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHK 476
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK 162
G + ++ I ++PNV+ +N +++ K
Sbjct: 477 QGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLK 511
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N +++S VK ++ TA + QM + T +++I +G+ A +VL +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
K+G + + TLI L + A Q D + + G + VSY T+I K G+
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKD 163
A ++L+ + +PN V +TI+D L K+
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT-DTILDYLGKE 782
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 57/135 (42%)
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
G +A VL + + T+ +I+GL G A D + QG L+ V Y
Sbjct: 644 GYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMY 703
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
TLIN L K A + ++ I P+VV YNT+I+ K + A M+
Sbjct: 704 NTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 763
Query: 179 KGISPNVVTYNALIY 193
G PN VT L Y
Sbjct: 764 AGCLPNHVTDTILDY 778
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 34/223 (15%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITG--ITPSLV--TLSILINCHCYLGQTTSAFSVLANI 71
+L SL+++ + +A+ + ME G + PS+ L L+ H + A S+L +
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKH----ELRLALSILFKL 188
Query: 72 LKRG---------------FQPTTITFTTLIKGLC---LRGNVHRALQFHDVVLAQGFRL 113
L+ + P T+ L+ GL +R R F + + F+
Sbjct: 189 LEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRV--FEKLKGMKRFKF 246
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIE------GQLIIPNVVMYNTIIDSLCKDNLVS 167
+ SY I+G G+ AAL ++++ G P++ YN++I LC
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 168 HACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
A ++ E+ V G P+ TY LI G C ++ A+ + E
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGE 349
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N +L +L K + A +L R+M G+ P T +IL+N C G+ A L +
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+RGF P LI+GL G + A + + GF + ++ LI + K GE
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVE 304
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
+E + ++ Y T+I ++ K + A L + + G P Y +I
Sbjct: 305 FCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPII 364
Query: 193 YGFCIVGQLKQAIGLLDE 210
G C G A +
Sbjct: 365 KGMCRNGMFDDAFSFFSD 382
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 36/239 (15%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILI-----NCH------ 55
TP +E+ ++ SL K Y + + +QM+ + S TL +I N H
Sbjct: 108 TPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVE 167
Query: 56 -------------------------CYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGL 90
C + A++++ ++++G +P T+ L+ G
Sbjct: 168 LFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 91 CLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
C G + A +F D + +GF LI GL G +A E + ++ +P++
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+N +I+++ K V +Y G+ ++ TY LI +G++ +A LL+
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLN 346
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLN-QVSYGTL---INGLCKMGET 131
+ PT++ + L K L H+ + +L Q L+ +S TL I K G
Sbjct: 107 YTPTSMEYEELAKSLA----SHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHV 162
Query: 132 SAALEFLRQIEGQLIIPNVV-MYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
A+E + L V +YN+++ +LC + A L MI KG+ P+ TY
Sbjct: 163 DQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAI 222
Query: 191 LIYGFCIVGQLKQAIGLLDE 210
L+ G+C G++K+A LDE
Sbjct: 223 LVNGWCSAGKMKEAQEFLDE 242
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 69/183 (37%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + PP + ++ L+ + +A + +M G P + T +ILI G+
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+ K G T+ TLI + G + A + + + G + Y
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 362
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I G+C+ G A F ++ + PN +Y +I + A N EM G
Sbjct: 363 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 422
Query: 181 ISP 183
+ P
Sbjct: 423 LVP 425
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 3/200 (1%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQM--EITGITPSLVTLSILINCHCYLGQTTSAFSVL 68
+ FN +L + + +K++ L ++ I P ++ ILI +C G A ++
Sbjct: 138 VSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIM 197
Query: 69 ANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
+ +G + TTI FTT++ L +G + A + ++ +G L+ +Y I K
Sbjct: 198 RQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKE 257
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
E + ++ + P+ + YN ++ + C+ ++ A +Y + +PN T+
Sbjct: 258 SPERVK-ELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATF 316
Query: 189 NALIYGFCIVGQLKQAIGLL 208
LI+ C +Q +
Sbjct: 317 RTLIFHLCYSRLYEQGYAIF 336
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 36/192 (18%)
Query: 49 SILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLA 108
S LI + A + + G + ++F L+ N + Q D +
Sbjct: 106 STLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQ 165
Query: 109 QGFRL--NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLV 166
+ ++ +++SYG LI C G A+E +RQ++G+ + + + TI+ SL K +
Sbjct: 166 RYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGEL 225
Query: 167 SHACNLYSEMIVK----------------------------------GISPNVVTYNALI 192
A NL++EM+ K G+ P+ ++YN L+
Sbjct: 226 EVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLM 285
Query: 193 YGFCIVGQLKQA 204
+C G L +A
Sbjct: 286 TAYCERGMLDEA 297
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 1/198 (0%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTL-SILINCHCYLGQTTSAFSVLANIL 72
N +L+ LVK + I L QM+ G+ P +VT ++L C A ++ +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
G Q ++ + T++ G A F + +G N Y +L+N G+
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A E + +++ ++PN VM T++ K L + L SE+ G + N + Y L+
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 193 YGFCIVGQLKQAIGLLDE 210
G G+L++A + D+
Sbjct: 350 DGLSKAGKLEEARSIFDD 367
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 3/196 (1%)
Query: 3 QMRI---TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLG 59
QM++ +P I ++ +L S Y A L +M+ G+ P+ V ++ L+ + G
Sbjct: 262 QMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGG 321
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ +L+ + G+ + + L+ GL G + A D + +G R + +
Sbjct: 322 LFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANS 381
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+I+ LC+ A E R E ++VM NT++ + C+ + + +M +
Sbjct: 382 IMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQ 441
Query: 180 GISPNVVTYNALIYGF 195
+SP+ T++ LI F
Sbjct: 442 AVSPDYNTFHILIKYF 457
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 82/177 (46%)
Query: 34 RQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLR 93
+QM++ G +P++ S L+N + + G A ++ + G P + TTL+K
Sbjct: 261 QQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKG 320
Query: 94 GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMY 153
G R+ + + + G+ N++ Y L++GL K G+ A ++G+ + +
Sbjct: 321 GLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYAN 380
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ +I +LC+ A L + ++V N ++ +C G+++ + ++ +
Sbjct: 381 SIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKK 437
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 1/203 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKH-YSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSA 64
+ P ++ +N +L +K K+ Y AI L ++ GI V ++ G++ A
Sbjct: 197 LKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEA 256
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
+ + + G P +++L+ +G+ +A + + + G N+V TL+
Sbjct: 257 ENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKV 316
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
K G + E L ++E N + Y ++D L K + A +++ +M KG+ +
Sbjct: 317 YIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376
Query: 185 VVTYNALIYGFCIVGQLKQAIGL 207
+ +I C + K+A L
Sbjct: 377 GYANSIMISALCRSKRFKEAKEL 399
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 88/189 (46%), Gaps = 7/189 (3%)
Query: 29 AISLSRQMEITGITPSLVTL------SILINCHCYLGQTTSAFSVLANILKRGFQPTTIT 82
A ++S+ +EI P T + +++C G+ S + + + G +P +T
Sbjct: 144 AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVT 203
Query: 83 FTTLIKG-LCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQI 141
+ TL+ G + ++ +A++ + G +++ V YGT++ G + A F++Q+
Sbjct: 204 YNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQM 263
Query: 142 EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
+ + PN+ Y+++++S A L +EM G+ PN V L+ + G
Sbjct: 264 KVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLF 323
Query: 202 KQAIGLLDE 210
++ LL E
Sbjct: 324 DRSRELLSE 332
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P ++ + ++ + + + A+S+ +M G+ P+ +IL++ G
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +V ++ + P ++TT++ ++ A +F + GF N V+YGT
Sbjct: 372 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 431
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G K + +E ++ I N + TI+D+ + A Y EM G
Sbjct: 432 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 491
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGL 207
+ P+ N L+ +L++A L
Sbjct: 492 VPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 77/189 (40%), Gaps = 3/189 (1%)
Query: 22 KTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTI 81
K +Y A + M G+ S VT + L++ + + + + + QP +
Sbjct: 266 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVV 322
Query: 82 TFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQI 141
++ LIK AL + +L G R +Y L++ G A + +
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 142 EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
I P++ Y T++ + + + A + + V G PN+VTY LI G+ +
Sbjct: 383 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 442
Query: 202 KQAIGLLDE 210
++ + + ++
Sbjct: 443 EKMMEVYEK 451
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 98/232 (42%), Gaps = 41/232 (17%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
I+F ++T+ K +++ A + + G TP++++ + L+ + G+ +A ++
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 71 ILKRGFQPTTITF----TTLIKGLCLR--------------------------------- 93
+ G +P+ IT+ T ++G +
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 94 -GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVM 152
GN +A + ++ +G + V+Y +L++ E S + Q++ I P+VV
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVS 323
Query: 153 YNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
Y +I + + A +++ EM+ G+ P YN L+ F I G ++QA
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 375
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + I P ++ + ++ + + + A+S+ +M G+ P+ +IL++ G
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +V ++ + P ++TT++ ++ A +F + GF N V+YGT
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
LI G K + +E ++ I N + TI+D+ + A Y EM G
Sbjct: 425 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 484
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGL 207
+ P+ N L+ +L++A L
Sbjct: 485 VPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 3/182 (1%)
Query: 22 KTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTI 81
K +Y A + M G+ S VT + L++ + + + + + QP +
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---RSDIQPDVV 315
Query: 82 TFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQI 141
++ LIK AL + +L G R +Y L++ G A + +
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 142 EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
I P++ Y T++ + + + A + + V G PN+VTY LI G+ +
Sbjct: 376 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 435
Query: 202 KQ 203
++
Sbjct: 436 EK 437
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 98/232 (42%), Gaps = 41/232 (17%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
I+F ++T+ K +++ A + + G TP++++ + L+ + G+ +A ++
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 71 ILKRGFQPTTITF----TTLIKGLCLR--------------------------------- 93
+ G +P+ IT+ T ++G +
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 94 -GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVM 152
GN +A + ++ +G + V+Y +L++ E S + Q++ I P+VV
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVS 316
Query: 153 YNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
Y +I + + A +++ EM+ G+ P YN L+ F I G ++QA
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 368
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 3/183 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M R+ ++ +N V+ ++ ++ I + R+M G P++ T + +I C G+
Sbjct: 250 MKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR 309
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ +L + KRG QP +IT+ L L + L ++ G R +Y
Sbjct: 310 MRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVM 366
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ + G L + ++ P+ YN +ID+L + ++ A EMI +G
Sbjct: 367 LMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
Query: 181 ISP 183
+SP
Sbjct: 427 LSP 429
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 70 NILKRGFQPTTITFTTLI-KGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
N++ GF + LI +G G + ++ + +G + SY ++ +CK
Sbjct: 178 NVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKS 237
