Miyakogusa Predicted Gene
- Lj0g3v0072269.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0072269.1 Non Chatacterized Hit- tr|E1Z888|E1Z888_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,27.46,0.000000000000001,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; OS02G0126500 PROTEIN,NULL; FAMILY NOT
,CUFF.3568.1
(294 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 2e-90
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 74 2e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 3e-12
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 8e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 67 2e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 66 3e-11
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 65 5e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 6e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 9e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 64 9e-11
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 64 1e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 63 3e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 62 3e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 7e-10
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 8e-10
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 60 1e-09
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 60 1e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 60 2e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 60 2e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 60 2e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 3e-09
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 59 3e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 58 6e-09
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 6e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 58 7e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 57 1e-08
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 57 1e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 57 2e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 56 4e-08
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 6e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 9e-08
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 9e-08
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 54 1e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 52 4e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 52 6e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 6e-07
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 8e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 3e-06
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 49 3e-06
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 4e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 49 5e-06
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 48 6e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
>AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16983638-16986681 FORWARD
LENGTH=444
Length = 444
Score = 328 bits (842), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 210/295 (71%), Gaps = 9/295 (3%)
Query: 1 MKFL-QSLIGNARTRFAAXXXXXXXXXXXXFFCAPSEEYYKRNYANNVSEYNTVFGSLTA 59
MKFL QS+ G R+ A +F + EE KRNYAN++SEYNT S+TA
Sbjct: 1 MKFLMQSISGRNRSLVRALVSRR-------YFASSPEEIAKRNYANDLSEYNTAVNSVTA 53
Query: 60 QRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTL 119
QRR++LLRD YDDM LDGV+P D FHS VVGTM+G+R+ DAF+F +MK MG+ PDV L
Sbjct: 54 QRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNL 113
Query: 120 YNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMT 179
YNFLISTCGK KN +AI++ +EMK +VKPN +T++CLL+ACA G+LD V AIVRDMT
Sbjct: 114 YNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMT 173
Query: 180 AAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVEANSANAENVMMGVS 239
AAG+GLN+FCYAGLI AH NK P D+ + K++EFVE+SK WS+++++ +AE+VM +S
Sbjct: 174 AAGVGLNQFCYAGLITAHLNKQPRPDNLSTKILEFVEQSKGWSAIDSSRKSAEDVMFSIS 233
Query: 240 DEELYNLPTAEYVHRRGGFLVRPXXXXXXXXXXXXDVKNVELVGTLLEMLNKEGK 294
+EELYN+PTA+Y H R FL R D+K+V+ LLEML K+GK
Sbjct: 234 EEELYNIPTADYSH-RTRFLQRNLTVYHVAFSALADLKDVKATEALLEMLKKDGK 287
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ YN + S+ +R + + Y D++ +G PN T+ +LV R DA
Sbjct: 314 NLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIY 373
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEV-KPNVRTYICLLHACAA 164
+MK GL V LYN L+S C ++ D+A +I ++MK E P+ T+ L+ A
Sbjct: 374 REMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYAC 433
Query: 165 DGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD 205
GR+ A + M AG F +I + V D
Sbjct: 434 SGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 4/167 (2%)
Query: 35 SEEYYKRNYANNVSEYNTVFGSL-TAQRRNFLLRDA---YDDMMLDGVKPNRDTFHSLVV 90
SE+ + + N F ++ + R+N + + A ++ M G +P+ T +++
Sbjct: 194 SEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMID 253
Query: 91 GTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKP 150
R + A ++ + D ++ LI G S N D + I EEMK + VKP
Sbjct: 254 AYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKP 313
Query: 151 NVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
N+ Y L+ + R + I +D+ G N YA L+ A+
Sbjct: 314 NLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 360
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 50 YNTVFGSLTAQRRNFLLRDAY---DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLN 106
YNT+ +++ L +A+ D+M+ G+KP+ T+ L+ G +++++A F +
Sbjct: 543 YNTLISGCCGKKK---LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 107 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 166
K G++PDV Y+ +I C K++ +++ + +EM V+PN Y L+ A G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 167 RLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
RL + DM G+ N Y LI
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLI 687
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E +N N YN + + R + + +DM G+ PN T+ SL+ G
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
SR+++A +M++ GL P+V Y LI GK + +L EM V PN TY
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDF 207
++ A DG + + ++ +M G+ + Y I + + V + F
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 44 ANNVSEYNTVFGSLTAQRR---NFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
A NV +NTV L R F+ ++ M+ G++P T+ LV G R R+ D
Sbjct: 292 APNVVTFNTVIDGLGMCGRYDEAFMFKE---KMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
A++ L +M G P+V +YN LI + ++ + ++AI+I + M + TY L+
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+G+ D ++++M + G +N+ + +I
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+DD +G+ P+ T+ ++ G + R ++ F ++M + P+ +YN LI +
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
S A+++ E+MK + PN TY L+ + R++ + +M GL N F
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 190 YAGLI 194
Y LI
Sbjct: 718 YTALI 722
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V Y+ + R ++ +D+MM V+PN ++ L+ R R+ A
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
MK G+ P+ Y LI ++A + EEM+ ++PNV Y L+
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD 205
G++ +V ++R+M + + NK Y +I + VT+
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+ M GV PN TF++++ G R +AF F +M G+ P + Y+ L+ +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+K A +L+EM PNV Y L+ + G L++ I M + GL L
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 190 YAGLIVAH 197
Y LI +
Sbjct: 403 YNTLIKGY 410
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G +R ++++L+ G ++ +AF FL++M GL PD Y+ LI ++A
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
IQ ++ K + P+V TY ++ C R + +M + + N Y LI A
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 197 HKNKTPVTDDFAAKVIEFVERSKIWSSVEANSANAENVMMGVS 239
+ ++ +E E K + NSA +++ G+S
Sbjct: 655 YCRSGRLS-----MALELREDMK-HKGISPNSATYTSLIKGMS 691
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
D++ GV P+ F + + +G ++++A ++M+ G+ P+V +N +I G
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
D+A E+M ++P + TY L+ R+ ++++MT G N Y
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 192 GLI 194
LI
Sbjct: 370 NLI 372
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 50 YNTVFGSLTAQRRNFLLRDAY---DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLN 106
YNT+ +++ L +A+ D+M+ G+KP+ T+ L+ G +++++A F +
Sbjct: 543 YNTLISGCCGKKK---LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 107 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 166
K G++PDV Y+ +I C K++ +++ + +EM V+PN Y L+ A G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 167 RLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
RL + DM G+ N Y LI
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLI 687
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E +N N YN + + R + + +DM G+ PN T+ SL+ G
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
SR+++A +M++ GL P+V Y LI GK + +L EM V PN TY
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDF 207
++ A DG + + ++ +M G+ + Y I + + V + F
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 44 ANNVSEYNTVFGSLTAQRR---NFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
A NV +NTV L R F+ ++ M+ G++P T+ LV G R R+ D
Sbjct: 292 APNVVTFNTVIDGLGMCGRYDEAFMFKE---KMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
A++ L +M G P+V +YN LI + ++ + ++AI+I + M + TY L+
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+G+ D ++++M + G +N+ + +I
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+DD +G+ P+ T+ ++ G + R ++ F ++M + P+ +YN LI +
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
S A+++ E+MK + PN TY L+ + R++ + +M GL N F
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 190 YAGLI 194
Y LI
Sbjct: 718 YTALI 722
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V Y+ + R ++ +D+MM V+PN ++ L+ R R+ A
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
MK G+ P+ Y LI ++A + EEM+ ++PNV Y L+
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD 205
G++ +V ++R+M + + NK Y +I + VT+
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+ M GV PN TF++++ G R +AF F +M G+ P + Y+ L+ +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+K A +L+EM PNV Y L+ + G L++ I M + GL L
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 190 YAGLIVAH 197
Y LI +
Sbjct: 403 YNTLIKGY 410
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G +R ++++L+ G ++ +AF FL++M GL PD Y+ LI ++A
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
IQ ++ K + P+V TY ++ C R + +M + + N Y LI A
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 197 HKNKTPVTDDFAAKVIEFVERSKIWSSVEANSANAENVMMGVS 239
+ ++ +E E K + NSA +++ G+S
Sbjct: 655 YCRSGRLS-----MALELREDMK-HKGISPNSATYTSLIKGMS 691
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
D++ GV P+ F + + +G ++++A ++M+ G+ P+V +N +I G
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
D+A E+M ++P + TY L+ R+ ++++MT G N Y
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 192 GLI 194
LI
Sbjct: 370 NLI 372
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 78/148 (52%)
Query: 47 VSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLN 106
+ YN++F + + R + + ++ M+ +GV+P R T++ ++ G R++ A F
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFE 279
Query: 107 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 166
MK G+ PD +N +I+ + K D+A ++ EMK ++ P+V +Y ++ A
Sbjct: 280 DMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
Query: 167 RLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
R+D I +M ++G+ N Y+ L+
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLL 367
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
+ M DG+ P+ T+++L+ RGS Q+A +MK G D YN L+ GKS
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
+A+++L EM P++ TY L+ A A DG LD + M G + F Y
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 191 AGLI 194
L+
Sbjct: 388 TTLL 391
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 44 ANNVSEYNTVFGSLTAQRRNFLLRDA---YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
A + YNT+ +T +R L ++A +++M G ++ T+++L+ + R ++
Sbjct: 276 APDAYTYNTL---ITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
A LN+M + G P + YN LIS + D+A+++ +M KP+V TY LL
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD 205
G+++ +I +M AG N + I + N+ T+
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
++ +NT+ + + + +M G P R+TF++L+ R + A
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M G+ PD++ YN +++ + +Q+ ++L EM+ KPN TY LLHA A
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 166 GRLDRVNAIVRDM 178
+ ++++ ++
Sbjct: 573 KEIGLMHSLAEEV 585
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE ++ + YN + R ++M+L+G P+ T++SL+ R
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+ +A NQM G PDV Y L+S ++ + A+ I EEM+ KPN+ T+
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ G+ + I ++ GL + + L+
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYD---DMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
++ ++ YN++ ++A R+ +L +A + M G KP+ T+ +L+ G R +++
Sbjct: 345 FSPSIVTYNSL---ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
A +M+ G P++ +N I G + ++I +E+ + P++ T+ LL
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+G V+ + ++M AG + + LI A+
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
+++ G+KP+ ++++++ R +RM+DA ++M+ G+VPDV YN I +
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 178
++AI ++ M +PN TY ++ R D V D+
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 3/157 (1%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSL--VVGTMRGSRMQD 100
++ +V Y ++ + R + + M DG KP T++ + V G M G+
Sbjct: 204 FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKM-GTPWNK 262
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
+ +MK G+ PD YN LI+ C + +A Q+ EEMK + TY LL
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
R ++ +M G + Y LI A+
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D++ + G+ P+ T+++L+ + + +MK G VP+ +N LIS +
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+ +QA+ + M V P++ TY +L A A G ++ ++ +M N+
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 190 YAGLIVAHKN 199
Y L+ A+ N
Sbjct: 562 YCSLLHAYAN 571
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLD-GVKPNRDTFHSLVVGTMRG 95
E +R ++ +++ N++ S+ +R+ + D M + G P+ T++SL+ R
Sbjct: 619 ELKERGFSPDITTLNSMV-SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+ + L ++ G+ PD+ YN +I ++ A +I EM+ + P+V TY
Sbjct: 678 ADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITY 737
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ + AAD + +VR M G N+ Y ++
Sbjct: 738 NTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSR--MQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
+++M G KPN TF++ + M G+R + +++ + GL PD+ +N L++
Sbjct: 407 FEEMRNAGCKPNICTFNAFI--KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
G++ + + +EMK P T+ L+ A + G ++ + R M AG+ +
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 188 FCYAGLIVA 196
Y ++ A
Sbjct: 525 STYNTVLAA 533
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 45 NNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYF 104
+NV+ YNT+ +++ + R L++ DM +G+ PNR T+++LV G + +++AF
Sbjct: 239 DNVT-YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 105 LNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAA 164
+ MK ++PD+ YN LI+ + + + +++++ MK ++++P+V TY L+ C
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 165 DGRLDRVNAIVRDMTAAGLGLNKFCY 190
G ++ M G+ N+ +
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTH 383
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E K VS +N++ G L + L + +D++ G+ P+ TF+S+++G +
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R++ AF F N+ PD N L++ K +++A+ + E + + TY
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTY 628
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI--VAHKNKTPVTDDFAAK 210
++ A D +L ++ +M GL ++F Y I + K TD+ K
Sbjct: 629 NTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G +P+ TF SL+ G RG R+ DA Y +QM MG P+V +YN +I KSK D A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+ +L M+ + P+V TY L+ + GR +V MT + + F + LI A
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 197 HKNKTPVTD 205
+ V++
Sbjct: 266 CVKEGRVSE 274
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
Y NV YNT+ L ++ D + M DG+ P+ T++SL+ G R DA
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
++ M + PDV +N LI C K +A + EEM + P++ TY L++
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
RLD + M + G + Y+ LI
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D M+ G KPN +++++ G + ++ +A LN+M+ G+ PDV YN LIS
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
S A +++ M E+ P+V T+ L+ AC +GR+ +M L +
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 190 YAGLI 194
Y+ LI
Sbjct: 294 YSLLI 298
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
KR +V +N + + + R + Y++M+ + P+ T+ L+ G SR+
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A M G PDV Y+ LI+ KSK + +++ EM V N TY L+
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G+L+ I R M G+ N Y L+
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE +R+ ++ Y+ + L R + + M+ G P+ T+ L+ G +
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+++ +M G+V + Y LI ++ + A +I M F V PN+ TY
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDF 207
LLH +G++++ I+ DM G+ + Y +I V D +
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D+MM DG++P + T+ SL+ R ++ ++A ++ G+ PD+ + N L+
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
N D+A +L+EM M + P+ TY CL+ +G+ + ++ +M G+ +
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 190 YAGLIVAHKNKTPVTDDFAAK 210
Y LI + K F +
Sbjct: 540 YNTLISGYSKKGDTKHAFMVR 560
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVG-TMRG 95
+ Y+ +NV +N + L + + + M + G+KP T+++LV G ++RG
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLIS-TCGKSKNSDQAIQILEEMKFMEVKPNVRT 154
R++ A +++MK G PD+ YN ++S C N +A ++L EMK + + P+ +
Sbjct: 275 -RIEGARLIISEMKSKGFQPDMQTYNPILSWMC----NEGRASEVLREMKEIGLVPDSVS 329
Query: 155 YICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
Y L+ C+ +G L+ A +M G+ + Y LI
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+ YNT+ + + R R +M G +P+ T++ ++ R + L
Sbjct: 259 TIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV---L 315
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+MK +GLVPD YN LI C + + + A +EM + P TY L+H +
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+++ ++R++ G+ L+ Y LI
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILI 404
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
DMM + P+ T++ L+ G + ++A + +MK G+ PD YN LIS K
Sbjct: 494 DMM--SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
++ A + +EM + P + TY LL + + + ++R+M + G+ N +
Sbjct: 552 DTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFC 611
Query: 192 GLIVAHKN 199
+I A N
Sbjct: 612 SVIEAMSN 619
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 56/112 (50%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN + L + + R+ +M G+KP+ ++++L+ G + + AF ++M
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHA 161
+G P + YN L+ K++ + A ++L EMK + PN ++ ++ A
Sbjct: 565 SLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
Y DM +K N TF+ ++ + +++ A FL M++ G+ P + YN L+
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+ A I+ EMK +P+++TY +L +G R + ++R+M GL +
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVS 329
Query: 190 YAGLIVAHKNKTPVTDDFAAK 210
Y LI N + FA +
Sbjct: 330 YNILIRGCSNNGDLEMAFAYR 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 5/178 (2%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E + + ++ YN + + + R + +M G+ P+ +++ L+ G
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGRA---SEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
++ AF + ++M G+VP YN LI + A ++ E++ + + TY
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI--VAHKNKTPVTDDFAAKVI 212
L++ G + A+ +M G+ +F Y LI + KNKT D+ KV+
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%)
Query: 51 NTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKI 110
N + + +L MM G +P+ TF SL+ G G+RM++A +NQM
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 111 MGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 170
MG+ PDV +Y +I + K+ + + A+ + ++M+ ++P+V Y L++ GR
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 171 VNAIVRDMTAAGLGLNKFCYAGLIVA 196
++++R MT + + + LI A
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDA 256
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V Y T+ SL +D M G++P+ + SLV G R +DA L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
M + PDV +N LI K A ++ EM M + PN+ TY L++ +
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G +D + M G + Y LI
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E + + A N+ Y ++ + R + M G P+ + SL+ G +
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK 331
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
++ DA +M GL + Y LI G+ + A ++ M V PN+RTY
Sbjct: 332 KVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYN 391
Query: 157 CLLHACAADGRLDRVNAIVRDM 178
LLH +G++ + I DM
Sbjct: 392 VLLHCLCYNGKVKKALMIFEDM 413
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 13/192 (6%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
KR +V +N + + + + + Y++M+ + PN T+ SL+ G +
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A M+ G PDV Y LI+ K K D A++I EM + N TY L+
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 160 HACAADGRLDRVNAIVRDMTAAGLG---------LNKFCYAGLIVAHKNKTPVTDDFAAK 210
G+ + + M + G+ L+ CY G + K + +D +
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV---KKALMIFEDMQKR 416
Query: 211 VIEFVERSKIWS 222
++ V IW+
Sbjct: 417 EMDGVA-PNIWT 427
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 70/173 (40%), Gaps = 9/173 (5%)
Query: 31 FCAPSEEYY---------KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPN 81
FC S+ Y K + ++ + ++ R + M+ G+KP+
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 82 RDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILE 141
+ +++ + + A +QM+ G+ PDV +Y L++ S A +L
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 142 EMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
M ++KP+V T+ L+ A +G+ + +M + N F Y LI
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E + R+ +V Y + + +M G++P+ TF L+ G +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
M+DAF N M G P+V Y LI K + D A ++L EM + ++PN+ TY
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+++ G ++ +V + AAGL + Y L+ A+
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 66 LRDAY---DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNF 122
++DA+ + M+ G PN T+ +L+ G + + A L++M +GL P++ YN
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 123 LISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 182
+++ KS N ++A++++ E + + + TY L+ A G +D+ I+++M G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 183 LG---------LNKFCYAGLI 194
