Miyakogusa Predicted Gene
- Lj0g3v0073339.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0073339.1 Non Chatacterized Hit- tr|H2UWP8|H2UWP8_TAKRU
Uncharacterized protein OS=Takifugu rubripes GN=FBXL20,26.03,3e-18,no
description,NULL; SUBFAMILY NOT NAMED,NULL; F-BOX/LEUCINE RICH REPEAT
PROTEIN,NULL; LRR_6,NULL; F,CUFF.3781.1
(687 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1... 620 e-177
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr... 597 e-170
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 163 4e-40
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 132 6e-31
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 108 2e-23
AT5G01720.1 | Symbols: | RNI-like superfamily protein | chr5:26... 104 2e-22
AT4G33210.1 | Symbols: SLOMO | F-box family protein | chr4:16015... 94 3e-19
AT3G58530.1 | Symbols: | RNI-like superfamily protein | chr3:21... 80 4e-15
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei... 78 3e-14
AT2G06040.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-ri... 76 9e-14
AT1G80570.1 | Symbols: | RNI-like superfamily protein | chr1:30... 75 1e-13
AT1G80570.3 | Symbols: | RNI-like superfamily protein | chr1:30... 75 1e-13
AT1G80570.2 | Symbols: | RNI-like superfamily protein | chr1:30... 75 2e-13
AT1G55590.1 | Symbols: | RNI-like superfamily protein | chr1:20... 74 5e-13
AT3G07550.2 | Symbols: | RNI-like superfamily protein | chr3:24... 72 1e-12
AT3G07550.1 | Symbols: | RNI-like superfamily protein | chr3:24... 72 1e-12
AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 | chr5... 70 3e-12
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting prote... 70 5e-12
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276... 69 8e-12
AT1G80630.1 | Symbols: | RNI-like superfamily protein | chr1:30... 68 3e-11
AT2G17020.1 | Symbols: | F-box/RNI-like superfamily protein | c... 66 8e-11
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch... 65 1e-10
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr... 65 1e-10
AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 | chr4:41978... 65 2e-10
AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 | chr3:18572... 64 3e-10
AT5G07670.1 | Symbols: | RNI-like superfamily protein | chr5:24... 60 4e-09
AT4G30640.1 | Symbols: | RNI-like superfamily protein | chr4:14... 59 2e-08
AT5G21900.1 | Symbols: | RNI-like superfamily protein | chr5:72... 57 4e-08
AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr... 56 1e-07
AT1G15740.1 | Symbols: | Leucine-rich repeat family protein | c... 52 2e-06
AT2G42620.1 | Symbols: MAX2, ORE9, PPS | RNI-like superfamily pr... 52 2e-06
AT5G51380.1 | Symbols: | RNI-like superfamily protein | chr5:20... 52 2e-06
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 ... 51 3e-06
AT4G24390.1 | Symbols: | RNI-like superfamily protein | chr4:12... 50 4e-06
AT4G24390.2 | Symbols: | RNI-like superfamily protein | chr4:12... 50 4e-06
AT5G51370.2 | Symbols: | RNI-like superfamily protein | chr5:20... 50 5e-06
>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
chr2:10848018-10850275 REVERSE LENGTH=628
Length = 628
Score = 620 bits (1598), Expect = e-177, Method: Compositional matrix adjust.
Identities = 323/583 (55%), Positives = 431/583 (73%), Gaps = 16/583 (2%)
Query: 106 KEETCIETLPDECLFEILRRLPAGQDRGNCMSVSKRWLMLLSNICENEI-CGNKSTGNEN 164
K+ I+ LPDECLFEI RRL Q+R C VSK+WL L+S+I + EI +K T
Sbjct: 59 KKPVSIDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVSSIRQKEIDVPSKIT---- 114
Query: 165 GEQEEGDLEFGNEGFLTRSFEGEKATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDV 224
E+GD EG L+RS +G+KATDVR+AA++VGTA RGGLGKL+IRG NS + V+D+
Sbjct: 115 ---EDGD---DCEGCLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSNSAK-VSDL 167
Query: 225 GLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKN 284
GL++I CPSL L+LW + TI+D GL+EIA C QLEKLEL +C I+ K VAIAK+
Sbjct: 168 GLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKS 227
Query: 285 CPSLTHFSIESCPNIGNGGLQAIGK-CPNLKSVSIKDCAGVGDQGIAGLISSASFVLERV 343
CP+LT ++E+C IG+ GL AI + C LKSVSIK+C V DQGIA L+S+ + L ++
Sbjct: 228 CPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKL 287
Query: 344 VLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHG 403
L+ L V+D++LAV+GHYG+++TDLVL L +VSEKGFWVMGNG GLQKL +L I +C G
Sbjct: 288 KLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQG 347
Query: 404 VTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFG 463
VTD+GL ++GKGCPNMK + K LSDNGLVSFAKA+ S+ESL LEECHR+TQ GFFG
Sbjct: 348 VTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFG 407
Query: 464 LLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCP 523
L NC KLK SL +C I++L LPA C ++ SLSI +CPGFGDA +A +GKLCP
Sbjct: 408 SLLNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPGFGDANLAAIGKLCP 467
Query: 524 QLEHVELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLN 583
QLE ++L GL GIT++GFL L++SS LV +N SGC+ LTD+V+ ++ +G +LEVLN
Sbjct: 468 QLEDIDLCGLKGITESGFLHLIQSS---LVKINFSGCSNLTDRVISAITARNGWTLEVLN 524
Query: 584 LNGCKKISDASLIAIAGSCPLLSDLDVSRCGITDTGIAALAHGKQLNLKVLSLAGCTSVS 643
++GC I+DASL++IA +C +LSDLD+S+C I+D+GI ALA +L L++LS+AGC+ V+
Sbjct: 525 IDGCSNITDASLVSIAANCQILSDLDISKCAISDSGIQALASSDKLKLQILSVAGCSMVT 584
Query: 644 NKGVRALKKLGSSLDGLNIKNCKGISYRSLDMLVQDLWSCDIL 686
+K + A+ LGS+L GLN++ C+ IS ++D LV+ L+ CDIL
Sbjct: 585 DKSLPAIVGLGSTLLGLNLQQCRSISNSTVDFLVERLYKCDIL 627
>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
chr5:8794842-8796882 REVERSE LENGTH=623
Length = 623
Score = 597 bits (1539), Expect = e-170, Method: Compositional matrix adjust.
Identities = 326/624 (52%), Positives = 434/624 (69%), Gaps = 20/624 (3%)
Query: 67 GSLYTLIPRKRISSCPLAYKWRLTFLCRRGLASLSHLVSKEETCIETLPDECLFEILRRL 126
GS+Y L P SCP Y L R S +++T I+ LP+ECLFEILRRL
Sbjct: 17 GSMY-LSP----GSCPGVYYPARKRL-RVAATSFYSGFEEKQTSIDVLPEECLFEILRRL 70
Query: 127 PAGQDRGNCMSVSKRWLMLLSNICENEICGNKSTGNENGEQEEGDLEFGNEGFLTRSFEG 186
P+GQ+R C VSK WL LLS+I +E+ NE+ Q D+E G EGFL+RS EG
Sbjct: 71 PSGQERSACACVSKHWLNLLSSISRSEV-------NESSVQ---DVEEG-EGFLSRSLEG 119
Query: 187 EKATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTLWCIPT 246
+KATD+R+AA++VGT+SRGGLGKL IRG + VTDVGL A+AHGCPSL+I++LW +P
Sbjct: 120 KKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTDVGLGAVAHGCPSLRIVSLWNLPA 179
Query: 247 ISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQA 306
+SD GL EIA C +EKL+L +CP I+ VAIA+NC +L+ +I+SC +GN GL+A
Sbjct: 180 VSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLRA 239
Query: 307 IGK-CPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAV 365
I + C NL+S+SI+ C +GDQG+A L++ A L +V L+ L VS L+LAVIGHYG AV
Sbjct: 240 IARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNVSGLSLAVIGHYGAAV 299
Query: 366 TDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQ 425
TDLVL+ L V+EKGFWVMGN +GL+KL +L ++SC G+TD+GL A+G GCP++K L
Sbjct: 300 TDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLN 359
Query: 426 KCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKN 485
KC +S GLV+ AK+A S+ESL LEECHRI Q G G L NC +KLK SLA+C GI +
Sbjct: 360 KCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNCGSKLKAFSLANCLGISD 419
Query: 486 LN-LRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPL 544
N C S+ SLSI CPGFGDA++A LGK C QL+ VEL GL+G+TDAG L
Sbjct: 420 FNSESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVREL 479
Query: 545 LESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSCPL 604
L+S+ GLV VNLS C ++D V ++ HG +LE LNL+GCK I++ASL+A+A +C
Sbjct: 480 LQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKNITNASLVAVAKNCYS 539
Query: 605 LSDLDVSRCGITDTGIAALAHG-KQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIK 663
++DLD+S ++D GI ALA LNL+VLS+ GC+S+++K ++KLG +L GLNI+
Sbjct: 540 VNDLDISNTLVSDHGIKALASSPNHLNLQVLSIGGCSSITDKSKACIQKLGRTLLGLNIQ 599
Query: 664 NCKGISYRSLDMLVQDLWSCDILF 687
C IS ++D L+++LW CDIL+
Sbjct: 600 RCGRISSSTVDTLLENLWRCDILY 623
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 227/453 (50%), Gaps = 16/453 (3%)
Query: 221 VTDVGLKAIAHGCPSLKILTL-WCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFV 279
+TD GL A+A+G P ++ L+L WC P +S GL +A +C L+ L+L C + +
Sbjct: 127 LTDTGLTALANGFPRIENLSLIWC-PNVSSVGLCSLAQKCTSLKSLDLQGC-YVGDQGLA 184
Query: 280 AIAKNCPSLTHFSIESCPNIGNGGL--QAIGKCPNLKSVSIKDCAGVGDQGIAGLISSAS 337
A+ K C L ++ C + + G+ +G +LKS+ + A + D + + S
Sbjct: 185 AVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEA-VGSHC 243
Query: 338 FVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALG 397
+LE + L+S + D L + + +L L C+ +V++ F +G L L
Sbjct: 244 KLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCV-SVTDVAFAAVGE--LCTSLERLA 300
Query: 398 IVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRIT 457
+ S TD G+ AIGKG +K L C F+S GL + A +E + + CH I
Sbjct: 301 LYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIG 360
Query: 458 QLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAV 517
G + +C +LK L+L C I N L+ C S+E L + DC G GD +
Sbjct: 361 TRGIEAIGKSC-PRLKELALLYCQRIGNSALQEIGK-GCKSLEILHLVDCSGIGDIAMCS 418
Query: 518 LGKLCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGC 577
+ K C L+ + + I + G + + + + L ++L C K+ ++ ++++ K GC
Sbjct: 419 IAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKS-LTELSLRFCDKVGNKALIAIGK--GC 475
Query: 578 SLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRC-GITDTGIAALAHGKQLNLKVLSL 636
SL+ LN++GC +ISDA + AIA CP L+ LD+S I D +A L G + LK L L
Sbjct: 476 SLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPM-LKDLVL 534
Query: 637 AGCTSVSNKGVRALKKLGSSLDGLNIKNCKGIS 669
+ C +++ G+ L + L+ ++ C GI+
Sbjct: 535 SHCHHITDNGLNHLVQKCKLLETCHMVYCPGIT 567
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 154/340 (45%), Gaps = 38/340 (11%)
Query: 190 TDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTLWCIPTISD 249
TDV AA+ S L +LA+ S + TD G++AI G LK LTL +S
Sbjct: 282 TDVAFAAVGELCTS---LERLALY---SFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSC 335
Query: 250 EGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQAIGK 309
+GL IA+ C +LE++E+ C NI + AI K+CP L ++ C IGN LQ IGK
Sbjct: 336 KGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGK 395
Query: 310 -CPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDL 368
C +L+ + + DC+G+GD + + + + + + + + IG + ++T+L
Sbjct: 396 GCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTEL 455
Query: 369 VLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCA 428
L V K +G G LQ+L G C+ ++D G+ AI +GCP + +
Sbjct: 456 SLRFCDKVGNKALIAIGKGCSLQQLNVSG---CNQISDAGITAIARGCPQLTHLDISVLQ 512
Query: 429 FLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNL 488
+ D L + P ++ L L CH IT G L+ C L +C+ +
Sbjct: 513 NIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKL------LETCHMVY---- 562
Query: 489 RLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHV 528
CPG A +A + CP ++ V
Sbjct: 563 ------------------CPGITSAGVATVVSSCPHIKKV 584
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 207 LGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLE 266
L +LA+ C + + + L+ I GC SL+IL L I D + IA C L+KL
Sbjct: 374 LKELALLYC---QRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLH 430
Query: 267 LGQCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQAIGKCPNLKSVSIKDCAGVGD 326
+ +C I K ++I K+C SLT S+ C +GN L AIGK +L+ +++ C + D
Sbjct: 431 IRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISD 490
Query: 327 QGIAGLISSASFV--LERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVM 384
GI + + L+ VL++ + D+ LA +G + DLVL+ ++++ G +
Sbjct: 491 AGITAIARGCPQLTHLDISVLQN--IGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHL 548
Query: 385 GNGRGLQK---LAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQK 426
