Miyakogusa Predicted Gene

Lj0g3v0075149.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0075149.1 Non Chatacterized Hit- tr|C5WXZ6|C5WXZ6_SORBI
Putative uncharacterized protein Sb01g047200
OS=Sorghu,49.12,0.00000003,DENN,DENN domain; SUPPRESSION OF
TUMORIGENICITY 5 (ST5),NULL;
seg,NULL,gene.Ljchr0_pseudomol_20120828.path1.gene7058.1
         (532 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G35560.1 | Symbols:  | DENN (AEX-3) domain-containing protein...   355   4e-98
AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein...   210   2e-54

>AT5G35560.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
           chr5:13742458-13747464 REVERSE LENGTH=765
          Length = 765

 Score =  355 bits (911), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 194/405 (47%), Positives = 251/405 (61%), Gaps = 42/405 (10%)

Query: 131 DALETNKKSKDSHLPHAILPLLRNCQYX--XXXXXXXIQGSPCEDKNFRSEIDDNETEDA 188
           D+L   K+ ++S LP    PLLR C Y           Q +PCE ++ R+  DD ET++A
Sbjct: 379 DSLPIIKQGRESCLPEPG-PLLR-CPYLDEISDSSTSFQAAPCERRHSRTSADDTETDEA 436

Query: 189 SFSGQEDINDLNDILQWAKEHNHGPLQIISEYYRLSCPARGSTLTFXXXXXXXXXXYHRP 248
           SFSGQ+D +   DIL+WAK   +G LQI+ EYY+L CPARGST+TF          YHRP
Sbjct: 437 SFSGQDDTSSNFDILEWAKSKKNGSLQILCEYYQLKCPARGSTITFHPLEHLHPVEYHRP 496

Query: 249 AGTVPHLVGSTVDLKACNAGQELANAHNSLLVED-ATALSIWTVACICGILRLENFYNWI 307
                H  GS +DL++C+   ELA AH +L+ E+ A ALS W VA +CG LRL+N     
Sbjct: 497 NEVALHTPGSAIDLRSCSTSLELAEAHTTLMAEEEAAALSTWAVASLCGSLRLDNV---- 552

Query: 308 GLTDCVSVLHSAGVNILCRSSAREADSCSLFEFGNPICFSFISYSTNPALPMAKPTNAKY 367
            L      L    +  +C +                     ++ S    +P+ +P   + 
Sbjct: 553 -LMILAGALLEKQIVFVCSN------------------LGILAASVLSIIPVIRPFRWQS 593

Query: 368 DLQ-VLPSDMHEFLDAPVPYVVGITNKNSEVQSKFANVILVDADRNQINSTFFSDHVEWE 426
            L  VLP DM EFLDAPVPY+VG+ NK SEVQSK  NVI+VD  +NQ             
Sbjct: 594 LLMPVLPDDMLEFLDAPVPYIVGVKNKTSEVQSKLTNVIVVDILKNQ------------- 640

Query: 427 VKSPTIPQLPRQKELVSSLRSYHATLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYL 486
           VKSP++PQLP+ ++L ++L  YH+ LVGESYL ++RPVYECT+VQ++AAKGF+ VLRSYL
Sbjct: 641 VKSPSMPQLPQYRDLYNALSPYHSKLVGESYLAKKRPVYECTDVQVDAAKGFMDVLRSYL 700

Query: 487 DSLCYNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRAFMKVI 531
           DSLC N++SHTITNVQSN+DKVSLLLKESFIDSFP R R FMK+ 
Sbjct: 701 DSLCSNLQSHTITNVQSNNDKVSLLLKESFIDSFPSRQRPFMKLF 745


>AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
            chr2:8767082-8772271 FORWARD LENGTH=1029
          Length = 1029

 Score =  210 bits (534), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/338 (38%), Positives = 183/338 (54%), Gaps = 44/338 (13%)

Query: 197  NDLND--ILQWAKEHNHGPLQIISEYYRLSCPARGSTLTFXXXXXXXXXXYHRPAGTVPH 254
            ND  D  IL+WAK+HN+  LQ++  Y+ L+ P+RGS + F          Y RP  +   
Sbjct: 711  NDFGDDLILEWAKDHNNDSLQLVCGYHSLAIPSRGSEVVFHPLEHLQSISYTRPPVSALG 770

Query: 255  LVGSTVDLKACNAGQELANAHNSLLVEDATALSIWTVACICGILRLENFYNWIGLTDCVS 314
            L    +    C++  +  NA  +   E+A  LS+WT A +C IL LE   + +       
Sbjct: 771  LSEEYI----CSSDSKEINARLAA-AEEAMGLSMWTTATVCRILSLETIMSLLA-----G 820

Query: 315  VLHSAGVNILCRSSAREADSCSLFEFGNPICFSFISYSTNPALPMAKPTNAK-YDLQVLP 373
            VL    + I+C +                     +S      +PM +P   +   L VLP
Sbjct: 821  VLLEKQIVIICPN------------------LGVLSAIVLSLVPMIRPFQWQSLLLPVLP 862

Query: 374  SDMHEFLDAPVPYVVGITNKNSEVQSKFANVILVDADRNQINSTFFSDHVEWEVKSPTIP 433
              M +FL+APVP++VGI +K  + + K +N+ILV+   NQ             VK   +P
Sbjct: 863  GRMFDFLEAPVPFLVGIHSKPIDWKVKTSNLILVNILNNQ-------------VKICNMP 909

Query: 434  QLPRQKELVSSLRSYHATLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCYNI 493
             LP+ +EL++ L   HATL  +S   RR PVY+C EVQ EAA  FL V+R Y++SLC ++
Sbjct: 910  ALPQCRELMAQLAPIHATLAHQSSNARRHPVYKCNEVQAEAATKFLRVMRDYMESLCSDL 969

Query: 494  RSHTITNVQSNDDKVSLLLKESFIDSFPYRDRAFMKVI 531
             SHTIT+VQSN D+VSLLLK+SFIDSFP RDR F+K+ 
Sbjct: 970  HSHTITSVQSNSDRVSLLLKDSFIDSFPGRDRPFIKLF 1007