L +N FC G++
Sbjct: 557 LQPTIVTFNVLMNGFCLHGML 577
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y T+ L + + +M G++PN T++S+V G + +++A +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ + GL D Y L+ KS D+A +IL+EM ++P + T+ L++
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G L+ ++ M A G+ N + L+
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 44 ANNVSEYNTVFGSLTAQ---RRNFLLRDA-YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
A ++ T F SL Q R N A Y DM GV P+ T+ +LV G + M+
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK 144
+A++ +MK G V+ Y+ LI K K +A ++ ++M+
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E + R+ +V Y + + +M G++P+ TF L+ G +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
M+DAF N M G P+V Y LI K + D A ++L EM + ++PN+ TY
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+++ G ++ +V + AAGL + Y L+ A+
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 66 LRDAY---DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNF 122
++DA+ + M+ G PN T+ +L+ G + + A L++M +GL P++ YN
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 123 LISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 182
+++ KS N ++A++++ E + + + TY L+ A G +D+ I+++M G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 183 LG---------LNKFCYAGLI 194
L +N FC G++
Sbjct: 557 LQPTIVTFNVLMNGFCLHGML 577
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y T+ L + + +M G++PN T++S+V G + +++A +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ + GL D Y L+ KS D+A +IL+EM ++P + T+ L++
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G L+ ++ M A G+ N + L+
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 44 ANNVSEYNTVFGSLTAQ---RRNFLLRDA-YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
A ++ T F SL Q R N A Y DM GV P+ T+ +LV G + M+
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK 144
+A++ +MK G V+ Y+ LI K K +A ++ ++M+
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
V YN + + + R +++M G+ P+ T++S++ G + R+ D F
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+MK M PDV YN LI+ K ++ EMK +KPNV +Y L+ A +
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDF 207
G + + DM GL N++ Y LI A+ ++D F
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 66 LRDAY---DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNF 122
L DA+ ++M+ GV+ N T+ +L+ G RM++A +M G++P++ YN
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 123 LISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 182
LI K+KN D+A+++L E+K +KP++ Y + + +++ ++ +M G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 183 LGLNKFCYAGLIVAH-KNKTP 202
+ N Y L+ A+ K+ P
Sbjct: 538 IKANSLIYTTLMDAYFKSGNP 558
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+ DM+ G +P T++ ++ + ++ A +MK GLVPD YN +I GK
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
D + EEMK M +P+V TY L++ G+L R+M GL N
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 190 YAGLIVA 196
Y+ L+ A
Sbjct: 370 YSTLVDA 376
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
Y +M +G+KPN ++ +LV + MQ A F M+ +GLVP+ Y LI K
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
N A ++ EM + V+ NV TY L+ R+ + M AG+ N
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 190 YAGLI 194
Y LI
Sbjct: 475 YNALI 479
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 37 EYYKRNYAN----NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGT 92
E+Y+ N NV Y+T+ + + Y DM G+ PN T+ SL+
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
+ + DAF N+M +G+ +V Y LI ++ +A ++ +M V PN+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+Y L+H +DR ++ ++ G+ + Y I
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y + L R + + M GV PN ++++L+ G ++ M A L
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHA 161
N++K G+ PD+ LY I + + A ++ EMK +K N Y L+ A
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 6/176 (3%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYD---DMMLDGVKPNRDTFHSLVVGTM 93
E KRN + Y TV + + L AY+ +M+ G +PN + +L+ +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGD---LDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 94 RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVR 153
+ SR DA L +MK G+ PD+ YN LI K+K D+A L EM +KPN
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 154 TYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAA 209
TY + + V++M G+ NK GLI + K V + +A
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%)
Query: 69 AYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 128
AY M+ G+ + T+ L+ G + ++ DA +M+ G+ PDV Y LI+
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 129 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 188
K N +A I +EM + PNV Y LL G +++ ++ +M+ GL N
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 189 CYAGLIVAHKNKTPVTDDF 207
Y +I + + + F
Sbjct: 699 TYCTIIDGYCKSGDLAEAF 717
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D M+ G+ P + SL+ G R ++ + L +MK +V Y ++
Sbjct: 370 FDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
S + D A I++EM +PNV Y L+ + R ++++M G+ + FC
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 190 YAGLIVAHKNKTPVTDDFAAKVIEFVE 216
Y LI+ +K D+ + ++E VE
Sbjct: 490 YNSLIIGL-SKAKRMDEARSFLVEMVE 515
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST 126
+ + +M G+ P+ ++ L+ G + MQ A ++M GL P+V +YN L+
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 186
+S ++A ++L+EM + PN TY ++ G L + +M GL +
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 187 KFCYAGLI 194
F Y L+
Sbjct: 732 SFVYTTLV 739
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E + NV YN + G ++ D+M + G+ PN T+ +++ G +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 140
+ +AF ++MK+ GLVPD +Y L+ C + + ++AI I
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E ++ A ++ YN++ L+ +R R +M+ +G+KPN T+ + + G +
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
S A ++ +M+ G++P+ L LI+ K +A M + + +TY
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L++ + ++D I R+M G+ + F Y LI
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D+M+ +G+ PN ++ L+ G R ++ A L++M + GL P+ Y +I K
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 182
S + +A ++ +EMK + P+ Y L+ C R+N + R +T G
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC------RLNDVERAITIFG 756
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
+ M+ G+ P + T+ L+ G + R++DA L +M +G+ D Y+ LI K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
+N+D A ++ EM + Y C + + +G +++ A+ M A+GL Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 191 AGLIVAH 197
A LI +
Sbjct: 386 ASLIEGY 392
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
+M + N ++ L+ G R + +A + QMK G+ PD+ Y IS C K+
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
+ ++A Q +EEM+ + VKPN++TY L+ A ++ + +M A G+ +K Y
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 192 GLIVAHKNKTPVTDDF 207
L+ + ++ + + +
Sbjct: 839 CLLTSLLSRASIAEAY 854
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 33 APSEEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGT 92
A ++E RN N YN + + + D M +GVKP+ T+ S +
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
+ M A + +M+ +G+ P++ Y LI ++ ++A+ EEMK M +KP+
Sbjct: 775 SKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDK 834
Query: 153 RTYICLLHACAADGRLDR------VNAIVRDMTAAGL 183
Y CLL + + + V I ++M AGL
Sbjct: 835 AVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGL 871
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSK 131
M +GVK N T+ ++ G ++ +AF M G+ PDV LYN +IS CG
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG- 568
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
N D+AIQ ++EM+ + +P RT++ ++H A G + R + M G +
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 192 GLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVEANSANAENVMMG 237
GLI K + K +E ++ + + V AN +M G
Sbjct: 629 GLINGLVEKRQM-----EKAVEILDEMTL-AGVSANEHTYTKIMQG 668
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%)
Query: 84 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 143
T+ +L+ + RMQ A +M + + +YN LI + + +A ++++M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 144 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
K VKP++ TY + AC+ G ++R + +M A G+ N Y LI
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
+ +D M G P TF+ L+ G + +M+ A L++M + G+ + Y ++
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
++ +A + ++ + ++ TY LL AC GR+ A+ ++M+A + N
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 188 FCYAGLI 194
F Y LI
Sbjct: 730 FVYNILI 736
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 79 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 138
+P TF ++ G + M+ + + M+ G VP V +N LI+ + + ++A++
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 139 ILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
IL+EM V N TY ++ A+ G + + GL ++ F Y L+ A
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQ 135
G++P+ F +L+ G +M DA+ +N M+ G P+V Y LI C K D+
Sbjct: 266 GLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDE 325
Query: 136 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIV 195
A+++ EM+ + ++ TY L+ G +D+ +++ DM G+ ++ Y ++V
Sbjct: 326 AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMV 385
Query: 196 AHKNKTP------------------------VTDDFAAKVIEFVERSKIWSSVEAN 227
AH+ K V A K+ E E ++W+ +EAN
Sbjct: 386 AHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 42 NYANNVSEYNTVFGSLT-AQRRNFLLRDA---YDDMMLDGVKPNRDTFHSLVVGTMRGSR 97
Y EY VFG L A +N +++A ++DM + PN F SL+ G R +
Sbjct: 195 KYGLEPDEY--VFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGK 251
Query: 98 MQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYIC 157
+ +A L QMK GL PD+ ++ L+S + A ++ +M+ +PNV Y
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 158 LLHA-CAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L+ A C + R+D + +M G + Y LI
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 57/113 (50%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
DDM GV P++ T+ ++V + + ++ + +MK G PD+ +YN +I K
Sbjct: 366 DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKL 425
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 183
+A+++ EM+ + P V T++ +++ + G L ++M + G+
Sbjct: 426 GEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%)
Query: 44 ANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
A +V YNT+ + + +D+M + GV N T+++L+ G + R++DA
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
++QM + G PD YN L++ + + +A I++ M +P++ TY L+
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
GR++ + ++R + G+ L Y +I
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+ Y +V YN+V L + D M+ PN T+++L+ + ++++
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A + G++PDV +N LI ++N A+++ EEM+ +P+ TY L+
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ + G+LD +++ M +G + Y LI
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V +N++ L R + + + +++M G +P+ T++ L+ ++ +A L
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
QM++ G V YN LI K+ + +A +I +EM+ V N TY L+
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIV 195
R++ ++ M G +K+ Y L+
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%)
Query: 76 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 135
DG P++ TF++LV G + ++ A ++ M G PDV YN +IS K +
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 136 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 183
A+++L++M + PN TY L+ + +++ + R +T+ G+
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN + SL ++ + + M L G + T+++L+ G + ++ ++A ++M+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
+ G+ + YN LI KS+ + A Q++++M KP+ TY LL G +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLI 194
+ IV+ MT+ G + Y LI
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 2/160 (1%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
++ R+ + N YNT+ +L + + + + G+ P+ TF+SL+ G
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STCGKSKNSDQAIQILEEMKFMEVKPNVRT 154
+ A +M+ G PD YN LI S C K K D+A+ +L++M+ +V T
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK-LDEALNMLKQMELSGCARSVIT 472
Query: 155 YICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
Y L+ + I +M G+ N Y LI
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 35 SEEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMR 94
S+E K+ N+ YNT+ L+ + D ++ G+KP+ T++SL+ G
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 95 GSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM-KFMEVKPNVR 153
+Q +MK G+ P + Y+ LIS C K + I++ E + M +KP++
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK-----EGIELTERLFGEMSLKPDLL 666
Query: 154 TYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
Y +LH A G +++ + + M +GL+K Y LI+
Sbjct: 667 VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAY---DDMMLDGVKPNRDTFHSLVVGTMRGSR 97
R + V YN + ++ + + DA+ +M+ G++ N T+++L+ G +
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGK---IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 98 MQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYIC 157
+ +A L ++ GL PDV YN LIS G + N + I + EEMK +KP ++TY
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 158 LLHACAADG 166
L+ C +G
Sbjct: 640 LISLCTKEG 648
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YNT+ + R + M G+KP+ ++ L+ M++A +N+MK
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
+ G+ P V YN LI G+ D+ IL+EM+ PNV +Y L++ +L
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDF 207
+ RDM G+ Y LI +K + D F
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M L GV P+ +T++ L+ G R F L +M+ G +P+V Y LI+ K
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
+A + +M+ V P VR Y L+ C + G+++ ++M G+ LN Y
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 193 LI 194
LI
Sbjct: 570 LI 571
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTA---QRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGT 92
+E R ++ YNT+ ++F +R+ M D ++P+ TF++L+ G
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER---MKADHIEPSLITFNTLLKGL 294
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
+ ++DA L +MK +G VPD ++ L ++ ++ A+ + E VK N
Sbjct: 295 FKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNA 354
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 200
T LL+A +G++++ I+ A GL N+ Y +I + K
Sbjct: 355 YTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
+ + +V YN + G + D +M +G PN ++ +L+ +GS++ +
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
A M+ G+ P V +YN LI C + A + +EM ++ N+ TY L+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ G+L ++ +++ GL + F Y LI +
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 64/126 (50%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
+ ++ M D + P+ ++ L+ G +G RM DA ++M L+P + YN LI
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
K+ N +++ ++ E MK ++P++ T+ LL G ++ ++++M G +
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 188 FCYAGL 193
F ++ L
Sbjct: 320 FTFSIL 325
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV YN++ L R+ + +D+M+ G+ P T+H+ + G ++ F L
Sbjct: 372 NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG---EEVFELL 428
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M+ MG P V Y LI + ++ D + + +EMK V P++ +YI ++H +
Sbjct: 429 AKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLN 488
Query: 166 GRLDRVNAIVRDMTAAGLGLNK 187
G+++ ++M G+ N+
Sbjct: 489 GKIEEAYGYYKEMKDKGMRPNE 510
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M+ GVKPN T ++L+ G ++G R+ DA++ N+M+ + PD T YN L+ +
Sbjct: 431 MLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGH 490
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
A Q+ +EM +P++ TY L+ GRL + +++ + A G+ ++ +
Sbjct: 491 LRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF-- 548
Query: 193 LIVAHK 198
LI+A K
Sbjct: 549 LILAKK 554
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 9/162 (5%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
KR +V YNT+ +L + + D + M GV P++ ++ ++ G +
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
A FL M L+P+V L+N +I G+ ++ A+ +L M VKPNV T L+
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Query: 160 HACAADGRLD---------RVNAIVRDMTAAGLGLNKFCYAG 192
H GRL R I D T L L C G
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLG 489
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D+M +GV+P+R TF+SL+ RG + A ++M + DV YN L+ K
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
D A +IL +M + PNV +Y ++ A GR D + +M G+ L++
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 190 YAGLI 194
Y L+
Sbjct: 447 YNTLL 451
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E R +V YNT+ ++ + L + M + + PN ++ +++ G +
Sbjct: 363 DEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKA 422
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R +A +M+ +G+ D YN L+S K S++A+ IL EM + +K +V TY
Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
LL G+ D V + +M + N Y+ LI
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y+TV R + + +M G+ +R ++++L+ + R ++A L
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M +G+ DV YN L+ GK D+ ++ EMK V PN+ TY L+ +
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
G I R+ +AGL + Y+ LI A
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V YN + G Q + ++ + +M + V PN T+ +L+ G +G ++A
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ K GL DV LY+ LI K+ A+ +++EM + PNV TY ++ A
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 166 GRLDR 170
+DR
Sbjct: 598 ATMDR 602
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 67/128 (52%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST 126
R+ +D+M ++ + ++++L+ +G +M AF L QM + ++P+V Y+ +I
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 186
K+ D+A+ + EM+++ + + +Y LL GR + I+R+M + G+ +
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 187 KFCYAGLI 194
Y L+
Sbjct: 479 VVTYNALL 486
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 85 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS-DQAIQILEEM 143
F +L+ R ++A N MK GL P++ YN +I CGK Q + +EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 144 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+ V+P+ T+ LL C+ G + + +MT + + F Y L+ A
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YNT+ T R+ D +M G+K + T+++L+ G + + + +MK
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
++P++ Y+ LI K +A++I E K ++ +V Y L+ A +G +
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+++ +MT G+ N Y +I A
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDA 593
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDA---YDDMMLDGVKPNRDTFHSLVVGT 92
E + A ++ + T+ L R L+RDA +++M VKPNR T++ ++ G
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLF---RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
M AF FL +M G+VPD Y LI + + +A ++ + + N
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI---VAHKNK 200
Y LLH +G+L+ ++ ++M G+ L+ CY LI + HK++
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRR-NFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
E + V Y ++ G ++ + N LR Y +M G+ P+ TF +L+ G R
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALR-LYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
++DA N+M + P+ YN +I + + +A + L+EM + P+ +Y
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L+H G+ V + LN+ CY GL+
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 41 RNYANNVSEYNT-VFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
++ +V Y T V+G Q L + D+M+ P+ SLV G + +++
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGL-EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A + ++ G+ P++ +YN LI + K + +A + + M + ++PN TY L+
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
G+LD + + +M GL L+ + Y LI H
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ YN + SL R+ +D M G++PN T+ L+ R ++ A FL
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M GL V YN LI+ K + A + EM +++P V TY L+ +
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G++++ + +MT G+ + + + L+
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%)
Query: 74 MLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS 133
+L G+ N T++ L+ G R R+++A + +M G+ PD Y +I+ + +
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 134 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 183
+AI++ M ++P+ Y L+H C G + + + +M GL
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R +V ++ + +L + + + Y DM+ G+ P T++S++ G + R+
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA L+ M PDV ++ LI+ K+K D ++I EM + N TY L+
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
H G LD ++ M ++G+ N + ++ + +K + FA ++E +++S+
Sbjct: 259 HGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFA--ILEDLQKSE 316
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YNT+ + Y M +GV+P++ T+++L+ G + R+++A +L M
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G PD Y L++ + S A+ +LEEM+ PN TY LLH +D
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 387
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVEANS 228
+ + M ++G+ L YA L+ + V + A +V ++ SK S A S
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAE--AYEVFDYAVDSKSLSDASAYS 444
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLD-GVKPNRDTFHSLVVGTMR 94
+E +++ + YN + L + ++ + D+M D VKP+ +F L+
Sbjct: 183 KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN 242
Query: 95 GSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEMKFMEVKPNVR 153
+++A Y ++++ G PD LYN ++ C SK S +A+ + ++MK V+P+
Sbjct: 243 SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS-EAVGVYKKMKEEGVEPDQI 301
Query: 154 TYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
TY L+ + GR++ ++ M AG + Y L+
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 65 LLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI 124
L++ Y M VKPN +TF + +R + A+ L +K L P+ ++YN ++
Sbjct: 446 LVQRIYSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIM 505
Query: 125 STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG 184
+ + K + A+++L+EMK +VKP+ T+ L++ C + + + ++M AG+
Sbjct: 506 AGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLINYCGEEATIAKY---YKEMKQAGVE 562
Query: 185 LNKFCYAGLIVAH 197
+NK Y L+ A+
Sbjct: 563 VNKHVYMSLVKAY 575
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
++ + Y N +NT+ L + D M+ G +P+ T+ +V G +
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
AF LN+M+ L P V +YN +I K K+ D A+ + +EM+ ++PNV TY
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
L+ GR + ++ DM + + F ++ LI A
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E +R N YN + L + ++ + +M+ DGV PN T+++L+ G +
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
+++ A ++ + P + YN +I K+ + + + VKP+V Y
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
++ G + +A+ ++M G N CY LI A
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E KR+ ++ Y+++ R + ++ M+ P+ T+++L+ G +