+QK L +V C G+T G+ + CP++K ++K
Sbjct: 549 -----VQKCKLLETCHMVYCPGITSAGVATVVSSCPHIKKVLIEK 588
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 112/249 (44%), Gaps = 32/249 (12%)
Query: 430 LSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLR 489
L+D GL + A P IE+L L C ++ +G L C + LK L L CY
Sbjct: 127 LTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTS-LKSLDLQGCY-------- 177
Query: 490 LPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSG 549
GD +A +GK C QLE + L G+TD G + L+
Sbjct: 178 --------------------VGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCS 217
Query: 550 AGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSCPLLSDLD 609
L ++ ++ K+TD + L V H LEVL L+ + I D LIA+A C L +L
Sbjct: 218 KSLKSIGVAASAKITD-LSLEAVGSHCKLLEVLYLDS-EYIHDKGLIAVAQGCHRLKNLK 275
Query: 610 VSRCGITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNCKGIS 669
+ +TD AA+ +L+ L+L ++KG+RA+ K L L + +C +S
Sbjct: 276 LQCVSVTDVAFAAVGE-LCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVS 334
Query: 670 YRSLDMLVQ 678
+ L+ +
Sbjct: 335 CKGLEAIAH 343
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 142/352 (40%), Gaps = 82/352 (23%)
Query: 399 VSCHGVTDIGLVAIGKG-----------CPN---------------MKIFQLQKCAFLSD 432
V +TD GL A+ G CPN +K LQ C ++ D
Sbjct: 122 VESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGC-YVGD 180
Query: 433 NGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPA 492
GL + K +E L L C +T +G L+ C+ LK + +A+ I +L+L
Sbjct: 181 QGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVG 240
Query: 493 ----VLPCGSIESLSIHD-------------------CPGFGDATIAVLGKLCPQLEHVE 529
+L ++S IHD C D A +G+LC LE +
Sbjct: 241 SHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLA 300
Query: 530 LNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGC-SLEVLNLNGCK 588
L TD G + + S L ++ LS C ++ + + ++ HGC LE + +NGC
Sbjct: 301 LYSFQHFTDKGMRAIGKGS-KKLKDLTLSDCYFVSCKGLEAIA--HGCKELERVEINGCH 357
Query: 589 KISDASLIAIAGSCPLLSDLDVSRC---------------------------GITDTGIA 621
I + AI SCP L +L + C GI D +
Sbjct: 358 NIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMC 417
Query: 622 ALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNCKGISYRSL 673
++A G + NLK L + C + NKG+ ++ K SL L+++ C + ++L
Sbjct: 418 SIAKGCR-NLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKAL 468
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 217/474 (45%), Gaps = 52/474 (10%)
Query: 191 DVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTL-WCIPTISD 249
D AA+S T GL +L + C S ++DVGL I GC +L ++L WC+ ISD
Sbjct: 136 DREAAALSSAT----GLRELKMDKCLS---LSDVGLARIVVGCSNLNKISLKWCME-ISD 187
Query: 250 EGLIEIANRCHQLEKLELG--QCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQAI 307
G+ + C L+ L++ + N S ++ + K L + SCP I +GGLQ +
Sbjct: 188 LGIDLLCKICKGLKSLDVSYLKITNDSIRSIALLVK----LEVLDMVSCPLIDDGGLQFL 243
Query: 308 GK-CPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVT 366
P+L+ V + C V G+ ++ D+ L H V+
Sbjct: 244 ENGSPSLQEVDVTRCDRVSLSGLISIVRGHP--------------DIQLLKASHCVSEVS 289
Query: 367 DLVLNCLPNVSE-KGFWVMG----------NGRGLQKLAALGIVSCHGVTDIGLVAIGKG 415
L + + K W+ G + L +G+ C VTDIG++++ +
Sbjct: 290 GSFLKYIKGLKHLKTIWIDGAHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISLARN 349
Query: 416 CPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKL-KV 474
C N+K L C F++D + + A++ ++ +L LE CH IT+ G L C + L +
Sbjct: 350 CLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSL--GCYSMLVQE 407
Query: 475 LSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLS 534
L L CYG+ + L + C +++ L + C D I +G C +L ++L +
Sbjct: 408 LDLTDCYGVNDRG--LEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCA 465
Query: 535 GITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDAS 594
G D G L L L + LS C +LTD V + +L L L L G K I+
Sbjct: 466 GFGDDG-LAALSRGCKSLNRLILSYCCELTDTGVEQIRQLE--LLSHLELRGLKNITGVG 522
Query: 595 LIAIAGSCPLLSDLDVSRC-GITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGV 647
L AIA C L LDV C I D+G ALA+ + NL+ ++L C SVS+ +
Sbjct: 523 LAAIASGCKKLGYLDVKLCENIDDSGFWALAYFSK-NLRQINLCNC-SVSDTAL 574
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 203/470 (43%), Gaps = 48/470 (10%)
Query: 234 PSLKILTLWCIPTISDEGLIEIA----NRCHQLEKLELGQCPNISGKAFVAIAKNCPSLT 289
P+L L L P + D+ ++ +A ++ L L + + + +A+ C +L
Sbjct: 65 PNLSSLDLSVCPKLDDDVVLRLALDGAISTLGIKSLNLSRSTAVRARGLETLARMCHALE 124
Query: 290 HFSIESCPNIGNGGLQAIGKCPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESLA 349
+ C G+ A+ L+ + + C + D G+A ++ S + + + +
Sbjct: 125 RVDVSHCWGFGDREAAALSSATGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCME 184
Query: 350 VSDLALAVIGHY--GIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDI 407
+SDL + ++ G+ D+ + N S + + L KL L +VSC + D
Sbjct: 185 ISDLGIDLLCKICKGLKSLDVSYLKITNDSIRSIAL------LVKLEVLDMVSCPLIDDG 238
Query: 408 GLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEEC---------HRITQ 458
GL + G P+++ + +C +S +GL+S + P I+ L C I
Sbjct: 239 GLQFLENGSPSLQEVDVTRCDRVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLKYIKG 298
Query: 459 LGFFGLLFNCAAKLKV---------------LSLASCYGIKNLNLRLPAVLPCGSIESLS 503
L ++ A + + L+ C + ++ + + C ++++L+
Sbjct: 299 LKHLKTIWIDGAHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGM-ISLARNCLNLKTLN 357
Query: 504 IHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKL 563
+ C D I+ + + C L ++L IT+ G L L + ++L+ C +
Sbjct: 358 LACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKG-LQSLGCYSMLVQELDLTDCYGV 416
Query: 564 TDQVVLSLVKLHGCS-LEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRC-GITDTGIA 621
D+ L + CS L+ L L C ISD + I C L +LD+ RC G D G+A
Sbjct: 417 NDR---GLEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLA 473
Query: 622 ALAHG-KQLNLKVLSLAGCTSVSNKGVRALKKLG--SSLDGLNIKNCKGI 668
AL+ G K LN +LS C +++ GV +++L S L+ +KN G+
Sbjct: 474 ALSRGCKSLNRLILSY--CCELTDTGVEQIRQLELLSHLELRGLKNITGV 521
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 163/361 (45%), Gaps = 38/361 (10%)
Query: 312 NLKSVSIKDCAG-VGDQGIAGLISSASFVLERVVLESLA------VSDLALAVIGHYGIA 364
NL+S K A G + L S + ++E + +S++ V+D LAVI
Sbjct: 40 NLQSTDRKKLAARAGPHMLRRLASRFTQIVELDLSQSISRSFYPGVTDSDLAVISEGFKF 99
Query: 365 VTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQL 424
+ L L+ +++ G +G R L L L + C ++D GL A+ +GC +++ L
Sbjct: 100 LRVLNLHNCKGITDTGLASIG--RCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHL 157
Query: 425 QKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIK 484
C F++D L S ++ +E+L L+ C IT G L+ C K+K L + C +
Sbjct: 158 AGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCR-KIKSLDINKCSNVG 216
Query: 485 NLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPL 544
+ + A S+++L + DC G+ +I+ L + C LE + + G I+D + L
Sbjct: 217 DAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLL 276
Query: 545 LESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSCPL 604
+S L N L ++ C ISD+SL I C
Sbjct: 277 ADSCKDSLKN---------------------------LRMDWCLNISDSSLSCILKQCKN 309
Query: 605 LSDLDVSRC-GITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIK 663
L LD+ C +TDT L L LKVL ++ CT ++ G+ L SSL+ ++++
Sbjct: 310 LEALDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKCSSLEYIDVR 369
Query: 664 N 664
+
Sbjct: 370 S 370
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 162/370 (43%), Gaps = 26/370 (7%)
Query: 112 ETLPDECLFEILRRLPAGQDRGNCMSVSKRWLMLLSNICENEICGNKSTGNENGEQEEGD 171
E L D+ L +L RL + +D+ V KRWL L S K G
Sbjct: 8 EALTDDELRWVLSRLDSDKDKEVFGLVCKRWLNLQST-------DRKKLAARAGPHMLRR 60
Query: 172 L--------EFGNEGFLTRSFEGEKATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTD 223
L E ++RSF TD +A +S G L L + C + +TD
Sbjct: 61 LASRFTQIVELDLSQSISRSFY-PGVTDSDLAVISEGFK---FLRVLNLHNC---KGITD 113
Query: 224 VGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAK 283
GL +I L+ L + +SD+GL +A CH L L L C I+ ++ ++++
Sbjct: 114 TGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSE 173
Query: 284 NCPSLTHFSIESCPNIGNGGLQAIGK-CPNLKSVSIKDCAGVGDQGIAGLISSASFVLER 342
C L ++ C NI + GL + K C +KS+ I C+ VGD G++ + + + L+
Sbjct: 174 RCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKT 233
Query: 343 V-VLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSC 401
+ +L+ V + +++ + + + L++ ++S++ ++ + L L + C
Sbjct: 234 LKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADS-CKDSLKNLRMDWC 292
Query: 402 HGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSF-AKAAPSIESLYLEECHRITQLG 460
++D L I K C N++ + C ++D + ++ L + C +IT G
Sbjct: 293 LNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTG 352
Query: 461 FFGLLFNCAA 470
LL C++
Sbjct: 353 IGKLLDKCSS 362
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 6/245 (2%)
Query: 219 RPVTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAF 278
R ++D GL A+A GC L+ L L I+DE L ++ RC LE L L C NI+
Sbjct: 135 RKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGL 194
Query: 279 VAIAKNCPSLTHFSIESCPNIGNGGLQAIGK--CPNLKSVSIKDCAGVGDQGIAGLISSA 336
+ K C + I C N+G+ G+ ++ K +LK++ + DC VG++ I+ L
Sbjct: 195 ADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFC 254
Query: 337 SFVLERVVLESLAVSDLALAVIGHY-GIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAA 395
+ ++ +SD ++ ++ ++ +L ++ N+S+ + + + L A
Sbjct: 255 KNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCI--LKQCKNLEA 312
Query: 396 LGIVSCHGVTDIGLVAIG-KGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECH 454
L I C VTD +G +K+ ++ C ++ G+ S+E + +
Sbjct: 313 LDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKCSSLEYIDVRSLP 372
Query: 455 RITQL 459
+T++
Sbjct: 373 HVTEV 377
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 18/321 (5%)
Query: 221 VTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVA 280
VTD L I+ G L++L L I+D GL I L+ L++ C +S K A
Sbjct: 85 VTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSA 144
Query: 281 IAKNCPSLTHFSIESCPNIGNGGLQAIG-KCPNLKSVSIKDCAGVGDQGIAGLISSASFV 339
+A+ C L + C I + L+++ +C +L+++ ++ C + D G+A L+ +
Sbjct: 145 VAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKI 204
Query: 340 LERVVLESLAVSDLALAVIGHYGI-AVTDLVLNCLPNVSEKGFWVMGN------GRGLQK 392
+SL ++ + +G G+ +V + L + + +GN + +
Sbjct: 205 ------KSLDIN--KCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKN 256
Query: 393 LAALGIVSCHGVTDIGLVAIGKGCPN-MKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLE 451
L L I C ++D ++ + C + +K ++ C +SD+ L K ++E+L +
Sbjct: 257 LETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIG 316
Query: 452 ECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFG 511
C +T F L + LKVL +++C I + + C S+E + + P
Sbjct: 317 CCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIG-KLLDKCSSLEYIDVRSLPHVT 375
Query: 512 DATIAVLGKLCPQLEHVELNG 532
+ + G P+ V +G
Sbjct: 376 EVRCSEAGLEFPKCCKVNFSG 396
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 28/233 (12%)
Query: 473 KVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNG 532
K+ + A + ++ L R ++ +S+S PG D+ +AV+ + L + L+
Sbjct: 48 KLAARAGPHMLRRLASRFTQIVELDLSQSISRSFYPGVTDSDLAVISEGFKFLRVLNLHN 107
Query: 533 LSGITDAGF------LPLLES---------SGAGLVNV----------NLSGCTKLTDQV 567
GITD G L LL+ S GL V +L+GC +TD+
Sbjct: 108 CKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDES 167
Query: 568 VLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRC-GITDTGIAALAHG 626
+ SL + LE L L GC I+D+ L + C + LD+++C + D G++++A
Sbjct: 168 LKSLSE-RCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKA 226
Query: 627 KQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNCKGISYRSLDMLVQD 679
+LK L L C V N+ + +L + +L+ L I C+ IS S+ ML+ D
Sbjct: 227 CASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESI-MLLAD 278
>AT5G01720.1 | Symbols: | RNI-like superfamily protein |