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
G+ A++ ++++ + + +VV YNT+I ++ V ++ EM +G PNV T+
Sbjct: 238 GKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATH 297
Query: 189 NALIYGFCIVGQLKQAIGLLDE 210
N +I C G+++ A +LDE
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLDE 319
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 3/189 (1%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N +L K + ++M+ G+T L + SI ++ C G+ A + +
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
R + + + T+I+ + V ++ + +G N ++ T+I LC+ G
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A L ++ + P+ + Y + L K S +L+ MI G+ P + TY L+
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCLFSRLEK---PSEILSLFGRMIRSGVRPKMDTYVMLMR 369
Query: 194 GFCIVGQLK 202
F G L+
Sbjct: 370 KFERWGFLQ 378
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
I +N + SL + + ++ +M G+ +T S +I C A
Sbjct: 187 IFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFER 246
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGE 130
+ K G P +T++ ++ G V L ++ +A G++ + +++ L + G+
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 131 TSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
L++++ + PNVV+YNT+++++ + A +L++EM+ G++PN T A
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 191 L--IYG 194
L IYG
Sbjct: 367 LVKIYG 372
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 1/201 (0%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+ FN +L + V +K + + +++ I P + + + LI C G T A +++
Sbjct: 142 LSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALID 201
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
I +G +P ITF L+ +G Q ++ + + + SY + GL
Sbjct: 202 EIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMEN 261
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
++ + +++G + P+V + +I + + A Y E+ G P +N
Sbjct: 262 KSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFN 321
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
+L+ C G L+ A L E
Sbjct: 322 SLLPAICKAGDLESAYELCKE 342
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/202 (17%), Positives = 84/202 (41%), Gaps = 35/202 (17%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
++ I P + +N ++ L ++ A++L ++E G+ P +T +IL++ G+
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 63 SAFSVLANILKRG-----------------------------------FQPTTITFTTLI 87
+ A ++++ +P TFT +I
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 88 KGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLII 147
KG G + A+ ++ + G R + + +L+ +CK G+ +A E ++I + ++
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Query: 148 PNVVMYNTIIDSLCKDNLVSHA 169
+ + ++D+L K + A
Sbjct: 350 VDEAVLQEVVDALVKGSKQDEA 371
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+RG T+T+TTLI+GL G+ A + +++ G + ++Y L++GLCK G+
Sbjct: 9 QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLE 68
Query: 133 AALEFLRQIEG---------QLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
AL + +G + + PNVV Y T+I CK A L+ +M G P
Sbjct: 69 KALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLP 128
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ TYN LI G + L+ E
Sbjct: 129 DSGTYNTLIRAHLRDGDKAASAELIKE 155
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 9/169 (5%)
Query: 30 ISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKG 89
+ L R+M G+ + VT + LI G A + ++ G P +T+ L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 90 LCLRGNVHRALQFHDVVLA---------QGFRLNQVSYGTLINGLCKMGETSAALEFLRQ 140
LC G + +AL V +G + N V+Y T+I+G CK G A R+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 141 IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
++ +P+ YNT+I + +D + + L EM + + TY
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
+E R++ + ++ N V Y T+I L + A ++ EM+ G+ P+++TYN L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 195 FCIVGQLKQAI 205
C G+L++A+
Sbjct: 61 LCKNGKLEKAL 71
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 87/202 (43%), Gaps = 1/202 (0%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLGQTTSAFSVL 68
++ FN +L++ +K + L ++ I P +V+ + LI C A ++L
Sbjct: 144 VLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALL 203
Query: 69 ANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
I +G +P +TF TL+ L+G + ++ + ++ +Y + GL
Sbjct: 204 DEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANE 263
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
++ + +++ + P+V +N +I + + A Y E++ G P+ T+
Sbjct: 264 AKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATF 323
Query: 189 NALIYGFCIVGQLKQAIGLLDE 210
L+ C G + AI L E
Sbjct: 324 ALLLPAMCKAGDFESAIELFKE 345
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 86/212 (40%), Gaps = 40/212 (18%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
++ I P I+ +N ++ +L + A++L ++E G+ P +VT + L+ GQ
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 63 SAFSVLANILKR-----------------------------------GFQPTTITFTTLI 87
+ A ++++ G +P +F +I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 88 KGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLII 147
+G G + A ++ ++ G+R ++ ++ L+ +CK G+ +A+E ++ + +
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 148 PNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
++D L K + A E IVK
Sbjct: 353 VGQTTLQQLVDELVKGSKREEA-----EEIVK 379
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/139 (19%), Positives = 62/139 (44%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ + I +N L L ++L +++ +G+ P + + + +I G+
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + I+K G++P TF L+ +C G+ A++ ++ + + Q +
Sbjct: 301 MDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQ 360
Query: 121 LINGLCKMGETSAALEFLR 139
L++ L K + A E ++
Sbjct: 361 LVDELVKGSKREEAEEIVK 379
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +N ++ + + + + ++ R+M P+L T S L++ + + A +
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+L RG PTT T+ +K LC G H A+ + G R+++ +Y L+ L +
Sbjct: 383 FEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSR 442
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ L +++ +V +Y I+D LC + +A + E + KG PN
Sbjct: 443 FGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFV 502
Query: 188 YNAL 191
Y+ L
Sbjct: 503 YSRL 506
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 3/196 (1%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
+ S V+ + AI L + E G+ S + + L+ C C ++A SV K+G
Sbjct: 192 AMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKG 249
Query: 76 FQP-TTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
P + ++ +I G G V + ++ GF + +SY LI GL + G + +
Sbjct: 250 NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS 309
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
+E I+ + +P+ +YN +I + + Y M+ + PN+ TY+ L+ G
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 195 FCIVGQLKQAIGLLDE 210
++ A+ + +E
Sbjct: 370 LIKGRKVSDALEIFEE 385
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 86/187 (45%), Gaps = 1/187 (0%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN +L L + H S A S+ + I + +I+I+ LG+ VL ++
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNAKK-GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ GF P ++++ LI+GL G ++ +++ D + +G + Y +I +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
++ + R++ + PN+ Y+ ++ L K VS A ++ EM+ +G+ P + +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 193 YGFCIVG 199
C G
Sbjct: 403 KPLCSYG 409
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 11/175 (6%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILK----RGFQPTTITFTTLIKGLCLRGN 95
G+T + + S+++ LG+ FS + ++LK G P T +
Sbjct: 146 GVTKDVGSYSVILRA---LGRRK-LFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 96 VHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP-NVVMYN 154
V RA++ + + G + + S+ L+ LC+ SAA +G IP + YN
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGN--IPFDSCSYN 259
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+I K V + EM+ G P+ ++Y+ LI G G++ ++ + D
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFD 314
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 73/173 (42%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
ML P + ++K+++ L+K + S A+ + +M G+ P+ ++ + C G
Sbjct: 351 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGP 410
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + K G + + + L+K L G L D + G+ + Y
Sbjct: 411 PHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEY 470
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
+++GLC +G A+ + + + PN +Y+ + L N A L+
Sbjct: 471 IVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+M G++ S+ + + LIN + G+ ++ +L + P+ +T+ T+I C RG
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARG 224
Query: 95 NV--HRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVM 152
+ L + +G + + V+Y TL++ G A R + I+P++
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 153 YNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
Y+ ++++ K + C+L EM G P++ +YN L+ + G +K+A+G+ +
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 77 QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALE 136
+P +T +I L G + + L+ D + +QG + SY LIN + G +LE
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 137 FLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHA-CNLYSEMIVKGISPNVVTYNALIYGF 195
L +++ + I P+++ YNT+I++ + L L++EM +GI P++VTYN L+
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 196 CIVG 199
I G
Sbjct: 258 AIRG 261
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 3/192 (1%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLG--QTTS 63
++ + + ++ + + Y T++ L +M+ I+PS++T + +IN C G
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEG 230
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
+ A + G QP +T+ TL+ +RG A + G + +Y L+
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
K+ + L ++ +P++ YN ++++ K + A ++ +M G +P
Sbjct: 291 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 350
Query: 184 NVVTYNALIYGF 195
N TY+ L+ F
Sbjct: 351 NANTYSVLLNLF 362
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 2/202 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +N +L + K+ A+ + QM+ G TP+ T S+L+N G+ +
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLINGLC 126
+ P T+ LI+ G + FHD+V + + +Y +I
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV-EENIEPDMETYEGIIFACG 433
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K G A + L+ + I+P+ Y +I++ + L A ++ M G +P++
Sbjct: 434 KGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE 493
Query: 187 TYNALIYGFCIVGQLKQAIGLL 208
T+++L+Y F G +K++ +L
Sbjct: 494 TFHSLLYSFARGGLVKESEAIL 515
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 81/198 (40%), Gaps = 1/198 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P I+ +N +L++ A + R M GI P L T S L+ L +
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC 302
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L + G P ++ L++ G++ A+ + A G N +Y L+N
Sbjct: 303 DLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
+ G + +++ P+ YN +I+ + L+ +M+ + I P++
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 186 VTYNALIYGFCIVGQLKQ 203
TY +I+ C G L +
Sbjct: 423 ETYEGIIFA-CGKGGLHE 439
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 7/214 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTK-HYSTAISLSRQMEITGITPSLVTLSILINCHCYLG 59
M +I+P I+ +N V+ + + + + L +M GI P +VT + L++ G
Sbjct: 202 MKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVV--LAQGFRLNQV- 116
A V + G P T++ L++ G + R + D++ +A G L +
Sbjct: 262 LGDEAEMVFRTMNDGGIVPDLTTYSHLVETF---GKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
SY L+ K G A+ Q++ PN Y+ +++ + L+ EM
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
P+ TYN LI F G K+ + L +
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 43 PSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF 102
P+ +I+I+ G V + +G + ++T LI G +L+
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 103 HDVVLAQGFRLNQVSYGTLINGLCKMG-ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
D + + + ++Y T+IN + G + L ++ + I P++V YNT++ +
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 162 KDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
L A ++ M GI P++ TY+ L+ F + +L++ LL E
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGE 307
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%)
Query: 31 SLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGL 90
SL++QM+ G+ P L+++I + + A V + G +P T++ L+KG+
Sbjct: 209 SLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 91 CLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNV 150
C +G V + L F+ + +G N Y LI L A+E + + + P++
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDM 328
Query: 151 VMYNTIIDSLCKDNLVSHACNLYSEM 176
+ YNT++ LC+ S A + E
Sbjct: 329 LTYNTVLTELCRGGRGSEALEMVEEW 354
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 54 CHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
C+ YL + S+ + G P T +IK V A++ + G
Sbjct: 200 CYVYLH---AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEP 256
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
N +Y L+ G+C+ G L F ++++ + ++PN Y +I SL + + A +
Sbjct: 257 NAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVV 316
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+M+ +SP+++TYN ++ C G+ +A+ +++E
Sbjct: 317 YDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Query: 36 MEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGN 95
