Miyakogusa Predicted Gene

Lj0g3v0074579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0074579.1 Non Chatacterized Hit- tr|I1N5E8|I1N5E8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,93.1,0.000002,
,CUFF.3728.1
         (52 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G43160.4 | Symbols:  | ENTH/VHS family protein | chr2:1794888...    54   2e-08
AT2G43160.1 | Symbols:  | ENTH/VHS family protein | chr2:1794888...    54   2e-08
AT2G43160.2 | Symbols:  | ENTH/VHS family protein | chr2:1794888...    54   2e-08
AT2G43160.3 | Symbols:  | ENTH/VHS family protein | chr2:1794888...    54   2e-08
AT3G59290.1 | Symbols:  | ENTH/VHS family protein | chr3:2191279...    50   3e-07

>AT2G43160.4 | Symbols:  | ENTH/VHS family protein |
          chr2:17948884-17952920 FORWARD LENGTH=646
          Length = 646

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/29 (86%), Positives = 26/29 (89%)

Query: 1  MKKVIGQIVRDLKREVNKKVLKVTGIEQK 29
          MKKV GQ VRDLKREVNKKVLKV G+EQK
Sbjct: 1  MKKVFGQTVRDLKREVNKKVLKVPGVEQK 29


>AT2G43160.1 | Symbols:  | ENTH/VHS family protein |
          chr2:17948884-17953267 FORWARD LENGTH=895
          Length = 895

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/29 (86%), Positives = 26/29 (89%)

Query: 1  MKKVIGQIVRDLKREVNKKVLKVTGIEQK 29
          MKKV GQ VRDLKREVNKKVLKV G+EQK
Sbjct: 1  MKKVFGQTVRDLKREVNKKVLKVPGVEQK 29


>AT2G43160.2 | Symbols:  | ENTH/VHS family protein |
          chr2:17948884-17953267 FORWARD LENGTH=895
          Length = 895

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/29 (86%), Positives = 26/29 (89%)

Query: 1  MKKVIGQIVRDLKREVNKKVLKVTGIEQK 29
          MKKV GQ VRDLKREVNKKVLKV G+EQK
Sbjct: 1  MKKVFGQTVRDLKREVNKKVLKVPGVEQK 29


>AT2G43160.3 | Symbols:  | ENTH/VHS family protein |
          chr2:17948884-17953267 FORWARD LENGTH=895
          Length = 895

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/29 (86%), Positives = 26/29 (89%)

Query: 1  MKKVIGQIVRDLKREVNKKVLKVTGIEQK 29
          MKKV GQ VRDLKREVNKKVLKV G+EQK
Sbjct: 1  MKKVFGQTVRDLKREVNKKVLKVPGVEQK 29


>AT3G59290.1 | Symbols:  | ENTH/VHS family protein |
          chr3:21912796-21917474 FORWARD LENGTH=1024
          Length = 1024

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/29 (82%), Positives = 24/29 (82%)

Query: 1  MKKVIGQIVRDLKREVNKKVLKVTGIEQK 29
          MKK  GQ VRDLKR VNKKVLKV GIEQK
Sbjct: 1  MKKAFGQTVRDLKRGVNKKVLKVPGIEQK 29