chr5:267118-270391 REVERSE LENGTH=665
Length = 665
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 225/510 (44%), Gaps = 77/510 (15%)
Query: 189 ATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTL-WCIPTI 247
AT++R A +V +R L +L + C + +TD+G+ IA GC L ++L WC+ +
Sbjct: 135 ATEMRDADAAVVAEARS-LERLKLGRC---KMLTDMGIGCIAVGCKKLNTVSLKWCVG-V 189
Query: 248 SDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQAI 307
D G+ +A +C + L+L P I+GK I K L +E C + + L+++
Sbjct: 190 GDLGVGLLAVKCKDIRTLDLSYLP-ITGKCLHDILKL-QHLEELLLEGCFGVDDDSLKSL 247
Query: 308 -GKCPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVT 366
C +LK + C + +G+ L+S A + L+R+ L
Sbjct: 248 RHDCKSLKKLDASSCQNLTHRGLTSLLSGAGY-LQRLDLS-------------------- 286
Query: 367 DLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHG--VTDIGLVAIGKGCPNMKIFQL 424
+C +S + L+K++AL + G VT GL AIG C ++K L
Sbjct: 287 ----HCSSVIS------LDFASSLKKVSALQSIRLDGCSVTPDGLKAIGTLCNSLKEVSL 336
Query: 425 QKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIK 484
KC ++D GL S + L + C +++++ + +C L L + SC +
Sbjct: 337 SKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQIANSCPL-LVSLKMESCSLVS 395
Query: 485 NLNLRLPAVLPCGSIESLSIHD------------------------CPGFGDATIAVLGK 520
L C +E L + D C D ++ +G
Sbjct: 396 REAFWLIGQ-KCRLLEELDLTDNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGM 454
Query: 521 LCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCS-L 579
C L ++L GITD G + + L +N+S C +TD+ SLV L CS L
Sbjct: 455 GCSNLRELDLYRSVGITDVGISTIAQGC-IHLETINISYCQDITDK---SLVSLSKCSLL 510
Query: 580 EVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRC-GITDTGIAALAHGKQLNLKVLSLAG 638
+ GC I+ L AIA C L+ +D+ +C I D G+ ALAH Q NLK ++++
Sbjct: 511 QTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGLLALAHFSQ-NLKQINVSD 569
Query: 639 CTSVSNKGVRALKKLGSSLDGLNIKNCKGI 668
T+V+ G+ +L +G L + + N G+
Sbjct: 570 -TAVTEVGLLSLANIG-CLQNIAVVNSSGL 597
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 191/464 (41%), Gaps = 74/464 (15%)
Query: 221 VTDVGLKAIAHGC---PSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKA 277
VTD L + GC P+L+ L L + S GL+ +A +C L +++L +
Sbjct: 85 VTDYALSVV--GCLSGPTLRSLDLSRSGSFSAAGLLRLALKCVNLVEIDLSNATEMRDAD 142
Query: 278 FVAIAKNCPSLTHFSIESCPNIGNGGLQAIG-KCPNLKSVSIKDCAGVGDQGIAGLISSA 336
+A+ SL + C + + G+ I C L +VS+K C GVGD G+ GL++
Sbjct: 143 AAVVAEA-RSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGVGDLGV-GLLA-- 198
Query: 337 SFVLERVVLESLAVSDLA-LAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAA 395
V + + DL+ L + G CL ++ + G
Sbjct: 199 ------VKCKDIRTLDLSYLPITG-----------KCLHDILKLQHLEELLLEG------ 235
Query: 396 LGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHR 455
C GV D L ++ C ++K C L+ GL S A ++ L L C
Sbjct: 236 -----CFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSS 290
Query: 456 ITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATI 515
+ L F A+ LK +S +++S+ + C D
Sbjct: 291 VISLDF-------ASSLKKVS---------------------ALQSIRLDGCSVTPDGLK 322
Query: 516 AVLGKLCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLH 575
A+ G LC L+ V L+ +TD G L+ L ++++ C KL+ + + +
Sbjct: 323 AI-GTLCNSLKEVSLSKCVSVTDEGLSSLVMKL-KDLRKLDITCCRKLSRVSITQIA--N 378
Query: 576 GCSLEV-LNLNGCKKISDASLIAIAGSCPLLSDLDVSRCGITDTGIAALAHGKQLNLKVL 634
C L V L + C +S + I C LL +LD++ I D G+ +++ L+ L
Sbjct: 379 SCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLKSISSCLSLSSLKL 438
Query: 635 SLAGCTSVSNKGVRALKKLGSSLDGLNIKNCKGISYRSLDMLVQ 678
+ C ++++KG+ + S+L L++ GI+ + + Q
Sbjct: 439 GI--CLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQ 480
>AT4G33210.1 | Symbols: SLOMO | F-box family protein |
chr4:16015971-16020697 REVERSE LENGTH=990
Length = 990
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 183/439 (41%), Gaps = 96/439 (21%)
Query: 223 DVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIA 282
D +++ A CP L+ L + +SDE L EIA C L L CPNIS ++
Sbjct: 384 DAAIRSAAISCPQLESLDVSNCSCVSDETLREIAQACANLHILNASYCPNISLESV---- 439
Query: 283 KNCPSLTHFSIESCPNIGNGGLQAIGKCPNLKSVSIKDCAGVGDQGIAGLISSASFVLER 342
+ P LT + SC I + + I P L+ + + +C L+++ S L R
Sbjct: 440 -HLPMLTVLKLHSCEGITSASMTWIANSPALEVLELDNC---------NLLTTVSLHLSR 489
Query: 343 VVLESLA----VSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGR-GLQKLAALG 397
+ SL +DL L I I V+ NC P + R LQK L
Sbjct: 490 LQSISLVHCRKFTDLNLQSIMLSSITVS----NC-PALRRITITSNALRRLALQKQENLT 544
Query: 398 --IVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHR 455
++ CH + ++ L C ++ C SD+G P ++SL L+ C
Sbjct: 545 TLVLQCHSLQEVDL----SDCESLSN---SVCKIFSDDG------GCPMLKSLILDNCES 591
Query: 456 ITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATI 515
+T + F C + L LSL C + +L L+
Sbjct: 592 LTAVRF------CNSSLASLSLVGCRAVTSLELK-------------------------- 619
Query: 516 AVLGKLCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLH 575
CP++E + L+G + A F P+ L ++NL C KL+ VL++ +
Sbjct: 620 ------CPRIEQICLDGCDHLETAFFQPV------ALRSLNLGICPKLS---VLNIEAPY 664
Query: 576 GCSLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRCG-ITDTGIAALAHGKQLNLKVL 634
SLE L GC +S+AS++ CPLL+ LD S C + D ++A L ++ L
Sbjct: 665 MVSLE---LKGCGVLSEASIM-----CPLLTSLDASFCSQLRDDCLSATTASCPL-IESL 715
Query: 635 SLAGCTSVSNKGVRALKKL 653
L C S+ + G+ +L L
Sbjct: 716 VLMSCPSIGSDGLSSLNGL 734
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 40/301 (13%)
Query: 374 PNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQ-LQKCAFLSD 432
PN +E + G + AL + + + ++ ++ IGKG + FQ L +C L
Sbjct: 256 PNATEVNVY------GAPAVNALAMKAATTLRNLEVLTIGKGHISESFFQALGECNMLR- 308
Query: 433 NGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLA-SCYGIKNLNLRLP 491
+ VS A + ++L R+ +L K +V+ L+ C +++L+L+
Sbjct: 309 SVTVSDAILGNGAQEIHLSH-DRLRELKI--------TKCRVMRLSIRCPQLRSLSLKRS 359
Query: 492 ----AVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLES 547
A+L C ++ L I C DA I CPQLE ++++ S ++D + ++
Sbjct: 360 NMSQAMLNCPLLQLLDIASCHKLLDAAIRSAAISCPQLESLDVSNCSCVSDETLREIAQA 419
Query: 548 SGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSCPLLSD 607
A L +N S C +SL +H L VL L+ C+ I+ AS+ IA S P L
Sbjct: 420 C-ANLHILNASYCPN------ISLESVHLPMLTVLKLHSCEGITSASMTWIANS-PALEV 471
Query: 608 LDVSRCGITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNCKG 667
L++ C + T L+ L+ +SL C ++ ++++ L + + NC
Sbjct: 472 LELDNCNLLTTVSLHLSR-----LQSISLVHCRKFTDLNLQSIM-----LSSITVSNCPA 521
Query: 668 I 668
+
Sbjct: 522 L 522
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 178/497 (35%), Gaps = 127/497 (25%)
Query: 219 RPVTDVGLKAI------AHGCPSLKILTLWC-----IPTISDEGLIEIANRCHQLEKLEL 267
R TD+ L++I CP+L+ +T+ + E L + +CH L++++L
Sbjct: 499 RKFTDLNLQSIMLSSITVSNCPALRRITITSNALRRLALQKQENLTTLVLQCHSLQEVDL 558
Query: 268 GQCPNISG--------------------------------------------KAFVAIAK 283
C ++S +A ++
Sbjct: 559 SDCESLSNSVCKIFSDDGGCPMLKSLILDNCESLTAVRFCNSSLASLSLVGCRAVTSLEL 618
Query: 284 NCPSLTHFSIESCPNIGNGGLQAI-------GKCPNLKSVSIKDCAGVG-DQGIAGLISS 335
CP + ++ C ++ Q + G CP L ++I+ V + G++S
Sbjct: 619 KCPRIEQICLDGCDHLETAFFQPVALRSLNLGICPKLSVLNIEAPYMVSLELKGCGVLSE 678
Query: 336 ASFVLERVVLESLAVS------DLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRG 389
AS + +L SL S D L+ + LVL P++ G
Sbjct: 679 ASIMCP--LLTSLDASFCSQLRDDCLSATTASCPLIESLVLMSCPSIGSDGL------SS 730
Query: 390 LQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAK--AAPSIES 447
L L L ++ + L + K C +K+ +LQ C +L+D+ L K A P++E
Sbjct: 731 LNGLPNLTVLDLSYTFLMNLEPVFKSCIQLKVLKLQACKYLTDSSLEPLYKEGALPALEE 790
Query: 448 LYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNL--------------------N 487
L L + Q LL C L LSL C + +L N
Sbjct: 791 LDLSY-GTLCQTAIDDLL-ACCTHLTHLSLNGCVNMHDLDWGSTSVHLFDYFGVYSSSDN 848
Query: 488 LRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLES 547
+ PA +++L+ CP I P L+ L ++ + L ++
Sbjct: 849 TQEPAETANRLLQNLNCVGCPNIRKVLIP------PAARFYHLSTL-NLSLSVNLKEVDL 901
Query: 548 SGAGLVNVNLS----------GCTKLTDQVVLSL--------VKLHGCS-LEVLNLNGCK 588
+ + LV +NLS GC +L + S + GCS LE L+L C
Sbjct: 902 TCSNLVLLNLSNCCSLEVLKLGCPRLASLFLQSCNMDEAGVEAAISGCSSLETLDLRFCP 961
Query: 589 KISDASLIAIAGSCPLL 605
KIS S+ CP L
Sbjct: 962 KISSVSMSKFRTVCPSL 978
>AT3G58530.1 | Symbols: | RNI-like superfamily protein |
chr3:21645759-21648219 FORWARD LENGTH=353
Length = 353
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 11/257 (4%)
Query: 402 HGVTDIGLVAIGKGCPN----MKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRIT 457
GV D L + CP+ ++ L C +SDNG+ + P ++ + R+T
Sbjct: 92 QGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVT 151
Query: 458 QLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAV 517
G L+ NC + L+L+ C + + +++L A +ESL+I C D +
Sbjct: 152 DAGIRNLVKNCR-HITDLNLSGCKSLTDKSMQLVAE-SYPDLESLNITRCVKITDDGLLQ 209
Query: 518 LGKLCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGC 577
+ + C L+ + L LSG TD ++ + S A L +++ G ++D+ + + K +
Sbjct: 210 VLQKCFSLQTLNLYALSGFTDKAYMKI--SLLADLRFLDICGAQNISDEGIGHIAKCN-- 265
Query: 578 SLEVLNLNGCKKISDASLIAIAGSCPLLSDLDV-SRCGITDTGIAALAHGKQLNLKVLSL 636
LE LNL C +I+DA + IA SC L L + G+TD + L+ L L +
Sbjct: 266 KLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLETLSQTCSTTLTTLDV 325
Query: 637 AGCTSVSNKGVRALKKL 653
GCT + + L ++
Sbjct: 326 NGCTGIKRRSREELLQM 342
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 199 VGTASRGGLGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANR 258
V T L L N + ++D G++AI CP LK+ +++ ++D G+ +
Sbjct: 102 VKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKN 161
Query: 259 CHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGG-LQAIGKCPNLKSVS 317
C + L L C +++ K+ +A++ P L +I C I + G LQ + KC +L++++
Sbjct: 162 CRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVLQKCFSLQTLN 221
Query: 318 IKDCAGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVS 377
+ +G D+ + +L L D+ A N+S
Sbjct: 222 LYALSGFTDKAYMKI----------SLLADLRFLDICGA-----------------QNIS 254
Query: 378 EKGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVS 437
++G +G+ KL +L + C +TD G+ I C +++ L ++D L +
Sbjct: 255 DEG---IGHIAKCNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLET 311
Query: 438 FAKA 441
++
Sbjct: 312 LSQT 315
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 24/193 (12%)
Query: 392 KLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLE 451
KL I VTD G+ + K C ++ L C L+D + A++ P +ESL +
Sbjct: 138 KLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNIT 197
Query: 452 ECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKN---LNLRLPA---------------- 492
C +IT G +L C + L+ L+L + G + + + L A
Sbjct: 198 RCVKITDDGLLQVLQKCFS-LQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDE 256
Query: 493 ----VLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESS 548
+ C +ESL++ C DA + + C LE + L G+ G+TD L ++
Sbjct: 257 GIGHIAKCNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLETLSQTC 316
Query: 549 GAGLVNVNLSGCT 561
L ++++GCT
Sbjct: 317 STTLTTLDVNGCT 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 108/269 (40%), Gaps = 35/269 (13%)
Query: 221 VTDVGLKAIAHGCP----SLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGK 276
V D LK + CP SL+ L L ISD G+ I + C +L+ + ++
Sbjct: 94 VVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDA 153
Query: 277 AFVAIAKNCPSLTHFSIESCPNIGNGGLQAIGKC-PNLKSVSIKDCAGVGDQGIAGLISS 335
+ KNC +T ++ C ++ + +Q + + P+L+S++I C + D G+ ++
Sbjct: 154 GIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVLQK 213
Query: 336 ASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAA 395
+L + Y L ++K + + L L
Sbjct: 214 C----------------FSLQTLNLYA----------LSGFTDKAYMKIS---LLADLRF 244
Query: 396 LGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHR 455
L I ++D G+ I K C ++ L C ++D G+ + A + S+E L L