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+++ +M GLV + YN LI ++ + D A +I +EM V PN+ TY
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 156 ICLLHACAADGRLDR 170
LL +G+L++
Sbjct: 470 NTLLDGLCKNGKLEK 484
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
YD+M+ + P+ T+ SL+ G R+ +A M PDV YN LI K
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
K ++ +++ EM + N TY L+ G D I ++M + G+ N
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 190 YAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSV 224
Y L+ + A V E+++RSK+ ++
Sbjct: 469 YNTLLDGLCKNGKLEK--AMVVFEYLQRSKMEPTI 501
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 32 CAPSEEYYKRNYAN----NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHS 87
C ++E +K ++ N+ YNT+ L + ++ + ++P T++
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 88 LVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFME 147
++ G + +++D + + + G+ PDV YN +IS + + ++A + +EMK
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 148 VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG 184
PN Y L+ A DG + ++++M + G
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMR- 94
+E +R NV +N V +L + RD +DM + G PN ++++L+ G +
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 95 --GSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
+M A L +M + P++T +N LI K N ++++ +EM +VKPNV
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+Y L++ G++ ++ M +AG+ N Y LI
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E ++ NV YN++ L + D M+ GV+PN T+++L+ G +
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+++A +K G VP +YN LI K D + EEM+ + P+V TY
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGL 183
CL+ +G ++ + +T+ GL
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Query: 33 APSEEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGT 92
A EE + +V YN + L + +D + G+ P+ TFH L+ G
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGY 480
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM-KFMEVKPN 151
R + A L +M MGL P YN ++ K N A + +M K ++ N
Sbjct: 481 CRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMN 540
Query: 152 VRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
V +Y LL + G+L+ N ++ +M GL N+ Y
Sbjct: 541 VASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+ +M+ VKPN +++SL+ G G ++ +A ++M G+ P++ YN LI+ K
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+ +A+ + +K P R Y L+ A G++D A+ +M G+ +
Sbjct: 379 NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGT 438
Query: 190 YAGLIVA 196
Y LI
Sbjct: 439 YNCLIAG 445
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYD---DMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
Y ++ YN + SL +R + DA+D ++ G++PN T+ +LV G SR
Sbjct: 186 YKPDIVAYNAIIDSLCKTKR---VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA L+ M + P+V Y+ L+ K+ +A ++ EEM M + P++ TY L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ R+D N + M + G + Y LI
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 45 NNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYF 104
N++ +N V + L M+ G +P+R T SLV G R +R+ DA
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 105 LNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAA 164
+++M +G PD+ YN +I + K+K + A +E++ ++PNV TY L++
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 165 DGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
R ++ DM + N Y+ L+ A
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE + + ++ Y+++ L R +D M+ G + ++++L+ G +
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R++D +M GLV + YN LI ++ + D+A + +M F + P++ TY
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
LL +G L++ I DM + L+ Y +I
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIS-TCGK 129
D M+ G KP+ +++++ + R+ DAF F +++ G+ P+V Y L++ C
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
S+ SD A ++L +M ++ PNV TY LL A +G++ + +M + +
Sbjct: 239 SRWSDAA-RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 190 YAGLI 194
Y+ LI
Sbjct: 298 YSSLI 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 65/138 (47%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V YNT+ +R + +M G+ N T+++L+ G + + A F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+QM G+ PD+ YN L+ + ++A+ I E+M+ E+ ++ TY ++
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 166 GRLDRVNAIVRDMTAAGL 183
G+++ ++ ++ GL
Sbjct: 449 GKVEEAWSLFCSLSLKGL 466
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLR---DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
+V+ YN++ ++ +N +L +D+M+ G+ P+ ++++L+ + R +AF
Sbjct: 82 DVTTYNSL---ISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAF 138
Query: 103 YFLNQ-MKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHA 161
L++ + + GLVP + YN L+ KS ++D AI++ + +K VKP + TY L++
Sbjct: 139 KILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILING 197
Query: 162 CAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
R+ V+ ++R++ +G N Y ++
Sbjct: 198 LCKSRRVGSVDWMMRELKKSGYTPNAVTYTTML 230
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 71 DDMMLDGVK----PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST 126
+ +++DG++ P+ T+++L+ G R + +A+ +M+ G+ PDVT YN LIS
Sbjct: 33 ETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISG 92
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVR-DMTAAGL 183
K+ ++ +Q+ +EM + P++ +Y L+ GR I+ D+ AGL
Sbjct: 93 AAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGL 150
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%)
Query: 42 NYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDA 101
NY YN + SL ++ L+ Y M+ DG P+ T++ L+ R +M
Sbjct: 214 NYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRF 273
Query: 102 FYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHA 161
++M G PD YN L+ GK A+ L MK + + P+V Y L+
Sbjct: 274 DRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG 333
Query: 162 CAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ G L+ + +M AG + CY +I +
Sbjct: 334 LSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D+M DG P+ T++ L+ +G++ A LN MK +G+ P V Y LI +
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+ N + L+EM +P+V Y ++ G LD+ + R+MT G N F
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 190 YAGLI 194
Y +I
Sbjct: 397 YNSMI 401
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G+ P+ + +L+ G R ++ YFL++M G PDV Y +I+ S D+A
Sbjct: 319 GIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKA 378
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
++ EM PNV TY ++ G ++++M + G N Y+ L+
Sbjct: 379 KEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSY 438
Query: 197 HKNKTPVTDDFAAKVI 212
+ +++ A KVI
Sbjct: 439 LRKAGKLSE--ARKVI 452
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E +R + N+ YNT+ G L + + D M DG+ PN T+++L+ G
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
++ A +K GL P + YN L+S + ++ A ++++EM+ +KP+ TY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L+ A +++ + M GL + Y+ LI
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
+ Y+ M DGV PN T++ ++ + R +DAF ++M+ G+ ++ YN LI
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
+ ++A +++++MK + PN+ TY L+ G+L + ++ RD+ + GL +
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 188 FCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSS 223
Y L+ K + AAK+++ +E I S
Sbjct: 374 VTYNILVSGFCRKGDTSG--AAKMVKEMEERGIKPS 407
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
++ NV Y T+ + +D + +M G+ N T+ L+ G + + F
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF 253
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
+M+ G+ P++ YN +++ K + A Q+ +EM+ V N+ TY L+
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ +L+ N +V M + G+ N Y LI
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G PN + +L+ G + ++ A +M +GLV + Y LI+ K+ Q
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
++ E+M+ V PN+ TY C+++ DGR + +M G+ N Y LI
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G +P+ + +L+ G +M DA+ L M+ G P+ Y LI K ++A
Sbjct: 282 GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEA 341
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+++ EM+ E + +V TY L+ G++D+ ++ DM GL ++ Y ++VA
Sbjct: 342 MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 197 HKNK 200
H+ K
Sbjct: 402 HEKK 405
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 57/113 (50%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
DDM+ G+ P+ T+ ++V + ++ + +M+ + PD+ +YN +I K
Sbjct: 381 DDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKL 440
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 183
+A+++ EM+ + P V T++ +++ A+ G L + ++M GL
Sbjct: 441 GEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 47 VSEYNTVFGSLTAQRRNF-LLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
V YN V + +RN + + +M+ V PN T++ L+ G + A
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
++M+ G +P+V YN LI K + D ++L M ++PN+ +Y +++ +
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
GR+ V+ ++ +M G L++ Y LI
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%)
Query: 76 DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQ 135
+G P+ T+++L+ G +M+DA L MK GL PDV Y+ ++S +S + D+
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 136 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIV 195
A+++ EM +KP+ TY L+ R + +M GL ++F Y LI
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 196 AH 197
A+
Sbjct: 529 AY 530
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E +R Y+ + YNT+ + + +M+ G+ P+ T+ SL+ +
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
M A FL+QM++ GL P+ Y L+ + ++A ++L EM P+V TY
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L++ G+++ A++ DM GL + Y+ ++
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 6/152 (3%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYD---DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
NV YNT+ R+ + D + M L G++PN +++ ++ G R RM++
Sbjct: 239 NVVTYNTLIDGYCKLRK---IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVS 295
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
+ L +M G D YN LI K N QA+ + EM + P+V TY L+H+
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G ++R + M GL N+ Y L+
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D M + G+ PN T+ +LV G + M +A+ L +M G P V YN LI+ +
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
+ AI +LE+MK + P+V +Y +L +D + R+M G+ + Y
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 191 AGLI 194
+ LI
Sbjct: 489 SSLI 492
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ YN V L + R + +M G + T+++L+ G + A
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M GL P V Y LI + K+ N ++A++ L++M+ + PN RTY L+ +
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
G ++ ++R+M G + Y LI H
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y+++ QRR D Y++M+ G+ P+ T+ +L+ ++ A N+M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
G++PDV Y+ LI+ K + +A ++L ++ + E P+ TY L+ C+
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
+DM G+ P+ ++ +++ G R + +A +M G+ PD Y+ LI +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
+ + +A + EEM + + P+ TY L++A +G L++ + +M G+ + Y
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 191 AGLI 194
+ LI
Sbjct: 559 SVLI 562
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
E+ K + V YN + +L L Y+D DG+ TF LV G +
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+++ L +M+ PDV Y +I T N D ++++ +EM+ E+KP+V Y
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L+ DGR++R + +M + +++ Y LI
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLI 375
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V YNT+ SL + + D M+ P+ T+ L+ T R S + A L
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
++M+ G PDV YN L++ K D+AI+ L +M +PNV T+ +L + +
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 166 GRLDRVNAIVRDMTAAGLG---------LNKFCYAGLI 194
GR ++ DM G +N C GL+
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YNTV L + D+M +KP+ T+ SLV G R ++ +A F ++ +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
MG+ P+ +N ++ KS+ +D+AI L M KPN +Y L+ A +G
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 170 RVNAIVRDMTAAGL 183
++ ++ GL
Sbjct: 572 EALELLNELCNKGL 585
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 65/124 (52%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N YN + +++ + + M+ G P+ T+++++ + +++DA L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
NQ+ G P + YN +I K+ + +AI++L+EM+ ++KP+ TY L+ + +
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 166 GRLD 169
G++D
Sbjct: 498 GKVD 501
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLR--DAYDDMMLDGVKPNRDTFHSLVVGTMRGSR 97
++ ++ +V +N + L R+ L R D + M G +PN +++ L+ G + +
Sbjct: 337 RKGFSPSVVTFNILINFLC--RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 98 MQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYIC 157
M A +L +M G PD+ YN +++ K + A++IL ++ P + TY
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 158 LLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVER 217
++ A G+ + ++ +M A L + Y+ L+ + V D A K ER
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV--DEAIKFFHEFER 512
Query: 218 SKIWSSVEANSANAENVMMGV 238
I N+ ++M+G+
Sbjct: 513 MGI----RPNAVTFNSIMLGL 529
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV +N + S+ + R DM+ G P+ TF+ L+ R + A L
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M G P+ YN L+ K K D+AI+ LE M P++ TY +L A D
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 166 GRLDRVNAIVRDMTAAG 182
G+++ I+ +++ G
Sbjct: 428 GKVEDAVEILNQLSSKG 444
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 10/182 (5%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E R +V YN + + + R +DM G +PN T H++++ +M
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT-HNIILRSMCS 321
Query: 96 S-RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRT 154
+ R DA L M G P V +N LI+ + +AI ILE+M +PN +
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 155 YICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEF 214
Y LLH + ++DR + M + G CY ++ + T + D KV +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRG------CYPDIVTYNTMLTALCKD--GKVEDA 433
Query: 215 VE 216
VE
Sbjct: 434 VE 435
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%)
Query: 78 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 137
V P+ T+++++ +++ A L++M PDV Y LI + A+
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 138 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 186
++L+EM+ P+V TY L++ +GRLD + DM ++G N
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STCGK 129
D+M G P+ T++ LV G + R+ +A FLN M G P+V +N ++ S C
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+ D A ++L +M P+V T+ L++ G L R I+ M G N
Sbjct: 323 GRWMD-AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 190 YAGLIVAHKNKTPVTDDFAAKVIEFVER 217
Y L+ + + + IE++ER
Sbjct: 382 YNPLLHGFCKEKKMD-----RAIEYLER 404
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 6/162 (3%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYD---DMMLDGVKPNRDTFHSLVVGT 92
E R ++ YNT+ LTA ++ + DA + + G P T+++++ G
Sbjct: 403 ERMVSRGCYPDIVTYNTM---LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
+ + A L++M+ L PD Y+ L+ + D+AI+ E + M ++PN
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
T+ ++ + DR + M G N+ Y LI
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
++ +R + S ++++ S+ R Y +M G +P+ F SL+ +
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
++ A ++MK G P+ LY +I + KS + A+ + ++M+ P TY
Sbjct: 397 GKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVI 212
CLL A G++D I MT AGL Y L+ NK V D A K++
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLV--DVAGKIL 511
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
Query: 48 SEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQ 107
S Y + SL R + M ++P+ F SLV + R+ + +
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME 373
Query: 108 MKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 167
M+ G P T++ LI + K+ D A+++ +EMK +PN Y ++ + A G+
Sbjct: 374 MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 168 LDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKV 211
L+ + +DM AG Y+ L+ H V D A K+
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQV--DSAMKI 475
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
D +LDG T+ ++ + R+ AF QMK L P ++++ L+ + GK+
Sbjct: 308 DSLLDG-----STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAG 362
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
D ++++ EM+ +P+ ++ L+ + A G+LD + +M +G N Y
Sbjct: 363 RLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYT 422
Query: 192 GLIVAH 197
+I +H
Sbjct: 423 MIIESH 428
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D+M G +PN + ++ + +++ A M+ G +P + Y+ L+
Sbjct: 406 WDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG 465
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
S D A++I M ++P + +YI LL A +D I+ +M A G ++ C
Sbjct: 466 SGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD-VC 524
Query: 190 YAGLIVAHKNKTPVTDDFAAKVIEFVERSKI 220
+ +++ + V D A K + F+ S I
Sbjct: 525 ASDVLMIYIKDASV--DLALKWLRFMGSSGI 553
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 55 GSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLV 114
G++ A + FL +M G P+ T+ +L+ G R R+ +A +M
Sbjct: 171 GTVDAGLKIFL------EMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 115 PDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAI 174
P V Y LI+ SKN D+A++ LEEMK ++PNV TY L+ DGR + +
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 175 VRDMTAAGLGLNKFCYAGLIVA 196
M A G N Y LI
Sbjct: 285 FEMMMARGCRPNMVTYTTLITG 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE + NV Y+++ L R+ + ++ MM G +PN T+ +L+ G +
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEMKFMEVKPNVRT 154
++Q+A L++M + GL PD LY +IS C SK + A L+EM + PN T
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA-NFLDEMILGGITPNRLT 369
Query: 155 Y 155
+
Sbjct: 370 W 370
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E KR + Y T+ L R + + +M+ P T+ SL+ G
Sbjct: 182 EMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSK 241
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
+ +A +L +MK G+ P+V Y+ L+ K S QA+++ E M +PN+ TY
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L+ + ++ ++ M GL + Y +I
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 5/195 (2%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGT-MRG 95
E ++ + NV Y+T+ L + L M+ G PN T SLV G +RG
Sbjct: 271 EMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG 330
Query: 96 SRMQDAFYFLNQM-KIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRT 154
+ DA NQM + GL P+V YN L+ N +A+ + M+ + PN+RT
Sbjct: 331 TTF-DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 155 YICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEF 214
Y L++ A G LD I M +G N Y ++ A + + A +IE
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE--AESLIEI 447
Query: 215 VERSKIWSSVEANSA 229
+ + SV +A
Sbjct: 448 MSKENCAPSVPTFNA 462
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV YNT+ + + M G PN T+ SL+ G + + A Y
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
N+M G P+V +Y ++ + +A ++E M P+V T+ +
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 166 GRLDRVNAIVRDM 178
GRLD + R M
Sbjct: 471 GRLDWAEKVFRQM 483
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 76/195 (38%), Gaps = 41/195 (21%)
Query: 30 FFCAPSEEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLV 89
F C PS V YN V +L + R ++ Y DM DG +PN T++ L+
Sbjct: 140 FGCDPS-----------VKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLL 188
Query: 90 VGTMRGSRMQDAFYFLNQMKIMGLVPD------------------------------VTL 119
+ +++ A L +M G PD V++
Sbjct: 189 KALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSV 248
Query: 120 YNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMT 179
YN LI+ K + A +++ EM + PNV +Y L++ G+++ + + M
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 180 AAGLGLNKFCYAGLI 194
G N + + L+
Sbjct: 309 KRGCHPNIYTLSSLV 323
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
MM G++P+ T SLV G + ++DA Y QM+ MG+ DV + LI T K++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
A+++L+ MK + PNV TY L+ GRL + +M + + N ++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 193 LIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVEANSANAENVMMGV 238
LI A+ + ++ ++ V + I S++ N +++ G+
Sbjct: 124 LIDAYAKRGKLSK------VDSVYKMMIQMSIDPNVFTYSSLIYGL 163
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G+ PN T+ SL+ G + R+ DA L++M + P+V ++ LI K +
Sbjct: 78 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 137
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 193
+ + M M + PNV TY L++ R+D ++ M + G N Y+ L
Sbjct: 138 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 69 AYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STC 127
+++M L G + N + L+ G R+ +A +MK P V Y LI S C
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
G + S +A+ +++EM+ +KPN+ TY L+ + + + ++ ++ M GL N
Sbjct: 335 GSERKS-EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 188 FCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKI 220
Y LI + + + D A V+E +E K+
Sbjct: 394 ITYNALINGYCKRGMIED--AVDVVELMESRKL 424
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ Y + SL +Q + R+ M+ G+ PN T+++L+ G + ++DA +
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
M+ L P+ YN LI KS N +A+ +L +M +V P+V TY L+
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVE 225
G D ++ M GL +++ Y +I D K E ++ S+E
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMI-----------DSLCKSKRVEEACDLFDSLE 524
Query: 226 ANSANAENVM 235
N VM
Sbjct: 525 QKGVNPNVVM 534
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
+ M+ V P+ T++SL+ G R A+ L+ M GLVPD Y +I + KS
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
K ++A + + ++ V PNV Y L+ G++D + ++ M + N +
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 191 AGLI 194
LI
Sbjct: 571 NALI 574
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMML---DGVKPNRDTFHSLVVGTMRGS 96
+R +V YN++ + Q R+ AY + L G+ P++ T+ S++ +
Sbjct: 455 ERKVLPDVVTYNSL---IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
R+++A + ++ G+ P+V +Y LI K+ D+A +LE+M PN T+
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGL 183
L+H ADG+L + M GL
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGL 598
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 47 VSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLN 106
V Y + SL R + +M G+KPN T+ L+ + + A L
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 107 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
QM GL+P+V YN LI+ K + A+ ++E M+ ++ PN RTY
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G+ P+ T+ SL++G + + AF N+M + G + Y LI ++ D+A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ + +MK E P VRTY L+ + R +V++M G+ N Y LI