M+ G+ + T +I I C ++ A ++L +L G +P T+T++ LI G C +
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 96 VHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNT 155
A + +++ +G + + Y TLI LCK G+ AL ++ + +P+ + +
Sbjct: 308 FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKS 367
Query: 156 IIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
+++ L KD+ V A L ++ K + NV +N +
Sbjct: 368 LVNGLAKDSKVEEAKELIGQVKEK-FTRNVELWNEV 402
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
I P + +N+++ ++ S++ S+ +ME GI P+ + ++I+ ++
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
VLA + RG T+ I+ LC R A D +L+ G + N V+Y LI+G
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
C + A + + + + P+ Y T+I LCK A +L E + K P+
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 186 VTYNALIYGFCIVGQLKQAIGLL 208
+L+ G ++++A L+
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELI 385
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%)
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
G +P T+ +IK C G+ + + +G + N S+G +I+G ++
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
+ L ++ + + V YN I SLCK A L M+ G+ PN VTY+ LI+G
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 195 FCIVGQLKQAIGLL 208
FC ++A L
Sbjct: 302 FCNEDDFEEAKKLF 315
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%)
Query: 42 TPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ 101
P+ T +++I + F ++ ++ G P T+ +I+G+C+ V A +
Sbjct: 338 APTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYK 397
Query: 102 FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
F D + +G+ + V+Y + LC+ +T AL+ ++ P+V YN +I
Sbjct: 398 FLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
Query: 162 KDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + A N ++EM + +V TY A+I G + K+A LL+E
Sbjct: 458 EMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEE 506
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 43 PSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF 102
P + ++L++ C G ++L + R +P TF L G C + +A++
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 103 HDVVLAQGFRLNQVSYGTLINGLCKMG---ETSAALEFLRQIEGQLIIPNVVMYNTIIDS 159
+ ++ G + +Y I+ C+ G E + +F+ + P + +I +
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 160 LCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
L K++ L MI G P+V TY +I G C+ ++ +A LDE
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE 401
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 80/196 (40%)
Query: 7 TPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFS 66
P F ++ +L K L +M TG P + T +I C + A+
Sbjct: 338 APTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYK 397
Query: 67 VLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
L + +G+ P +T+ ++ LC AL+ + ++ + +Y LI+
Sbjct: 398 FLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
+M + A +++ + + +V Y +I+ L + AC L E++ KG+
Sbjct: 458 EMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYR 517
Query: 187 TYNALIYGFCIVGQLK 202
+++ + VG LK
Sbjct: 518 VFDSFLMRLSEVGNLK 533
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 44 SLVTLSILINCHCYLGQTTSAFSVLANI-LKRGFQPTTITFTTLIKGLCLRGNVHRALQF 102
++ +L++++ C G+ T A ++ + L +G + +TF ++I G C++ L
Sbjct: 209 TVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEEL-- 265
Query: 103 HDVVLA----QGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIID 158
D+VL + L+ SY LI+G G+ A + + + + +YN I++
Sbjct: 266 -DLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMN 324
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ LV LYSEM +G++PN TY L+ G C G++ +A+ L+E
Sbjct: 325 GYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNE 376
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 79/174 (45%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
I+ F ++ VK + + + ME + L + +LI+ G+ A ++
Sbjct: 246 IVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVL 305
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ + + + + ++ G G V + ++ + + ++G N+ +Y L+NGLCK G
Sbjct: 306 MMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAG 365
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
+ A+ FL ++ + MY+T+ + + ++ + + +EMI G P
Sbjct: 366 KVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 3/208 (1%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+ ++ P F +L+SL + + ++ + G LVT ++L NC +G +
Sbjct: 345 KRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNS 401
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A VL+ + + F T+T + LC G A++ + +++ + L+ + +I
Sbjct: 402 YALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAII 461
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+ L ++G+ + A+ ++ + +VV Y I L + + A +L +M GI
Sbjct: 462 DSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIY 521
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLDE 210
PN TY +I G C + ++ +L E
Sbjct: 522 PNRRTYRTIISGLCKEKETEKVRKILRE 549
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+Q+ +P ++ + ++ V A ++ +++ G+ P +V +++I+ + LG+
Sbjct: 273 MIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGR 332
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVH----------------------- 97
A V ++ KR P TF +++ LCL G
Sbjct: 333 FEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSN 392
Query: 98 ---------RALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
AL+ ++ + F L+ +Y ++ LC+ G AA++ + I +
Sbjct: 393 CFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHL 452
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGL 207
+ ++ IIDSL + + A +L+ I++ +VV+Y I G ++++A L
Sbjct: 453 DAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSL 511
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 7/188 (3%)
Query: 26 YSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTT 85
Y AI + M G P+ ++++++ + L A + I R F +F
Sbjct: 124 YDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDI 179
Query: 86 LIKGLCLRGNVHRALQFHDV---VLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIE 142
+ C RG + V ++ +GF N+ +G ++ C+ G S A + + +
Sbjct: 180 ALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMI 239
Query: 143 GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLK 202
I +V +++ ++ + A +L+++MI G SPN+VTY +LI GF +G +
Sbjct: 240 CSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVD 299
Query: 203 QAIGLLDE 210
+A +L +
Sbjct: 300 EAFTVLSK 307
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 77/168 (45%)
Query: 34 RQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLR 93
++M G P+ ++ C G + AF V+ ++ G + ++ L+ G
Sbjct: 201 KRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRS 260
Query: 94 GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMY 153
G +A+ + ++ G N V+Y +LI G +G A L +++ + + P++V+
Sbjct: 261 GEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLC 320
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
N +I + + A +++ + + + P+ T+ +++ C+ G+
Sbjct: 321 NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P F ++L +T S A + M +GI+ S+ S+L++ G+ A +
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+++ G P +T+T+LIKG G V A V ++G + V +I+ +
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
+G A + +E + ++P+ + +I+ SLC
Sbjct: 330 LGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 5/202 (2%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I +++++ L K K A + QME G P + T +ILI HC + A +
Sbjct: 403 PDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALAC 462
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF-HDVVLAQGFRLNQVSYGTLINGLC 126
AN+L++GF + LI G + A F ++V + Q +Y LI+ L
Sbjct: 463 FANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLL 522
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K+ ++ AL+ L+ ++ Q N Y D + +++ SP+
Sbjct: 523 KIKKSEEALDLLQMMKKQ----NYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFA 578
Query: 187 TYNALIYGFCIVGQLKQAIGLL 208
Y +I F G+L A LL
Sbjct: 579 AYFHVIEAFYREGRLTDAKNLL 600
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 8/195 (4%)
Query: 15 KVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKR 74
KV K++ + + L M PS+ S+L+ YL + + L + R
Sbjct: 303 KVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLR---YLSGSPNPDLDLVFRVSR 359
Query: 75 GFQPTTITFTTLI-----KGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
++ T + + + + L G A + + G+ + ++Y L+ GLCK
Sbjct: 360 KYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAK 419
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
A L Q+E Q P++ + +I CK+N + A ++ M+ KG + +
Sbjct: 420 RLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLD 479
Query: 190 ALIYGFCIVGQLKQA 204
LI GF I + + A
Sbjct: 480 VLIDGFVIHNKFEGA 494
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 4/198 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
++ + SL + A +++ M G P +T S L+ C + A VL +
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQME 432
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+G P T+T LI+G C + +AL +L +GF ++ LI+G +
Sbjct: 433 AQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFE 492
Query: 133 AALEFLRQ-IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
A FL + ++ + P Y +ID L K A +L M + ++
Sbjct: 493 GASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGY 552
Query: 192 IYGFCIVGQLKQAIGLLD 209
+ F G L+ A LD
Sbjct: 553 LAKF---GTLEDAKKFLD 567
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/180 (23%), Positives = 78/180 (43%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+ ++ SL K+ A L +QM+ + PS S L++ G+ ++ V +
Sbjct: 316 YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQ 375
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
G +P+ F +LI G + AL+ D + GFR N Y +I K G+
Sbjct: 376 GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLE 435
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A+ + +E +P Y+ +++ V A +Y+ M G+ P + +Y +L+
Sbjct: 436 VAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 79/181 (43%)
Query: 29 AISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIK 88
A + ME T T ++I G+ +AF + + +R +P+ F++L+
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356
Query: 89 GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
+ G + +++ + + G R + + +LI+ K G+ AL +++ P
Sbjct: 357 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 416
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
N +Y II+S K + A ++ +M G P TY+ L+ GQ+ A+ +
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476
Query: 209 D 209
+
Sbjct: 477 N 477
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 71/147 (48%)
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
AF + G + T T+ L+ +G ++A + ++ + L+ +Y +I
Sbjct: 262 AFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIP 321
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
L K G AA + +Q++ + + P+ ++++++DS+ K + + +Y EM G P
Sbjct: 322 SLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRP 381
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + +LI + G+L A+ L DE
Sbjct: 382 SATMFVSLIDSYAKAGKLDTALRLWDE 408
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 81/192 (42%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + ++ P F+ ++ S+ K T++ + +M+ G PS LI+ + G+
Sbjct: 339 MKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGK 398
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
+A + + K GF+P +T +I+ G + A+ + GF +Y
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L+ G+ +A++ + + P + Y +++ L LV A + EM G
Sbjct: 459 LLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
Query: 181 ISPNVVTYNALI 192
S +V + L+
Sbjct: 519 YSVDVCASDVLM 530
Score = 50.4 bits (119), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 83/198 (41%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N+V+ L K + A ++ + +G T + L+ G AF + ++
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
K T+ +I L G + A + + + R + + +L++ + K G
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
+++ +++G P+ M+ ++IDS K + A L+ EM G PN Y +I
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 193 YGFCIVGQLKQAIGLLDE 210
G+L+ A+ + +
Sbjct: 426 ESHAKSGKLEVAMTVFKD 443
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%)
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
+A + L ++ + G P+ + +TTLI G + G + +A + + +G N +Y ++I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
GLC GE A L+++E + PN V+Y+T++ L K +S A + EM+ KG
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 133 AALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
AAL L ++ I P+V+ Y T+ID + A ++ EM VKG PNV TYN++I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 193 YGFCIVGQLKQAIGLLDE 210
G C+ G+ ++A LL E
Sbjct: 767 RGLCMAGEFREACWLLKE 784
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 118 YGTLINGLCKMGETSAALEFLRQ--IEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSE 175
Y TLI+G GE A E R+ ++GQL PNV YN++I LC AC L E
Sbjct: 727 YTTLIDGYVVSGELDKAKEMFREMTVKGQL--PNVFTYNSMIRGLCMAGEFREACWLLKE 784
Query: 176 MIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
M +G +PN V Y+ L+ G+L +A ++ E
Sbjct: 785 MESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%)
Query: 28 TAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLI 87
A++ M+ GI PS++ + LI+ + G+ A + + +G P T+ ++I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 88 KGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQI 141
+GLC+ G A + ++G N V Y TL+ L K G+ S A + ++++
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 4/196 (2%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I FN ++ + + Y A SL Q+ + P+ T ++LI +C G A V