Sbjct: 245 LDICGAQNISDEGIGHIAK-CNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVG 303
Query: 456 ITQLGFFGLLFNCAAKLKVLSLASCYGIK 484
+T L C+ L L + C GIK
Sbjct: 304 VTDRCLETLSQTCSTTLTTLDVNGCTGIK 332
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 31/173 (17%)
Query: 498 SIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNVNL 557
S+E L+++ C D I + +CP+L+ + +TDAG L++
Sbjct: 112 SLEWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVK----------- 160
Query: 558 SGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRC-GIT 616
C +TD LNL+GCK ++D S+ +A S P L L+++RC IT
Sbjct: 161 -NCRHITD----------------LNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKIT 203
Query: 617 DTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNCKGIS 669
D G+ + K +L+ L+L + ++K + L L L+I + IS
Sbjct: 204 DDGLLQVLQ-KCFSLQTLNLYALSGFTDKAYMKISLLA-DLRFLDICGAQNIS 254
>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
chr1:7497479-7499386 FORWARD LENGTH=360
Length = 360
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 505 HDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLT 564
D P D + + C +L+ ++L+ ITD L L +NLSGCT +
Sbjct: 99 QDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGC-PDLTKLNLSGCTSFS 157
Query: 565 DQVVLSLVKLHGC-SLEVLNLNGC-KKISDASLIAIAGSCPLLSDLDVSRC-GITDTGIA 621
D + L + C L+VLNL GC K ++D +L AI +C + L++ C I+D G+
Sbjct: 158 DTAIAYLTRF--CRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVM 215
Query: 622 ALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNCKGISYRSLDMLVQ 678
+LA+G +L+ L L GC ++++ V AL L L + C+ I+ R++ L Q
Sbjct: 216 SLAYGCP-DLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQ 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Query: 288 LTHFSIESCPNIGNG-GLQAIGKCPNLKSVSIK-DCAGVGDQGIAGLISSASFVLERVVL 345
LT + C N N L + K L++++++ D + D + + + + E +
Sbjct: 66 LTRLRLSWCNNNMNSLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLS 125
Query: 346 ESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSC-HGV 404
+SL ++D +L + H +T L L+ + S+ + R +KL L + C V
Sbjct: 126 KSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLT--RFCRKLKVLNLCGCVKAV 183
Query: 405 TDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGL 464
TD L AIG C M+ L C +SD+G++S A P + +L L C IT L
Sbjct: 184 TDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVAL 243
Query: 465 LFNCAAKLKVLSLASCYGIKN 485
C L+ L L C I +
Sbjct: 244 ADWC-VHLRSLGLYYCRNITD 263
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 19/228 (8%)
Query: 209 KLAIRGCNSDRP-VTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLEL 267
KL D+P + D ++AIA+ C L+ L L I+D L +A+ C L KL L
Sbjct: 91 KLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNL 150
Query: 268 GQCPNISGKAFVAIAKNCPSLTHFSIESCPN-IGNGGLQAIG-KCPNLKSVSIKDCAGVG 325
C + S A + + C L ++ C + + L+AIG C ++S+++ C +
Sbjct: 151 SGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENIS 210
Query: 326 DQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVM- 384
D G+ L + + + ++D ++ + + + + L L N++++ + +
Sbjct: 211 DDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLA 270
Query: 385 --------GNGRGLQK-------LAALGIVSCHGVTDIGLVAIGKGCP 417
G+ + ++K L +L I C +T + A+ P
Sbjct: 271 QSGVKNKPGSWKSVKKGKYDEEGLRSLNISQCTALTPSAVQAVCDSFP 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 84/223 (37%), Gaps = 23/223 (10%)
Query: 391 QKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYL 450
+L L + +TD L A+ GCP++ L C SD + + ++ L L
Sbjct: 117 HELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNL 176
Query: 451 EECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGF 510
C + + N +++ L+L C I + + + C + +L + C
Sbjct: 177 CGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGV-MSLAYGCPDLRTLDLCGCVLI 235
Query: 511 GDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLES-----------------SGAGLV 553
D ++ L C L + L ITD L +S GL
Sbjct: 236 TDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLR 295
Query: 554 NVNLSGCTKLTDQVVL----SLVKLHGCS-LEVLNLNGCKKIS 591
++N+S CT LT V S LH CS L ++GC ++
Sbjct: 296 SLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLVMSGCLNLT 338
>AT2G06040.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-rich
repeat, cysteine-containing subtype
(InterPro:IPR006553); BEST Arabidopsis thaliana protein
match is: RNI-like superfamily protein
(TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins
in 240 species: Archae - 0; Bacteria - 125; Metazoa -
2326; Fungi - 765; Plants - 1373; Viruses - 0; Other
Eukaryotes - 439 (source: NCBI BLink). |
chr2:2352333-2355419 REVERSE LENGTH=762
Length = 762
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 131/286 (45%), Gaps = 13/286 (4%)
Query: 381 FWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAK 440
F + + + L L+ L I ++D+GL + P + L +C+ L+ + + +
Sbjct: 473 FTLARSPKVLPMLSTLSISGACRLSDVGLRQLVSSAPAITSINLNQCSLLTSSSIDMLSD 532
Query: 441 AAPSI-ESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSI 499
+ S+ LY+ EC I L KL+VLSLA +K L+ ++
Sbjct: 533 SLGSVLRELYINECQNIDMKHILAALKKFE-KLEVLSLADLPSVKGRFLKEFVTARGQTL 591
Query: 500 ESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDA--GFLPLLESSGAGLVNVNL 557
+ L + + D++I V+ + CP L ++L + +TD+ G+L ++G + +
Sbjct: 592 KQLILTNSRKLSDSSIKVISENCPNLSVLDLANVCKLTDSSLGYL----ANGCQALEKLI 647
Query: 558 SGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRCGITD 617
+D+ V + V+ G SL+ L+LN KK+ + +A+A L LD+S C
Sbjct: 648 FCRNPFSDEAVAAFVETAGGSLKELSLNNVKKVGHNTALALAKHSDKLQILDISWCREMS 707
Query: 618 TGIAALAHGKQLNLKVLSLAGCTSVSNKGVRA-----LKKLGSSLD 658
+ +LKVL + GC+ V++ V+ +K LG +D
Sbjct: 708 NDLLGYIVDNSSSLKVLKVFGCSQVTDVFVKGHSNPNVKILGVKMD 753
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 414 KGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLK 473
K P + + LSD GL +AP+I S+ L +C +T L + + L+
Sbjct: 480 KVLPMLSTLSISGACRLSDVGLRQLVSSAPAITSINLNQCSLLTSSSIDMLSDSLGSVLR 539
Query: 474 VLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGL 533
L + C I ++ L A+ +E LS+ D P +V G+ +
Sbjct: 540 ELYINECQNI-DMKHILAALKKFEKLEVLSLADLP-------SVKGRFLKEF-------- 583
Query: 534 SGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDA 593
+ + G L + L+ KL+D + ++ + +L VL+L K++D+
Sbjct: 584 -----------VTARGQTLKQLILTNSRKLSDSSI-KVISENCPNLSVLDLANVCKLTDS 631
Query: 594 SLIAIAGSCPLLSDLDVSRCGITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKL 653
SL +A C L L R +D +AA +LK LSL V + AL K
Sbjct: 632 SLGYLANGCQALEKLIFCRNPFSDEAVAAFVETAGGSLKELSLNNVKKVGHNTALALAKH 691
Query: 654 GSSLDGLNIKNCKGISYRSLDMLVQDLWSCDIL 686
L L+I C+ +S L +V + S +L
Sbjct: 692 SDKLQILDISWCREMSNDLLGYIVDNSSSLKVL 724
>AT1G80570.1 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 213/542 (39%), Gaps = 95/542 (17%)
Query: 111 IETLPDECLFEILRRLPAGQDRGNCMSVS-KRWLMLLSNICENEICGNKSTGNENGEQEE 169
++ LPD +++IL +L DR N +S+S KR+ L +NE + G +
Sbjct: 1 MDELPDHLVWDILSKLHTTDDR-NSLSLSCKRFFSL-----DNEQRYSLRIGCGLVPASD 54
Query: 170 GDLEFGNEGFLTRSFEGEKATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAI 229
L L R F ++ + G + KL + V D GL +
Sbjct: 55 ALLS------LCRRFPNLSKVEIIYS---------GWMSKLG-------KQVDDQGLLVL 92
Query: 230 AHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLT 289
C SL LTL I+D G+ +++ C +L L+L P I+G +++A C L
Sbjct: 93 TTNCHSLTDLTLSFCTFITDVGIGHLSS-CPELSSLKLNFAPRITGCGVLSLAVGCKKLR 151
Query: 290 HFSIESCPNIGN-GGLQAIGKCPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESL 348
+ C N+ + L+ GK L+ + IK+C +G+ + L +S
Sbjct: 152 RLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLIKLRNSWR----------- 200
Query: 349 AVSDLALAVIGHYG-IAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDI 407
++ L V +Y + V D + + W L L + +C
Sbjct: 201 KLTSLQFEVDANYRYMKVYDQL--------DVERWP-KQLVPCDSLVELSLGNCIIAPGR 251
Query: 408 GLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFN 467
GL + + C N++ L C +SD+ +++ + A + S+ L R+ LL N
Sbjct: 252 GLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLRSISL----RVPSDFTLPLLNN 307
Query: 468 CAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEH 527
+L SL++ C +ES I F D P L
Sbjct: 308 ITLRLTDESLSA------------IAQHCSKLESFKI----SFSDGEF-------PSLFS 344
Query: 528 VELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGC 587
L G+ IT P+ E S + N G L LE+L L C
Sbjct: 345 FTLQGI--ITLIQKCPVRELSLDHVCVFNDMGMEALCS----------AQKLEILELVHC 392
Query: 588 KKISDASLIAIAGSCPLLSDLDVSRC-GITDTGIAALAHGKQLNLKVLSLAGCTSVSNKG 646
+++SD LI ++ P L+ L +S+C G+TD G+ L +L L L + C VS +G
Sbjct: 393 QEVSDEGLILVS-QFPSLNVLKLSKCLGVTDDGMRPLVGSHKLEL--LVVEDCPQVSRRG 449
Query: 647 VR 648
V
Sbjct: 450 VH 451
>AT1G80570.3 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 213/542 (39%), Gaps = 95/542 (17%)
Query: 111 IETLPDECLFEILRRLPAGQDRGNCMSVS-KRWLMLLSNICENEICGNKSTGNENGEQEE 169
++ LPD +++IL +L DR N +S+S KR+ L +NE + G +
Sbjct: 1 MDELPDHLVWDILSKLHTTDDR-NSLSLSCKRFFSL-----DNEQRYSLRIGCGLVPASD 54
Query: 170 GDLEFGNEGFLTRSFEGEKATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAI 229
L L R F ++ + G + KL + V D GL +
Sbjct: 55 ALLS------LCRRFPNLSKVEIIYS---------GWMSKLG-------KQVDDQGLLVL 92
Query: 230 AHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLT 289
C SL LTL I+D G+ +++ C +L L+L P I+G +++A C L
Sbjct: 93 TTNCHSLTDLTLSFCTFITDVGIGHLSS-CPELSSLKLNFAPRITGCGVLSLAVGCKKLR 151
Query: 290 HFSIESCPNIGN-GGLQAIGKCPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESL 348
+ C N+ + L+ GK L+ + IK+C +G+ + L +S
Sbjct: 152 RLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLIKLRNSWR----------- 200
Query: 349 AVSDLALAVIGHYG-IAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDI 407
++ L V +Y + V D + + W L L + +C
Sbjct: 201 KLTSLQFEVDANYRYMKVYDQL--------DVERWP-KQLVPCDSLVELSLGNCIIAPGR 251
Query: 408 GLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFN 467
GL + + C N++ L C +SD+ +++ + A + S+ L R+ LL N
Sbjct: 252 GLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLRSISL----RVPSDFTLPLLNN 307
Query: 468 CAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEH 527
+L SL++ C +ES I F D P L
Sbjct: 308 ITLRLTDESLSA------------IAQHCSKLESFKI----SFSDGEF-------PSLFS 344
Query: 528 VELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGC 587
L G+ IT P+ E S + N G L LE+L L C
Sbjct: 345 FTLQGI--ITLIQKCPVRELSLDHVCVFNDMGMEALCS----------AQKLEILELVHC 392
Query: 588 KKISDASLIAIAGSCPLLSDLDVSRC-GITDTGIAALAHGKQLNLKVLSLAGCTSVSNKG 646
+++SD LI ++ P L+ L +S+C G+TD G+ L +L L L + C VS +G
Sbjct: 393 QEVSDEGLILVS-QFPSLNVLKLSKCLGVTDDGMRPLVGSHKLEL--LVVEDCPQVSRRG 449
Query: 647 VR 648
V
Sbjct: 450 VH 451
>AT1G80570.2 | Symbols: | RNI-like superfamily protein |
chr1:30290661-30292231 FORWARD LENGTH=480
Length = 480
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 213/542 (39%), Gaps = 95/542 (17%)
Query: 111 IETLPDECLFEILRRLPAGQDRGNCMSVS-KRWLMLLSNICENEICGNKSTGNENGEQEE 169
++ LPD +++IL +L DR N +S+S KR+ L +NE + G +
Sbjct: 14 MDELPDHLVWDILSKLHTTDDR-NSLSLSCKRFFSL-----DNEQRYSLRIGCGLVPASD 67
Query: 170 GDLEFGNEGFLTRSFEGEKATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAI 229
L L R F ++ + G + KL + V D GL +
Sbjct: 68 ALLS------LCRRFPNLSKVEIIYS---------GWMSKLG-------KQVDDQGLLVL 105
Query: 230 AHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLT 289
C SL LTL I+D G+ +++ C +L L+L P I+G +++A C L
Sbjct: 106 TTNCHSLTDLTLSFCTFITDVGIGHLSS-CPELSSLKLNFAPRITGCGVLSLAVGCKKLR 164
Query: 290 HFSIESCPNIGN-GGLQAIGKCPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESL 348
+ C N+ + L+ GK L+ + IK+C +G+ + L +S
Sbjct: 165 RLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLIKLRNSWR----------- 213
Query: 349 AVSDLALAVIGHYG-IAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDI 407
++ L V +Y + V D + + W L L + +C
Sbjct: 214 KLTSLQFEVDANYRYMKVYDQL--------DVERWP-KQLVPCDSLVELSLGNCIIAPGR 264
