Miyakogusa Predicted Gene

Lj0g3v0073989.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0073989.1 Non Chatacterized Hit- tr|I0Z0M1|I0Z0M1_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,34.85,1e-17,seg,NULL; OLIGOPEPTIDASE,NULL; PROTEASE M3 THIMET
OLIGOPEPTIDASE-RELATED,NULL,CUFF.3704.1
         (235 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67700.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   292   2e-79
AT1G67700.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   291   2e-79
AT1G67700.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   286   9e-78

>AT1G67700.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast,
           chloroplast envelope; EXPRESSED IN: 22 plant structures;
           EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to
           49 proteins in 20 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
           Eukaryotes - 5 (source: NCBI BLink). |
           chr1:25374295-25375810 FORWARD LENGTH=231
          Length = 231

 Score =  292 bits (747), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 143/214 (66%), Positives = 167/214 (78%), Gaps = 2/214 (0%)

Query: 1   MEVGMSLNALVRLPLSSSTSRLHDDPSLKXXXXXXXXXXXXXXXXXXXXXXVVEAKGKKG 60
           MEV MSLNAL RLPL + T R  +    +                      VVEAKGKKG
Sbjct: 1   MEVSMSLNALTRLPLKN-TGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKG 59

Query: 61  MMSRQYQRXXXXXXXKIEEDGNPKFVLFIRMANVYLWYPLSIVTGGTTAKIMVAAKDNFL 120
           M +RQYQR       KIE+DGNP+FV+FIRMANVYLWYPLSI+ GGTTAKIMVAAKDN L
Sbjct: 60  MAARQYQRTPPPMP-KIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLL 118

Query: 121 GKYIYKDTLARNLAAVIYQDEKEVQKSAFKQYRVLRSATDFRYGYKLIENGNVRGALSTT 180
           GKYIYKDT+ARN+AAVIY+DEKE+QK+A KQ+RVLR+AT+FRYGYKL+ENGN+R ALST+
Sbjct: 119 GKYIYKDTIARNIAAVIYRDEKEIQKTAIKQHRVLRTATEFRYGYKLVENGNMRAALSTS 178

Query: 181 DVIELPTQDKLKTVLDNVKDFFGDAKESFGKITT 214
           DVIELPTQD+LKTV D VKD+FGDAKESFGK+++
Sbjct: 179 DVIELPTQDQLKTVFDKVKDYFGDAKESFGKLSS 212


>AT1G67700.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast,
           chloroplast envelope; EXPRESSED IN: 22 plant structures;
           EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to
           49 proteins in 20 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
           Eukaryotes - 5 (source: NCBI BLink). |
           chr1:25374295-25375716 FORWARD LENGTH=230
          Length = 230

 Score =  291 bits (746), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 143/214 (66%), Positives = 167/214 (78%), Gaps = 2/214 (0%)

Query: 1   MEVGMSLNALVRLPLSSSTSRLHDDPSLKXXXXXXXXXXXXXXXXXXXXXXVVEAKGKKG 60
           MEV MSLNAL RLPL + T R  +    +                      VVEAKGKKG
Sbjct: 1   MEVSMSLNALTRLPLKN-TGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKG 59

Query: 61  MMSRQYQRXXXXXXXKIEEDGNPKFVLFIRMANVYLWYPLSIVTGGTTAKIMVAAKDNFL 120
           M +RQYQR       KIE+DGNP+FV+FIRMANVYLWYPLSI+ GGTTAKIMVAAKDN L
Sbjct: 60  MAARQYQRTPPPMP-KIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLL 118

Query: 121 GKYIYKDTLARNLAAVIYQDEKEVQKSAFKQYRVLRSATDFRYGYKLIENGNVRGALSTT 180
           GKYIYKDT+ARN+AAVIY+DEKE+QK+A KQ+RVLR+AT+FRYGYKL+ENGN+R ALST+
Sbjct: 119 GKYIYKDTIARNIAAVIYRDEKEIQKTAIKQHRVLRTATEFRYGYKLVENGNMRAALSTS 178

Query: 181 DVIELPTQDKLKTVLDNVKDFFGDAKESFGKITT 214
           DVIELPTQD+LKTV D VKD+FGDAKESFGK+++
Sbjct: 179 DVIELPTQDQLKTVFDKVKDYFGDAKESFGKLSS 212


>AT1G67700.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages. |
           chr1:25374295-25375716 FORWARD LENGTH=229
          Length = 229

 Score =  286 bits (732), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 143/214 (66%), Positives = 166/214 (77%), Gaps = 3/214 (1%)

Query: 1   MEVGMSLNALVRLPLSSSTSRLHDDPSLKXXXXXXXXXXXXXXXXXXXXXXVVEAKGKKG 60
           MEV MSLNAL RLPL + T R  +    +                      VVEAKGKKG
Sbjct: 1   MEVSMSLNALTRLPLKN-TGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKG 59

Query: 61  MMSRQYQRXXXXXXXKIEEDGNPKFVLFIRMANVYLWYPLSIVTGGTTAKIMVAAKDNFL 120
           M +RQYQR       KIE+DGNP+FV+FIRMANVYLWYPLSI+ GGTTAKIMVAAKDN L
Sbjct: 60  MAARQYQRTPPPMP-KIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLL 118

Query: 121 GKYIYKDTLARNLAAVIYQDEKEVQKSAFKQYRVLRSATDFRYGYKLIENGNVRGALSTT 180
           GKYIYKDT+ARN+AAVIY+DEKE+QK+A KQ+RVLR+AT+FRYGYKL ENGN+R ALST+
Sbjct: 119 GKYIYKDTIARNIAAVIYRDEKEIQKTAIKQHRVLRTATEFRYGYKL-ENGNMRAALSTS 177

Query: 181 DVIELPTQDKLKTVLDNVKDFFGDAKESFGKITT 214
           DVIELPTQD+LKTV D VKD+FGDAKESFGK+++
Sbjct: 178 DVIELPTQDQLKTVFDKVKDYFGDAKESFGKLSS 211