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 68 LANILKRGFQPTTI---TFTTLIKGLCLR-GNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
L + P TI + I+GL R GN A+ + + +Y +IN
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
K ++ + + ++ PN+ Y ++++ ++ L A ++ ++ G+ P
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 184 NVVTYNALIYGFCIVG 199
+V YNAL+ + G
Sbjct: 355 DVYVYNALMESYSRAG 370
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 39 TGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHR 98
+ P ++ ++LI+ + Q A S+ +L+ + PT T+ LIK C+ G + R
Sbjct: 171 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 230
Query: 99 ALQFHDVVLAQGFRLNQVS--------YGTLINGLCKM-GETSAALEFLRQIEGQLIIPN 149
A +VVL + + + VS Y I GL K G T A++ ++++ P
Sbjct: 231 A----EVVLVE-MQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 285
Query: 150 VVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
YN +I+ K + + LY EM PN+ TY AL+ F G ++A + +
Sbjct: 286 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 345
Query: 210 E 210
+
Sbjct: 346 Q 346
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 13 FNKVLTSLVKTK-HYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANI 71
+N + L+K K + AI + ++M+ P+ T +++IN + ++ ++ + +
Sbjct: 253 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 312
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
+P T+T L+ G +A + + + G + Y L+ + G
Sbjct: 313 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 372
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
A E ++ P+ YN ++D+ + L S A ++ EM GI+P + ++ L
Sbjct: 373 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 432
Query: 192 IYGF 195
+ +
Sbjct: 433 LSAY 436
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 4/196 (2%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P +I FN ++ + + Y A SL Q+ + P+ T ++LI +C G A V
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 68 LANILKRGFQPTTI---TFTTLIKGLCLR-GNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
L + P TI + I+GL R GN A+ + + +Y +IN
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
K ++ + + ++ PN+ Y ++++ ++ L A ++ ++ G+ P
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 184 NVVTYNALIYGFCIVG 199
+V YNAL+ + G
Sbjct: 333 DVYVYNALMESYSRAG 348
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 39 TGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHR 98
+ P ++ ++LI+ + Q A S+ +L+ + PT T+ LIK C+ G + R
Sbjct: 149 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 208
Query: 99 ALQFHDVVLAQGFRLNQVS--------YGTLINGLCKM-GETSAALEFLRQIEGQLIIPN 149
A +VVL + + + VS Y I GL K G T A++ ++++ P
Sbjct: 209 A----EVVLVE-MQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPT 263
Query: 150 VVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
YN +I+ K + + LY EM PN+ TY AL+ F G ++A + +
Sbjct: 264 TETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
Query: 210 E 210
+
Sbjct: 324 Q 324
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 13 FNKVLTSLVKTK-HYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANI 71
+N + L+K K + AI + ++M+ P+ T +++IN + ++ ++ + +
Sbjct: 231 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 290
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
+P T+T L+ G +A + + + G + Y L+ + G
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
A E ++ P+ YN ++D+ + L S A ++ EM GI+P + ++ L
Sbjct: 351 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 410
Query: 192 IYGF 195
+ +
Sbjct: 411 LSAY 414
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Query: 47 TLSILINCHC-YLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDV 105
+ +I++N C +G A V + G + ++++++I G++++ L+ D
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 106 VLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQL-IIPNVVMYNTIIDSLCKDN 164
+ + ++ Y +++ L K S A ++ +E + I PNVV YN++I LCK
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 165 LVSHACNLYSEMIVKGISPNVVTYNALI 192
A ++ EM+ KG+ P + TY+A +
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFM 415
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 4/180 (2%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEI-TGITPSLVTLSILINCHCYLGQTTSA 64
I P +N V+ +L K S A +L + ME GI P++VT + LI C +T A
Sbjct: 333 IEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEA 392
Query: 65 FSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
V +L++G PT T+ ++ L V L + G +Y LI
Sbjct: 393 KQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLA---KMRKMGCEPTVETYIMLIRK 449
Query: 125 LCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
LC+ + L +++ + + P++ Y +I L + + A Y EM KG+ PN
Sbjct: 450 LCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 91/202 (45%), Gaps = 4/202 (1%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ ++ +++ K + + L +M+ I P + +++ + A +++
Sbjct: 302 VVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMK 361
Query: 70 NILK-RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
+ + +G +P +T+ +LIK LC A Q D +L +G +Y + + +
Sbjct: 362 TMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRT 420
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
GE E L ++ P V Y +I LC+ + L+ EM K + P++ +Y
Sbjct: 421 GEE--VFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSY 478
Query: 189 NALIYGFCIVGQLKQAIGLLDE 210
+I+G + G++++A G E
Sbjct: 479 IVMIHGLFLNGKIEEAYGYYKE 500
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 9 PIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVL 68
P + +++++ YS S Q+ G+ ++ ++ H + + F+
Sbjct: 53 PSVYTRDIVSNIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWA 112
Query: 69 ANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
A I +GF+ T+TT++ G + ++ +G ++ V+Y +LI+ +
Sbjct: 113 AQI--KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSS 170
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
G+ A+ ++ P VV Y + L D V A +Y EM+ +SPN TY
Sbjct: 171 GDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTY 230
Query: 189 NALIYGFCIVGQLKQAIGLL 208
L+ G+ ++A+ +
Sbjct: 231 TVLMEYLVATGKCEEALDIF 250
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%)
Query: 37 EITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNV 96
+I G T + +++ G+ S +SV + ++G T+T+T+LI + G+V
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 97 HRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTI 156
A++ + + G VSY + L G A E +++ + PN Y +
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 157 IDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQ 200
++ L A +++ +M G+ P+ N LI G+
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGE 277
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 95/210 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P + ++ +L+ V+ + A+S+ +M+ L T +I+I+ + L
Sbjct: 286 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM 345
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + ++ K +P +++ T+++ A+ ++ + N V+Y T
Sbjct: 346 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I K E A +++++ + I PN + Y+TII K + A L+ ++ G
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + V Y +I + VG + A LL E
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLLHE 495
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 52/210 (24%), Positives = 96/210 (45%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M Q R++ ++ ++ ++ + YS AIS+ +++ +GITP LV + +IN +
Sbjct: 216 MEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKL 275
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A ++ + + G P T++++TL+ AL + L+ +
Sbjct: 276 FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNI 335
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+I+ ++ A + I PNVV YNTI+ + L A +L+ M K
Sbjct: 336 MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 395
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I NVVTYN +I + + ++A L+ E
Sbjct: 396 IEQNVVTYNTMIKIYGKTMEHEKATNLVQE 425
Score = 60.5 bits (145), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+M I P ++ +N +L + + + AI L R M+ I ++VT + +I + +
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A +++ + RG +P IT++T+I G + RA + + G ++QV Y T+I
Sbjct: 418 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
++G A L +++ +P+ + T I L K A ++ + G
Sbjct: 478 VAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEV 533
Query: 183 PNVVTYNALI 192
++ + +I
Sbjct: 534 KDISVFGCMI 543
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 67/151 (44%)
Query: 42 TPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ 101
TPS+ ++++ Q A + + +R P T++TLI G AL
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 102 FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
+ + + V Y LI ++ + S A+ +++ I P++V YN++I+
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 162 KDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
K L A L EM G+ PN V+Y+ L+
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 20/130 (15%)
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFH------DVVLAQGFRLNQVSYGTLINGLCKMG 129
+ P+ + +++ NV RA QF D + + ++ +Y TLI K G
Sbjct: 151 YTPSVFAYNVVLR------NVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEG 204
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIID---SLCKDNLVSHACNLYSEMIVKGISPNVV 186
+AL +L+++E + ++V+Y+ +I+ LC S A +++S + GI+P++V
Sbjct: 205 MFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD---YSKAISIFSRLKRSGITPDLV 261
Query: 187 TYNALI--YG 194
YN++I YG
Sbjct: 262 AYNSMINVYG 271
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
++++ K + + A+ + + M G+ P+LV + LIN G+ F V + + G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFR-LNQVSYGTLINGLCKMGETSAA 134
+P T+ L+ L LQ D++ ++ LN+ Y T + K+G A
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 135 LEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYG 194
++ L ++EG + + YN +I + K A +Y M + PN TY +L+
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS 469
Query: 195 FCIVGQLKQAI 205
CI G L +
Sbjct: 470 -CIWGSLWDEV 479
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 104/229 (45%), Gaps = 34/229 (14%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+I +N ++ + + K++ + +M+ G+ P T + L++ + +S+ L+
Sbjct: 909 VIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLS 968
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL-NQVSYGTLINGLCKM 128
++ +G +P + + LC G+V +AL V+ ++G+ L + V ++ L
Sbjct: 969 AMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISK 1028
Query: 129 GETSAALEFLRQI-------------------EGQL--------------IIPNVVMYNT 155
GE A +FL ++ G L IP Y++
Sbjct: 1029 GEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDS 1088
Query: 156 IIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
+I+ L + N + A + ++EM+ G+SP++ T++ L++ FC Q+ ++
Sbjct: 1089 VINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLES 1137
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 45 LVTLSILINCHCYLGQTTSAFS-------VLANILKRGFQPTTITFTTLIKGLCLRGNVH 97
LV L ++N Y + T ++ +L+ I + ++P ++ LC R
Sbjct: 282 LVALGCILNSSIY-SKITIGYNEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSE 340
Query: 98 RALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTII 157
RA + + + GF+ ++V++G LI C G+ A+ +L +I + P+V YN I+
Sbjct: 341 RAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAIL 400
Query: 158 DSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
L + L H + EM G+ ++ T+ ++ G+C Q ++A
Sbjct: 401 SGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEA 447
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 63/145 (43%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
+++ P + N++L SL + A ++E G VT ILI CY G
Sbjct: 316 EVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIK 375
Query: 63 SAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A L+ I+ +G++P ++ ++ GL +G D + G L+ ++ ++
Sbjct: 376 RAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMV 435
Query: 123 NGLCKMGETSAALEFLRQIEGQLII 147
G CK + A + ++ G +I
Sbjct: 436 TGYCKARQFEEAKRIVNKMFGYGLI 460
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 34/211 (16%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
FN +L + V+ Y A L + + + + SL I+ G+T+S NIL
Sbjct: 447 FNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSK-----GRTSSP-----NIL 496
Query: 73 KRG----------------------FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG 110
K F+PTT T+ L+K + +R + D + + G
Sbjct: 497 KNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGT--DYYRGKELMDEMKSLG 554
Query: 111 FRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHAC 170
NQ+++ TLI+ G+ A+ LR + P+VV Y T I ++ + A
Sbjct: 555 LSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAF 614
Query: 171 NLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
+L+ EM I PN VTYN L+ G L
Sbjct: 615 SLFEEMRRYQIKPNWVTYNTLLKARSKYGSL 645
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF-HDVVLAQGFRLNQVS 117
G T A N+ G + + +F ++ L ++H +F HD G ++ VS
Sbjct: 120 GMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVS 179
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
+ I C++G A +R++E + P+VV Y T+I +L K L++ M+
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 239
Query: 178 VKGISPNVVTYNALI 192
+KG PN+ T+N I
Sbjct: 240 LKGCKPNLTTFNVRI 254
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINC-----HCYLGQTTSAF 65
+ FN + S + A R+ME +G+TP +VT + LI+ C +G
Sbjct: 178 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 237