Query: 408 GLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFN 467
GL + + C N++ L C +SD+ +++ + A + S+ L R+ LL N
Sbjct: 265 GLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLRSISL----RVPSDFTLPLLNN 320
Query: 468 CAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEH 527
+L SL++ C +ES I F D P L
Sbjct: 321 ITLRLTDESLSA------------IAQHCSKLESFKI----SFSDGEF-------PSLFS 357
Query: 528 VELNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGC 587
L G+ IT P+ E S + N G L LE+L L C
Sbjct: 358 FTLQGI--ITLIQKCPVRELSLDHVCVFNDMGMEALCS----------AQKLEILELVHC 405
Query: 588 KKISDASLIAIAGSCPLLSDLDVSRC-GITDTGIAALAHGKQLNLKVLSLAGCTSVSNKG 646
+++SD LI ++ P L+ L +S+C G+TD G+ L +L L L + C VS +G
Sbjct: 406 QEVSDEGLILVS-QFPSLNVLKLSKCLGVTDDGMRPLVGSHKLEL--LVVEDCPQVSRRG 462
Query: 647 VR 648
V
Sbjct: 463 VH 464
>AT1G55590.1 | Symbols: | RNI-like superfamily protein |
chr1:20769476-20771756 REVERSE LENGTH=607
Length = 607
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 4/225 (1%)
Query: 217 SDRPVTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGK 276
S + + D+G+ ++ C L+ + L P +SD G + + C L+K E+ +S
Sbjct: 294 SFKRINDMGIFLLSEACKGLESVRLGGFPKVSDAGFASLLHSCRNLKKFEVRGAFLLSDL 353
Query: 277 AFVAIAKNCPSLTHFSIESCPNIGNGGLQAIGKCPNLKSVSIKDCAGVGDQGIAGLISSA 336
AF + + SL + +CP I + ++ +G C NL+ + + C + D + + SA
Sbjct: 354 AFHDVTGSSCSLQEVRLSTCPLITSEAVKKLGLCGNLEVLDLGSCKSISDSCLNSV--SA 411
Query: 337 SFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGL--QKLA 394
L + L V+D + +G + +T L L VS++G + N G + L+
Sbjct: 412 LRKLTSLNLAGADVTDSGMLALGKSDVPITQLSLRGCRRVSDRGISYLLNNEGTISKTLS 471
Query: 395 ALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFA 439
L + G++D + I C + ++ C ++D+ + S A
Sbjct: 472 TLDLGHMPGISDRAIHTITHCCKALTELSIRSCFHVTDSSIESLA 516
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 193/467 (41%), Gaps = 64/467 (13%)
Query: 226 LKAIAHGCPSLKILTLWCI----PTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAI 281
L I CP+L++LTL P + L ++ N C LE L+L NI G A
Sbjct: 108 LTYIGTLCPNLRVLTLEMADLDSPDVFQSNLTQMLNGCPYLESLQL----NIRGILVDAT 163
Query: 282 AKNCPSLTHFSIESCPNIGNGGLQAIGKCPNLKSVSI---------KDCAGVGDQGIAGL 332
A FS+ L+A+ P L+S +I D A L
Sbjct: 164 AFQS---VRFSLPET-------LKALRLQPLLESEAILLMNRFKVTGTYLSQPDYNSALL 213
Query: 333 ISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLP--------NVSEKGFWVM 384
S SF L+ + L +SD + I + L L P +++ G +
Sbjct: 214 SPSPSFTLQSLSLVLDLISDRLIIAITGSLPQLVKLDLEDRPEKEPFPDNDLTYTGLQAL 273
Query: 385 GNGRGLQKLAALGI-----VSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFA 439
G + L L+ + +S + D+G+ + + C ++ +L +SD G S
Sbjct: 274 GFCQQLTSLSLVRTCYNRKISFKRINDMGIFLLSEACKGLESVRLGGFPKVSDAGFASLL 333
Query: 440 KAAPSIESLYLEECHRITQLGFFGLL-FNCA---AKLKVLSLASCYGIKNLNLRLPAVLP 495
+ +++ + ++ L F + +C+ +L L + +K L L
Sbjct: 334 HSCRNLKKFEVRGAFLLSDLAFHDVTGSSCSLQEVRLSTCPLITSEAVKKLGL------- 386
Query: 496 CGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNV 555
CG++E L + C D+ + + L +L + L G + +TD+G L L S + +
Sbjct: 387 CGNLEVLDLGSCKSISDSCLNSVSAL-RKLTSLNLAG-ADVTDSGMLA-LGKSDVPITQL 443
Query: 556 NLSGCTKLTDQVVLSLVKLHGC---SLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSR 612
+L GC +++D+ + L+ G +L L+L ISD ++ I C L++L +
Sbjct: 444 SLRGCRRVSDRGISYLLNNEGTISKTLSTLDLGHMPGISDRAIHTITHCCKALTELSIRS 503
Query: 613 C-GITDTGIAAL------AHGKQLNLKVLSLAGCTSVSNKGVRALKK 652
C +TD+ I +L A G L+ L++ C S++ +R L K
Sbjct: 504 CFHVTDSSIESLATWERQAEGGSKQLRKLNVHNCVSLTTGALRWLSK 550
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 35/199 (17%)
Query: 510 FGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLES---------------------- 547
D I +L + C LE V L G ++DAGF LL S
Sbjct: 298 INDMGIFLLSEACKGLESVRLGGFPKVSDAGFASLLHSCRNLKKFEVRGAFLLSDLAFHD 357
Query: 548 ---SGAGLVNVNLSGCTKLTDQVVLSLVKLHGC-SLEVLNLNGCKKISDASLIAIAGSCP 603
S L V LS C +T + V KL C +LEVL+L CK ISD+ L +++ +
Sbjct: 358 VTGSSCSLQEVRLSTCPLITSEAV---KKLGLCGNLEVLDLGSCKSISDSCLNSVS-ALR 413
Query: 604 LLSDLDVSRCGITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRAL----KKLGSSLDG 659
L+ L+++ +TD+G+ AL + + LSL GC VS++G+ L + +L
Sbjct: 414 KLTSLNLAGADVTDSGMLALGKS-DVPITQLSLRGCRRVSDRGISYLLNNEGTISKTLST 472
Query: 660 LNIKNCKGISYRSLDMLVQ 678
L++ + GIS R++ +
Sbjct: 473 LDLGHMPGISDRAIHTITH 491
>AT3G07550.2 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 552 LVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVS 611
L +++LSGCT L D + SL + G L L L+ C ISD + IA CP LS + +
Sbjct: 93 LEHLSLSGCTVLNDSSLDSL-RYPGARLHTLYLDCCFGISDDGISTIASFCPNLSVVSLY 151
Query: 612 RCGITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNCKGIS 669
RC I+D G+ LA L+LK ++L+ C VS+ G++AL + L+ + I NCK I+
Sbjct: 152 RCNISDIGLETLARAS-LSLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSIT 208
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 26/255 (10%)
Query: 419 MKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLA 478
++ L C L+D+ L S + +LYL+ C I+ G + C L V+SL
Sbjct: 93 LEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASFCP-NLSVVSLY 151
Query: 479 SCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITD 538
C I ++ L A S++ +++ CP D I L + C QLE V+++ IT
Sbjct: 152 RC-NISDIGLETLARASL-SLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSITG 209
Query: 539 AGFL---PLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCS----------------- 578
GF P L A + G T + + + + G S
Sbjct: 210 VGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIAS 269
Query: 579 -LEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRCG-ITDTGIAALAHGKQLNLKVLSL 636
L +LNL C+ + D S+ AIA CPLL + +++ C + +G A+ + NLK L +
Sbjct: 270 KLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCR-NLKKLHV 328
Query: 637 AGCTSVSNKGVRALK 651
C ++ ++G+ AL+
Sbjct: 329 NRCRNLCDQGLLALR 343
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 128/276 (46%), Gaps = 42/276 (15%)
Query: 349 AVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIG 408
++D +L + + G + L L+C +S+ G + + L+ + + C+ ++DIG
Sbjct: 103 VLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASF--CPNLSVVSLYRCN-ISDIG 159
Query: 409 LVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNC 468
L + + ++K L C +SD G+ + ++A +ES+ + C IT +GF G C
Sbjct: 160 LETLARASLSLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSITGVGFSG----C 215
Query: 469 AAKLKVLSLASCY-------------GIKNLN-------LRLPAVLPCGS-----IESLS 503
+ L + SC GI+ LN +R ++P GS + L+
Sbjct: 216 SPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIASKLRILN 275
Query: 504 IHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSGA---GLVNVNLSGC 560
+ C GD +I + K CP L+ L + +G+ E+ G L ++++ C
Sbjct: 276 LRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGW----EAVGKWCRNLKKLHVNRC 331
Query: 561 TKLTDQVVLSLVKLHGC-SLEVLNLNGCKKISDASL 595
L DQ +L+L GC +L++L +NG +++ ++
Sbjct: 332 RNLCDQGLLALRC--GCMNLQILYMNGNARLTPTAI 365
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 144/393 (36%), Gaps = 98/393 (24%)
Query: 108 ETCIETLPDECLFEILRRLPAGQDRGNCMSVSKRWLMLLSNICENEI---CGNKSTGNEN 164
ET I LPD+CL I +RL + D + RWL + NI + C +
Sbjct: 12 ETSIIHLPDDCLSFIFQRLDSVADHDSFGLTCHRWLNI-QNISRRSLQFQCSFSVLNPSS 70
Query: 165 GEQEEGDLEFGN-EGFLTR------------------SFEGEKATDVRVAAMSV----GT 201
Q D+ + LTR S + + R+ + + G
Sbjct: 71 LSQTNPDVSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGI 130
Query: 202 ASRG---------GLGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTLWCIPTISDEGL 252
+ G L +++ CN ++D+GL+ +A SLK + L P +SD G+
Sbjct: 131 SDDGISTIASFCPNLSVVSLYRCN----ISDIGLETLARASLSLKCVNLSYCPLVSDFGI 186
Query: 253 IEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCP--------------- 297
++ C QLE +++ C +I+G F + P+L + +SC
Sbjct: 187 KALSQACLQLESVKISNCKSITGVGFSGCS---PTLGYVDADSCQLEPKGITGIISGGGI 243
Query: 298 ----------NIGNGGLQAIGK--CPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVL 345
I GL IG L+ ++++ C VGD+ I + + E
Sbjct: 244 EFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQE---- 299
Query: 346 ESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVT 405
LA+ I+ + V G+ + L L + C +
Sbjct: 300 -------WNLALCHEVKISGWEAV-----------------GKWCRNLKKLHVNRCRNLC 335
Query: 406 DIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSF 438
D GL+A+ GC N++I + A L+ + F
Sbjct: 336 DQGLLALRCGCMNLQILYMNGNARLTPTAIEMF 368
>AT3G07550.1 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 552 LVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVS 611
L +++LSGCT L D + SL + G L L L+ C ISD + IA CP LS + +
Sbjct: 93 LEHLSLSGCTVLNDSSLDSL-RYPGARLHTLYLDCCFGISDDGISTIASFCPNLSVVSLY 151
Query: 612 RCGITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNCKGIS 669
RC I+D G+ LA L+LK ++L+ C VS+ G++AL + L+ + I NCK I+
Sbjct: 152 RCNISDIGLETLARAS-LSLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSIT 208
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 26/255 (10%)
Query: 419 MKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLA 478
++ L C L+D+ L S + +LYL+ C I+ G + C L V+SL
Sbjct: 93 LEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASFCP-NLSVVSLY 151
Query: 479 SCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITD 538
C I ++ L A S++ +++ CP D I L + C QLE V+++ IT
Sbjct: 152 RC-NISDIGLETLARASL-SLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSITG 209
Query: 539 AGFL---PLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCS----------------- 578
GF P L A + G T + + + + G S
Sbjct: 210 VGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIAS 269
Query: 579 -LEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRCG-ITDTGIAALAHGKQLNLKVLSL 636
L +LNL C+ + D S+ AIA CPLL + +++ C + +G A+ + NLK L +
Sbjct: 270 KLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCR-NLKKLHV 328
Query: 637 AGCTSVSNKGVRALK 651
C ++ ++G+ AL+
Sbjct: 329 NRCRNLCDQGLLALR 343
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 128/276 (46%), Gaps = 42/276 (15%)
Query: 349 AVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIG 408
++D +L + + G + L L+C +S+ G + + L+ + + C+ ++DIG
Sbjct: 103 VLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASF--CPNLSVVSLYRCN-ISDIG 159
Query: 409 LVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNC 468
L + + ++K L C +SD G+ + ++A +ES+ + C IT +GF G C
Sbjct: 160 LETLARASLSLKCVNLSYCPLVSDFGIKALSQACLQLESVKISNCKSITGVGFSG----C 215
Query: 469 AAKLKVLSLASCY-------------GIKNLN-------LRLPAVLPCGS-----IESLS 503
+ L + SC GI+ LN +R ++P GS + L+
Sbjct: 216 SPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIASKLRILN 275
Query: 504 IHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSGA---GLVNVNLSGC 560
+ C GD +I + K CP L+ L + +G+ E+ G L ++++ C
Sbjct: 276 LRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGW----EAVGKWCRNLKKLHVNRC 331
Query: 561 TKLTDQVVLSLVKLHGC-SLEVLNLNGCKKISDASL 595
L DQ +L+L GC +L++L +NG +++ ++
Sbjct: 332 RNLCDQGLLALRC--GCMNLQILYMNGNARLTPTAI 365
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 144/393 (36%), Gaps = 98/393 (24%)
Query: 108 ETCIETLPDECLFEILRRLPAGQDRGNCMSVSKRWLMLLSNICENEI---CGNKSTGNEN 164
ET I LPD+CL I +RL + D + RWL + NI + C +
Sbjct: 12 ETSIIHLPDDCLSFIFQRLDSVADHDSFGLTCHRWLNI-QNISRRSLQFQCSFSVLNPSS 70
Query: 165 GEQEEGDLEFGN-EGFLTR------------------SFEGEKATDVRVAAMSV----GT 201
Q D+ + LTR S + + R+ + + G
Sbjct: 71 LSQTNPDVSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGI 130
Query: 202 ASRG---------GLGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTLWCIPTISDEGL 252
+ G L +++ CN ++D+GL+ +A SLK + L P +SD G+
Sbjct: 131 SDDGISTIASFCPNLSVVSLYRCN----ISDIGLETLARASLSLKCVNLSYCPLVSDFGI 186
Query: 253 IEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCP--------------- 297
++ C QLE +++ C +I+G F + P+L + +SC
Sbjct: 187 KALSQACLQLESVKISNCKSITGVGFSGCS---PTLGYVDADSCQLEPKGITGIISGGGI 243
