Miyakogusa Predicted Gene

Lj0g3v0074089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0074089.1 tr|Q00WR4|Q00WR4_OSTTA Adaptin family protein
(ISS) OS=Ostreococcus tauri GN=Ot13g02690 PE=4
SV=1,35.71,6e-17,seg,NULL; Subdomain of clathrin and coatomer
appendage domain,Coatomer/calthrin adaptor appendage, C,CUFF.3782.1
         (214 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22770.2 | Symbols: alpha-ADR | alpha-adaptin | chr5:7579844-...   306   7e-84
AT5G22770.3 | Symbols: alpha-ADR | alpha-adaptin | chr5:7579844-...   306   7e-84
AT5G22770.1 | Symbols: alpha-ADR | alpha-adaptin | chr5:7579844-...   306   7e-84
AT5G22780.1 | Symbols:  | Adaptor protein complex AP-2, alpha su...   306   8e-84

>AT5G22770.2 | Symbols: alpha-ADR | alpha-adaptin |
            chr5:7579844-7588026 REVERSE LENGTH=1012
          Length = 1012

 Score =  306 bits (784), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 148/214 (69%), Positives = 174/214 (81%)

Query: 1    MELSLVPETIPPRAQVQCPLEVINLHPSRDVSVLDFSYKFGNEMVNVKLRVPAVLNKFLQ 60
            ++LS VP+TIPPRAQVQ PLEV+N+ PSRDV+VLDFSYKFG  +V+ KLR+PA LNKFLQ
Sbjct: 799  LDLSPVPDTIPPRAQVQSPLEVMNIRPSRDVAVLDFSYKFGANVVSAKLRIPATLNKFLQ 858

Query: 61   PITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPLPEMANLFNSYHLTVCPGLDPNPNNL 120
            P+ +++EEFFPQWR++ GPPLKLQEVVRGVRPL LPEMANLFNS+H+T+CPGLDPNPNNL
Sbjct: 859  PLQLTSEEFFPQWRAISGPPLKLQEVVRGVRPLALPEMANLFNSFHVTICPGLDPNPNNL 918

Query: 121  VISTTFYSESTRAMLCLIRIETDPADRTQLRMTVASGDPALTFEMKEFVKEQLVIIXXXX 180
            V STTFYSEST A+LCL RIETDPADRTQLRMTV +GDP LTFE+KEF+KEQL+ +    
Sbjct: 919  VASTTFYSESTGAILCLARIETDPADRTQLRMTVGTGDPTLTFELKEFIKEQLITVPMGS 978

Query: 181  XXXXXXXXXXXLVAQLAIAPATTNDPGALLAALL 214
                        VAQ     A  +DPGA+LA LL
Sbjct: 979  RALVPAAGPAPPVAQPPSPAALADDPGAMLAGLL 1012


>AT5G22770.3 | Symbols: alpha-ADR | alpha-adaptin |
            chr5:7579844-7588026 REVERSE LENGTH=1012
          Length = 1012

 Score =  306 bits (784), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 148/214 (69%), Positives = 174/214 (81%)

Query: 1    MELSLVPETIPPRAQVQCPLEVINLHPSRDVSVLDFSYKFGNEMVNVKLRVPAVLNKFLQ 60
            ++LS VP+TIPPRAQVQ PLEV+N+ PSRDV+VLDFSYKFG  +V+ KLR+PA LNKFLQ
Sbjct: 799  LDLSPVPDTIPPRAQVQSPLEVMNIRPSRDVAVLDFSYKFGANVVSAKLRIPATLNKFLQ 858

Query: 61   PITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPLPEMANLFNSYHLTVCPGLDPNPNNL 120
            P+ +++EEFFPQWR++ GPPLKLQEVVRGVRPL LPEMANLFNS+H+T+CPGLDPNPNNL
Sbjct: 859  PLQLTSEEFFPQWRAISGPPLKLQEVVRGVRPLALPEMANLFNSFHVTICPGLDPNPNNL 918

Query: 121  VISTTFYSESTRAMLCLIRIETDPADRTQLRMTVASGDPALTFEMKEFVKEQLVIIXXXX 180
            V STTFYSEST A+LCL RIETDPADRTQLRMTV +GDP LTFE+KEF+KEQL+ +    
Sbjct: 919  VASTTFYSESTGAILCLARIETDPADRTQLRMTVGTGDPTLTFELKEFIKEQLITVPMGS 978

