Miyakogusa Predicted Gene

Lj0g3v0074139.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0074139.1 Non Chatacterized Hit- tr|B9G1U6|B9G1U6_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,64.91,3e-18,seg,NULL,CUFF.3705.1
         (120 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G24395.1 | Symbols:  | chaperone protein dnaJ-related | chr2:...   127   1e-30

>AT2G24395.1 | Symbols:  | chaperone protein dnaJ-related |
           chr2:10375497-10376081 FORWARD LENGTH=132
          Length = 132

 Score =  127 bits (320), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 68/94 (72%), Gaps = 7/94 (7%)

Query: 32  FIKPLHCVPIHQQF-------DADSDATIVCEPCNGKGWLLCDFCKGQKTNVKADNKRVY 84
             KP  CVP+ +Q          D +A I+CE CNGKGWLLCDFCKGQKTNVK++N R+Y
Sbjct: 37  LFKPFRCVPLQEQEPQLDQSQQGDDNAVILCEDCNGKGWLLCDFCKGQKTNVKSENNRIY 96

Query: 85  RRCPSCRAVGYVLCPSCKVFKCVTFPNFNDAQSL 118
           RRCP+C+AVG+VLC  CKVFKCVTFPN  D   L
Sbjct: 97  RRCPTCKAVGFVLCRKCKVFKCVTFPNSEDGDEL 130