Query: 298 ----------NIGNGGLQAIGK--CPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVL 345
I GL IG L+ ++++ C VGD+ I + + E
Sbjct: 244 EFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQE---- 299
Query: 346 ESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVT 405
LA+ I+ + V G+ + L L + C +
Sbjct: 300 -------WNLALCHEVKISGWEAV-----------------GKWCRNLKKLHVNRCRNLC 335
Query: 406 DIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSF 438
D GL+A+ GC N++I + A L+ + F
Sbjct: 336 DQGLLALRCGCMNLQILYMNGNARLTPTAIEMF 368
>AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 |
chr5:23449916-23450915 REVERSE LENGTH=300
Length = 300
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 44/228 (19%)
Query: 114 LPDECLFEILRRLPAGQDRGNCMSVSKRWLMLLSNICENEICGNKSTGNENGEQEEGDLE 173
L E L I+ RL + M V K WL +C + + DLE
Sbjct: 11 LAPEILINIISRLTIQELWTGPMFVQKSWL----TVCRDPYLWSI-----------FDLE 55
Query: 174 --FGNEGFLTRSFEGEKATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAIAH 231
F + T + E V + SV S GGL K+ +R C +D L A
Sbjct: 56 PWFDSYPESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC------SDHALSYAAD 109
Query: 232 GCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSL--- 288
CP+L++L + P ++D + +IA RC L++L++ C IS V I +NCP+L
Sbjct: 110 RCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRIL 169
Query: 289 ----------------THFSIESCPNIGNGGLQAIGK-CPNLKSVSIK 319
T + +++CP G+ AIGK NL+ + I+
Sbjct: 170 KRNLMDWSSRHIGSVPTEY-LDACPQDGDTEADAIGKHMINLEHLEIQ 216
>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting protein
2 | chr5:26831677-26833260 REVERSE LENGTH=527
Length = 527
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 172/419 (41%), Gaps = 54/419 (12%)
Query: 114 LPDECLFEILRRLPAGQDRGNCMSVSKRWLMLLSNICENEICGNKSTGNENGEQEEGDLE 173
LPDECL + + L AG DR C V KRWL++ + + L+
Sbjct: 46 LPDECLAHVFQFLGAG-DRKRCSLVCKRWLLV-----------------DGQSRHRLSLD 87
Query: 174 FGNE--GFLTRSFEGEKATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAIAH 231
+E FLT F R +++ KLA+R ++D L I+
Sbjct: 88 AKDEISSFLTSMFN-------RFDSVT----------KLALRCDRKSVSLSDEALAMISV 130
Query: 232 GCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHF 291
C +L + L I+D G+ + A C L+KL +G C N K A+ ++C L
Sbjct: 131 RCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSC-NFGAKGVNAMLEHCKLLEEL 189
Query: 292 SIESCPNIGNGG----LQAIGKCPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLES 347
S++ I L +L+S+ +K+ V Q L+++ + ++
Sbjct: 190 SVKRLRGIHEAAELIHLPDDASSSSLRSICLKEL--VNGQVFEPLLATTRTLKTLKIIRC 247
Query: 348 LAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDI 407
L D L +I + +++++ L L VS+ G + ++ L + C ++
Sbjct: 248 LGDWDKVLQMIANGKSSLSEIHLERL-QVSDIGLSAISKCSNVETLHIVKTPEC---SNF 303
Query: 408 GLVAIGKGCPNMKIFQLQ--KCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLL 465
GL+ + + C ++ + + + D GL+S AK +++ L L + T + +
Sbjct: 304 GLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQELVLIGVN-ATHMSLAAIA 362
Query: 466 FNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQ 524
NC KL+ L+L I + + A CG++ I CP D I L CP
Sbjct: 363 SNC-EKLERLALCGSGTIGDTEIACIA-RKCGALRKFCIKGCP-VSDRGIEALAVGCPN 418
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 21/307 (6%)
Query: 246 TISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQ 305
++SDE L I+ RC L +++L C I+ AKNC +L S+ SC N G G+
Sbjct: 119 SLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSC-NFGAKGVN 177
Query: 306 A-IGKCPNLKSVSIKDCAGVGDQGIAGLI----SSASFVLERVVLESLAVSDLALAVIGH 360
A + C L+ +S+K G+ + A LI ++S L + L+ L + ++
Sbjct: 178 AMLEHCKLLEELSVKRLRGIHEA--AELIHLPDDASSSSLRSICLKELVNGQVFEPLLAT 235
Query: 361 YGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMK 420
T ++ CL + +K ++ NG+ L+ + + V+DIGL AI K C N++
Sbjct: 236 TRTLKTLKIIRCLGDW-DKVLQMIANGK--SSLSEIHLERLQ-VSDIGLSAISK-CSNVE 290
Query: 421 IFQLQKCAFLSDNGLVSFAKAAPSIESLYLE--ECHRITQLGFFGLLFNCAAKLKVLSLA 478
+ K S+ GL+ A+ + L+++ +RI G + +C L+ L L
Sbjct: 291 TLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHC-LNLQELVL- 348
Query: 479 SCYGIKNLNLRLPAVLP-CGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGIT 537
G+ ++ L A+ C +E L++ GD IA + + C L + G ++
Sbjct: 349 --IGVNATHMSLAAIASNCEKLERLALCGSGTIGDTEIACIARKCGALRKFCIKGCP-VS 405
Query: 538 DAGFLPL 544
D G L
Sbjct: 406 DRGIEAL 412
>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
chr1:17276103-17277659 REVERSE LENGTH=518
Length = 518
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 180/465 (38%), Gaps = 76/465 (16%)
Query: 90 TFLCRRGLASLSHLVSKEETCIETLPDECLFEILRRLPAGQDRGNCMSVSKRWLMLLSNI 149
+F + + S+ +S+ + +LPDECL + + L +G +R C V +RW+++
Sbjct: 20 SFTLKFPIESIESEISQPDY-TSSLPDECLALVFQFLNSG-NRKRCALVCRRWMIV---- 73
Query: 150 CENEICGNKSTGNENGEQEEGDLEFGNEGFLTRSFEGEKATDVRVAAMSVGTASRG---- 205
DL +R F+ ++ SV
Sbjct: 74 -------EGQNRYRLSLHARSDLITSIPSLFSR-FDSVTKLSLKCDRRSVSIGDEALVKI 125
Query: 206 -----GLGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCH 260
L +L +R C R +TDVG+ A A C LKI + +G+ + + C
Sbjct: 126 SLRCRNLKRLKLRAC---RELTDVGMAAFAENCKDLKIFSCGSC-DFGAKGVKAVLDHCS 181
Query: 261 QLEKLELGQCPNISGKAFVAIAKNC--PSLTHFSIESC--PNIGNG---GLQAIGKCPNL 313
LE+L + + + F IA P + S++S + NG G +G NL
Sbjct: 182 NLEELSIKRL-----RGFTDIAPEMIGPGVAASSLKSICLKELYNGQCFGPVIVGA-KNL 235
Query: 314 KSVSIKDCAGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCL 373
KS+ + C+G D + + V+E + LE + VSD+AL+ I +
Sbjct: 236 KSLKLFRCSGDWDLLLQEMSGKDHGVVE-IHLERMQVSDVALSAISY------------- 281
Query: 374 PNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQ--KCAFLS 431
L +L +V T+ GL AI + C ++ + K +
Sbjct: 282 ----------------CSSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIG 325
Query: 432 DNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLP 491
D GLV+ AK ++ L L + T G+L L+ L+L C + L
Sbjct: 326 DEGLVAVAKFCSQLQELVLIGVNPTTL--SLGMLAAKCLNLERLALCGCDTFGDPELSCI 383
Query: 492 AVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGI 536
A C ++ L I +CP D I L CP L V++ G+
Sbjct: 384 AA-KCPALRKLCIKNCP-ISDVGIENLANGCPGLTKVKIKKCKGV 426
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 116/288 (40%), Gaps = 58/288 (20%)
Query: 391 QKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAF-----------------LSDN 433
+ L L + +C +TD+G+ A + C ++KIF C F LS
Sbjct: 130 RNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSCDFGAKGVKAVLDHCSNLEELSIK 189
Query: 434 GLVSFAKAAP----------SIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGI 483
L F AP S++S+ L+E + FG + A LK L L C G
Sbjct: 190 RLRGFTDIAPEMIGPGVAASSLKSICLKELYNGQ---CFGPVIVGAKNLKSLKLFRCSGD 246
Query: 484 KNLNLR-----------------------LPAVLPCGSIESLSIHDCPGFGDATIAVLGK 520
+L L+ L A+ C S+ESL + P + +A + +
Sbjct: 247 WDLLLQEMSGKDHGVVEIHLERMQVSDVALSAISYCSSLESLHLVKTPECTNFGLAAIAE 306
Query: 521 LCPQLEHVELNGLSG--ITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHGCS 578
C +L + ++G I D G + + + + L + L G T + L ++ +
Sbjct: 307 KCKRLRKLHIDGWKANLIGDEGLVAVAKFC-SQLQELVLIGVNPTT--LSLGMLAAKCLN 363
Query: 579 LEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRCGITDTGIAALAHG 626
LE L L GC D L IA CP L L + C I+D GI LA+G
Sbjct: 364 LERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISDVGIENLANG 411
>AT1G80630.1 | Symbols: | RNI-like superfamily protein |
chr1:30308879-30310615 REVERSE LENGTH=578
Length = 578
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 164/397 (41%), Gaps = 68/397 (17%)
Query: 247 ISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQA 306
+SD G+IE+++ L K+ + I+ K+ +A+++NC L C I + ++
Sbjct: 150 VSDSGVIELSSNLKGLLKINISGNSFITDKSLIALSQNCLLLREIIFRDCDFISSDCIKF 209
Query: 307 IGK-CPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAV 365
+ + NL+S++I G+G + L++ A F+ R + E L +SD L+
Sbjct: 210 VLRNSRNLESLAIN---GIGLRPRESLLTDA-FLFARCLTE-LDLSDSFLS--------- 255
Query: 366 TDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQ 425
DL+ CL L L + CHG T G++ + ++ L+
Sbjct: 256 DDLL--CLI------------ASAKLPLKKLLLSDCHGFTFDGILYLLDKYQSLVHLNLK 301
Query: 426 KCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGI-- 483
FLSD ++ + L L C ++T L FF ++ C + ++ + + +G+
Sbjct: 302 GANFLSDEMVMKLGMFFRRLTFLNLSFCSKLTGLAFFSIIERCVSLRCMIMVGTNFGVEE 361
Query: 484 ------------------KNLNLRLPAVLP-----CGSIESLSIHDCPGFGDATIAVLGK 520
+N NL L L C IESL + CPG I + +
Sbjct: 362 YTKDTKDFKSGVKFLYLSRNHNL-LDECLEKISRHCPFIESLDVAQCPGITRDGILEVWR 420
Query: 521 LCPQLEHVELNGLSGITDAGF----LPLLESSGAGLVNVNLSGCTKLTDQVVLSLVKLHG 576
C +L ++++ +GI G LP LES L C D L ++
Sbjct: 421 NCGKLRSLDISRCTGIKSLGVVDFELPKLES---------LRACGTWIDDEALDMISKKC 471
Query: 577 CSLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRC 613
L L+L GC +S + + SC L ++++ C
Sbjct: 472 RGLLHLDLQGCLNVSSRGVKEVVQSCIRLREINLKYC 508
>AT2G17020.1 | Symbols: | F-box/RNI-like superfamily protein |
chr2:7396559-7398787 REVERSE LENGTH=656
Length = 656
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 13/270 (4%)
Query: 219 RPVTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAF 278
R V+D G+ +A C ++ + L ++D G I + C L K + P ++ F
Sbjct: 311 RRVSDQGMLFLADKCLGMETICLGGFCRVTDAGFKTILHSCASLSKFSIYHGPKLTDLVF 370
Query: 279 VAIAKNCPSLTHFSIESCPNIGNGGLQAIGKCPNLKSVSIKDCAGVGDQGIAGLISSASF 338
I SL+H S+ C + + +Q + L+++ ++ C + D+ + + S
Sbjct: 371 HDILATTLSLSHVSLRRCHLLTDHAIQKLASSLKLENLDLRGCRNLRDETLTAV--SHLP 428
Query: 339 VLERVVLESLAVSDLALAVIGHYGI--AVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAAL 396
L+ ++L+ +SD L+ + G+ ++ L + N+++K + +G L L
Sbjct: 429 KLKVLLLDGADISDTGLSYLKE-GVLDSLVSLSVRGCRNLTDKFMSTLFDGSSKLALREL 487
Query: 397 GIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKA--------APSIESL 448
+ + +TD + A+ K + QL++C + D +++ A S+ L
Sbjct: 488 DLSNLPNLTDAAIFALAKSGAPITKLQLRECRLIGDASVMALASTRVYEDECPGSSLCLL 547
Query: 449 YLEECHRITQLGFFGLLFNCAAKLKVLSLA 478
L +C ITQL F L +LK L +
Sbjct: 548 DLYDCGGITQLSFKWLKKPFFPRLKWLGIT 577
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 105/256 (41%), Gaps = 61/256 (23%)
Query: 430 LSDNGLVSFAKAAPS-----IESLYLEECHRITQLGFFGLL-FNCAAKLKVLSLASCYGI 483
++D + + +K+ PS I LE+ +++ L FGL N KLK LSL
Sbjct: 246 ITDAVVKAISKSLPSLIDLDIRDAPLEDPRQVSDLTDFGLHEINQNGKLKHLSL------ 299
Query: 484 KNLNLRLPAVLPCGSIESLSIHDCPGF----GDATIAVLGKLCPQLEHVELNGLSGITDA 539
I S H P + D + L C +E + L G +TDA
Sbjct: 300 ---------------IRSQEFH--PTYFRRVSDQGMLFLADKCLGMETICLGGFCRVTDA 342
Query: 540 GFLPLLESSGA-------------------------GLVNVNLSGCTKLTDQVVLSLVKL 574
GF +L S + L +V+L C LTD + L
Sbjct: 343 GFKTILHSCASLSKFSIYHGPKLTDLVFHDILATTLSLSHVSLRRCHLLTDHAIQKLAS- 401
Query: 575 HGCSLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRCGITDTGIAALAHGKQLNLKVL 634
LE L+L GC+ + D +L A++ P L L + I+DTG++ L G +L L
Sbjct: 402 -SLKLENLDLRGCRNLRDETLTAVS-HLPKLKVLLLDGADISDTGLSYLKEGVLDSLVSL 459
Query: 635 SLAGCTSVSNKGVRAL 650
S+ GC ++++K + L
Sbjct: 460 SVRGCRNLTDKFMSTL 475
>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 472 LKVLSLASCYGIKNLNLRLPAVLP-CGSIESLSI-HDCPGFGDATIAVLGKLCPQLEHVE 529
L LSL+ C KN+N + ++ P +++L + D P D + + C +L+ ++
Sbjct: 66 LTRLSLSWCK--KNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLD 123
Query: 530 LNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVV---------LSLVKLHGC--- 577
L+ S ITD L L +NLSGCT +D + L ++ L GC
Sbjct: 124 LSKSSKITDHSLYSLARGC-TNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEA 182
Query: 578 --------------SLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRCG-ITDTGIAA 622
L+ LNL C+ ISD ++++A CP L LD+ C ITD + A
Sbjct: 183 VSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVA 242
Query: 623 LAHGKQLNLKVLSLAGCTSVSNKGVRALKKLG 654
LA + ++L+ L L C +++++ + +L + G
Sbjct: 243 LA-NRCIHLRSLGLYYCRNITDRAMYSLAQSG 273
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 19/236 (8%)
Query: 218 DRP-VTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGK 276