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQG---FRLNQVSYGTLI 122
VL +G +P TF I+ L N RA +D++L + ++Y +I
Sbjct: 238 MVL-----KGCKPNLTTFNVRIQFLV---NRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
G A + G+ PN+ +Y T+I LCK A + + + K
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLD 209
PN+ T L+ G GQL QA +++
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 10/170 (5%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGL-----CLRG 94
GI V+ +I I C LG A+ + + K G P +T+TTLI L C+ G
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 95 NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
N ++++ +G + N ++ I L A + L + + P+ + YN
Sbjct: 232 N-----GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYN 286
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
+I A +Y+ M KG PN+ Y +I+ C G A
Sbjct: 287 MVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLA 336
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+TP ++ + ++++L K + L M + G P+L T ++ I + A
Sbjct: 208 LTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDAN 267
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
+L + K +P +IT+ +IKG L A + + + +G++ N Y T+I+ L
Sbjct: 268 DLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYL 327
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
CK G A + + PN+ ++ L K + A ++ E++ + + P
Sbjct: 328 CKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 94/225 (41%), Gaps = 44/225 (19%)
Query: 20 LVKTKHYSTAISLSRQMEITGITPSLVT---LSILINCHCYLGQTTSAFSVLANILKRGF 76
L K++ +S +L +E P + T LS LI + A + + K G
Sbjct: 77 LAKSQRFSDIEAL---IESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGT 133
Query: 77 QPTTITFTTLIKGLCLRGNV-HRALQFHDVVLAQ--GFRLNQVSYGTLINGLCKMGETSA 133
T ++F L+ CL ++ R Q D + +++SYG LI C G+
Sbjct: 134 PRTVVSFNALL-AACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEK 192
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK-------------- 179
A+E +R +E + + ++ + TI+ SL K+ LV A +L+ EM+ K
Sbjct: 193 AMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLM 252
Query: 180 --------------------GISPNVVTYNALIYGFCIVGQLKQA 204
G+ P+ V+YN L+ +C+ G + +A
Sbjct: 253 NAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEA 297
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 63.9 bits (154), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 81/185 (43%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+ +N ++ L+K + + +M + G++P+ T++ + C G A +
Sbjct: 357 VFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYR 416
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ + GF PT +++ LI LC +V +A + +G L ++ TL N LC G
Sbjct: 417 SRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKG 476
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+ A E + + ++P + II +LC V A + G+ + +
Sbjct: 477 KPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFT 536
Query: 190 ALIYG 194
+LIYG
Sbjct: 537 SLIYG 541
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 6/198 (3%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
++ +L +LV+ K + + + Q+ + G + VT SIL+ C G+ A L +L
Sbjct: 220 YHVLLNALVEEKCFDSFDVIFDQISVRGFVCA-VTHSILVKKFCKQGKLDEAEDYLRALL 278
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
L+ LC + A + D + G +Y I L K G +
Sbjct: 279 PNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLN 338
Query: 133 AALEFLRQI---EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+FL++I EG + V YN+++ L K+N + ++ +EM+V+G+SPN T N
Sbjct: 339 NPADFLQKISPLEGCEL--EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMN 396
Query: 190 ALIYGFCIVGQLKQAIGL 207
A + FC G + +A+ L
Sbjct: 397 AALCFFCKAGFVDEALEL 414
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 6/199 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ ++P N L K A+ L R G P+ ++ + LI+ C
Sbjct: 383 MMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANES 442
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A+ VL + RG TF+TL LC +G A + + +++
Sbjct: 443 VEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCK 502
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIID---SLCKDNLVSHACNLYSEMI 177
+I+ LC +G+ AL + + M+ ++I +L + ++ A L M
Sbjct: 503 IISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDI---AAKLIIRMQ 559
Query: 178 VKGISPNVVTYNALIYGFC 196
KG +P Y +I C
Sbjct: 560 EKGYTPTRSLYRNVIQCVC 578
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+ME G+ + T ++LIN C + +T A ++ + + G QP T+ LI+ L
Sbjct: 312 EMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAA 371
Query: 95 NVHRALQFHDVVLAQGFR--LNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVM 152
+ + D + + G+ LN+ Y + LC + A+ + ++ P +
Sbjct: 372 RIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKT 431
Query: 153 YNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
Y+ ++ +C +N ++ A LY E KGI+ + Y
Sbjct: 432 YDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEY 467
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 13/195 (6%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK-------RGFQPT 79
A L+ +M G +++++C C L + F + + K RG
Sbjct: 262 DEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRN 321
Query: 80 TITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL---CKMGETSAALE 136
T TF LI LC A+ + G + + +Y LI L ++GE ++
Sbjct: 322 TETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMID 381
Query: 137 FLRQIE-GQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGF 195
++ G+L+ N Y + LC + HA +++ M G P + TY+ L+
Sbjct: 382 KMKSAGYGELL--NKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKM 439
Query: 196 CIVGQLKQAIGLLDE 210
C QL +A GL E
Sbjct: 440 CANNQLTRANGLYKE 454
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 81/203 (39%), Gaps = 9/203 (4%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEIT-GITPSLVTLSILINCHCYLGQTTSAFSVLANILKR 74
+ LV+ +ME G+ +L++++ C G + A ++ N
Sbjct: 181 AIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE 240
Query: 75 GFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
F P LI G C+ + A + + GF + +Y +++ +CK+
Sbjct: 241 IF-PDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDP 299
Query: 135 LEFLRQIEGQLI------IP-NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+ ++E L+ +P N +N +I++LCK A L+ M G P+ T
Sbjct: 300 FKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAET 359
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y LI ++ + ++D+
Sbjct: 360 YLVLIRSLYQAARIGEGDEMIDK 382
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 8/191 (4%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N V++ VK+ A R E +LV+ + ++ C AF +L+ I +
Sbjct: 412 NSVISMFVKSDRMEDA---QRAFESLS-EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 74 RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
R + TF +L+ G+ G++ + Q H V+ G NQ LI+ K G
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
A +E + NV+ + ++I K +++MI +G+ PN VTY A++
Sbjct: 528 ASRVFNFMENR----NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Query: 194 GFCIVGQLKQA 204
VG + +
Sbjct: 584 ACSHVGLVSEG 594
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITP-----SLVTLSILINCHCYLGQTTSAFSV 67
+N VL +L + + A+ L ++ P +L T ++++N +C G+ A V
Sbjct: 313 YNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEV 372
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ P T++F L+ LC + A + + + + + ++ +YG L++ K
Sbjct: 373 FRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFK 432
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ + + + + PN+ +YN + D L K + A + + +M+V + +
Sbjct: 433 EGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEA 491
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
Y ++ G+L + + ++DE
Sbjct: 492 YKFIMRALSEAGRLDEMLKIVDE 514
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 91/207 (43%), Gaps = 5/207 (2%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P I N VL + ++ Y + L + GI P+++T +++ + + + A
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 68 LANILKRG-FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
+ P+ TF L+KGL N+ +A++ + + +GF ++ V Y L+ G
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 127 KMGETSAALEFLRQIEGQL--IIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG--IS 182
K + L+ ++++ +L + + V+Y ++ + A Y E + + +
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 183 PNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ + YN ++ G+ +A+ L D
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFD 334
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 79 TTITFTTLIKGLCLRGNVHRALQFHDVVLAQG-----FRLNQVSYGTLINGLCKMGETSA 133
+ + + +++ L G AL+ D V + +N ++ ++NG C G+
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 134 ALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
A+E RQ+ P+ + +N +++ LC + L++ A LY EM K + P+ TY L+
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 15 KVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKR 74
K+ +L K A+ L Q++ P +V + ++ + GQ V +L
Sbjct: 202 KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLAS 261
Query: 75 GFQPTTITFTTLIKGLCLRGNVHR-ALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSA 133
G P T++ LIKGL G H+ A ++ ++ G N +Y + + G+ +
Sbjct: 262 GVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEES 321
Query: 134 ALEFLRQIEGQLIIPN 149
A E L++++G+ +P+
Sbjct: 322 ARELLQEMKGKGFVPD 337
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 4/151 (2%)
Query: 35 QMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRG 94
+M G T V + + G+T A + + I + P + T +++ G
Sbjct: 190 KMRTEGFTNEAVKM---FDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAG 246
Query: 95 NVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET-SAALEFLRQIEGQLIIPNVVMY 153
L+ +LA G N +Y LI GL G+T A ++L ++ G + PN Y
Sbjct: 247 QAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATY 306
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPN 184
+ ++ ++ A L EM KG P+
Sbjct: 307 TAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
+ + L K G T ALE QI+ + +P+VV + I+++ ++ M+ G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 181 ISPNVVTYNALIYGFCIVGQ 200
+SPN TY+ LI G G+
Sbjct: 263 VSPNAYTYSVLIKGLAADGK 282
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 89/224 (39%), Gaps = 37/224 (16%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQM--EITGITPSLVTLSILINCHCYLGQTTS 63
+ P + FN ++++ ++ A + +M E I P +++ L+ C GQ
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGN------VHRALQFHDV------------ 105
A V I K G + T +T + G+ +++ ++ DV
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Query: 106 -----------------VLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
+QG RL +SY +L+ C + ALE +I+ + P
Sbjct: 688 VAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRP 747
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
+ N +I +LC+ N + A E+ G+ PN +TY+ L+
Sbjct: 748 TISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 2/172 (1%)
Query: 41 ITPSLVTLSILINCHCYLGQTTSAFSVLANILKR--GFQPTTITFTTLIKGLCLRGNVHR 98
+ P V + LI+ G AF VLA + P I+ L+K C G V R
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 99 ALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIID 158
A + + ++ G R Y +N K G+ A + ++ + + P+ V ++ +ID
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Query: 159 SLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
++ A + + +GI ++Y++L+ C K+A+ L ++
Sbjct: 688 VAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK 739
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 90/242 (37%), Gaps = 37/242 (15%)
Query: 6 ITPPIIEFN-------------------------------KVLTSLV----KTKHYSTAI 30
+ P + FN K+ T+L+ K+
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 31 SLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGL 90
+ QM +G+ +L T LI+ GQ AF + + +P + F LI
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 91 CLRGNVHRALQFHDVVLAQGFRL--NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIP 148
G V RA + A+ + + +S G L+ C G+ A E + I I
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 149 NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
+Y ++S K AC++Y +M K ++P+ V ++ALI L +A G+L
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 209 DE 210
+
Sbjct: 703 QD 704
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 1/162 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + +TP + F+ ++ K A + + + GI ++ S L+ C
Sbjct: 670 MKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKD 729
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A + I +PT T LI LC + +A+++ D + G + N ++Y
Sbjct: 730 WKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSM 789
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK 162
L+ + + + + L Q +G + PN++M I SLCK
Sbjct: 790 LMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCIT-SLCK 830
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 84/192 (43%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + N ++ S ++ S + ++ G+ P + T +ILI G SV
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+ + KR F TT+T+ +I+ G + + + QG + N ++Y +L+N K
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G LRQI ++ + +N II++ + ++ LY +M + P+ +T
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKIT 463
Query: 188 YNALIYGFCIVG 199
+ +I + G
Sbjct: 464 FATMIKTYTAHG 475
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 12/214 (5%)
Query: 3 QMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTT 62
Q P + K+ L K A L M G+ P++ + LI+ +
Sbjct: 137 QHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLD 196