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y ++ SL +R D +D + GV PN + +L+ G + ++ +A L +M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
+P+ +N LI +A + E+M + ++P V T L+H DG D
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD--DFAAKVIE 213
+ + M ++G + Y I + + + D D AK+ E
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E ++ Y + YNT+ SL ++ Y +M+ D V PN T++ +V G +
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+++A +++++ GL PD Y LI + K+ D A ++ EM + N Y
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY 291
Query: 156 ICLLHACAADGRLD 169
L+H R+D
Sbjct: 292 THLIHGLCVARRID 305
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
+ M+ PN TF++L+ G ++++A +M +GL P V+ LI K
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
+ D A ++M KP+ TY + +GRL ++ M G+ + F Y
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 191 AGLI 194
+ LI
Sbjct: 676 SSLI 679
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 7/152 (4%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMML---DGVKPNRDTFHSLVVGTMRGSRMQDAF 102
NV YN + + ++ DA D + L + PN T++ L+ G + S + A
Sbjct: 392 NVITYNALINGYC---KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAM 447
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
LN+M ++PDV YN LI +S N D A ++L M + P+ TY ++ +
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
R++ + + G+ N Y LI
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M+ +GV+P+ T+ LV R+ + ++ ++K GL PDV YN +I+ GKS
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 133 SDQAIQILEEMKFME-VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
++A+ + EMK + P++ TY L+ G ++ I ++ AGL N F +
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 192 GLI 194
LI
Sbjct: 1072 ALI 1074
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
D D M G+ PN T+++L+ G +R R+ DA M+ +G+ P Y I
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
GKS +S A++ E+MK + PN+ L++ A GR I + GL +
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 188 FCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVEANSANAENVMMGVSDEELY 244
Y ++ + +KV E E K+ S + N + +++ LY
Sbjct: 504 VTYNMMMKCY-----------SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N YN + L R + Y M+L+G +P+ T+ SL+VG + + L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M+ +GL P+V + I G++ ++A +IL+ M P+V TY L+ A
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+LD + M ++ Y L+
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Query: 31 FCAPSEEYYKR----NYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFH 86
FC + E Y+R + ++ Y+++ L +R + +M G+KPN TF
Sbjct: 203 FCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFT 262
Query: 87 SLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFM 146
+ R ++ +A+ L +M G PDV Y LI ++ D A ++ E+MK
Sbjct: 263 ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322
Query: 147 EVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 182
KP+ TYI LL + + LD V +M G
Sbjct: 323 RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 44 ANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLD-GVKPNRDTFHSLVVGTMRGSRMQDAF 102
AN ++ + G + A + L D Y D+M D P T+ L+ G + R+ +A
Sbjct: 853 ANTITHNIVISGLVKAGNVDDAL-DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
M G P+ +YN LI+ GK+ +D A + + M V+P+++TY L+
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
GR+D +++ +GL + CY +I
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIM-GLVPDVTLYNFLISTCGKSKNSDQ 135
G+ P+ ++ ++ G + R+++A N+MK G+ PD+ YN LI G + ++
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 136 AIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 193
A +I E++ ++PNV T+ L+ + G+ + A+ + M G N Y L
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
E+ + A N+ N SL R+ + + + G+ P+ T++ ++ +
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+ +A L++M G PDV + N LI+T K+ D+A ++ MK M++KP V TY
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 193
LL +G++ + M G N + L
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 45 NNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYF 104
NNVS T+F T GV+P T++ L+ G + ++ A
Sbjct: 763 NNVSGARTLFEKFTKDL---------------GVQPKLPTYNLLIGGLLEADMIEIAQDV 807
Query: 105 LNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAA 164
Q+K G +PDV YNFL+ GKS D+ ++ +EM E + N T+ ++
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 165 DGRLD 169
G +D
Sbjct: 868 AGNVD 872
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
KR + + Y T+F SL+ + A M G N +++ L+ ++
Sbjct: 146 KRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCT 205
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A +M + G P + Y+ L+ GK ++ D + +L+EM+ + +KPNV T+ +
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
G+++ I++ M G G + Y LI A
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V Y + +L R+ ++ ++ M KP+R T+ +L+ + F
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
++M+ G VPDV + L+ K+ N +A L+ M+ + PN+ TY L+
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
RLD + +M + G+ + Y I
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFI 440
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y T+ + R ++ + +M DG P+ TF LV + +AF L+ M+
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR 390
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G++P++ YN LI + D A+++ M+ + VKP TYI + G D
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG--D 448
Query: 170 RVNAI 174
V+A+
Sbjct: 449 SVSAL 453
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
R+++ Y + L+ R + + ++ M+ G +PN ++ L+ G +
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
A +M G+ PD+ Y+ L+ D+ + +E+K + P+V Y +++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 161 ACAADGRLDRVNAIVRDM-TAAGLGLNKFCYAGLIV 195
RL+ + +M T+ G+ + + Y LI+
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 76/160 (47%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E R + N+ +NT + + + + +++ G KP+ TF ++ R
Sbjct: 450 EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
++DAF +M G+ P+ YN LI +C + ++D+++++ +MK + P++ Y
Sbjct: 510 EIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYN 569
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+ + ++ + +++ M GL + F Y+ LI A
Sbjct: 570 ATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKA 609
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 69/168 (41%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R Y + S +N L +D + GVKP + + LV + R
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFS 407
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+ +L QM + GL+ V YN +I K++ + A L EM+ + PN+ T+ L
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDF 207
+ G + +V+ ++ + G + ++ +I + D F
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAF 515
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
D + + G+KP+ +++++ ++ + + A+ QM+ G PD YN LI
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
K D+AI+++++M+ +PNV TY L+ GR+D
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVD 267
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN V +L L + M DG KP+R T++ L+ G + + +A + QM+
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQME 242
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPN---VRTYICLLHAC 162
G P+V Y LI + D+A++ LE M+ ++ PN +RT++ + C
Sbjct: 243 QEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRC 298
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
++ ++ + + +R+ + Y +M+ + P T++S++ G + R+ DA L
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ M G PDV ++ LI+ K+K D ++I EM + N TY L+H
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
G LD ++ +M + G+ + + ++ +K + FA ++E +++S+
Sbjct: 199 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFA--ILEDLQKSE 250
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLD-GVKPNRDTFHSLVVGTMRGSRMQDAFYF 104
+V +N++ L + R + D +D+M GV P+ TF++L+ G + S + +AF
Sbjct: 172 SVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRI 231
Query: 105 LNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM--KFMEVKPNVRTYICLLHAC 162
M++ PDV YN +I ++ A +L M K +V PNV +Y L+
Sbjct: 232 FKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGY 291
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+D + DM + GL N Y LI
Sbjct: 292 CMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V YN++ + L + DM G KPN ++ LV G + ++ +A+ L
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
N+M GL P+ +N LIS K +A++I EM KP+V T+ L+
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+ ++RDM + G+ N Y LI A
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 31 FCAPSE---------EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPN 81
FCA +E + K N Y T+ SL+ R ++M L G P+
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 82 RDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILE 141
+TF+ +++G + R+ +A +N+M I G PD Y +L++ K D A +
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----K 342
Query: 142 EMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM-TAAGLGLNKFCYAGLIVAH 197
++ + KP + + L+H GRLD A++ DM T+ G+ + Y LI +
Sbjct: 343 DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKI-MGLVPDVTLYNFLIST 126
DA D+ KP F++L+ G + R+ DA L+ M G+VPDV YN LI
Sbjct: 339 DAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 186
K A+++L +M+ KPNV +Y L+ G++D ++ +M+A GL N
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 187 KFCYAGLIVA 196
+ LI A
Sbjct: 459 TVGFNCLISA 468
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
++M DG+KPN F+ L+ + R+ +A +M G PDV +N LIS +
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
A+ +L +M V N TY L++A G + +V +M G L++ Y
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 191 AGLI 194
LI
Sbjct: 568 NSLI 571
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLD-GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQM 108
+NT+ R + DM+ G+ P+ T++SL+ G + + A L+ M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 109 KIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRL 168
+ G P+V Y L+ K D+A +L EM +KPN + CL+ A + R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 169 DRVNAIVRDMTAAGLGLNKFCYAGLI 194
I R+M G + + + LI
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLI 501
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
+M+L G P+ TF+SL+ G R R++D +++ G+ PD +N L+S K
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 170
A +L+E PN RT+ LL + LDR
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN V L + + + + + DM+ + P TF ++ + + A L M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY-ICLLHACAADGRL 168
G VP+ +Y LI + K ++A+Q+LEEM M P+ T+ +L C D R+
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD-RI 303
Query: 169 DRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ +V M G + Y L+
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLM 329
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N +N + + + R + + +M G KP+ TF+SL+ G ++ A + L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
M G+V + YN LI+ + +A +++ EM F + TY L+
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 166 GRLDRVNAIVRDMTAAG---------LGLNKFCYAGLI 194
G +D+ ++ M G + +N C +G++
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 39 YKRNYANNVSEYNTVFGSLT--AQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
Y ++ ++ YN++ L + ++ L+ +D++ + G +P+ T+ L+ G +
Sbjct: 281 YGSSFGPDICTYNSLIHVLCLFGKAKDALI--VWDELKVSGHEPDNSTYRILIQGCCKSY 338
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
RM DA +M+ G VPD +YN L+ K++ +A Q+ E+M V+ + TY
Sbjct: 339 RMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYN 398
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLN--KFCYAGLIVAHKNKTPVTDDFAAKVIEF 214
L+ +GR + + D+ G ++ F GL + + K + A K++E
Sbjct: 399 ILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKL----EGAVKLVEE 454
Query: 215 VE 216
+E
Sbjct: 455 ME 456
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN++ S + R D M + + T++ ++ G + R A L+++
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G D+ +YN LI+ GK+ D+A Q+ + MK + P+V +Y ++ + G+L
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 170 RVNAIVRDMTAAG 182
++ M AG
Sbjct: 753 EAYKYLKAMLDAG 765
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NVS + S + F +M+ G P+ T+ ++ S+M+ AF
Sbjct: 450 NVSSFTRCLCSAGKYEKAF---SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+MK GLV DV Y ++ + K+ +QA + EM+ + PNV TY L+HA
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
++ N + M + G N Y+ LI H
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 60/142 (42%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E + + + Y+++ +R L M+ + PN + ++ G +
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
+ +A+ + M+ G P+V Y +I G + +++LE M V PN TY
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 157 CLLHACAADGRLDRVNAIVRDM 178
L+ C +G LD + ++ +M
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEM 840
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 6/161 (3%)
Query: 50 YNTVFGSLTAQRRNF------LLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
YN + GS+ + + L AY +M+ GV N+ S + + AF
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
+ +M G +PD + Y+ +++ + + A + EEMK + +V TY ++ +
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVT 204
G +++ +M G N Y LI A+ V+
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M GV PN T+ +++ + + +A MK G VP+ YN ++S GK
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
S++ I++L +MK PN T+ +L C G VN + R+M + G ++ +
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 193 LIVAH 197
LI A+
Sbjct: 497 LISAY 501
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY-- 103
N YN V L + R+ + DM +G PNR T+++++ + G++ D F
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA--LCGNKGMDKFVNR 477
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
+MK G PD +N LIS G+ + A ++ EM V TY LL+A A
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
G ++ DM + G + Y+ ++ +
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCY 571
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 2/145 (1%)
Query: 53 VFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMG 112
VFG + R L D+M G+K + T +++ R +++A F ++K G
Sbjct: 254 VFGKMGRSWRKIL--GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCG 311
Query: 113 LVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVN 172
P YN L+ GK+ +A+ +L+EM+ + TY L+ A G
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 173 AIVRDMTAAGLGLNKFCYAGLIVAH 197
++ MT G+ N Y +I A+
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAY 396
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDA---YDDMMLDGVKPNRDTFHSLVVGTM 93
+ KR + NV ++ + S + + LR+A +MM G+ PN T++SL+ G
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGK---LREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 94 RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVR 153
+ +R+++A ++ M G PD+ +N LI+ K+ D +++ EM V N
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 154 TYICLLHACAADGRLDRVNAIVRDMTA 180
TY L+ G+L+ + ++M +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E +R A N YN++ + R D M+ G P+ TF+ L+ G +
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+R+ D +M + G++ + YN L+ +S + A ++ +EM V+P++ +Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD 205
LL +G L++ I + + + L+ Y +I N + V D
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 75 LDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSD 134
LD VK + ++ G + + +AF N+M+I G D+ YN LI + D
Sbjct: 261 LDAVK-----YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 135 QAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
++L +M ++ PNV T+ L+ + +G+L + ++++M G+ N Y LI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRR----NFLLRDAYDDMMLDGVKPNRDTFHSLVVGT 92
E + + ++ YNT+ G R LLRD M+ + PN TF L+
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD----MIKRKISPNVVTFSVLIDSF 343
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
++ ++++A L +M G+ P+ YN LI K ++AIQ+++ M P++
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
T+ L++ R+D + R+M+ G+ N Y L+
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 2/185 (1%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
K Y + +NT+ L + R + D M+ G KP T ++LV G ++
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA +++M G P+ Y +++ KS + A+++L +M+ +K + Y ++
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
DG LD + +M G + Y LI N D AK++ + + K
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD--GAKLLRDMIKRK 328
Query: 220 IWSSV 224
I +V
Sbjct: 329 ISPNV 333
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 44 ANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
+++ YN V L R + MM G +P+ T SL+ G +G+R+ DA
Sbjct: 101 GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
+++M+ MG PDV +YN +I K + A+++ + M+ V+ + TY L+
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
GR ++RDM + N + +I
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 5/162 (3%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE +R +V YN++ L R + D M+ G P+ T+++L+ G +
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+ + +M GLV D YN +I ++ D A +I M+ +PN+RTY
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR---MDSRPNIRTY 384
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
LL+ + R+++ + +M + + L+ Y IV H
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN--IVIH 424
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDA---YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+ +V YNT+ + + L+ DA +D M DGV+ + T++SLV G R
Sbjct: 170 FRPDVVIYNTI---IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA + M + +VP+V + +I K +A+++ EEM V P+V TY L+
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ GR+D ++ M G + Y LI
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN++ L R DM++ + PN TF +++ ++ + +A +M
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
+ PDV YN LI+ D+A Q+L+ M P+V TY L++ R+D
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ R+M GL + Y +I +
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGY 359
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D M+ G +PN T+ +V G + + AF LN+M+ + DV ++N +I + K
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
++ D A+ + +EM+ ++PNV TY L+ + GR + ++ DM + N +
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 258
Query: 191 AGLIVA 196
LI A
Sbjct: 259 NALIDA 264
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 73/159 (45%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
++ KR+ ++ YN++ R + ++ M+ P+ DT+++L+ G +
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R++D +M GLV D Y LI + D A ++ ++M V P++ TY
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
LL +G+L++ + M + + L+ + Y +I
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 76/175 (43%), Gaps = 2/175 (1%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ +N + + + + +DDM+ + P+ T++SL+ G R+ A
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
M PD+ YN LI KSK + ++ EM + + TY L+ D
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKI 220
G D + + M + G+ + Y+ L+ N + + A +V +++++S+I
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL--EKALEVFDYMQKSEI 426
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
E+ + ++N+ YN + + + L MM G +P+ T SL+ G G
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+ DA ++QM MG PD + LI + +A+ +++ M +PN+ TY
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGL 183
+++ G +D ++ M AA +
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
D + + L GVKPN T+++++ G +Q+A+ L +MK G +PD YN LI
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 170
+ + + +++ EM+ + T I L+ DGRLD+
Sbjct: 511 LRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLDK 552
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y T+ G+L ++ + D+M+ DG KPN T++ L+ R + +++A NQM+
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G PD Y LI K+ D A+ + + M+ + P+ TY +++ G L
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ + +M G N + +I H
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALH 509
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLV----VGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNF 122
R ++ M+ +G+KPN ++++L+ V M G+ A L +K G++PDV Y
Sbjct: 340 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT----ALSVLGDIKQNGIIPDVVSYTC 395
Query: 123 LISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 182
L+++ G+S+ +A ++ M+ KPNV TY L+ A ++G L I R M G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 183 LGLNKFCYAGLIVA-HKNKTPVTDD 206
+ N L+ A ++K V D
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVD 480
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M +GV P+ T + ++ G + A + MK + PD T +N +I K
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 133 SDQAIQILEEM--KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
S QA+ + M K E +P+V T+ ++H + G ++ A+ M A GL N Y
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 191 AGLIVAH 197
L+ A+
Sbjct: 359 NALMGAY 365
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N + YN+ GS Y M VK + TF L+ G+ R S+ +A +L
Sbjct: 494 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 553
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M+ + + +Y+ ++ K +A I +MK +P+V Y +LHA A
Sbjct: 554 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 613
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+ + + +M A G+ + + L+ A
Sbjct: 614 EKWGKACELFLEMEANGIEPDSIACSALMRA 644
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ YN + G+ + D+ +G+ P+ ++ L+ R + A
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
M+ P+V YN LI G + +A++I +M+ +KPNV + LL AC+
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFA 208
+ V+ ++ + G+ LN Y I ++ N + A
Sbjct: 474 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 516
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
MM G +P+ TF SL+ G +R++DA +Q+ MG P+V Y LI K+++
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
+ A+++ +M +PNV TY L+ GR ++RDM + N +
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 193 LIVA 196
LI A
Sbjct: 264 LIDA 267
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
+ NV Y T+ L R + ++ M +G +PN T+++LV G R DA
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
+ L M + P+V + LI K +A ++ M M V P+V TY L++
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G LD + M G N+ Y LI
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 6/155 (3%)
Query: 53 VFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMG 112
++G L R+ F L M +G PN + +L+ G + R++D +M G
Sbjct: 305 MYGLLDEARQMFYL------MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 113 LVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVN 172
+V + Y LI D A ++ +M P++RTY LL +G++++
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 173 AIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDF 207
I M + +N Y +I V D F
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D ++ G KPN T+ +L+ + + A NQM G P+V YN L++ +