D+P + D ++AIA+ C L+ L L I+D L +A C L KL L C + S
Sbjct: 100 DKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDT 159
Query: 277 AFVAIAKNCPSLTHFSIESCPN-IGNGGLQAIGK-CPNLKSVSIKDCAGVGDQGIAGLIS 334
A + + C L ++ C + + LQAIG+ C L+S+++ C + D G+ L
Sbjct: 160 ALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAY 219
Query: 335 SASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLA 394
+ + + ++D ++ + + I + L L N+++ R + LA
Sbjct: 220 GCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITD---------RAMYSLA 270
Query: 395 ALGIVSCHGVTDIGLVAIGKGCPN---MKIFQLQKCAFLSDNGLVSFAKAAPSIES 447
G+ + H + A+ KG + ++ + +C +L+ + + + P++ +
Sbjct: 271 QSGVKNKHEM----WRAVKKGKFDEEGLRSLNISQCTYLTPSAVQAVCDTFPALHT 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 96/240 (40%), Gaps = 49/240 (20%)
Query: 430 LSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLR 489
L DN + + A ++ L L + +IT + L C
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCT-------------------- 143
Query: 490 LPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSG 549
++ L++ C F D +A L + C +L+ + L G L + +
Sbjct: 144 --------NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENC 195
Query: 550 AGLVNVNLSGCTKLTDQVVLSLVKLHGC-SLEVLNLNGCKKISDASLIAIAGSCPLLSDL 608
L ++NL C ++D V+SL +GC L L+L C I+D S++A+A C L L
Sbjct: 196 NQLQSLNLGWCENISDDGVMSLA--YGCPDLRTLDLCSCVLITDESVVALANRCIHLRSL 253
Query: 609 DVSRC-GITDTGIAALAHGKQLN-----------------LKVLSLAGCTSVSNKGVRAL 650
+ C ITD + +LA N L+ L+++ CT ++ V+A+
Sbjct: 254 GLYYCRNITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSLNISQCTYLTPSAVQAV 313
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 551 GLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCK-KISDASLIAIAGSCPLLSDLD 609
GL ++LS C K + +VLSL L+ L L K ++ D ++ AIA C L DLD
Sbjct: 65 GLTRLSLSWCKKNMNSLVLSLAP-KFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLD 123
Query: 610 VSRCG-ITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNC 665
+S+ ITD + +LA G NL L+L+GCTS S+ + L + L LN+ C
Sbjct: 124 LSKSSKITDHSLYSLARGCT-NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGC 179
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 215 CNSDRPVTDVGLKAIAHGCPSLKILTL-WCIPTISDEGLIEIANRCHQLEKLELGQCPNI 273
C V+D L+AI C L+ L L WC ISD+G++ +A C L L+L C I
Sbjct: 177 CGCVEAVSDNTLQAIGENCNQLQSLNLGWC-ENISDDGVMSLAYGCPDLRTLDLCSCVLI 235
Query: 274 SGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQAIGK 309
+ ++ VA+A C L + C NI + + ++ +
Sbjct: 236 TDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQ 271
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
protein | chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 472 LKVLSLASCYGIKNLNLRLPAVLP-CGSIESLSI-HDCPGFGDATIAVLGKLCPQLEHVE 529
L LSL+ C KN+N + ++ P +++L + D P D + + C +L+ ++
Sbjct: 66 LTRLSLSWCK--KNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLD 123
Query: 530 LNGLSGITDAGFLPLLESSGAGLVNVNLSGCTKLTDQVV---------LSLVKLHGC--- 577
L+ S ITD L L +NLSGCT +D + L ++ L GC
Sbjct: 124 LSKSSKITDHSLYSLARGC-TNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEA 182
Query: 578 --------------SLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRCG-ITDTGIAA 622
L+ LNL C+ ISD ++++A CP L LD+ C ITD + A
Sbjct: 183 VSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVA 242
Query: 623 LAHGKQLNLKVLSLAGCTSVSNKGVRALKKLG 654
LA + ++L+ L L C +++++ + +L + G
Sbjct: 243 LA-NRCIHLRSLGLYYCRNITDRAMYSLAQSG 273
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 19/236 (8%)
Query: 218 DRP-VTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGK 276
D+P + D ++AIA+ C L+ L L I+D L +A C L KL L C + S
Sbjct: 100 DKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDT 159
Query: 277 AFVAIAKNCPSLTHFSIESCPN-IGNGGLQAIGK-CPNLKSVSIKDCAGVGDQGIAGLIS 334
A + + C L ++ C + + LQAIG+ C L+S+++ C + D G+ L
Sbjct: 160 ALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAY 219
Query: 335 SASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLA 394
+ + + ++D ++ + + I + L L N+++ R + LA
Sbjct: 220 GCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITD---------RAMYSLA 270
Query: 395 ALGIVSCHGVTDIGLVAIGKGCPN---MKIFQLQKCAFLSDNGLVSFAKAAPSIES 447
G+ + H + A+ KG + ++ + +C +L+ + + + P++ +
Sbjct: 271 QSGVKNKHEM----WRAVKKGKFDEEGLRSLNISQCTYLTPSAVQAVCDTFPALHT 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 96/240 (40%), Gaps = 49/240 (20%)
Query: 430 LSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLR 489
L DN + + A ++ L L + +IT + L C
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCT-------------------- 143
Query: 490 LPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSG 549
++ L++ C F D +A L + C +L+ + L G L + +
Sbjct: 144 --------NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENC 195
Query: 550 AGLVNVNLSGCTKLTDQVVLSLVKLHGC-SLEVLNLNGCKKISDASLIAIAGSCPLLSDL 608
L ++NL C ++D V+SL +GC L L+L C I+D S++A+A C L L
Sbjct: 196 NQLQSLNLGWCENISDDGVMSLA--YGCPDLRTLDLCSCVLITDESVVALANRCIHLRSL 253
Query: 609 DVSRC-GITDTGIAALAHGKQLN-----------------LKVLSLAGCTSVSNKGVRAL 650
+ C ITD + +LA N L+ L+++ CT ++ V+A+
Sbjct: 254 GLYYCRNITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSLNISQCTYLTPSAVQAV 313
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 551 GLVNVNLSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCK-KISDASLIAIAGSCPLLSDLD 609
GL ++LS C K + +VLSL L+ L L K ++ D ++ AIA C L DLD
Sbjct: 65 GLTRLSLSWCKKNMNSLVLSLAP-KFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLD 123
Query: 610 VSRCG-ITDTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKKLGSSLDGLNIKNC 665
+S+ ITD + +LA G NL L+L+GCTS S+ + L + L LN+ C
Sbjct: 124 LSKSSKITDHSLYSLARGCT-NLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGC 179
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 215 CNSDRPVTDVGLKAIAHGCPSLKILTL-WCIPTISDEGLIEIANRCHQLEKLELGQCPNI 273
C V+D L+AI C L+ L L WC ISD+G++ +A C L L+L C I
Sbjct: 177 CGCVEAVSDNTLQAIGENCNQLQSLNLGWC-ENISDDGVMSLAYGCPDLRTLDLCSCVLI 235
Query: 274 SGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQAIGK 309
+ ++ VA+A C L + C NI + + ++ +
Sbjct: 236 TDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQ 271
>AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 |
chr4:4197847-4199511 REVERSE LENGTH=554
Length = 554
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 172/450 (38%), Gaps = 48/450 (10%)
Query: 111 IETLPDECLFEILRRLPAGQDRGNCMSVSKRWLMLLSNICENEICGNKSTGNENGEQEEG 170
I LPDECL I + L D C V +RWL +
Sbjct: 74 ISNLPDECLSLIFQSLTCA-DLKRCSLVCRRWLTI------------------------- 107
Query: 171 DLEFGNEGFLTRSFEGEKATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAIA 230
EG + +D+ S+ T + KL +R + D I+
Sbjct: 108 ------EGQCRHRLSLKAQSDLISVIPSLFTRF-DSVTKLVLRSDRRSLGICDNAFVMIS 160
Query: 231 HGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTH 290
C +L L L P ISD G+I C L+K+ G C K A+ C L
Sbjct: 161 VRCRNLTRLKLRGCPEISDLGIIGFTENCRSLKKVSFGSC-GFGVKGMNALLNTCLGLEE 219
Query: 291 FSIESCPNIGNGG--LQAIGKCPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESL 348
S++ IG G + G +LK + +K+ Q A L+S A + +
Sbjct: 220 LSVKRLRGIGAGAELIGPGGAAGSLKVICLKELH--NGQCFAPLLSGAKGLRILKIFRCS 277
Query: 349 AVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIG 408
D + A+ ++ L + +S+ G + G++ L + C T++G
Sbjct: 278 GDWDRVFEAVRDKVNAIVEIHLERI-QMSDLGLTALSKCSGVEVLHLVKTPDC---TNVG 333
Query: 409 LVAIGKGCPNMKIFQLQ--KCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLF 466
L + + C ++ + K + D GL+ AK +++ L L + T+L ++
Sbjct: 334 LALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVLIGVN-PTKLSLEAIVS 392
Query: 467 NCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLCPQLE 526
NC L+ L+L + + L A C ++ L I +CP D I LG CP L
Sbjct: 393 NC-LNLERLALCGSDTVGDTELCCIAE-KCLALRKLCIKNCP-ITDDGIKALGNGCPNLL 449
Query: 527 HVELNGLSGITDAGFLPLLESSGAGLVNVN 556
V++ G+T G L + +VN++
Sbjct: 450 KVKVKKCRGVTTQGADLLRKRRALLVVNLD 479
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 163/396 (41%), Gaps = 77/396 (19%)
Query: 263 EKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQAIGK-CPNLKSVSIKDC 321
++ LG C N AFV I+ C +LT + CP I + G+ + C +LK VS C
Sbjct: 145 DRRSLGICDN----AFVMISVRCRNLTRLKLRGCPEISDLGIIGFTENCRSLKKVSFGSC 200
Query: 322 AGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGF 381
G G +G+ L+++ + LE L+V L GI G
Sbjct: 201 -GFGVKGMNALLNTC------LGLEELSVKRL-------RGIGA--------------GA 232
Query: 382 WVMGNGRGLQKLAALGIVSCH-GVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAK 440
++G G L + + H G L++ KG +KIF +C+ D +
Sbjct: 233 ELIGPGGAAGSLKVICLKELHNGQCFAPLLSGAKGLRILKIF---RCSGDWDRVFEAVRD 289
Query: 441 AAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIE 500
+I ++LE Q+ GL +L+ C G++ L+L
Sbjct: 290 KVNAIVEIHLER----IQMSDLGLT----------ALSKCSGVEVLHL------------ 323
Query: 501 SLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLES----SGAGLVNVN 556
+ DC G A +A KL +L H++ + I D G + + + L+ VN
Sbjct: 324 -VKTPDCTNVGLALVAERCKLLRKL-HIDGWKTNRIGDEGLIVVAKYCWNLQELVLIGVN 381
Query: 557 LSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGSCPLLSDLDVSRCGIT 616
TKL+ + ++S + +LE L L G + D L IA C L L + C IT
Sbjct: 382 P---TKLSLEAIVS----NCLNLERLALCGSDTVGDTELCCIAEKCLALRKLCIKNCPIT 434
Query: 617 DTGIAALAHGKQLNLKVLSLAGCTSVSNKGVRALKK 652
D GI AL +G NL + + C V+ +G L+K
Sbjct: 435 DDGIKALGNGCP-NLLKVKVKKCRGVTTQGADLLRK 469
>AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 |
chr3:18572788-18574356 FORWARD LENGTH=522
Length = 522
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 15/302 (4%)
Query: 246 TISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQ 305
++SDE L ++ RC L +++L C I+ + A+NC SL S SC G G+
Sbjct: 117 SLSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFARNCKSLRKLSCGSC-TFGAKGIN 175
Query: 306 A-IGKCPNLKSVSIKDCAGVGDQGIAGLIS-SASFVLERVVLESLAVSDLALAVIGHYGI 363
A + C L+ +S+K G+ + +A I S S L V L+ L + +++ +
Sbjct: 176 AMLEHCKVLEELSLKRIRGLHE--LAEPIKLSLSASLRSVFLKELVNGQVFGSLVATRTL 233
Query: 364 AVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQ 423
++ CL N ++ F + GNG L + + VTDIGL I K C N++
Sbjct: 234 KKVK-IIRCLGNW-DRVFEMNGNGNS--SLTEIRLERLQ-VTDIGLFGISK-CSNLETLH 287
Query: 424 LQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGI 483
+ K S+ GL S + + L+++ R+ ++G GL+ L + L G+
Sbjct: 288 IVKTPDCSNLGLASVVERCKLLRKLHIDG-WRVKRIGDQGLMSVAKHCLNLQELV-LIGV 345
Query: 484 KNLNLRLPAVLP-CGSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFL 542
+ L A+ C +E L++ GDA I + + C L + G I+D G
Sbjct: 346 DATYMSLSAIASNCKKLERLALCGSGTIGDAEIGCIAEKCVTLRKFCIKGCL-ISDVGVQ 404
Query: 543 PL 544
L
Sbjct: 405 AL 406
>AT5G07670.1 | Symbols: | RNI-like superfamily protein |
chr5:2430421-2432065 FORWARD LENGTH=476
Length = 476
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 174/448 (38%), Gaps = 86/448 (19%)
Query: 97 LASLSHLVSKEETCIET----LPDECLFEILRRLPAGQDRGNCMSVSKRWLMLLSNICEN 152
SL+ +SK +T + LPD L +++++P Q R N V KRW L + +
Sbjct: 44 FQSLTPPISKSKTLLPDFTLLLPDLILIRVIQKIPNSQ-RKNLSLVCKRWFRLHGRLVRS 102
Query: 153 EICGNKSTGNENGEQEEGDLEFGNEGFLTRSFEGEKATDV-----------------RVA 195
+ D EF + G L F + D+ R+
Sbjct: 103 --------------FKVSDWEFLSSGRLISRFPNLETVDLVSGCLISPPNLGILVNHRIV 148
Query: 196 AMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAIAHGCPSLKILTLWCIPTISDEGLIEI 255
+ +VG S + + + + GLKA+A GC +L+ L + S+ GL+ +
Sbjct: 149 SFTVGVGSYQSWSFFEENLLSVE--LVERGLKALAGGCSNLRKLV---VTNTSELGLLNV 203
Query: 256 ANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHF-SIESCPN--IGNGGLQAIGK-CP 311
A C +L++LEL +C + S + +N L +++ N + + GL + + C
Sbjct: 204 AEECSRLQELELHKCSD-SVLLGIGAFENLQILRLVGNVDGLYNSLVSDIGLMILAQGCK 262
Query: 312 NLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLN 371
L + + C G G GI + +LE L V D
Sbjct: 263 RLVKLELVGCEG-GFDGIKEIGECCQ------MLEELTVCD------------------- 296