Query: 63 SAFSVLANILK-RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ---GFRLNQVSY 118
AFS L + +P TFT LI C G R +VL G + V+Y
Sbjct: 197 KAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLG---RFDLVKSIVLEMSYLGVGCSTVTY 253
Query: 119 GTLINGLCKMG---ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSE 175
T+I+G K G E + L + IE +P+V N+II S + + YS
Sbjct: 254 NTIIDGYGKAGMFEEMESVLADM--IEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSR 311
Query: 176 MIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ G+ P++ T+N LI F G K+ ++D
Sbjct: 312 FQLMGVQPDITTFNILILSFGKAGMYKKMCSVMD 345
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 82/193 (42%), Gaps = 1/193 (0%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + F +++ K + S+ +M G+ S VT + +I+ + G SV
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 68 LANILKRGFQ-PTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLC 126
LA++++ G P T ++I N+ + ++ G + + ++ LI
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFG 332
Query: 127 KMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVV 186
K G + +E + V YN +I++ K + +++ +M +G+ PN +
Sbjct: 333 KAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSI 392
Query: 187 TYNALIYGFCIVG 199
TY +L+ + G
Sbjct: 393 TYCSLVNAYSKAG 405
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 2/205 (0%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQME-ITGITPSLVTLSILINCHCYLG 59
ML + P I + +++ K++ A S M+ ++ P + T ++LI+C C LG
Sbjct: 170 MLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLG 229
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
+ S++ + G +T+T+ T+I G G ++ G L V
Sbjct: 230 RFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTL 289
Query: 120 TLINGLCKMGETSAALE-FLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
I G G +E + + + + P++ +N +I S K + C++ M
Sbjct: 290 NSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEK 349
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQ 203
+ S VTYN +I F G++++
Sbjct: 350 RFFSLTTVTYNIVIETFGKAGRIEK 374
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 12/190 (6%)
Query: 4 MRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTS 63
M + P I FN ++ S K Y S+ ME + + VT +I+I G+
Sbjct: 315 MGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEK 374
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRG------NVHRALQFHDVVLAQGFRLNQVS 117
V + +G +P +IT+ +L+ G +V R + DVVL F
Sbjct: 375 MDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPF------ 428
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
+ +IN + G+ + E Q+E + P+ + + T+I + + L +MI
Sbjct: 429 FNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488
Query: 178 VKGISPNVVT 187
I +T
Sbjct: 489 SSDIGKKRLT 498
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%)
Query: 85 TLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQ 144
++ GLC G V A++ ++ +G V Y ++ CK + A R+++
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 145 LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
I PN Y ++ L N++ A SEM+ G SPNV T+ L+ C V ++QA
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 205 IGLLD 209
+D
Sbjct: 256 QSAID 260
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+++GLCK G A++ + + IP VV+Y ++++ CK + + A ++ +M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
GI+PN +Y L+ G L A+ E
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSE 226
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 3/152 (1%)
Query: 34 RQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLR 93
++M+ G+ P+ V + ++ C G A + + +G P + +T +++ C
Sbjct: 123 KKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKA 179
Query: 94 GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMY 153
+ A + + G N SYG L+ GL A+ F ++ PNV +
Sbjct: 180 HKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTF 239
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
++D+LC+ V A + + KG + NV
Sbjct: 240 VELVDALCRVKGVEQAQSAIDTLNQKGFAVNV 271
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%)
Query: 85 TLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQ 144
++ GLC G V A++ ++ +G V Y ++ CK + A R+++
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 145 LIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
I PN Y ++ L N++ A SEM+ G SPNV T+ L+ C V ++QA
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 205 IGLLD 209
+D
Sbjct: 256 QSAID 260
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
+++GLCK G A++ + + IP VV+Y ++++ CK + + A ++ +M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 180 GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
GI+PN +Y L+ G L A+ E
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSE 226
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 3/152 (1%)
Query: 34 RQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLR 93
++M+ G+ P+ V + ++ C G A + + +G P + +T +++ C
Sbjct: 123 KKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKA 179
Query: 94 GNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMY 153
+ A + + G N SYG L+ GL A+ F ++ PNV +
Sbjct: 180 HKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTF 239
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
++D+LC+ V A + + KG + NV
Sbjct: 240 VELVDALCRVKGVEQAQSAIDTLNQKGFAVNV 271
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
LK +P IT+ T+I+G C G++ A + ++++ +GF ++ + ++ L K +
Sbjct: 207 LKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQF 266
Query: 132 SAALE-FLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNA 190
A + F + + + Y +ID LCK+ + A ++ EM +G+ + +T+ +
Sbjct: 267 DEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWAS 326
Query: 191 LIYGFCIVGQLKQAIGLLD 209
LIYG + ++ +A GL++
Sbjct: 327 LIYGLLVKRRVVEAYGLVE 345
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 39/191 (20%)
Query: 51 LINCHCYLGQTTSAFSVLANILKRG-FQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ 109
+I + Q +F++ ++ K F P TFTTL K L V++ LQ H +
Sbjct: 48 MIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRF 107
Query: 110 GF-------------------------------RLNQVSYGTLINGLCKMGETSAALEFL 138
GF ++VS+ LI+G + GE A +
Sbjct: 108 GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF 167
Query: 139 RQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIV 198
Q+ + +VV+YN ++D K ++ A L+ EM K V+T+ +I+G+C +
Sbjct: 168 DQMPH---VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNI 220
Query: 199 GQLKQAIGLLD 209
+ A L D
Sbjct: 221 KDIDAARKLFD 231
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 5/200 (2%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
II + ++ + K Y AI++ +M GI P VT+S +I+ +LG V
Sbjct: 997 IISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHM 1056
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
L+ GF + L+ G++ RAL +V + N + ++I GL G
Sbjct: 1057 YTLQNGFVLDVYIGSALVDMYSKCGSLERAL----LVFFNLPKKNLFCWNSIIEGLAAHG 1112
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK-GISPNVVTY 188
AL+ ++E + + PN V + ++ + LV +Y MI I NV Y
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY 1172
Query: 189 NALIYGFCIVGQLKQAIGLL 208
+++ F G + +A+ L+
Sbjct: 1173 GGMVHLFSKAGLIYEALELI 1192
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 15/192 (7%)
Query: 19 SLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQP 78
S + + T SL RQM +GI P + L+ L+ G+T + +L+ + +GF P
Sbjct: 222 SFINHLYMETVRSLFRQMVDSGIEPDVFALNCLVK-----GRTINTRELLSEMKGKGFVP 276
Query: 79 TTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA---L 135
++ +L+ L G + A++ ++ G ++ +SY TL++ C+ G+ A L
Sbjct: 277 NGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL 336
Query: 136 EFLRQIEGQLI----IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
E LR E QL+ + MY +I L +++ C+ MIV+ + P + + L
Sbjct: 337 EMLR--EKQLVDIDSDDKLKMYQMVILVLLFSSMLPSVCDESRYMIVRNV-PALGCGDDL 393
Query: 192 IYGFCIVGQLKQ 203
+ F G++++
Sbjct: 394 MRLFMTYGEVEE 405
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 15/192 (7%)
Query: 19 SLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQP 78
S + + T SL RQM +GI P + L+ L+ G+T + +L+ + +GF P
Sbjct: 197 SFINHLYMETVRSLFRQMVDSGIEPDVFALNCLVK-----GRTINTRELLSEMKGKGFVP 251
Query: 79 TTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA---L 135
++ +L+ L G + A++ ++ G ++ +SY TL++ C+ G+ A L
Sbjct: 252 NGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL 311
Query: 136 EFLRQIEGQLI----IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
E LR E QL+ + MY +I L +++ C+ MIV+ + P + + L
Sbjct: 312 EMLR--EKQLVDIDSDDKLKMYQMVILVLLFSSMLPSVCDESRYMIVRNV-PALGCGDDL 368
Query: 192 IYGFCIVGQLKQ 203
+ F G++++
Sbjct: 369 MRLFMTYGEVEE 380
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 7/196 (3%)
Query: 9 PIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVL 68
+ +N ++ LV S A+ L ++ME GI S VT+ + +LG
Sbjct: 174 DVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG---- 229
Query: 69 ANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
NI I I G V +A Q + + + V++ T+I G
Sbjct: 230 ENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTG---KKSVVTWNTMITGFAVH 286
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
GE ALE ++E I P+ V Y + + LV + ++++ M KG+ N+ Y
Sbjct: 287 GEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHY 346
Query: 189 NALIYGFCIVGQLKQA 204
++ G+L++A
Sbjct: 347 GCVVDLLSRAGRLREA 362
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 77 QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALE 136
+ +++ T++ G GN+H AL F+ G + N+ S+ L+ K S L+
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK----SRQLQ 196
Query: 137 FLRQIEGQLIIP----NVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALI 192
RQ GQ+++ NVV+ +IID+ K + A + EM VK I + LI
Sbjct: 197 LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH----IWTTLI 252
Query: 193 YGFCIVGQLKQAIGLLDE 210
G+ +G ++ A L E
Sbjct: 253 SGYAKLGDMEAAEKLFCE 270
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 40 GITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRA 99
G P VT+SIL+N G+ A + L++ + T+ + TLIK + G + A
Sbjct: 734 GCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCA 793
Query: 100 LQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDS 159
+ ++ + G + +Y T+I+ + + A+E + + +Y +I
Sbjct: 794 SEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMH 853
Query: 160 LCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAI 205
K +S A +L+SEM KGI P +YN ++ C +L +
Sbjct: 854 YGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV-KICATSRLHHEV 898
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 70/139 (50%)
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGET 131
L+ ++P+ + +T +++ G + A + +L G + V+ GT++ + G
Sbjct: 180 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH 239
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
SA L F + ++ + I+ + +YN ++ SL K + +L+ EM+ +G+ PN TY +
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 192 IYGFCIVGQLKQAIGLLDE 210
+ + G ++A+ E
Sbjct: 300 VSSYAKQGFKEEALKAFGE 318
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 70/169 (41%)
Query: 42 TPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ 101
TP + +I+ + G A+ + ++G P +T + L+ L RG A
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 102 FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
L + L+ V Y TLI + + G+ A E ++ + ++ YNT+I
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 162 KDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ + A ++S G+ + Y +I + G++ +A+ L E
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSE 869
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 72/168 (42%)
Query: 43 PSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQF 102
PS+V +I++ + +G+ A +L+ G +P + T++ G L F
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 103 HDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCK 162
+ V + L+ Y +++ L K ++ ++ + + PN Y ++ S K
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 163 DNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
A + EM G P VTY+++I G ++AIGL ++
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED 353
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+ FN +L++ K + + L +ME G+ P + ++ +TT+A +
Sbjct: 423 VSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVH-RALQFHDVVLAQGFRLNQVSYGTLINGLCKM 128
++ G +PT I++ L+ L +G ++ A + + ++ G N +Y T+ + L
Sbjct: 483 AMVDNGEKPTVISYGALLSAL-EKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQ 541
Query: 129 GETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTY 188
+ + L+++ + I P+VV +N +I ++ L A + M + + PN +TY
Sbjct: 542 QKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITY 601
Query: 189 NALI 192
LI
Sbjct: 602 EMLI 605
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 86/187 (45%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P +N VL + K + AI + + M G P++++ L++ AF
Sbjct: 454 LKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAF 513
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V +++K G +P +TT+ L + + + ++G + V++ +I+G
Sbjct: 514 RVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGC 573
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
+ G + A E+ +++ + + PN + Y +I++L D A L+ + +G+ +
Sbjct: 574 ARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSS 633
Query: 186 VTYNALI 192
Y+A++
Sbjct: 634 KPYDAVV 640
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 11/211 (5%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+ P E +++ + + +HY L +++ SL + LI + +A