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE 235
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
A +L +M ++PNV T+ L+ A G+L + M + + F
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 190 YAGLI 194
Y LI
Sbjct: 296 YGSLI 300
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D M+ +G++P+R T+++L+ + R A M+ G +P T YN +I++ G
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 526
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+ D ++L +MK + PNV T+ L+ GR + + +M + GL +
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 586
Query: 190 YAGLIVAHKNK 200
Y LI A+ +
Sbjct: 587 YNALINAYAQR 597
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
+NT+ R+ + + ++ M G P T++ ++ R D L +MK
Sbjct: 482 WNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMK 541
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G++P+V + L+ GKS + AI+ LEEMK + +KP+ Y L++A A G +
Sbjct: 542 SQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSE 601
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+ R MT+ GL + LI A
Sbjct: 602 QAVNAFRVMTSDGLKPSLLALNSLINA 628
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 48 SEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQ 107
+ YN + S Q R ++ M G+ PN T +LV + R DA L +
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 108 MKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 167
MK +GL P T+YN LI+ + S+QA+ M +KP++ L++A D R
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 634
Query: 168 LDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
A+++ M G+ + Y L+ A
Sbjct: 635 DAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 70/143 (48%)
Query: 52 TVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIM 111
++ +L R ++++ G+KP +++L+ G ++ ++DA +++M+
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 112 GLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRV 171
G+ PD Y+ LI + + A +L+EM+ +V+PN + LL G +
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 172 NAIVRDMTAAGLGLNKFCYAGLI 194
++++M + G+ ++ Y +I
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVI 451
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 54/131 (41%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E KR + + Y+ + + R R +M V+PN F L+ G
Sbjct: 364 EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
Q F L +MK +G+ PD YN +I T GK D A+ + M ++P+ T+
Sbjct: 424 EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 157 CLLHACAADGR 167
L+ GR
Sbjct: 484 TLIDCHCKHGR 494
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ- 138
P+ + L+ + + + A + ++MK G PD ++YN LI+ +++ +A++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 139 ---ILEEMKFME-VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L++MK +E +PNV TY LL A A G++D+VNA+ +D+ + + + + + G++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 195 VAH 197
A+
Sbjct: 251 DAY 253
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ- 138
P+ + L+ + + + A + ++MK G PD ++YN LI+ +++ +A++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 139 ---ILEEMKFME-VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L++MK +E +PNV TY LL A A G++D+VNA+ +D+ + + + + + G++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 195 VAH 197
A+
Sbjct: 251 DAY 253
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E K ++ ++ YN + L + + + M GV+P F +L+ G R
Sbjct: 281 DEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRA 340
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+++ YF+++ +G PDV Y +I+ ++A ++ +EM PNV TY
Sbjct: 341 GKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTY 400
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIE 213
++ G+ A++++M + G N Y+ L+ KN A KV+E
Sbjct: 401 NSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKN--------AGKVLE 450
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%)
Query: 42 NYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDA 101
NY YN + SL ++ L+ Y+ M+ DG P+ T++ ++ R +
Sbjct: 217 NYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRL 276
Query: 102 FYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHA 161
+ L++M G PD+ YN L+ A+ +L M+ + V+P V + L+
Sbjct: 277 YRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDG 336
Query: 162 CAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ G+L+ + + G + CY +I +
Sbjct: 337 LSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGY 372
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLV----VGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNF 122
R ++ M+ +G+KPN ++++L+ V M G+ A L +K G++PDV Y
Sbjct: 208 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT----ALSVLGDIKQNGIIPDVVSYTC 263
Query: 123 LISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 182
L+++ G+S+ +A ++ M+ KPNV TY L+ A ++G L I R M G
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 183 LGLNKFCYAGLIVA-HKNKTPVTDD 206
+ N L+ A ++K V D
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVD 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M +GV P+ T + ++ G + A + MK + PD T +N +I K
Sbjct: 107 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 166
Query: 133 SDQAIQILEEM--KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
S QA+ + M K E +P+V T+ ++H + G ++ A+ M A GL N Y
Sbjct: 167 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 191 AGLIVAH 197
L+ A+
Sbjct: 227 NALMGAY 233
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N + YN+ GS Y M VK + TF L+ G+ R S+ +A +L
Sbjct: 362 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 421
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M+ + + +Y+ ++ K +A I +MK +P+V Y +LHA A
Sbjct: 422 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 481
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+ + + +M A G+ + + L+ A
Sbjct: 482 EKWGKACELFLEMEANGIEPDSIACSALMRA 512
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ YN + G+ + D+ +G+ P+ ++ L+ R + A
Sbjct: 222 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
M+ P+V YN LI G + +A++I +M+ +KPNV + LL AC+
Sbjct: 282 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFA 208
+ V+ ++ + G+ LN Y I ++ N + A
Sbjct: 342 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 384
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
Y NV YNT+ SL + + D M G++P+ T++SL+ +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
L+ M MG+ PDV ++ LI GK +A + EM V PN+ TY L++
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD 205
G LD ++ + + G N Y LI + V D
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Query: 44 ANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
++++ + T+ R L MM G +P+ TF SLV G +R +A
Sbjct: 111 SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
++Q+ +G P+V +YN +I + + + A+ +L+ MK M ++P+V TY L+
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSS 223
G I+ DM G+ + ++ LI + + + + + E ++RS +
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA-KKQYNEMIQRSVNPNI 289
Query: 224 VEANSANAENVMMGVSDE 241
V NS + G+ DE
Sbjct: 290 VTYNSLINGLCIHGLLDE 307
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
+ Y ++ +N + + Q + + D M+ +GV P+ T++SL+ G + S+ +D
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
M G P++ +N L+ + + + D+A+ +LEEMK V P+ T+ L+
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 161 ACAADGRLDRVNAIVRDMTAA 181
+G LD + R M A
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEA 595
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G KP+ T+++L+ G + S+ Q+A +L +M GL PD YN LI+ K A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+I+ + F P+ TY L+ +G +R A+ + G+ N Y LI
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 197 HKNK 200
N+
Sbjct: 401 LSNQ 404
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV YNT+ L+ Q ++M G+ P TF+ LV G + + DA +
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
M G PD+ +N LI + A++IL+ M V P+V TY LL+
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCY 190
+ + V + M G N F +
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTF 534
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%)
Query: 39 YKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRM 98
+++ + YNTVF +L ++ + D ++ M DG P+ T++ L+ R +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 99 QDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICL 158
+A +++ PD+ YN LI+ GK+ + D+A +EM+ + P+V TY L
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 159 LHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ R++ ++ +M G N Y L+
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
++++ KP+ +++SL+ + + +A +M+ GL PDV Y+ L+ GK
Sbjct: 500 FEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGK 559
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
++ + A + EEM +PN+ TY LL +GR + M GL +
Sbjct: 560 TERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSIT 619
Query: 190 YAGL----IVAH-----KNKTPVT 204
Y L V+H + K P+T
Sbjct: 620 YTVLERLQSVSHGKSRIRRKNPIT 643
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 82 RDTF-HSLVVGTM-RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 139
RD + +++++ TM R + +A N+M GL +V YN L+ K K D+AIQ+
Sbjct: 268 RDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQV 327
Query: 140 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIV 175
M +PN TY LL+ A+G+L R++ +V
Sbjct: 328 FSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
K + N+ Y + R ++DM+ G+KP+ + ++ G +R +
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKS 350
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA + MK G P+V Y +I K + + AI+ ++M ++P+ Y CL+
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 200
+LD V ++++M G + Y LI N+
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 63/149 (42%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y + Q + +DDM+ G++P+ + L+ G ++ + L
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M+ G PD YN LI K + A +I +M E++P++ T+ ++ +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ A+ +M G+ + Y LI
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDNSYTVLI 515
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
D + + PN T+ L+ G R + +A N M GL PD+ +N ++ +S+
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR 347
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
AI++ MK PNVR+Y ++ ++ DM +GL + Y
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 192 GLIVA 196
LI
Sbjct: 408 CLITG 412
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
++ V G L + + +++M+ G KPN + L+ G + ++DA L++M
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G PDV Y+ +++ K+ ++A+ +F + N Y L+ GR+D
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFA 208
+ +M+ G + +CY LI A V + A
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIA 488
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
Y +M G++ F ++ G + ++ + + M G P+V +Y LI K
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
S + + AI++L M KP+V TY +++ +GR++ GL +N
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 190 YAGLI 194
Y+ LI
Sbjct: 435 YSSLI 439
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D+M+ G+KP+ T+++++ G + + AF + +++ G PDV YN L+
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
++ +++ +M + PNV TY L+ DG+++ +++ M GL + + Y
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 191 AGLIVA 196
LI A
Sbjct: 372 DPLIAA 377
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
++++ + YN + GSL ++ + L + ++ D +P T+ L+ TM + +
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
A +++M GL PD+ YN +I K D+A +++ ++ +P+V +Y LL
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLR 306
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
A G+ + ++ M + N Y+ LI
Sbjct: 307 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N S YNT+F +L + +MM +G+ P+ T++S++ R + +AF L
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
M+ P V YN ++ K+ + AI +LE M +PN TY L+
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556
Query: 166 G 166
G
Sbjct: 557 G 557
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G+ P+ ++ L+ R R+ A FL M G +PD+ YN +++T K+ +DQA
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
++I ++ + PN +Y + A + G R ++ +M + G+ ++ Y +I
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 79 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STCGKSKNSDQAI 137
+P+ +++L+ G + +R+ DA L++M+ PD YN +I S C + K D A+
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK-LDLAL 213
Query: 138 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
++L ++ +P V TY L+ A +G +D ++ +M + GL + F Y +I
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
++ YNTV +L + + + + G PN +++++ A + +
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY-ICLLHACAA 164
+M G+ PD YN +IS + D+A ++L +M+ E P+V TY I LL C A
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 165 DGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
D +N ++ M G N+ Y LI
Sbjct: 522 HRIEDAIN-VLESMVGNGCRPNETTYTVLI 550
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 61/151 (40%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V YN + +L Q + M + PN T+ L+ R ++++A L
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
MK GL PD Y+ LI+ + D AI+ LE M P++ Y +L +
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
G+ D+ I + G N Y + A
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
++ + + S YN + SL ++ L+ DDM + +++TF + R +++
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVK 179
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A ++M+ G + + +N ++ T KS+N A ++ ++MK +P++++Y LL
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ L RV+ + R+M G + Y +I AH
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAH 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 37 EYYKRNYAN----NVSEYNTVFGSLTAQRRNFLLRDAY---DDMMLDGVKPNRDTFHSLV 89
E+++R+ ++ YN + G+ +R + DAY D+M L GV PN T+ ++
Sbjct: 323 EFFERSKSSGFPLEAPTYNALVGAYCWSQR---MEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 90 VGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVK 149
+R R ++A+ + M P V+ Y ++ + D AI+I +EMK V
Sbjct: 380 HHLIRMQRSKEAY---EVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL 436
Query: 150 PNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 183
P + + L+ A + +LD +M G+
Sbjct: 437 PGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+++M KP+ F SL+ G ++ DA F + K G + YN L+
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
S+ + A + ++EM+ V PN RTY +LH
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDIILH 380
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 31 FCAPS------EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLR--DAYDDMMLDGVKPNR 82
FCA E + + + S Y T+F SL A++ +++ + D D M GV+P +
Sbjct: 542 FCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEK-DYISKAQDLLDRMWKLGVEPEK 600
Query: 83 DTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEE 142
+ L+ R + ++ A F + +VPD+ Y +I+T + QA + E+
Sbjct: 601 SMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFED 660
Query: 143 MKFMEVKPNVRTYICLLHACAADGRLD-----RVNAIVRDMTAAGLGLNKFCY 190
MK +VKP+V TY LL+ +D LD ++ D+ + +N++C+
Sbjct: 661 MKRRDVKPDVVTYSVLLN---SDPELDMKREMEAFDVIPDVVYYTIMINRYCH 710
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E+ + N + + YN F +L + + + +M G+ P+ + +L+ G
Sbjct: 385 KEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQ 444
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+ DAF + +M G PD+ +YN L + + +A + L+ M+ VKP T+
Sbjct: 445 GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTH 504
Query: 156 ICLLHACAADGRLDRVNA 173
++ G LD+ A
Sbjct: 505 NMVIEGLIDAGELDKAEA 522
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV + T+ R R + M+ GV PN ++ L+ G + M +A L
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
++M+ + L PDV Y LI+ +A ++ ++MK + P+ TY L+H +
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKN 199
+++ + +MTA+G+ N ++ LI + N
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
D +M GV+PN TF +L+ G ++ A +M I G+VPDV Y LI
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRL 168
K N +A+++ +M + PN T+ CL+ +GRL
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
++ M GV PN T+ +++ G + ++ A+ ++ + L+P+V ++ L+ K
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
++ A + M V PN+ Y CL+H G + ++ +M + L + F
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376
Query: 190 YAGLIVAHKNKTPVTDDFAA--KVIEFVERSKIWSSVEANSANAENVMMGVSDEELYNLP 247
Y LI N + D A ++ + ++ +I+ S SA +++ G E YN+
Sbjct: 377 YTILI----NGLCIEDQVAEANRLFQKMKNERIFPS----SATYNSLIHGYCKE--YNME 426
Query: 248 TA 249
A
Sbjct: 427 QA 428
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D+M G+KPN + ++ R ++M++A MK G++P++ Y+ +I K+
Sbjct: 223 DEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKT 282
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
N QA + +E+ E+ PNV + L+ L ++ M G+ N + Y
Sbjct: 283 GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVY 342
Query: 191 AGLIVAH 197
LI H
Sbjct: 343 NCLIHGH 349
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 139
P+ S++ G +R R + M GLVPDV +Y L C K + ++
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 140 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L+EM + +KPNV Y + D +++ + M G+ N + Y+ +I
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y T+ S + + + + M GV+ N TF +L+ G R ++ AF ++
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK--FMEVKPNVRTYICLLHACAADGR 167
+ PD ++N LIS CG+S D+A +L EMK + P+ + L+ AC G+
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 168 LDRVNAIVRDMTAAGL 183
++R + + + G+
Sbjct: 625 VERAKEVYQMIHKYGI 640
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
Y DM V P+ F +L+ + +AF L K G+ Y+ L+ C
Sbjct: 667 YKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCN 726
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+K+ +A+++ E++K ++++P + T L+ A +L + + ++ GL N
Sbjct: 727 AKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTIT 786
Query: 190 YAGLIVAHKNKTPVTDDF 207
Y+ L++A + K DDF
Sbjct: 787 YSMLMLASERK----DDF 800
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 76/158 (48%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E RN +V ++ + + + ++ Y++M+ G+ P+ T++SL+ G + +
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
+ +A + M G PD+ Y+ LI++ K+K D +++ E+ + PN TY
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L+ G+L+ + ++M + G+ + Y L+
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E R A + YN++ + +D M+ G +P+ T+ L+ +
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
R+ D ++ GL+P+ YN L+ +S + A ++ +EM V P+V TY
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFA 208
LL +G L++ I M + + L Y +I N + V D ++
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 6/207 (2%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E + N YNT+ + ++ + +M+ GV P+ T+ L+ G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
+ A +M+ + + +YN +I + D A + + VKP+V TY
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVE 216
++ G L + + R M G + F Y LI AH + + +E +E
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS-----VELIE 584
Query: 217 RSKIWSSVEANSANAENVMMGVSDEEL 243
K+ A+S+ + V+ +SD L
Sbjct: 585 EMKV-CGFSADSSTIKMVIDMLSDRRL 610
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G N T+++LV G + + F+ ++ GL P+ Y+FL+ K + +D+A
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+++L+E+ +PN+ +Y LL +GR D A+ R++ A G N Y L+
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
+ ++ G KPN L+ + +R++ A + M G++PD + Y +L++ K
Sbjct: 95 ESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKR 154
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
N A+Q++E+M+ N TY L+ G L++ V + GL N F Y
Sbjct: 155 GNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTY 214
Query: 191 AGLIVA 196
+ L+ A
Sbjct: 215 SFLLEA 220
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 63 NFLLRDAY------------DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKI 110
+FLL AY D++++ G +PN +++ L+ G + R DA ++
Sbjct: 215 SFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPA 274
Query: 111 MGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 170
G +V YN L+ ++A +L EM + P+V TY L+++ A GR ++
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 171 VNAIVRDMT 179
++++M+
Sbjct: 335 ALQVLKEMS 343
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 16/165 (9%)
Query: 48 SEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQ 107
+ YN V L + + L+ D+M+ KPN T++++ S++Q+AFY +
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
Query: 108 MKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 167
+ Y +I++ + N+ A Q+L EM P+ TY
Sbjct: 414 LSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTY------------ 461
Query: 168 LDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVI 212
+A++R + G+ ++ +N P D+F A ++
Sbjct: 462 ----SALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMIL 502
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E K+ +N YNT+ + + + +M G+KP+ T++ L+ R
Sbjct: 369 EMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYAR-- 426
Query: 97 RMQDAFY--FLNQMKIMGLVPDVTLYNFLISTCGKSKN-SDQAIQILEEMKFMEVKPNVR 153
RMQ L +M+ +GL P+V Y LIS G++K SD A MK + +KP+
Sbjct: 427 RMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSH 486
Query: 154 TYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHK 198
+Y L+HA + G ++ A +M G+ + Y ++ A +
Sbjct: 487 SYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFR 531
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
+ ++ M GVK ++D F LV ++A +M+ G+ + +YN L+
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
KS + ++ + EM+ +KP+ TY L+ A A + D V ++R+M GL N
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 188 FCYAGLIVAHKNKTPVTDDFAA 209
Y LI A+ +T D AA
Sbjct: 450 KSYTCLISAY-GRTKKMSDMAA 470
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE K +V Y +V + L + + M+ + +K R T+++L+ G +
Sbjct: 509 EEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+A +++ MGL P V YN L++ + + Q+L+EM + +KP+ TY
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITY 628
Query: 156 ICLLHA 161
+++A
Sbjct: 629 STMIYA 634
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G+ P+ T+ +LV G +R + +F L MK+ G +P+V Y +I+ + ++A
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
++L M+ V PN TY ++ +G+LDR VR M G LN Y+ L+
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 62 RNFLLRDAYD--DMMLDGVK--PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDV 117
R LRDA D+M V PN ++ L+ G R+++AF +QM G P
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 118 TLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRD 177
Y LI D+A + +EM KPNV TY L+ DG+++ N + R
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 178 MT 179
M
Sbjct: 362 MV 363
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%)
Query: 79 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 138
KPN TF+ L+ G R + A + L +M GL PD+ YN LI + + + A +
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYK 462
Query: 139 ILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+L M +++P+ T+ +++A G+ D +A + M G+ L++ LI