Query: 181  XXXXXXXXXXXLVAQLAIAPATTNDPGALLAALL 214
                        VAQ     A  +DPGA+LA LL
Sbjct: 979  RALVPAAGPAPPVAQPPSPAALADDPGAMLAGLL 1012


>AT5G22770.1 | Symbols: alpha-ADR | alpha-adaptin |
            chr5:7579844-7588026 REVERSE LENGTH=1012
          Length = 1012

 Score =  306 bits (784), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 148/214 (69%), Positives = 174/214 (81%)

Query: 1    MELSLVPETIPPRAQVQCPLEVINLHPSRDVSVLDFSYKFGNEMVNVKLRVPAVLNKFLQ 60
            ++LS VP+TIPPRAQVQ PLEV+N+ PSRDV+VLDFSYKFG  +V+ KLR+PA LNKFLQ
Sbjct: 799  LDLSPVPDTIPPRAQVQSPLEVMNIRPSRDVAVLDFSYKFGANVVSAKLRIPATLNKFLQ 858

Query: 61   PITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPLPEMANLFNSYHLTVCPGLDPNPNNL 120
            P+ +++EEFFPQWR++ GPPLKLQEVVRGVRPL LPEMANLFNS+H+T+CPGLDPNPNNL
Sbjct: 859  PLQLTSEEFFPQWRAISGPPLKLQEVVRGVRPLALPEMANLFNSFHVTICPGLDPNPNNL 918

Query: 121  VISTTFYSESTRAMLCLIRIETDPADRTQLRMTVASGDPALTFEMKEFVKEQLVIIXXXX 180
            V STTFYSEST A+LCL RIETDPADRTQLRMTV +GDP LTFE+KEF+KEQL+ +    
Sbjct: 919  VASTTFYSESTGAILCLARIETDPADRTQLRMTVGTGDPTLTFELKEFIKEQLITVPMGS 978

Query: 181  XXXXXXXXXXXLVAQLAIAPATTNDPGALLAALL 214
                        VAQ     A  +DPGA+LA LL
Sbjct: 979  RALVPAAGPAPPVAQPPSPAALADDPGAMLAGLL 1012


>AT5G22780.1 | Symbols:  | Adaptor protein complex AP-2, alpha subunit
            | chr5:7590100-7597828 REVERSE LENGTH=1013
          Length = 1013

 Score =  306 bits (783), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 148/215 (68%), Positives = 174/215 (80%), Gaps = 1/215 (0%)

Query: 1    MELSLVPETIPPRAQVQCPLEVINLHPSRDVSVLDFSYKFGNEMVNVKLRVPAVLNKFLQ 60
            ++LS VP+TIPPRAQVQ PLEV+N+ PSRDV+VLDFSYKFG  +V+ KLR+PA LNKFLQ
Sbjct: 799  LDLSPVPDTIPPRAQVQSPLEVMNIRPSRDVAVLDFSYKFGTNVVSAKLRIPATLNKFLQ 858

Query: 61   PITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPLPEMANLFNSYHLTVCPGLDPNPNNL 120
            P+ +++EEFFPQWR++ GPPLKLQEVVRGVRPL LPEMANLFNS+H+T+CPGLDPNPNNL
Sbjct: 859  PLQLTSEEFFPQWRAISGPPLKLQEVVRGVRPLALPEMANLFNSFHVTICPGLDPNPNNL 918

Query: 121  VISTTFYSESTRAMLCLIRIETDPADRTQLRMTVASGDPALTFEMKEFVKEQLVIIXXXX 180
            V STTFYSE+T AMLCL RIETDPADRTQLR+TV SGDP LTFE+KEF+KEQL+ I    
Sbjct: 919  VASTTFYSETTGAMLCLARIETDPADRTQLRLTVGSGDPTLTFELKEFIKEQLITIPMGS 978

Query: 181  XXXXXXXXXXXLVAQLAIAPAT-TNDPGALLAALL 214
                         A    +PA   +DPGA+LA LL
Sbjct: 979  RALVPAAGPAPSPAVQPPSPAALADDPGAMLAGLL 1013