Sbjct: 342 VRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAAL 401
Query: 66 SVLANILKRGFQPTTIT-------FTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
+ ++L G +P ++ F L+ RG ++ + + +G + + +
Sbjct: 402 EIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHW 461
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
++ K ET+AA++ + + P V+ Y ++ +L K L A +++ MI
Sbjct: 462 NAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIK 521
Query: 179 KGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
GI PN+ Y + + GQ Q LLD
Sbjct: 522 VGIEPNLYAYTTM--ASVLTGQ--QKFNLLD 548
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 14 NKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILK 73
N ++T K K A+ + RQ E SL T + +I+ + L ++ A +L +L
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTE----ENSLCTWNSIISGYAQLNKSEEASHLLREMLV 374
Query: 74 RGFQPTTITFTTLIKGLCLR-GNVHRALQFHDVVLAQG-FRLNQVSYGTLINGLCKMGET 131
GFQP +IT +++ LC R N+ +FH +L + F+ + + +L++ K G+
Sbjct: 375 AGFQPNSITLASILP-LCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI 433
Query: 132 SAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNAL 191
AA +Q+ + + V Y ++ID A L+ EM GI P+ VT A+
Sbjct: 434 VAA----KQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAV 489
Query: 192 I 192
+
Sbjct: 490 L 490
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 67/137 (48%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N VL SL++ I++ ++M+ G + T +I+I+C + SA ++++ ++
Sbjct: 556 YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMI 615
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ GF P +TFT L+K L N AL D + L+ +SY T++ + G
Sbjct: 616 RDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMID 675
Query: 133 AALEFLRQIEGQLIIPN 149
+ Q+ + + P+
Sbjct: 676 VIEYIVEQMHREKVNPD 692
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVH---RALQFHDVVLAQG-FRLNQVSYGTLINGL 125
++++ GFQ + I+ +++ L G V+ R LQ + + A L +Y +++ L
Sbjct: 504 DMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSL 563
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
+ ET + ++++ +V YN +ID + AC L S MI G SP
Sbjct: 564 LEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKA 623
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
VT+ AL+ ++A+ LLD+
Sbjct: 624 VTFTALMKILLNDANFEEALNLLDQ 648
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 67/137 (48%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N VL SL++ I++ ++M+ G + T +I+I+C + SA ++++ ++
Sbjct: 528 YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMI 587
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETS 132
+ GF P +TFT L+K L N AL D + L+ +SY T++ + G
Sbjct: 588 RDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMID 647
Query: 133 AALEFLRQIEGQLIIPN 149
+ Q+ + + P+
Sbjct: 648 VIEYIVEQMHREKVNPD 664
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVH---RALQFHDVVLAQG-FRLNQVSYGTLINGL 125
++++ GFQ + I+ +++ L G V+ R LQ + + A L +Y +++ L
Sbjct: 476 DMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSL 535
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNV 185
+ ET + ++++ +V YN +ID + AC L S MI G SP
Sbjct: 536 LEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKA 595
Query: 186 VTYNALIYGFCIVGQLKQAIGLLDE 210
VT+ AL+ ++A+ LLD+
Sbjct: 596 VTFTALMKILLNDANFEEALNLLDQ 620
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 12/203 (5%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSV 67
P + N VL ++ +SL +ME G++P T + ++ L ++ F+
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 68 LANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCK 127
+++ GF LI G++ A + D + ++V++ ++ +G K
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFD----DSAKAHKVAWSSMTSGYAK 190
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
G+ A+ ++ + V +N +I K + A L+ K +VVT
Sbjct: 191 RGKIDEAMRLF----DEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEK----DVVT 242
Query: 188 YNALIYGFCIVGQLKQAIGLLDE 210
+NA+I G+ G K+A+G+ E
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKE 265
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 57.8 bits (138), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 75/161 (46%)
Query: 44 SLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFH 103
+++ +++I + A + +++ G P T+ TL++ L H+ +
Sbjct: 504 TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYL 563
Query: 104 DVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKD 163
+ + G+ + + Y +I+ K+G+ + A E +++ I P+VV+Y +I++
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 164 NLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQA 204
V A + M GI N V YN+LI + VG L +A
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA 664
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Query: 57 YLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQV 116
YL + F + KR T I + +IK + + +A + + +++ G ++
Sbjct: 486 YLSEAERVFICCQEVNKR----TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKC 541
Query: 117 SYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEM 176
+Y TL+ L +L ++ + + + Y +I S K ++ A +Y EM
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 177 IVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
+ I P+VV Y LI F G ++QA+ ++
Sbjct: 602 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVE 634
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 92/213 (43%), Gaps = 4/213 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M++ I P ++ + ++ + T + A+S M+ GI + V + LI + +G
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGY 660
Query: 61 TTSAFSVLANILK---RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS 117
A ++ +L+ + P T +I R V +A D + +G N+ +
Sbjct: 661 LDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFT 719
Query: 118 YGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
+ ++ K G A + +Q+ I+ + + YN+++ D A + EM+
Sbjct: 720 FAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMV 779
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
GI P+ T+ +L +G K+A+ ++E
Sbjct: 780 SSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEE 812
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 40/241 (16%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+I +N +L L K + SL +M GI P T LI+ + G A L
Sbjct: 187 VIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLG 246
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFR------LNQVSYGTLIN 123
+ K G QP +T +++ +A +F + L+ +Y T+I+
Sbjct: 247 KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMID 306
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTII------------DSL----------- 160
K G+ A E +++ + I+P V +NT+I SL
Sbjct: 307 TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPD 366
Query: 161 -----------CKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
K+N + A + EM G+ P+ V+Y L+Y F I +++A GL+
Sbjct: 367 TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426
Query: 210 E 210
E
Sbjct: 427 E 427
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 3/203 (1%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+IE+N ++ + +K A L M G+TP T + L+ L
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ + G+ I + +I G ++ A + + ++ + V YG LIN G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV---KGISPNVV 186
A+ ++ ++ I N V+YN++I K + A +Y +++ K P+V
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVY 684
Query: 187 TYNALIYGFCIVGQLKQAIGLLD 209
T N +I + +++A + D
Sbjct: 685 TSNCMINLYSERSMVRKAEAIFD 707
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 4/207 (1%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M+ +TP +N ++ L +M TG + +I+ LGQ
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A V +++ +P + + LI GNV +A+ + + + G N V Y +
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 121 LINGLCKMG---ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
LI K+G E A L Q + P+V N +I+ + ++V A ++ M
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK 710
Query: 178 VKGISPNVVTYNALIYGFCIVGQLKQA 204
+G N T+ ++ + G+ ++A
Sbjct: 711 QRG-EANEFTFAMMLCMYKKNGRFEEA 736
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 91/211 (43%), Gaps = 7/211 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLS-ILINCHCYLG 59
+ + + ++ + +++ K + A L RQM I P+ TL+ IL++C LG
Sbjct: 268 LFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSS-LG 326
Query: 60 QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG 119
SV +++ G + + FT+ I GN+ A D++ + N +S+
Sbjct: 327 SLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER----NVISWS 382
Query: 120 TLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK 179
++IN G AL+ +++ Q ++PN V + +++ + V + M
Sbjct: 383 SMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRD 442
Query: 180 -GISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
G+ P Y ++ G++ +A +D
Sbjct: 443 YGVVPEEEHYACMVDLLGRAGEIGEAKSFID 473
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 42 TPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQ 101
P+L ++LI C + + AF +LK P ITF LIK V Q
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138
Query: 102 FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLC 161
H ++ GF+ + +L++ G +AA +I GQ+ +VV + +++ C
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAA----GRIFGQMGFRDVVSWTSMVAGYC 194
Query: 162 KDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
K +V +A ++ EM + N+ T++ +I G+ ++AI L +
Sbjct: 195 KCGMVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFE 238
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Query: 4 MRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTS 63
+ ++P + N ++ SL+K A + R +++T +++I + Q
Sbjct: 92 LSLSPGVCNINLIIESLMKIGESGLAKKVLRNAS----DQNVITWNLMIGGYVRNVQYEE 147
Query: 64 AFSVLANILK-RGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
A L N+L +P +F + + G++H A H +++ G LN + L+
Sbjct: 148 ALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALV 207
Query: 123 NGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGIS 182
+ K G+ + E ++ +V ++N +I L + A ++SEM + +S
Sbjct: 208 DVYAKCGDIGTSREVFYSVKRN----DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVS 263
Query: 183 PNVVTYNALI 192
P+ +T+ L+
Sbjct: 264 PDSITFLGLL 273
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 45 LVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHD 104
+V+ S +I+ + G++ A S+ ++ P IT +L+ + ++ + H
Sbjct: 394 VVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHG 450
Query: 105 VVLAQGFRLNQVSYGT-LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKD 163
+ + + +N +S GT +++ K G A+E R+ Q+ N++ + II + +
Sbjct: 451 IAIRRSLAINDISVGTSIVDAYAKCG----AIEMARRTFDQITEKNIISWTVIISAYAIN 506
Query: 164 NLVSHACNLYSEMIVKGISPNVVTYNALI 192
L A L+ EM KG +PN VTY A +
Sbjct: 507 GLPDKALALFDEMKQKGYTPNAVTYLAAL 535
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 30 ISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKG 89
+L R + + P + LI C +G+ A + + +R +T+T +I G
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITG 86
Query: 90 LCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPN 149
G++ A + D V + R N V++ +++G + + S A E L Q ++ N
Sbjct: 87 YIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIA-EMLFQ---EMPERN 139
Query: 150 VVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLD 209
VV +NT+ID + + A L+ EM + N+V++N+++ G++ +A+ L +
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFE 195
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 2/176 (1%)
Query: 6 ITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAF 65
+TP ++ +L SL + A + M ++ + + + HCY G+ SA
Sbjct: 140 LTPST--YHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESAS 197
Query: 66 SVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGL 125
V+ I + G P + ++ L+ G C G V A+ + G + ++ +I GL
Sbjct: 198 EVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGL 257
Query: 126 CKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGI 181
+ G + LEF+ G+ + + + + L K A + EM+++G+
Sbjct: 258 VEGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGL 313
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 80/205 (39%), Gaps = 6/205 (2%)
Query: 8 PP----IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTS 63
PP EF+K++ + + T L + G + T L N Y
Sbjct: 33 PPGRRKTTEFDKLINEAGSSGDFETVRRLLNNRIVLGSFNTSDTFKFLTNTASYSSYLED 92
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
VL I GF + LI LC G + AL + L +Y ++
Sbjct: 93 LRRVLPQI-DGGFSRKN-AYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILC 150
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
L + + A + + + + +V YN + S C D + A + ++ G SP
Sbjct: 151 SLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSP 210
Query: 184 NVVTYNALIYGFCIVGQLKQAIGLL 208
+ +Y+AL+ G C G+++ A+ +L
Sbjct: 211 DSRSYDALVLGACRAGKVEAAMAIL 235
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 27 STAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTL 86
+++S +R + P +V + + + FS+ IL+ G P TF +L
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 87 IKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLI 146
+K + + Q H + + G N TLIN + + +A R + +++
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSA----RCVFDRIV 191
Query: 147 IPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
P VV YN +I + N + A +L+ EM K + PN +T +++ ++G L
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSL 246
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)
Query: 24 KHYSTAISLSRQMEITGITPSL--VTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTI 81
K +S +S+ +E+ G+ P +T + +I+ G A +L++ P +