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 84 TFHSL-VVGTM--RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 140
T HSL V+ M +G ++++ L ++ +GLVP V Y L+ +S + + +IL
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 141 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 200
E MK PNV Y +++ GR++ ++ M +G+ N Y ++ + N
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 201 TPVTDDFAAKVIEFVERS-----KIWSSV 224
+ D V VER +I+SS+
Sbjct: 665 GKL-DRALETVRAMVERGYELNDRIYSSL 692
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D+M+ G KPN T+ L+ G R ++++A +M + P V YN LI+ K
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
A ++L M+ KPNVRT+ L+ G+ + +++ M GL +
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 190 YAGLI 194
Y LI
Sbjct: 444 YNVLI 448
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y T+ ++T Q++ + ++ G K + F++++ M+DA L +MK
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK 142
Query: 110 IMGLVPDVTLYNFLI---STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 166
+GL P + YN LI GK + S + + ++ E ++V PN+RT+ L+ A
Sbjct: 143 ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 167 RLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 200
+++ +V+ M G+ + Y + + K
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y T+ ++T Q++ + ++ G K + F++++ M+DA L +MK
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK 142
Query: 110 IMGLVPDVTLYNFLI---STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 166
+GL P + YN LI GK + S + + ++ E ++V PN+RT+ L+ A
Sbjct: 143 ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 167 RLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 200
+++ +V+ M G+ + Y + + K
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 65/121 (53%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
+M + KPN T +V G R R++D F+ +MK M + ++ ++N LI+ + +
Sbjct: 251 VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD 310
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
D ++L MK VK +V TY +++A ++ G +++ + ++M AG+ + Y+
Sbjct: 311 RDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 370
Query: 193 L 193
L
Sbjct: 371 L 371
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
K + N+ Y + R ++DM+ G+KP+ + ++ G +R +
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 350
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA + MK G P+V Y +I K + + AI+ ++M ++P+ Y CL+
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 200
+LD V ++++M G + Y LI N+
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 62/149 (41%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y + Q + +DDM+ G++P+ + L+ G ++ + L
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M+ G PD YN LI K + +I +M E++P++ T+ ++ +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 486
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ A+ +M G+ + Y LI
Sbjct: 487 RNYEMGRAVWDEMIKKGICPDDNSYTVLI 515
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
K + N+ Y + R ++DM+ G+KP+ + ++ G +R +
Sbjct: 290 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 349
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA + MK G P+V Y +I K + + AI+ ++M ++P+ Y CL+
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 200
+LD V ++++M G + Y LI N+
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 450
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 62/149 (41%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y + Q + +DDM+ G++P+ + L+ G ++ + L
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M+ G PD YN LI K + +I +M E++P++ T+ ++ +
Sbjct: 426 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ A+ +M G+ + Y LI
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTVLI 514
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 38 YYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSR 97
+ + Y S Y +F SL + D M V+P R ++ + +
Sbjct: 547 FVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNN 606
Query: 98 MQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYIC 157
+++A + M GL+PD+ Y +I T + +A + E+MK +KP+V TY
Sbjct: 607 VREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV 666
Query: 158 LL-----------HACAADGRLDRVNA--IVRDMTAAGLGLNKFCYAGLI 194
LL C+ G + + A ++R+ +AAG+GL+ CY LI
Sbjct: 667 LLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLI 716
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 48 SEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQ 107
S Y T+ G+ +A + ++ + M G +P F +L+ G + R+ A L++
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 108 MKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 167
MK L D+ LYN I + GK D A + E++ +KP+ TY ++ R
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 168 LD 169
LD
Sbjct: 289 LD 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V YN + L + +++M D PN T++ L+ R ++ AF
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ M+ GL P+V N ++ KS+ D+A + EEM + P+ T+ L+
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
GR+D + M + N Y LI
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
+++M G+ PN T++SL+ ++ + +A MK + P+ Y LI+ K
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
+ ++A +EM+ +KP+ +Y ++ A G + A+ A G + CY
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 191 AGLIVAHKNKTPVTDDFA 208
+I N D F+
Sbjct: 801 NAMIEGLSNGNRAMDAFS 818
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 139
P ++++++G + +A+ L + + G +P V YN +++ K D+A+++
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 140 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 183
EEMK + PN+ TY L+ G+LD + M AGL
Sbjct: 366 FEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 38 YYKRNYANNVSE-YNTVFGSLTAQRRNFLLRDAYD----DMMLDGVKPNRDTFHSLVVGT 92
Y +R + E YN++ + A+ RNF DA D +M + G P+ +T +V+G
Sbjct: 88 YERRTELPHCPESYNSLL-LVMARCRNF---DALDQILGEMSVAGFGPSVNTCIEMVLGC 143
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
++ +++++ + + M+ P + Y LI +SD + + ++M+ + +P V
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVI 212
+ L+ A +GR+D +++ +M ++ L + Y V D KV
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN-----------VCIDSFGKVG 252
Query: 213 EFVERSKIWSSVEANSANAENV----MMGV 238
+ K + +EAN + V M+GV
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 139
P+ ++ L+ G ++ + + MK G V D YN +I K ++A Q+
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 140 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
LEEMK +P V TY ++ A RLD + + + + LN Y+ LI
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 65/161 (40%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE R + + Y+ + L + + M G + ++ ++ G +
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
++ A+ L +MK G P V Y +I K D+A + EE K ++ NV Y
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
L+ GR+D I+ ++ GL N + + L+ A
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 44 ANNVSEYNTVFGSLTAQRRNF-LLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
A N+ YN + ++ +++ F R D M +G KP+ ++ +++ + ++ DA
Sbjct: 146 APNLQTYNVLI-KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDAL 204
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEE-MKFMEVKPNVRTYICLLHA 161
++M G+ PDVT YN LI K K+ A+++ + ++ V PNV+T+ ++
Sbjct: 205 ELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISG 264
Query: 162 CAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ GR+D I M + + Y+ LI
Sbjct: 265 LSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V Y ++ L ++R + +M GV+ N ++L+ G +R SR+ +A +FL
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M G P V YN LI K+ +A ++EM KP+++TY LL D
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 166 GRLDRVNAIVRDMTAAGL 183
++D + +GL
Sbjct: 548 RKIDLALELWHQFLQSGL 565
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 99/246 (40%), Gaps = 29/246 (11%)
Query: 39 YKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRM 98
+K + +V Y+TV L + + +D+M GV P+ ++ L+ G ++
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 99 QDAFYFLNQ-MKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYIC 157
+ A ++ ++ + P+V +N +IS K D ++I E MK E + ++ TY
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 158 LLHACAADGRLDRVNAIVR---------DMTAAGLGLNKFCYAG---------LIVAHKN 199
L+H G +D+ ++ D+ L FC G I+ HKN
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 200 KTPVTDDFAAKVIEFVERSK------IWSSVEANSANAENVMMGVSDEELYNLPTAEYVH 253
+ + + +E K IW + A A+ G+ ++ L YV+
Sbjct: 356 SVNIV-SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF---IHGLCVNGYVN 411
Query: 254 RRGGFL 259
+ G +
Sbjct: 412 KALGVM 417
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%)
Query: 47 VSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLN 106
+ YNT+ + ++ + + GV PN T++ L+ + + + A FL+
Sbjct: 114 IRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLD 173
Query: 107 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
M G PDV Y+ +I+ K+ D A+++ +EM V P+V Y L+
Sbjct: 174 WMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILI 226
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D M+ G +PN T+ +V G + A LN+M+ + DV ++N +I + K
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
++ D A+ + +EM+ ++PNV TY L+ + GR + ++ DM + N +
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333
Query: 191 AGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVEANSANAE 232
LI D K +FVE K++ + S + +
Sbjct: 334 NALI-----------DAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 2/175 (1%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ +N + + + + YDDM+ + P+ T++SLV G R+ A
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
M PDV YN LI KSK + ++ EM + + TY L+ D
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKI 220
G D + + M + G+ + Y+ L+ N + + A +V +++++S+I
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL--EKALEVFDYMQKSEI 501
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
++ KR+ ++ YN++ R + ++ M+ P+ T+++L+ G +
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R++D +M GLV D Y LI + D A ++ ++M V P++ TY
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
LL +G+L++ + M + + L+ + Y +I
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
E+ + + + YN + + + L MM G +P+ T SL+ G G
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+ DA ++QM MG PD + LI + +A+ +++ M +PN+ TY
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAA 181
+++ G D ++ M AA
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAA 254
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y+++ L + R DM+ + PN TF++L+ ++ + +A
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ M + PD+ YN L++ D+A Q+ E M + P+V TY L+
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
R++ + R+M+ GL + Y LI
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLI 442
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
KR NV + + + + R+ Y +M+ V PN T++SL+ G +
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA Y + M G PDV YN LI+ KSK + +++ EM + + + TY L+
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 160 HACAADGRLDRVNAIVRDMTAAGL 183
H G+L+ + M G+
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGV 390
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
MM G +P+ T SL+ G +G+R Q+A ++ M G VP+V +YN +I+ K+++
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
+ A+++ M+ ++ + TY L+ + GR ++RDM + N +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 193 LI 194
LI
Sbjct: 260 LI 261
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDA---YDDMMLDGVKPNRDTFHSLVVGT 92
+E +R+ NV YN++ L DA +D M+ G P+ T+++L+ G
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHG---CLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
+ R++D +M GLV D YN LI ++ + A ++ M V P++
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
TY LL +G++++ +V D+ + + ++ Y +I
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
+ NV YNTV L R + + M G++ + T+++L+ G R DA
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICL---- 158
L M + P+V + LI T K N +A + +EM V PNV TY L
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 159 -LHACAADGR 167
+H C D +
Sbjct: 300 CIHGCLGDAK 309
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE +R+ + YN + R + + M+ PN T+++L+ G +
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R++D +M GLV + Y +I ++ + D A + ++M V ++ TY
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
LLH + G+LD I + + + + LN F Y +I
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV +NT+ SL R + D + +M G++PN T++SL+ R DA L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ M + P+V +N LI K +A ++ EEM + P+ TY L++
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
RLD + + M + N Y LI
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 63/126 (50%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D M+ G +P+ T+ ++V G + + A LN+M+ + +V ++N +I + K
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
++ + A+ + EM+ ++PNV TY L++ GR + ++ +M + N +
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 191 AGLIVA 196
LI A
Sbjct: 332 NALIDA 337
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV YN++ L R +M+ + PN TF++L+ + ++ +A
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M + PD YN LI+ D+A Q+ + M + PN++TY L++
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
R++ + R+M+ GL N Y +I
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTII 440
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y TV + + R+ YD+M+ + P+ T+ L+ G + R++ AF + +MK
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G+ P+V +N L+ K+ N D+A + L +M+ + PN +Y L+ + +
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE 672
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVER 217
V + ++M + + + + L H K D ++ +EF+ER
Sbjct: 673 EVVKLYKEMLDKEIEPDGYTHRALF-KHLEK-----DHESREVEFLER 714
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G+ P+ T+ +++ G + + + A ++M L P V Y LI K+ +QA
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
Q EMK V+PNV T+ LL+ G +D + M G+ NK+ Y LI
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
++ Y+ + + YN++ + Y +M +G PN TF SL+ G + +RM
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
A ++MK M L D+ Y LI K + A + E+ + + PNV Y L+
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G++D + + M G+ + F Y +I
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NVS YN++ + D Y M+ DG+ + T+ +++ G ++ + A
Sbjct: 694 NVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLY 753
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+++ +G+VPD L+ L++ K +A ++LEEMK +V PNV Y ++ +
Sbjct: 754 SELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHRE 813
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAA 209
G L+ + +M G+ + + L+ K P ++
Sbjct: 814 GNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISS 857
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 2/185 (1%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R NV +N + + + + YD+M+ + P+ T+ SL+ G R+
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A + M P+V YN LI+ K+K D+ +++ EM + N TY L+
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
H D + + M + G+ N Y L+ + A V E+++RSK
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK--AMVVFEYLQRSK 500
Query: 220 IWSSV 224
+ ++
Sbjct: 501 MEPTI 505
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
E+ + ++N+ YN + + + L MM G +P+ T SL+ G G
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+ DA ++QM MG PD + LI + +A+ +++ M +PN+ TY
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+++ G +D ++ M AA + N Y+ +I
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D M+ G +PN T+ +V G + + AF LN+M+ + +V +Y+ +I + K
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
++ D A+ + EM+ V+PNV TY L+ R + ++ DM + N +
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Query: 191 AGLIVA 196
LI A
Sbjct: 334 NALIDA 339
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y+TV SL R + + +M GV+PN T+ SL+ R DA L
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ M + P+V +N LI K +A ++ +EM + P++ TY L++
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
RLD + M + N Y LI
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 63/135 (46%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E KR+ ++ Y+++ R + ++ M+ PN T+++L+ G +
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+ + +M GLV + Y LI ++++ D A + ++M V PN+ TY
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 156 ICLLHACAADGRLDR 170
LL +G+L++
Sbjct: 474 NTLLDGLCKNGKLEK 488
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y+++ L R DM+ + PN TF++L+ ++ ++ +A
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
++M + PD+ Y+ LI+ D+A + E M + PNV TY L++
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
R+D + R+M+ GL N Y LI
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 59/146 (40%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E +R N Y T+ R + + M+ DGV PN T+++L+ G +
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
+++ A ++ + P + YN +I K+ + + + VKP+V Y
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAG 182
++ G + +A+ R M G
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDG 570
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLV--VGTMRGSRMQDAFY 103
NV YNT+ ++ + L R +++M+ G+ PN T +LV G R +R DA
Sbjct: 325 NVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAR--DALQ 382
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK-FMEVKPNVRTYICLLHAC 162
+MK D LYN L++ C ++A ++ +MK ++ +P+ +Y +L+
Sbjct: 383 LWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIY 442
Query: 163 AADGRLDRVNAIVRDMTAAGLGLN 186
+ G+ ++ + +M AG+ +N
Sbjct: 443 GSGGKAEKAMELFEEMLKAGVQVN 466
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN SL R+ L+ + +M+ DGV+ + T+ +++ R + A + +M
Sbjct: 189 YNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMY 248
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQ------------------------------- 138
GL+PD Y+ ++ KS ++ +
Sbjct: 249 KTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYD 308
Query: 139 ----ILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+L+EMK M+VKPNV Y LL A G+ ++ +M AGL N+ L+
Sbjct: 309 GIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV 368
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRD-AYDDMMLDGVKPNRDTFHSLVVGTMR 94
EE K + ++ +NT+ +R F+ D +D M + PN +++S V G R
Sbjct: 217 EELEKNGFEPDLISFNTLLEEF-YRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTR 275
Query: 95 GSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRT 154
+ DA ++ MK G+ PDV YN LI+ N ++ ++ EMK + P+ T
Sbjct: 276 NKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVT 335
Query: 155 YICLLHACAADGRLDRV 171
Y L+ G LDR
Sbjct: 336 YCMLIPLLCKKGDLDRA 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
+N + N+ YN+ LT ++ + D M +G+ P+ T+++L+ + +++
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
N+MK GL PD Y LI K + D+A+++ EE ++ Y ++
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVE 376
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKT---PVT 204
G++D +V++ G + F Y + A K KT PV+
Sbjct: 377 RLMGAGKIDEATQLVKN----GKLQSYFRYLPDLSAGKKKTTSSPVS 419
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 30 FFCAPSEEYYKRNYANNVSEYNTVFGSLTAQRRNFLLR--DAYDDMMLDGVKPNRDTFHS 87
+C P+E Y T+ SL R L + + +D+M GV + ++ +
Sbjct: 135 IWCKPNEHIY------------TIMISLLG-REGLLDKCLEVFDEMPSQGVSRSVFSYTA 181
Query: 88 LVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK-NSDQAIQILEEMKFM 146
L+ R R + + L++MK + P + YN +I+ C + + + + + EM+
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 147 EVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
++P++ TY LL ACA G D + R M G+ + Y+ L+
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 50 YNTVFGSLTAQRRNFL-LRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQM 108
YNTV + ++ L + +M +G++P+ T+++L+ +A M
Sbjct: 214 YNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 109 KIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRL 168
G+VPD+T Y+ L+ T GK + ++ +L EM P++ +Y LL A A G +
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 169 DRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ M AAG N Y+ L+
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLL 359
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G+ P+ T+ LV + R++ L +M G +PD+T YN L+ KS + +A
Sbjct: 277 GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEA 336
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ + +M+ PN TY LL+ GR D V + +M ++ + Y LI
Sbjct: 337 MGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+++ Y+ + + RR + D +M G P+ +++ L+ + +++A
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+QM+ G P+ Y+ L++ G+S D Q+ EMK P+ TY L+
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVE 225
G V + DM + + Y G+I A K + +D A K+++++ + I S +
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFAC-GKGGLHED-ARKILQYMTANDIVPSSK 458
Query: 226 A 226
A
Sbjct: 459 A 459
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDA---YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
+++ YN + L A ++ +++A + M G PN +T+ L+ + R D
Sbjct: 316 DITSYNVL---LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR 372
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
+MK PD YN LI G+ + + + +M ++P++ TY ++ AC
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
G + I++ MTA + + Y G+I A
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEA 466
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 62/130 (47%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+ DM+ + ++P+ +T+ ++ +G +DA L M +VP Y +I G+
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+ ++A+ M + P++ T+ LL++ A G + AI+ + +G+ N+
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDT 529
Query: 190 YAGLIVAHKN 199
+ I A+K
Sbjct: 530 FNAQIEAYKQ 539
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G+KP D HSL R ++DA L M G P ++N ++ C K+ + D+A
Sbjct: 371 GIKPFSDVIHSLC----RMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEA 426
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
++L+ M+ +KP+V TY ++ A G +D I+ + L+ Y LI
Sbjct: 427 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV Y+ V +L + D + DM+ G PN TF++L+ ++ R +
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVY 348
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
NQMK +G PD YNFLI + +N + A+++L M + + N T+
Sbjct: 349 NQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTF 398
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
++ V +L+ +RR + +D + D +P+ + +LV G R + +A +MK
Sbjct: 224 FSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
+ G+ P+V Y+ +I + +A + +M PN T+ L+ GR +
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE 342
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+V + M G + Y LI AH
Sbjct: 343 KVLQVYNQMKKLGCEPDTITYNFLIEAH 370
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 65 LLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI 124
L+R + M VKPN + F S++ R + A+ L +K L P+ +++N ++
