Miyakogusa Predicted Gene

Lj0g3v0073009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0073009.1 Non Chatacterized Hit- tr|H3DDP9|H3DDP9_TETNG
Uncharacterized protein OS=Tetraodon nigroviridis
GN=L,42.86,4e-19,GTP-BINDING PROTEIN-RELATED,NULL;
seg,NULL,CUFF.3647.1
         (211 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08410.1 | Symbols:  | P-loop containing nucleoside triphosph...   224   3e-59
AT2G27200.1 | Symbols:  | P-loop containing nucleoside triphosph...   196   7e-51

>AT1G08410.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:2646307-2649106
           FORWARD LENGTH=589
          Length = 589

 Score =  224 bits (571), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/228 (55%), Positives = 149/228 (65%), Gaps = 31/228 (13%)

Query: 1   MIACGVLPIDRMTEHREAVQVVADRVPRHVIEGVYKITLPKPKSYESQSLPPLASELLRV 60
           MIA GVLPIDRMTEHREA+QVVAD+VPR VIE VY I+LPKPK+YE QS PP A+ELL+ 
Sbjct: 375 MIASGVLPIDRMTEHREAIQVVADKVPRRVIESVYNISLPKPKTYERQSRPPHAAELLKS 434

Query: 61  YCASRGYVASSGLPDETKAARQILKDYIDGKVPHYEMPPGV-SSEEQALEDPTGXXXXXX 119
           YCASRGYVASSGLPDETKAAR ILKDYI GK+PHY MPPG+  ++E  +ED         
Sbjct: 435 YCASRGYVASSGLPDETKAARLILKDYIGGKLPHYAMPPGMPQADEPDIED--------- 485

Query: 120 XXXXXXGIEDSLDG------------ESEQAPNLEHVLDDLKSFDLANGI-ASQKVTXXX 166
                  +ED L+G            E+EQ P ++ VLDDL SFDLANG+ +S+KVT   
Sbjct: 486 ----TQELEDILEGSESDDSAVGDETENEQVPGIDDVLDDLSSFDLANGLKSSKKVTAKK 541

Query: 167 XXXXXXXXXX-XXXXXXSWRAGN--DGTDGTPIARFFQKPANTGPVKV 211
                            +WR  N  DG DG P  + FQKPANTGP+ +
Sbjct: 542 QTASHKQHKKPQRKKDRTWRVQNTEDG-DGMPSVKVFQKPANTGPLTM 588


>AT2G27200.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:11625449-11627959
           FORWARD LENGTH=537
          Length = 537

 Score =  196 bits (499), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 100/164 (60%), Positives = 117/164 (71%), Gaps = 9/164 (5%)

Query: 1   MIACGVLPIDRMTEHREAVQVVADRVPRHVIEGVYKITLPKPKSYESQSLPPLASELLRV 60
           M+A GVLPIDRMTEH EA++VVA+ VPRH IE VY I+LPKPKSYE QS PPLASELLR 
Sbjct: 371 MVASGVLPIDRMTEHLEAIKVVAELVPRHAIEDVYNISLPKPKSYEPQSRPPLASELLRT 430

Query: 61  YCASRGYVASSGLPDETKAARQILKDYIDGKVPHYEMPPGVS--SEEQALEDPTGXXXXX 118
           YC SRGYVASSGLPDET+AARQILKDYI+GK+PH+ MPP ++   E +  +D  G     
Sbjct: 431 YCLSRGYVASSGLPDETRAARQILKDYIEGKLPHFAMPPEITRDDENETADDTLG----- 485

Query: 119 XXXXXXXGIEDSLDGESEQAPNLEHVLDDLKSFDLANGIASQKV 162
                  G +    GE   +  L+ VLDDL SFDLANG+ S K 
Sbjct: 486 --AETREGSQTEKKGEEAPSLGLDQVLDDLSSFDLANGLVSSKT 527