Sbjct: 380 KGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSY 439
Query: 82 TFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQI 141
TF++++ ++ LQ H V+ + +L++ CK G T+ A + I
Sbjct: 440 TFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI 499
Query: 142 EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVG 199
PN+V YNT+I + A L+S + G PN VT+ AL+ VG
Sbjct: 500 SE----PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 41 ITPSLVTLSILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGL--CLRGN-VH 97
+ P +V + ++N Q AF VL + +RG +P+ +T+ +++ + C + N VH
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVH 648
Query: 98 ---RALQFHDVVLAQGFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYN 154
R +Q + N ++Y L+N L K G++ A+ + +E + I+ + +Y
Sbjct: 649 EFFRKMQKSSIP-------NALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYY 701
Query: 155 TIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ LC + N+ ++ P VVTY LI G +K A + D+
Sbjct: 702 DLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQ 757
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 12 EFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANI 71
EFN VL L + K ++ L + T SI+ +G+ A + +
Sbjct: 105 EFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKIL 164
Query: 72 LKRGFQPTTITFTTLIKGLCLRGNVHRAL---QFHDVVLAQGFRLNQVS-YGTLINGLCK 127
K T T +I LC RG+V RAL H V++ N++S Y +L+ G
Sbjct: 165 DKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISG----NELSVYRSLLFGWSV 220
Query: 128 MGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDN-------LVSHACNLYSEMIVKG 180
A ++ ++ I P++ +N+++ LC+ N LV A N+ EM
Sbjct: 221 QRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYK 280
Query: 181 ISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
I P ++YN L+ +++++ +L++
Sbjct: 281 IQPTSMSYNILLSCLGRTRRVRESCQILEQ 310
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 6 ITPPIIEFNKVLTSLVK---TKHYS----TAISLSRQMEITGITPSLVTLSILINCHCYL 58
ITP + FN +LT L + ++ S A+++ +M I P+ ++ +IL++C
Sbjct: 239 ITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRT 298
Query: 59 GQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
+ + +L + + G P T ++ +++ L L G + Q D ++ +GFR + Y
Sbjct: 299 RRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFY 358
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMI 177
LI LC + + AL+ +++ + +Y+ +I LCK L+ E +
Sbjct: 359 YDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEAL 417
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 87/200 (43%), Gaps = 7/200 (3%)
Query: 11 IEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLAN 70
+ +N +++ V+ + A+ + R+M+ + P T+ L+N YLG + +
Sbjct: 224 VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEY 283
Query: 71 ILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVS-YGTLINGLCKMG 129
I++ F+ +I T LI C G + L + + Q+S + ++I GL G
Sbjct: 284 IVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK-----QLSCWNSMILGLANNG 338
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG-ISPNVVTY 188
A++ ++E + P+ V + ++ + V A + M K I P++ Y
Sbjct: 339 FEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHY 398
Query: 189 NALIYGFCIVGQLKQAIGLL 208
++ G L++A L+
Sbjct: 399 TLMVNVLGGAGLLEEAEALI 418
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 26/217 (11%)
Query: 12 EFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILI-------NCHCY----LGQ 60
E ++ SL+KT S ++ SR + +PS + + L+ N + G
Sbjct: 40 ELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGF 99
Query: 61 TTSAF-----SVLANIL--KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRL 113
+ S+F S+ ++L +P +T+ ++ K G Q H +V+ +G
Sbjct: 100 SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLED 159
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
+ T+++ G +E R G +I +VV +N++I K L+ A NL+
Sbjct: 160 DSFIRNTMLHMYVTCG---CLIEAWRIFLG-MIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
EM + N V++N++I GF G+ K A+ + E
Sbjct: 216 DEMPQR----NGVSWNSMISGFVRNGRFKDALDMFRE 248
>AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:744026-746407 REVERSE
LENGTH=793
Length = 793
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 16 VLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANILKRG 75
V+ + + A L +M + G+ S L+ +C QT S+L + K G
Sbjct: 502 VINACISLGMLDQAHDLLDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSLLRDAQKAG 561
Query: 76 FQPTTITFTTLIKGLCLRGNVHRALQ-FHDVVLAQGFRLNQVSYGTLINGLCKMGETSAA 134
Q + + LI+ ++ + H AL F ++ A+ R + L+ G E
Sbjct: 562 IQLDSSCYEALIQSQVIQNDTHGALNVFKEMKEAKILRGGNQKFEKLLKGCEGNAEAGLM 621
Query: 135 LEFLRQI-EGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIY 193
+ LR+I E Q + V +N +I K L+ A M G SPN T+++++
Sbjct: 622 SKLLREIREVQSLDAGVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVT 681
Query: 194 GFCIVG 199
G+ +G
Sbjct: 682 GYAAIG 687
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 44/237 (18%)
Query: 8 PPIIEFNKVLTSLVKTKHYSTAISLSRQMEI-TGITPSLVTLSILINCHCYLGQTTSAFS 66
P +I + VL++ K Y A+ L M G+ P T ++ L +
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 67 VLANILKRGFQPTTITFTTLIK--GLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLING 124
+ ++ G + ++L+ G C G+V A Q V + N VS+ L+ G
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKC--GSVREARQ----VFNGMSKKNSVSWSALLGG 340
Query: 125 LCKMGETSAALEFLRQIE---------------------------GQLI----IPNVVMY 153
C+ GE A+E R++E GQ + NV++
Sbjct: 341 YCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE 400
Query: 154 NTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+ +ID K + A +YS+M ++ N++T+NA++ G+ ++A+ ++
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSIR----NMITWNAMLSALAQNGRGEEAVSFFND 453
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLANIL 72
+N VL SL++ I++ ++M+ G + T +I+I+C + SA ++++ ++
Sbjct: 560 YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMI 619
Query: 73 KRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLI 122
+ GF P +TFT L+K L N AL D + L+ +SY T++
Sbjct: 620 RDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTIL 669
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 13 FNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSIL------INCHCYLGQTTSAF- 65
FN +L + A+ + +M+ + P + T +L +N G S
Sbjct: 438 FNNLLAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVD 497
Query: 66 ------SVLANILKRGFQPTTITFTTLIKGLCLRGNVH---RALQFHDVVLAQG-FRLNQ 115
++ ++++ GFQ + I+ +++ L G V+ R LQ + + A L
Sbjct: 498 CCKRINAIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGT 557
Query: 116 VSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSE 175
+Y +++ L + ET + ++++ +V YN +ID + AC L S
Sbjct: 558 PTYNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSM 617
Query: 176 MIVKGISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
MI G SP VT+ AL+ ++A+ LLD+
Sbjct: 618 MIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQ 652
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 93/213 (43%), Gaps = 7/213 (3%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
+ +M I+ +N +++ + A+ L +M +TP+ VT++ L + LG
Sbjct: 399 VFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGS 458
Query: 61 TTSAFSVLANILKRGFQPTTITF--TTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
S+ A +K GF ++ T L+ G+ A D + + N +++
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK----NTITW 514
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
+I G K G+T +LE ++ + PN + +I+ + +V+ +S M
Sbjct: 515 SAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYK 574
Query: 179 K-GISPNVVTYNALIYGFCIVGQLKQAIGLLDE 210
+P+ Y ++ G+L+QA+ ++++
Sbjct: 575 DYNFTPSTKHYTCMVDMLARAGELEQALDIIEK 607
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 50 ILINCHCYLGQTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ 109
++++ + T+ A + K P F L+ LC G++ +A +F + +
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM-LASKK 252
Query: 110 GFRLNQVSYGTLINGLCKMG-ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSH 168
F ++ + ++NG C + + + A R++ I PN Y+ +I K +
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 169 ACNLYSEMIVKGISPNVVTYNALIY 193
+ LY EM +G++P + YN+L+Y
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVY 337
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 4/184 (2%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQ 60
M + + P I +N ++ L + + A+ L +++ G+ P VT + +I C G+
Sbjct: 320 MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGK 379
Query: 61 TTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGT 120
A +VLA ++ PT TF ++ + N + L+ + + ++
Sbjct: 380 LDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLL 435
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
++ L K + AL+ +++ I+ N +Y I L + A +YSEM KG
Sbjct: 436 ILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG 495
Query: 181 ISPN 184
N
Sbjct: 496 FVGN 499
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%)
Query: 114 NQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLY 173
N+ SY +I+ K+G +L +++ + + P + +YN+++ L +++ A L
Sbjct: 293 NKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLM 352
Query: 174 SEMIVKGISPNVVTYNALIYGFCIVGQLKQAIGLL 208
++ +G+ P+ VTYN++I C G+L A +L
Sbjct: 353 KKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVL 387
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 10/210 (4%)
Query: 1 MLQMRITPPIIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVT-LSILINCHCYLG 59
M + + TP F +L +L + H A + + P V ++++N C +
Sbjct: 215 MDKFKHTPYDEAFQGLLCALCRHGHIEKAEEF--MLASKKLFPVDVEGFNVILNGWCNIW 272
Query: 60 -QTTSAFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSY 118
T A + + P +++ +I GN+ +L+ +D + +G Y
Sbjct: 273 TDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVY 332
Query: 119 GTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIV 178
+L+ L + A++ ++++ + + P+ V YN++I LC+ + A N+ + MI
Sbjct: 333 NSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMIS 392
Query: 179 KGISPNVVTYNALIYG------FCIVGQLK 202
+ +SP V T++A + ++GQ+K
Sbjct: 393 ENLSPTVDTFHAFLEAVNFEKTLEVLGQMK 422
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 8/178 (4%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ +N +L+ V + H A + ++M+ I ++ +S L G + +
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAEN----GFGEEGLKLFS 406
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ + GF+P F+ IK + G Q+H +L GF + +S G N L M
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD-SSLSAG---NALITMY 462
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVT 187
+E RQ+ + + V +N +I +L + + A ++Y EM+ KGI P+ +T
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLIN 123
A +V NI+ GFQP LI C ++ A Q D + ++++ T+++
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP----DKIARTTMVS 88
Query: 124 GLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISP 183
G C G+ + A + + + + VMYN +I +N A NL+ +M +G P
Sbjct: 89 GYCASGDITLARGVFEK--APVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 184 NVVTYNALIYGFCIVG 199
+ T+ +++ G +V
Sbjct: 147 DNFTFASVLAGLALVA 162
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
+I + ++ VK + A+ R+M+I+G+ P V + +N LG + V
Sbjct: 171 LISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHR 230
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+L + F+ +LI C G V A Q V + VS+ ++I G G
Sbjct: 231 YVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ----VFYNMEKRTVVSWNSVIVGFAANG 286
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVK-GISPNVVTY 188
+L + R+++ + P+ V + + + LV + M ISP + Y
Sbjct: 287 NAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHY 346
Query: 189 NALIYGFCIVGQLKQAIGLL 208
L+ + G+L+ A+ L+
Sbjct: 347 GCLVDLYSRAGRLEDALKLV 366
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 51 LINCHCYLGQTTSAFSVLANILKRGF-QPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQ 109
LI + +G + SAFS+ + G +P T T+ LIK + +V H VV+
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 110 GFRLNQVSYGTLINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHA 169
GF +L++ G+ ++A + ++ + ++V +N++I+ ++ A
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNSVINGFAENGKPEEA 206
Query: 170 CNLYSEMIVKGISPNVVTYNALIYGFCIVGQL 201
LY+EM KGI P+ T +L+ +G L
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 54.7 bits (130), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 10 IIEFNKVLTSLVKTKHYSTAISLSRQMEITGITPSLVTLSILINCHCYLGQTTSAFSVLA 69
++ + +L+ KT + A L M I L+ + C + A+++
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCR----RMNEAWTLFR 132
Query: 70 NILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYGTLINGLCKMG 129
+ K +++T ++ LC G A++ D + + N VS+ TL+ GL + G
Sbjct: 133 EMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNG 183
Query: 130 ETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKGISPNVVTYN 189
+ A +Q+ + +VV +N +I +++ + A L+ +M K NVVT+
Sbjct: 184 DMEKA----KQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWT 235
Query: 190 ALIYGFCIVGQLKQAIGLLDE 210
+++YG+C G +++A L E
Sbjct: 236 SMVYGYCRYGDVREAYRLFCE 256
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 64 AFSVLANILKRGFQPTTITFTTLIKGLCLRGNVHRALQFHDVVLAQGFRLNQVSYG---T 120
A S+L+++++ G +P T++ L+ N+ + H V+ Y
Sbjct: 450 AASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAK-----TTACYDPDLI 504
Query: 121 LINGLCKMGETSAALEFLRQIEGQLIIPNVVMYNTIIDSLCKDNLVSHACNLYSEMIVKG 180
L N L M A+E +I +++ + V +N++I L L A NL+ EM+ G
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG 564
Query: 181 ISPNVVTY 188
PN VT+
Sbjct: 565 KKPNSVTF 572