Sbjct: 426 LVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCIL 485
Query: 125 STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG 184
+ + KN A+ ++++MK VKP+ T+ L++ C + D + +M AG+
Sbjct: 486 AGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQE---DAITKYYEEMKQAGVQ 542
Query: 185 LNKFCYAGLIVAH 197
K Y LI A+
Sbjct: 543 ATKRIYMSLIDAY 555
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 78 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 137
++PN F+ ++ G R + A + QMK G+ PD + +LI+ C + D
Sbjct: 474 LEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQE---DAIT 530
Query: 138 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 188
+ EEMK V+ R Y+ L+ A AA G+ ++ ++ D + N+
Sbjct: 531 KYYEEMKQAGVQATKRIYMSLIDAYAASGKFEKAKQVLVDPDVPAINQNEL 581
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M+ + VKPN T ++V G +M++A F +MK +G+ P++ ++N LI +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 183
D ++++ M+ VKP+V T+ L++A ++ G + R I DM G+
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
++ ++ +G KP+ T+ +LV R +++++ GL PD L+N +I+ +
Sbjct: 342 FNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSE 401
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
S N DQA++I E+MK KP T+ L+ G+L+
Sbjct: 402 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLE 441
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
+ Y DM+ G+ P+ F L G R + A LNQM+ G+ P+V +Y +IS
Sbjct: 622 EIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 128 GKSKNSDQAIQILEEM-KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 178
+ +A+Q+ ++M + + PN+ TY L+ + + +++DM
Sbjct: 682 CSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 2/181 (1%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R NV ++ + + + + YD+M+ + P+ T+ SL+ G R+
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A + M P+V YN LI K+K D+ +++ EM + N TY L+
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
H D + + M + G+ + Y+ L+ N V + A V E+++RSK
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV--ETALVVFEYLQRSK 496
Query: 220 I 220
+
Sbjct: 497 M 497
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E +R N Y T+ R + + M+ DGV P+ T+ L+ G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
+++ A ++ + PD+ YN +I K+ + + + VKPNV TY
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
++ G + +A+ R+M G + Y LI AH
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
Y + +NT+ L R D M++ G +P+ T+ +V G + + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
L +M+ + P V +YN +I KN + A+ + EM ++PNV TY L+
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
GR + ++ DM + N ++ LI A
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
E+ ++N+ Y+ + + + L MM G +P+ T +SL+ G G
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+R+ DA + QM MG PD +N LI + + +A+ +++ M +P++ TY
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD 205
+++ G +D ++++ M + Y +I A N V D
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G +P+ TF++L+ G R +R +A +++M + G PD+ Y +++ K + D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ +L++M+ +++P V Y ++ A ++ + +M G+ N Y LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV YN++ L R DM+ + PN TF +L+ ++ ++ +A
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
++M + PD+ Y+ LI+ D+A + E M + PNV TY L+
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
R+D + R+M+ GL N Y LI
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLI 438
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST 126
R+ +D+M G KPN TF LV G + LN M+ G++P+ +YN ++S+
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSS 226
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM-------- 178
+ +D + +++E+M+ + P++ T+ + A +G++ + I DM
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 179 -----TAAGLGLNKFCYAGLI 194
L L FC GL+
Sbjct: 287 PRPNSITYNLMLKGFCKVGLL 307
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN + S +RR + Y DM+L G+ P TF+ L+ S + A ++M
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G P+ + L+ K+ +D+ +++L M+ V PN Y ++ + +GR D
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 170 RVNAIVRDMTAAGL 183
+V M GL
Sbjct: 235 DSEKMVEKMREEGL 248
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 7/198 (3%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
++ YN L + M G+ P+ +++ L+ G + + DA +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
MK G+ PD Y L+ D A +L+EM PN T LLH+
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVE 225
GR+ ++R M G GL+ +IV + D K IE V+ ++ S
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVT-CNIIVDGLCGSGELD----KAIEIVKGMRVHGS-- 497
Query: 226 ANSANAENVMMGVSDEEL 243
A N N +G+ D+ L
Sbjct: 498 AALGNLGNSYIGLVDDSL 515
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
K+ ++ YN++ L + + F + D+M G+ PN T+++ + G +++
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA L++M + P+V + +LI K + D A ++ E + Y +
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMF 705
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI--VAHKNKTPVTDDFAAKVIE 213
+ A G+L + ++ + G L F Y L+ + K++ V K+I+
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 64/122 (52%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M+ V PN T+ S++ G ++ +++A L +M+ +VP+ Y +I K+
Sbjct: 390 MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
+ AI++ +EM+ + V+ N L++ GR+ V +V+DM + G+ L++ Y
Sbjct: 450 EEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTS 509
Query: 193 LI 194
LI
Sbjct: 510 LI 511
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%)
Query: 69 AYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 128
Y MM G+ PN T+++++ G +++ +L++MK G+ PD YN LIS
Sbjct: 735 TYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQA 794
Query: 129 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 188
K N ++ I EM + P TY L+ A G++ + ++++M G+ N
Sbjct: 795 KIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTS 854
Query: 189 CYAGLI 194
Y +I
Sbjct: 855 TYCTMI 860
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 69 AYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 128
AY M G++P+ TF+ ++ + + ++MK G+ P + N ++
Sbjct: 560 AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLC 619
Query: 129 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 188
++ ++AI IL +M ME+ PN+ TY L + R D + + + G+ L++
Sbjct: 620 ENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQ 679
Query: 189 CYAGLI 194
Y LI
Sbjct: 680 VYNTLI 685
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+++ +N + S Q + + +D M G+KP+ + + +V +M++A + L
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 631
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
NQM +M + P++T Y + T K K +D + E + +K + + Y L+
Sbjct: 632 NQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKL 691
Query: 166 GRLDRVNAIVRDMTAAGL 183
G + ++ DM A G
Sbjct: 692 GMTKKAAMVMGDMEARGF 709
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 66/149 (44%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N++ Y + + +R + ++ ++ G+K +R +++L+ + + A +
Sbjct: 642 NLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVM 701
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
M+ G +PD +N L+ + +A+ M + PNV TY ++ +
Sbjct: 702 GDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDA 761
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G + V+ + +M + G+ + F Y LI
Sbjct: 762 GLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y T+ G+L ++ + D+M+ DG +PN T++ L+ R + + +A NQM+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G PD Y LI K+ D A+ + + M+ + P+ TY +++ G L
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ + +M G N Y ++ H
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 46 NVSEYNTVFGSLTAQRRNFL--LRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
N YN + S R N+L + ++ M G KP+R T+ +L+ + + A
Sbjct: 398 NTVTYNRLIHSYG--RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
+M+ GL PD Y+ +I+ GK+ + A ++ EM PN+ TY ++ A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
+ RDM AG +K Y+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYS 543
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y T+ G+L ++ + D+M+ DG +PN T++ L+ R + + +A NQM+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G PD Y LI K+ D A+ + + M+ + P+ TY +++ G L
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ + +M G N Y ++ H
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 46 NVSEYNTVFGSLTAQRRNFL--LRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
N YN + S R N+L + ++ M G KP+R T+ +L+ + + A
Sbjct: 398 NTVTYNRLIHSYG--RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
+M+ GL PD Y+ +I+ GK+ + A ++ EM PN+ TY ++ A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
+ RDM AG +K Y+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYS 543
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
Y T+ G+L ++ + D+M+ DG +PN T++ L+ R + + +A NQM+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G PD Y LI K+ D A+ + + M+ + P+ TY +++ G L
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ + +M G N Y ++ H
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 46 NVSEYNTVFGSLTAQRRNFL--LRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
N YN + S R N+L + ++ M G KP+R T+ +L+ + + A
Sbjct: 398 NTVTYNRLIHSYG--RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
+M+ GL PD Y+ +I+ GK+ + A ++ EM PN+ TY ++ A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
+ RDM AG +K Y+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYS 543
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST 126
++ D+M G+ PN+ T+ +L+ ++ A L M G PDV Y I
Sbjct: 544 KELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKI 603
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVN---AIVRDMTAAGL 183
C ++K A + EEM+ ++KPN TY LL A + G L V AI +DM AG
Sbjct: 604 CAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGY 663
Query: 184 GLN 186
N
Sbjct: 664 KPN 666
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 47/172 (27%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL---NQMKIMGLVPDVTLYNFL 123
R Y+D++ + +KPN V+ ++ D Y L M+I+ + D+T YN L
Sbjct: 287 RYIYEDLLKENIKPN-----IYVINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNIL 341
Query: 124 ISTCGKSKNSDQAIQILEEMKFME------------------------------------ 147
+ TC + D A I +E K ME
Sbjct: 342 LKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMK 401
Query: 148 ---VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
V PN T+ L+ ACA G +++ N + +M A+G N C+ L+ A
Sbjct: 402 SVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHA 453
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 139
P T++S++ G + R+ DA L+ M G PDV ++ LI+ K+K D ++I
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 140 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKN 199
EM + N TY L+H G LD ++ +M + G+ + + ++ +
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 200 KTPVTDDFAAKVIEFVERSK 219
K + FA ++E +++S+
Sbjct: 128 KKELRKAFA--ILEDLQKSE 145
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
Query: 45 NNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYF 104
N+V+ Y T+ L QRR M G N+ + L+ G + + ++A
Sbjct: 326 NDVT-YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 105 LNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAA 164
+M G P++ +Y+ L+ + ++A +IL M PN TY L+
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 165 DGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G + + ++M G NKFCY+ LI
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 38 YYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSR 97
+ K N V+ YNT+ L + + + M+ PN T+ +L+ G ++ R
Sbjct: 284 FLKGCVPNEVT-YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 98 MQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYIC 157
DA L+ M+ G + +Y+ LIS K +++A+ + +M KPN+ Y
Sbjct: 343 ATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV 402
Query: 158 LLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
L+ +G+ + I+ M A+G N + Y+ L+
Sbjct: 403 LVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 42 NYANNVSEYNTVFGSLTAQRRNFLLR--DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
N + N +N V +L R F+ R + + M P+ T+ +L+ G + R+
Sbjct: 182 NISPNGLSFNLVIKALCKLR--FVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A L++M+ G P +YN LI K + + ++++ M PN TY L+
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
H G+LD+ +++ M ++ N Y LI
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLI 334
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN + L + + D+M L G PN T+++L+ G ++ A L +M
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
+P+ Y LI+ K + + A+++L M+ N Y L+ +G+ +
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLI 194
++ R M G N Y+ L+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLV 404
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R Y N Y+ + L + + + M G KPN + LV G R +
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A LN+M G +P+ Y+ L+ K+ ++A+Q+ +EM N Y L+
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
GR+ + M G+ + Y+ +I
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 62 RNFLLRDAYD--DMML--DGVKPNRDTFHSLVVGTM-RGSRMQDAFYFLN-------QMK 109
R FL A+D + ML D KP+ +T+ L+ + R +++ + +L+ QMK
Sbjct: 156 RKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMK 215
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G++PD + N +I K D+AI++ +EM +PN TY L+ GR+
Sbjct: 216 SNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVG 275
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+ ++M G+ N CY LI +
Sbjct: 276 QGLGFYKEMQVKGMVPNGSCYMVLICS 302
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+ +M L G +PN T+ LV G R+ F +M++ G+VP+ + Y LI +
Sbjct: 246 FKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSM 305
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 167
+ D+A++++ +M + P++ TY +L GR
Sbjct: 306 ERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGR 343
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 74/145 (51%)
Query: 42 NYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDA 101
N A N YNT+ + Q + + Y+DM+ +G++ + T+++L+ G + ++ + A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 102 FYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHA 161
F+ ++ LVP+ + ++ LI KN+D+ ++ + M PN +T+ L+ A
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 162 CAADGRLDRVNAIVRDMTAAGLGLN 186
+ D + ++R+M + L+
Sbjct: 458 FCRNEDFDGASQVLREMVRRSIPLD 482
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G++PN TF++L+ G R ++Q+A +MK + + P+ YN LI+ + + + A
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+ E+M ++ ++ TY L+ + + V+++ L N ++ LI+
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 197 H 197
Sbjct: 423 Q 423
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
DM G + ++++L+ G + A N M GL P+V +N LI ++
Sbjct: 263 DMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM 322
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
+A ++ EMK + V PN TY L++ + G + DM G+ + Y
Sbjct: 323 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 192 GLI 194
LI
Sbjct: 383 ALI 385
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 74/145 (51%)
Query: 42 NYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDA 101
N A N YNT+ + Q + + Y+DM+ +G++ + T+++L+ G + ++ + A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 102 FYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHA 161
F+ ++ LVP+ + ++ LI KN+D+ ++ + M PN +T+ L+ A
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 162 CAADGRLDRVNAIVRDMTAAGLGLN 186
+ D + ++R+M + L+
Sbjct: 458 FCRNEDFDGASQVLREMVRRSIPLD 482
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G++PN TF++L+ G R ++Q+A +MK + + P+ YN LI+ + + + A
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+ E+M ++ ++ TY L+ + + V+++ L N ++ LI+
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 197 H 197
Sbjct: 423 Q 423
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
DM G + ++++L+ G + A N M GL P+V +N LI ++
Sbjct: 263 DMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM 322
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
+A ++ EMK + V PN TY L++ + G + DM G+ + Y
Sbjct: 323 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 192 GLI 194
LI
Sbjct: 383 ALI 385
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E R + N+ YNT+ Q R + D M+ + P+ TF SL+ G
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+ D + GLV + Y+ L+ +S A ++ +EM V P+V TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
LL +G+L++ I D+ + + L Y +I
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G +P+ TF++L+ G ++ +A +++M G PDV YN +++ +S ++ A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ +L +M+ VK +V TY ++ + DG +D ++ ++M G+ + Y L+
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 2/174 (1%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
KR N Y+ + + L + + +M+ GV P+ T+ L+ G +++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
A ++ + + +Y +I K + A + + VKPNV TY ++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIE 213
G L N ++R M G N Y LI AH +T +AK+IE
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA--SAKLIE 567
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V YN++ + L D M VK + T+ +++ R + A
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 106 NQMKIMGLVPDVTLYNFLI-STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAA 164
+M+ G+ V YN L+ C K +D A+ +L++M E+ PNV T+ LL
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 165 DGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+G+L N + ++M G+ N Y L+
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLM 340
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDA-FYFLNQM 108
Y T+ SL AQ+ M G KP+ ++ L+ R R+++A F +M
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 109 KIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEV-KPNVRTYICLLHACAADGR 167
+G+ + + YN +I+ D+AI++L+EM+ + P+V TY LL +C G
Sbjct: 357 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Query: 168 LDRVNAIVRDM-TAAGLGLNKFCYAGLI 194
+ V ++++M T L L++ Y LI
Sbjct: 417 VVEVGKLLKEMVTKHHLSLDESTYTFLI 444
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 38/179 (21%)
Query: 78 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI------------- 124
+ PN TF+ + G + +R+++A + + +MK G P V Y +I
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 125 ----------------------STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
S+ K ++A+++ MK KP+ Y CL+H
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 163 AADGRLDRVNAIVR-DMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKI 220
A GRL+ + R +M G+ +N Y +I + + +D A ++++ +E S +
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE--EDKAIELLKEMESSNL 396
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDA-FYFLNQM 108
Y T+ SL AQ+ M G KP+ ++ L+ R R+++A F +M
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 109 KIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEV-KPNVRTYICLLHACAADGR 167
+G+ + + YN +I+ D+AI++L+EM+ + P+V TY LL +C G
Sbjct: 357 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Query: 168 LDRVNAIVRDM-TAAGLGLNKFCYAGLI 194
+ V ++++M T L L++ Y LI
Sbjct: 417 VVEVGKLLKEMVTKHHLSLDESTYTFLI 444
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 38/179 (21%)
Query: 78 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI------------- 124
+ PN TF+ + G + +R+++A + + +MK G P V Y +I
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 125 ----------------------STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
S+ K ++A+++ MK KP+ Y CL+H
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 163 AADGRLDRVNAIVR-DMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKI 220
A GRL+ + R +M G+ +N Y +I + + +D A ++++ +E S +
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE--EDKAIELLKEMESSNL 396
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E+ +++ +VS Y++ + A+ + L + Y + + K N +S++ ++
Sbjct: 122 EWMQQHGKISVSTYSSCIKFVGAKNVSKAL-EIYQSIPDESTKINVYICNSILSCLVKNG 180
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS-DQAIQILEEMKFMEVKPNVRTY 155
++ +QMK GL PDV YN L++ C K KN +AI+++ E+ ++ + Y
Sbjct: 181 KLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMY 240
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNK 200
+L CA++GR + ++ M G N + Y+ L+ ++ K
Sbjct: 241 GTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWK 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMR-GSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 128
+D M DG+KP+ T+++L+ G ++ + A + ++ G+ D +Y +++ C
Sbjct: 189 FDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICA 248
Query: 129 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 188
+ S++A +++MK PN+ Y LL++ + G + + ++ +M + GL NK
Sbjct: 249 SNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKV 308
Query: 189 CYAGLI 194
L+
Sbjct: 309 MMTTLL 314
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
+ + ++ N + GSL L Y ++ GV N T + +V + +M+
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
FL+Q++ G+ PD+ YN LIS ++A +++ M P V TY +++
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKI 220
G+ +R + +M +GL + Y L++ A K + VE K+
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME-----------ACKKGDVVETEKV 362
Query: 221 WSSVEA 226
+S + +
Sbjct: 363 FSDMRS 368
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Query: 69 AYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 128
+D+M+ +KP +S++ G R D FL +M G VPD YN LI
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 129 KSKNSDQAIQILEEMKFME--VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 186
+ +N +A ++++M+ + + P+V TY +LH ++ ++R M G+ +
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 187 KFCYAGLIVAHKNKTPVTDDF 207
+ Y +I ++ +T+ F
Sbjct: 692 RSTYTCMINGFVSQDNLTEAF 712
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 53 VFGSLTAQRRNF----LLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQM 108
++ SL + RN D Y M+ DG++ + T+ +L+ G ++ + A +M
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750
Query: 109 KIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRL 168
+ +GLVPD +Y +++ K + +++ EEMK V PNV Y ++ +G L
Sbjct: 751 QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 810
Query: 169 DRVNAIVRDMTAAGL 183
D + +M G+
Sbjct: 811 DEAFRLHDEMLDKGI 825
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D M +G PN TF L+ + M+ A F +M+++GL P V + +I K
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+ ++A+++ +E F NV +L G+ D ++ M + G+G N
Sbjct: 422 GQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 190 YAGLIVAH 197
Y +++ H
Sbjct: 481 YNNVMLGH 488
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 36/190 (18%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
R NV YN V Q+ L R + +++ G+KPN T+ L+ G R Q+
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN 531
Query: 101 AFYFLNQM-----KIMGLVPDVTL-------------------------------YNFLI 124
A +N M ++ G+V + YN +I