Query: 372 CLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLS 431
N E G+ +G R + L L +VSC + + ++ CP ++ QL+KC
Sbjct: 297 ---NKMESGW--LGGLRYCENLKTLKLVSCKKIDNDPDESLSCCCPALERLQLEKCQLRD 351
Query: 432 DNGLVSFAKAAPSIESLYLEECHRITQLGFFGLLFNCA---AKLKVLSLASCYGIKNLNL 488
N + + K + + ++C G +F+ A ++K+L L C + L
Sbjct: 352 KNTVKALFKMCEAAREIVFQDC-----WGLDNDIFSLAMAFGRVKLLYLEGCSLLTTSGL 406
Query: 489 RLPAVLPCGSIESLSIHDCPGFGDATIA 516
+L +E L + C D+ ++
Sbjct: 407 E-SVILHWHELEHLKVVSCKNIKDSEVS 433
>AT4G30640.1 | Symbols: | RNI-like superfamily protein |
chr4:14952670-14953682 FORWARD LENGTH=301
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 21/188 (11%)
Query: 114 LPDECLFEILRRLPAGQDRGNCMSVSKRWLMLLSNICENEICGNKSTGNENGEQEEGDLE 173
L ECL +I RL Q M VSK W+ N C + T N + E L
Sbjct: 23 LTRECLLDIFSRLSQEQRWIGPMLVSKNWM----NACYD------PTLNTIFDLETRFLS 72
Query: 174 FGNE-GFLTRSFEGEKATDVRVAAMSVGTASRGGLGKLAIRGCNSDRPVTDVGLKAIAHG 232
F + T FE + + +R SV S GGL ++ IR C T+ L A
Sbjct: 73 FPESINWWTPEFEDKVDSFLR----SVVDRSEGGLTEIRIRHC------TERSLSYAAER 122
Query: 233 CPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFS 292
CP+L++L + P ++D + +IA C L +L++ I+ ++ + + ++C +L
Sbjct: 123 CPNLEVLWIKNCPNVTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILK 182
Query: 293 IESCPNIG 300
P +G
Sbjct: 183 RNLLPRLG 190
>AT5G21900.1 | Symbols: | RNI-like superfamily protein |
chr5:7238239-7240338 FORWARD LENGTH=544
Length = 544
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 138/331 (41%), Gaps = 35/331 (10%)
Query: 219 RPVTDVGL----KAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPNIS 274
R +TD + K +G PSL L+L ++D L+ I+ L+ + L +C ++
Sbjct: 236 RSMTDYTINQFFKRAPNGFPSLTTLSLQGAFCLTDNALLLISKSSPLLQYINLTECSLLT 295
Query: 275 GKAFVAIAKNCPSLTHFSIESCPNIGNGGLQAIGKCPNLKSVSIKDCAGVGDQGIAGLIS 334
+A +A S + + GG Q I K S S+ + +AGL+S
Sbjct: 296 YRALRILADKFGS-------TLRGLSIGGCQGIKKHKGFSS-SLYKFEKLNYLSVAGLVS 347
Query: 335 SASFVLERVVL-ESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKL 393
V+ + S ++DL+LA NC V+++ W +G R +KL
Sbjct: 348 VNDGVVRSFFMFRSSILTDLSLA--------------NC-NEVTDECMWHIG--RYCKKL 390
Query: 394 AALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAA-PSIESLYLEE 452
AL I +TD L I +GC +K +L F SD + +F + + S+ L L +
Sbjct: 391 EALDITDLDKLTDKSLEFITEGCRYLKSLKLTSNRF-SDECIAAFLEVSGGSLRELCLNK 449
Query: 453 CHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGD 512
+ F L C L+ L L+ C +K +LR + C S++SL + D
Sbjct: 450 VRDVGPETAFSLAKVCKM-LQFLDLSWCRRLKEDDLR-RILRCCSSLQSLKLFGWTQVED 507
Query: 513 ATIAVLGKLCPQLEHVELNGLSGITDAGFLP 543
+ L + + ++L L D F P
Sbjct: 508 TYLEELSRSDVHITGLKLTSLYAHLD-NFYP 537
>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
chr2:16672848-16675486 REVERSE LENGTH=592
Length = 592
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 56/245 (22%)
Query: 228 AIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKLELGQCPN----------ISGKA 277
+ CP+L++L + I D GL +A C QL++L + + + +S +
Sbjct: 312 TLIQKCPNLEVLETRNV--IGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRG 369
Query: 278 FVAIAKNCPSLTHFSIESCPNIGNGGLQAIGK-CPNL---------KSVSIKDCAGVGDQ 327
+A+A+ C L + ++ +I N L++IG NL + I D D
Sbjct: 370 LIALAQGCQELEYMAV-YVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPL--DN 426
Query: 328 GIAGL-ISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGN 386
G+ L I L ++DL L+ IG Y PNV W++
Sbjct: 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYS-----------PNVR----WML-- 469
Query: 387 GRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSIE 446
LG V G +D GL+ +GCPN++ +++ C F S+ + + PS+
Sbjct: 470 ---------LGYV---GESDEGLMEFSRGCPNLQKLEMRGCCF-SERAIAAAVTKLPSLR 516
Query: 447 SLYLE 451
L+++
Sbjct: 517 YLWVQ 521
>AT1G15740.1 | Symbols: | Leucine-rich repeat family protein |
chr1:5411509-5414544 FORWARD LENGTH=585
Length = 585
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 174/432 (40%), Gaps = 109/432 (25%)
Query: 247 ISDEGLIEIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCPNIGNGGLQA 306
I+D GL+ + C LE L C IS + V ++ +LT S I G++A
Sbjct: 150 ITDSGLVSLKG-CTNLESLNFNFCDQISNRGLVHLS-GLSNLTSLSFRRNAAITAQGMRA 207
Query: 307 IGKCPNLKSVSIKDCAGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVT 366
+ NLK + ++ C G+ D G+ L + LESL +
Sbjct: 208 LSNLVNLKKLDLEKCPGI-DGGLVHLRALTK-------LESLNIK--------------- 244
Query: 367 DLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGVTDIGL----------VAIGKGC 416
NC+ + + V+ N R LQ + C +TDIG+ + +GC
Sbjct: 245 --WCNCITDADMEPLSVLTNLRSLQ-------ICCSKITDIGISYLKGLNKLNLLNLEGC 295
Query: 417 PN--------------MKIFQLQKCAFLSDNGLVSFAKAAPSIESLYLEECHRITQLGFF 462
+ + L +C F SD+G F+ +I LG
Sbjct: 296 RHVTAACLDTLTALAGLMYLNLNRCNF-SDSGCEKFSDLIN----------LKILNLGMN 344
Query: 463 GLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGSIESLSIHDCPGFGDATIAVLGKLC 522
+ +C LK L+ +ESL++ C + + + G L
Sbjct: 345 NITNSCLVHLKGLT---------------------KLESLNLDSCRIGDEGLVHLSGML- 382
Query: 523 PQLEHVELNGLSGITDAGFLPLLESSG-AGLVNVNLSGCTKLTDQVVLSLVKLHG-CSLE 580
+L+ +EL+ T+ G L SG + L ++NLS T +TD L KL G SL
Sbjct: 383 -ELKSLELSD----TEVGSNGLRHLSGLSNLESINLS-FTVVTDS---GLRKLSGLTSLR 433
Query: 581 VLNLNGCKKISDASLIAIAGSCPLLSDLDVSRCGITDTGIAALAHGKQLNLKVLSLAGC- 639
LNL+ + ++DA L A+ S L+ LD+ ITD+G L + K+L SL C
Sbjct: 434 TLNLDA-RHVTDAGLSALT-SLTGLTHLDLFGARITDSGTNHLRNLKKLQ----SLEICG 487
Query: 640 TSVSNKGVRALK 651
+++ GV+ +K
Sbjct: 488 GGLTDTGVKNIK 499
>AT2G42620.1 | Symbols: MAX2, ORE9, PPS | RNI-like superfamily
protein | chr2:17756170-17758251 FORWARD LENGTH=693
Length = 693
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 26/208 (12%)
Query: 254 EIANRCHQLEKLELGQCPNISGKAFVAIAKNCPSLTHFSIESCPN------IGNGGLQAI 307
++A R +L+ L V+I K+CP+L F + + +G+ L A+
Sbjct: 184 DVAARLTRLDLLTASFTEGYKSSEIVSITKSCPNLKTFRVACTFDPRYFEFVGDETLSAV 243
Query: 308 G-KCPNLKSVSIKDCAGVGD-QGIAGLISSASFVLERVVLESLA----VSDLALAV---I 358
P L + + D A + + + I G + S V ++E + + +L L V +
Sbjct: 244 ATSSPKLTLLHMVDTASLANPRAIPGTEAGDSAVTAGTLIEVFSGLPNLEELVLDVGKDV 303
Query: 359 GHYGIAVTDLVLNC----------LPNVSEKGFWVMGNGRGL-QKLAALGIVSCHGVTDI 407
H G+A+ L C V W +G L L +L I + +TD+
Sbjct: 304 KHSGVALEALNSKCKKLRVLKLGQFQGVCSATEWRRLDGVALCGGLQSLSIKNSGDLTDM 363
Query: 408 GLVAIGKGCPNMKIFQLQKCAFLSDNGL 435
GLVAIG+GC + F++Q C ++ +GL
Sbjct: 364 GLVAIGRGCCKLTTFEIQGCENVTVDGL 391
>AT5G51380.1 | Symbols: | RNI-like superfamily protein |
chr5:20875945-20877779 FORWARD LENGTH=479
Length = 479
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 7/223 (3%)
Query: 379 KGFWVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSF 438
+G N RGL+ + ++ + V+DIGL + +GC + +L C S +G+ +
Sbjct: 226 RGIAACENLRGLRLVGSVDGLYSSSVSDIGLTILAQGCKRLVKLELSGCEG-SFDGIKAI 284
Query: 439 AKAAPSIESLYLEECHRITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPCGS 498
+ +E L + + HR+ G+ L + LK L ++SC I + + C +
Sbjct: 285 GQCCEVLEELSICD-HRMDD-GWIAAL-SYFESLKTLLISSCRKIDSSPGPGKLLGSCPA 341
Query: 499 IESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNVNLS 558
+ESL + C + L K+C + V + G+ D F L + + ++L
Sbjct: 342 LESLQLRRCCLNDKEGMRALFKVCDGVTKVNIQDCWGLDDDSF--SLAKAFRRVRFLSLE 399
Query: 559 GCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASLIAIAGS 601
GC+ LT + S++ LH LE + + CK I D+ + A S
Sbjct: 400 GCSILTTSGLESVI-LHWEELESMRVVSCKNIKDSEISAALSS 441
>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 |
chr4:1405108-1407057 REVERSE LENGTH=585
Length = 585
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 123/303 (40%), Gaps = 50/303 (16%)
Query: 345 LESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNGRGLQKLAALGIVSCHGV 404
+E++A +L I + VTD CL ++ + L + SC G
Sbjct: 93 IEAMAAKSSSLEEIRMKRMVVTD---ECLEKIAA----------SFKDFKVLVLTSCEGF 139
Query: 405 TDIGLVAIGKGCPNMKIFQLQKCAF--LSDNGLVSFAKAAPSIESLYLEECHRITQLGFF 462
+ G+ AI C N+++ +L++C L + L F +++ S+ SL ++
Sbjct: 140 STDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESSTSLVSLDFSCLDSEVKISDL 199
Query: 463 GLLFNCAAKLKVLSLASCYGIKNLNLRL---PAVLPCGSIESLSIHDCPGFGDATIAVLG 519
L + + LK L L + L L P + G+ + F + A
Sbjct: 200 ERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGSFAAQLKPEAFSKLSEAFSN 259
Query: 520 KLCPQLEHVELNGLSGITDA--GFLPLLESSGAGLVNVNLSGCT-KLTDQVVLSLVKLHG 576
C QL+ LSG+ D +LP L S GL ++NLS T ++ D V L L
Sbjct: 260 --CKQLQ-----SLSGLWDVLPEYLPALYSVCPGLTSLNLSYATVRMPDLVEL----LRR 308
Query: 577 CS----LEVLNLNGCKKISDASLIAIAGSC---------PLLSDLDVSRCGITDTGIAAL 623
CS L V++L I D L A+A C P DLD + +T+ G+ +
Sbjct: 309 CSKLQKLWVMDL-----IEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGLVFV 363
Query: 624 AHG 626
+ G
Sbjct: 364 SKG 366
>AT4G24390.1 | Symbols: | RNI-like superfamily protein |
chr4:12613909-12615966 REVERSE LENGTH=623
Length = 623
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 29/238 (12%)
Query: 226 LKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKL--------ELGQCPNISGKA 277
LK I C ++++ W + +I DEGL +A C +L +L E + P +SG
Sbjct: 353 LKPIISNCHNIRVF--WALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGP-VSGVG 409
Query: 278 FVAIAKNCPSLTHFSIESCPNIGNGGLQAIGK-CPNLKSVSI---------KDCAGVGDQ 327
AI++ C L + C N+ NG + A+ + CP L + D
Sbjct: 410 LQAISEGCRKLESI-LYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDD 468
Query: 328 GIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNG 387
G ++ + L R+ + L ++D A + IG YG + L + N + +V+
Sbjct: 469 GFGAIVKNCK-KLTRLAVSGL-LTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGC 526
Query: 388 RGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSI 445
LQKL + D+GL + NM+ L C +S G + A P++
Sbjct: 527 PKLQKLE----IRDSPFGDVGLRSGMHRYSNMRFVWLSSC-LISRGGCRGVSHALPNV 579
>AT4G24390.2 | Symbols: | RNI-like superfamily protein |
chr4:12613909-12615966 REVERSE LENGTH=623
Length = 623
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 29/238 (12%)
Query: 226 LKAIAHGCPSLKILTLWCIPTISDEGLIEIANRCHQLEKL--------ELGQCPNISGKA 277
LK I C ++++ W + +I DEGL +A C +L +L E + P +SG
Sbjct: 353 LKPIISNCHNIRVF--WALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGP-VSGVG 409
Query: 278 FVAIAKNCPSLTHFSIESCPNIGNGGLQAIGK-CPNLKSVSI---------KDCAGVGDQ 327
AI++ C L + C N+ NG + A+ + CP L + D
Sbjct: 410 LQAISEGCRKLESI-LYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDD 468
Query: 328 GIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGFWVMGNG 387
G ++ + L R+ + L ++D A + IG YG + L + N + +V+
Sbjct: 469 GFGAIVKNCK-KLTRLAVSGL-LTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGC 526
Query: 388 RGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKAAPSI 445
LQKL + D+GL + NM+ L C +S G + A P++
Sbjct: 527 PKLQKLE----IRDSPFGDVGLRSGMHRYSNMRFVWLSSC-LISRGGCRGVSHALPNV 579
>AT5G51370.2 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20874192 FORWARD LENGTH=446
Length = 446
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 20/279 (7%)
Query: 322 AGVGDQGIAGLISSASFVLERVVLESLAVSDLALAVIGHYGIAVTDLVLNCLPNVSEKGF 381
+ V D+G+ ++S SF L + L+ + S+L L + + +L L+ + G
Sbjct: 136 SDVIDRGLR-ILSRESFDL--LNLKVINASELGLLSLAGDCSDLQELELHKCNDNLLHGI 192
Query: 382 WVMGNGRGLQKLAALGIVSCHGVTDIGLVAIGKGCPNMKIFQLQKCAFLSDNGLVSFAKA 441
N +GL+ + ++ + V+DIGL + +GC ++ +L C S +G+ + +
Sbjct: 193 AACKNLKGLRLVGSVDGLYSSSVSDIGLTFLAQGCRSLVKLELSGCEG-SFDGIKAIGQC 251
Query: 442 APSIESLYLEECHR-----ITQLGFFGLLFNCAAKLKVLSLASCYGIKNLNLRLPAVLPC 496
+E L + + HR I L +F LK+L ++SC I + C
Sbjct: 252 CEVLEELSICD-HRMDDGWIAALSYF-------ESLKILRISSCRKIDASPGPEKLLRSC 303
Query: 497 GSIESLSIHDCPGFGDATIAVLGKLCPQLEHVELNGLSGITDAGFLPLLESSGAGLVNVN 556
++ESL + C I L K+C V + G++D F L + + ++
Sbjct: 304 PAMESLQLKRCCLNDKEGIKALFKVCDGATEVNIQDCWGLSDDCF--SLAKAFRRVRFLS 361
Query: 557 LSGCTKLTDQVVLSLVKLHGCSLEVLNLNGCKKISDASL 595
L GC+ LT + S++ LH LE + + CK I D+ +
Sbjct: 362 LEGCSVLTSGGLESVI-LHWEELESMRVVSCKSIKDSEI 399