Sbjct: 532 ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSII 591
Query: 125 STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG 184
K D A+ EEM + PNV TY L++ + R+D+ + +M G+
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 185 LNKFCYAGLI 194
L+ Y LI
Sbjct: 652 LDIPAYGALI 661
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 61 RRNFLL--RDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVT 118
+RN L ++ Y M+ GV + T L+ ++R + +A L++ G PD
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269
Query: 119 LYNFLISTCGKSKNSDQAIQILEEMKFMEV-KPNVRTYICLLHACAADGRLDRVNAIVRD 177
LY+ + C K+ + A +L EMK ++ P+ TY ++ A G +D + +
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 178 MTAAGLGLNKFCYAGLIVAH 197
M + G+ +N LI H
Sbjct: 330 MLSDGISMNVVAATSLITGH 349
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%)
Query: 33 APSEEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGT 92
A EE + NV Y ++ L R + D+M GVK + + +L+ G
Sbjct: 605 AAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
+ S M+ A +++ GL P +YN LIS N A+ + ++M ++ ++
Sbjct: 665 CKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL 724
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
TY L+ DG L + + +M A GL ++ Y ++
Sbjct: 725 GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E R A + Y ++ + D M+ G PN TF+ L+ G +
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+R+ D +M + G+V D YN LI + + A ++ +EM +V PN+ TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD 205
LL +G ++ I + + + L+ Y +I N + V D
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRR----NFLLRDAYDDMMLDGVKPNRDTFHSLVVGT 92
E + N+ YN + G R LLRD M+ + PN TF L+
Sbjct: 288 EMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD----MIKRKINPNVVTFSVLIDSF 343
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
++ ++++A +M G+ PD Y LI K + D+A Q+++ M PN+
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
RT+ L++ R+D + R M+ G+ + Y LI
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 5/179 (2%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
R + YNT+ + + ++ + +M+ V PN T+ L+ G +
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
A +++ + D+ +YN +I + D A + + VKP V+TY ++
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
G L + R M G + + Y LI AH + D A K ++ +E K
Sbjct: 552 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH-----LGDGDATKSVKLIEELK 605
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 64/149 (42%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N Y V + + L + M +K + + ++ G + + +AF
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
N+M++ G+ ++ YN LI + D ++L +M ++ PNV T+ L+ + +
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 346
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G+L + ++M G+ + Y LI
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLI 375
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R+Y ++V Y+ + S TA+ R + L + M N +TF ++ R ++
Sbjct: 127 QRHYEHSVRAYHMMIES-TAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVD 185
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A Y N M+ L P++ +N L+S KSKN +A ++ E M+ P+ +TY LL
Sbjct: 186 EAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILL 244
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ L + + R+M AG + Y+ ++
Sbjct: 245 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMV 279
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 64/121 (52%)
Query: 78 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 137
++PN ++++++ +A + M+ + +V YN +I GK+ ++A
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 138 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+++EM+ ++PN TY ++ G+LDR + + + ++G+ +++ Y +IVA+
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 198 K 198
+
Sbjct: 481 E 481
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 68/152 (44%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
Y +V YN V ++ ++ + +D+M + P+R T+ +L+ + A
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 103 YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC 162
+L +M+ + D+ LY+ LI + + +AI I +K + P++ Y +++
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 163 AADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
++++M AG+ N Y+ L+
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E +R N YNT+ L + + + M+ DGV P+ T+ L+ G +
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
+++ A ++ + PD+ YN +I K+ + + + VKPNV Y
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
++ G + +A+ R+M G N Y LI A
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E KR+ ++ Y+++ R + ++ M+ PN T+++L+ G +
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+++ +M GLV + YN LI ++ + D A +I ++M V P++ TY
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 156 ICLLHACAADGRLDR 170
LL G+L++
Sbjct: 469 SILLDGLCKYGKLEK 483
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 2/185 (1%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R NV ++ + + + + YD+M+ + P+ T+ SL+ G R+
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A + M P+V YN LI K+K ++ +++ EM + N TY L+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
G D I + M + G+ + Y+ L+ + A V E++++SK
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK--ALVVFEYLQKSK 495
Query: 220 IWSSV 224
+ +
Sbjct: 496 MEPDI 500
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
MM G +P+ T SL+ G G R+ +A ++QM +M P+ +N LI
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
+ +A+ +++ M +P++ TY +++ G +D ++++ M + + Y
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 193 LIVAHKNKTPVTD 205
+I A N V D
Sbjct: 261 IIDALCNYKNVND 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Query: 84 TFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 143
+++ L+ R S++ A L +M +G PD+ + L++ K +A+ ++++M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 144 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPV 203
ME +PN T+ L+H + A++ M A G + F Y ++ + +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 204 TDDFAAKVIEFVERSKIWSSV 224
D A +++ +E+ KI + V
Sbjct: 237 --DLALSLLKKMEKGKIEADV 255
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF 102
Y NV+ +N V S + + F + M+ GV PN +F+ ++ G + M+ A
Sbjct: 214 YVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFAL 273
Query: 103 YFLNQMKIMG---LVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
L +M +M + P+ YN +I+ K+ D A +I +M V N RTY L+
Sbjct: 274 QLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALV 333
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
A G D + +MT+ GL +N Y ++
Sbjct: 334 DAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV 368
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
Y +M G N +TF+ ++ + S++ +A +M G+ P+V +N +I K
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACK 265
Query: 130 SKNSDQAIQILEEMKFME---VKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 186
+ + A+Q+L +M M V PN TY +++ GRLD I DM +G+ N
Sbjct: 266 TGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 187 KFCYAGLIVAH 197
+ Y L+ A+
Sbjct: 326 ERTYGALVDAY 336
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E + N+ ++ +N++ TA Y + G++P+ T+++L++ R
Sbjct: 917 EMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDR 976
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
R ++ + + QM+ +GL P + Y LIS GK K +QA Q+ EE+ +K + Y
Sbjct: 977 RPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYH 1036
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGL 183
++ G + +++ M AG+
Sbjct: 1037 TMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 37/188 (19%)
Query: 44 ANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD--A 101
+ V YN + G + + ++ D M G P+ +F++L+ ++ + A
Sbjct: 222 GDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLA 281
Query: 102 FYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK----------------- 144
L+ ++ GL PD YN L+S C + N D A+++ E+M+
Sbjct: 282 VELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISV 341
Query: 145 -------------FMEVK-----PNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 186
FME++ P+ TY LL+A A + ++V + + M G G +
Sbjct: 342 YGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD 401
Query: 187 KFCYAGLI 194
+ Y +I
Sbjct: 402 EMTYNTII 409
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN++ + +R +++ Y M G + T+++++ + ++ A MK
Sbjct: 370 YNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Query: 110 -IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRL 168
+ G PD Y LI + GK+ + +A ++ EM + +KP ++TY L+ A G+
Sbjct: 430 GLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 169 DRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ M +G + Y+ ++
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
++ L G P+ T++SL+ R + QM+ MG D YN +I GK
Sbjct: 357 ELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQG 416
Query: 132 NSDQAIQILEEMKFMEVK-PNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
D A+Q+ ++MK + + P+ TY L+ + R A++ +M G+ Y
Sbjct: 417 QLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTY 476
Query: 191 AGLIVAH 197
+ LI +
Sbjct: 477 SALICGY 483
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 50 YNTVFGSLTAQRRNFLLRDA---YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLN 106
YNT+ L+A R+ L A ++DM +P+ T+++++ R +A
Sbjct: 300 YNTL---LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFM 356
Query: 107 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 166
++++ G PD YN L+ + +N+++ ++ ++M+ M + TY ++H G
Sbjct: 357 ELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQG 416
Query: 167 RLDRVNAIVRDMTA-AGLGLNKFCYAGLI 194
+LD + +DM +G + Y LI
Sbjct: 417 QLDLALQLYKDMKGLSGRNPDAITYTVLI 445
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 21/228 (9%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQ----RRNFLLRDAYDDMMLDGVKPNRDTFHSLVVG 91
+E KR +V+ +N + L A+ + ++L++ M G P T+++++
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQK----MEKSGYAPTIVTYNTVLHW 277
Query: 92 TMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPN 151
+ R + A L+ MK G+ DV YN LI +S + +L +M+ + PN
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 152 VRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKV 211
TY L++ + +G++ + ++ +M + GL N + LI H ++
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG---------- 387
Query: 212 IEFVERSKIWSSVEANSANAENVMMGVSDEELYNLPTAEYVHRRGGFL 259
F E K++ +EA V GV + L AE+ RG ++
Sbjct: 388 -NFKEALKMFYMMEAKGLTPSEVSYGVLLDGL--CKNAEFDLARGFYM 432
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 2/163 (1%)
Query: 43 YANNVSEY--NTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
Y N S Y N + GS+ + + +M+ + P+ TF+ L+ +
Sbjct: 192 YGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEK 251
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
+ Y + +M+ G P + YN ++ K AI++L+ MK V +V TY L+H
Sbjct: 252 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 311
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPV 203
R+ + ++RDM + N+ Y LI N+ V
Sbjct: 312 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
KR N YNT+ + + + + ++M+ G+ PN TF++L+ G + +
Sbjct: 331 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 390
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A M+ GL P Y L+ K+ D A MK V TY ++
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+G LD ++ +M+ G+ + Y+ LI
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQR---RNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTM 93
E +N N++ YN + + ++ +FLL Y ++L+G+ P++ T HSLV+G
Sbjct: 784 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL---YRSIILNGILPDKLTCHSLVLGIC 840
Query: 94 RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVR 153
+ ++ L G+ D +N LIS C + + A +++ M + + +
Sbjct: 841 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 900
Query: 154 TYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
T ++ + R ++ +M+ G+ Y GLI
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 941
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+D+M G P T+ SL+ G +G +++A FL + + D +YN L++ K
Sbjct: 606 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 167
S N +A+ + EM + P+ TY L+ G+
Sbjct: 666 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
Y+ M+L+G + TF+ LV + ++ +A F+ M G++P+ ++ LI+ G
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
S +A + +EM + P TY LL G L ++ + A ++
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 190 YAGLIVA 196
Y L+ A
Sbjct: 656 YNTLLTA 662
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
KR+ +V YNT+ + + + A +M DG + + +++L+ + +M+
Sbjct: 726 KRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQME 785
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
L +MK PD YN +I+ G+ D+ +L+E+K + P++ +Y L+
Sbjct: 786 KFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLI 845
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
A G ++ +V++M + +K Y L+ A
Sbjct: 846 KAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTA 882
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLD-GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQM 108
+NTV + T ++ N L + MML+ GV+PN T L+ + +++A + + M
Sbjct: 213 FNTVIYACT-KKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHM 271
Query: 109 KIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRL 168
+ G+V + + Y+ +I+ + + D+A ++++ MK V+ + ++ +L+A + G++
Sbjct: 272 RKFGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKM 330
Query: 169 DRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ +I+ M AAG N Y LI +
Sbjct: 331 ELAESILVSMEAAGFSPNIIAYNTLITGY 359
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G PN +++L+ G + +M+ A +++ +GL PD T Y +I G++ N ++A
Sbjct: 344 GFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEA 403
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
+E+K KPN L++ A G D + DMT G+G G+I+
Sbjct: 404 KHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMT--GIGCQYSSILGIILQ 461
Query: 197 HKNKTPVTD 205
K D
Sbjct: 462 AYEKVGKID 470
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 74 MLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNS 133
+ D +KP+ TF+ L+ G + + DA ++ MK+ PDV Y + K +
Sbjct: 265 LFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDF 324
Query: 134 DQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGL 193
+ ++LEEM+ PNV TY ++H+ ++ + M G + Y+ L
Sbjct: 325 RRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 194 I 194
I
Sbjct: 385 I 385
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE + NV Y V SL ++ Y+ M DG P+ + SL+ +
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFME---VKPNV 152
R +DA M G+ DV +YN +IS + A+++L+ M+ E PNV
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 451
Query: 153 RTYICLL 159
TY LL
Sbjct: 452 ETYAPLL 458
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ Y + + + + ++ + DG++P+ +++L+ R A
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ M+ MG PD YN ++ G++ A + EEMK + + P +++++ LL A +
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVE 225
+ + AIV++M+ G+ + F ++ + ++ +F + KI + +E
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSML-----------NLYGRLGQFTKMEKILAEME 466
Query: 226 ANSANAENVMMGVSDEELYNLPTAEYVHRRGGFLVR 261
A D YN+ ++ + GFL R
Sbjct: 467 NGPCTA--------DISTYNILIN--IYGKAGFLER 492
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 85 FHSLVVGTM-RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 143
+++ + G M R ++A +MK P YN +I+ GK+ S + ++ EM
Sbjct: 231 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 290
Query: 144 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ + KPN+ TY L++A A +G ++ I + GL + + Y L+ ++
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 344
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ Y + + + + ++ + DG++P+ +++L+ R A
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ M+ MG PD YN ++ G++ A + EEMK + + P +++++ LL A +
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 439
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVE 225
+ + AIV++M+ G+ + F ++ + ++ +F + KI + +E
Sbjct: 440 RDVTKCEAIVKEMSENGVEPDTFVLNSML-----------NLYGRLGQFTKMEKILAEME 488
Query: 226 ANSANAENVMMGVSDEELYNLPTAEYVHRRGGFLVR 261
A D YN+ ++ + GFL R
Sbjct: 489 NGPCTA--------DISTYNILIN--IYGKAGFLER 514
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 85 FHSLVVGTM-RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM 143
+++ + G M R ++A +MK P YN +I+ GK+ S + ++ EM
Sbjct: 253 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 312
Query: 144 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
+ + KPN+ TY L++A A +G ++ I + GL + + Y L+ ++
Sbjct: 313 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESY 366
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 85 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEM 143
++ ++ G +GS++ +A+ + I G+ PDV YN +IS CGKS SD + + +M
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV-LFHKM 598
Query: 144 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 188
K +P+ TY L+ C G +D+ ++ +M + G + F
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 45 NNVSEYNTVFGSLTAQRRNFLLRDA-YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
+ +SE +FG + FL A +D M+ G+ P TF++L+ G R+ +A
Sbjct: 190 DRISEALALFGYMVET--GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
+N+M GL DV Y +++ K ++ A+ +L +M+ +KP+V Y ++
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
DG + +M G+ N F Y +I
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 7/209 (3%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E +R N + YNT+ +D + +M+ GV P+ T + L+ G
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
++++A +++ + D YN +I K D+A + + V+P+V+TY
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVE 216
++ + N + M G + Y LI + K IE +
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID-----KSIELIS 631
Query: 217 --RSKIWSSVEANSANAENVMMGVSDEEL 243
RS +S AE ++ VSDEE+
Sbjct: 632 EMRSNGFSGDAFTIKMAEEIICRVSDEEI 660
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%)
Query: 47 VSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLN 106
V +NT+ L + R + M+ G+ + T+ ++V G + + A L+
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 107 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 166
+M+ + PDV +Y+ +I K + A + EM + PNV TY C++ + G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 167 RLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
R ++RDM + + + LI A
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISA 375
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 93/214 (43%), Gaps = 6/214 (2%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R +V +N + + + + F D+M+ + P+ T++S++ G + +R
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA + + M PDV +N +I ++K D+ +Q+L E+ + N TY L+
Sbjct: 419 DAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
H L+ + ++M + G+ + L+ + + A ++ E ++ SK
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE--ALELFEVIQMSK 532
Query: 220 IWSSVEANSANAENVMMGVSDEELYNLPTAEYVH 253
I A + + G +E ++L + +H
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 44 ANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLV-------VGTMRGS 96
N +S Y ++ + QR R DM G+ P+ F+SL+ V
Sbjct: 205 GNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSG 264
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
+ +A + +M+ + P YN L+S G+++ ++ QILE+MK P+ +Y
Sbjct: 265 LVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYY 324
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVE 216
++ GR + N IV +M G + Y LI V +FA ++ E ++
Sbjct: 325 FVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERV--NFALQLFEKMK 382
Query: 217 RSKI 220
RS +
Sbjct: 383 RSSV 386
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YNT+ + QR + M DGV N+ T+ L+ +++ +M DA ++M+
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMR 321
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G+ DV +Y LIS + N +A + +E+ + P+ TY L+ G +
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSV 224
++ +M + G+ + + + LI + K V D A+ + + +E+ + V
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV--DEASMIYDVMEQKGFQADV 434
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
+M GV+PN T++ ++ + ++++A M+ G+ PD Y LI +
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
N D+A+++ EM + N TY ++ + G+ D + +M G ++ Y
Sbjct: 554 NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYT 613
Query: 192 GLI 194
LI
Sbjct: 614 ALI 616
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+ ++ G P+ T L+ R + DA MK GL DV YN L+ GK
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 183
+ ++ ++++EM+ + P+V TY L+H+ G +D N I+ ++ G
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+ ++ G P+ T L+ R + DA MK GL DV YN L+ GK
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 183
+ ++ ++++EM+ + P+V TY L+H+ G +D N I+ ++ G
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D+ +PN TF L+ G + ++AF L +M+ + PD +N LIS K
Sbjct: 226 DEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKK 285
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
++ I +LE MK +PN TY +L+ R ++ M + G+ + Y
Sbjct: 286 GRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSY 345
Query: 191 AGLIVA-HKNKTPVTDDFAAKVI---EFVERSKIWSSV 224
+++ + K+ V D+ + + FV ++ +W V
Sbjct: 346 KKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKV 383
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 2/207 (0%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R NV +N++ + + + +D+M+ + PN T++SL+ G R+
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A M +PDV YN LI+ K+K +++ +M + N TY L+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
H D + + M + G+ N Y L+ + A V E++++SK
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK--AMVVFEYLQKSK 480
Query: 220 IWSSVEANSANAENVMMGVSDEELYNL 246
+ + + +E + E+ ++L
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 9/159 (5%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V Y+TV SL R + + +M G++P+ T+ SL+ R DA L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ M + P+V +N LI K +A ++ +EM + PN+ TY L++
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 166 GRLDRVNAI---------VRDMTAAGLGLNKFCYAGLIV 195
RLD I + D+ +N FC A +V
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 60/135 (44%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E +R+ N+ YN++ R + + M+ P+ T+++L+ G +
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
++ D M GLV + Y LI ++ + D A + ++M V PN+ TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 156 ICLLHACAADGRLDR 170
LL +G+L++
Sbjct: 454 NTLLDGLCKNGKLEK 468
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%)
Query: 44 ANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
++N+ YN + L + + MM G P+ T +SL+ G G+R+ +A
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
++QM MG PD + L+ + + +A+ ++E M +P++ TY +++
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G D ++ M + + Y+ +I
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
DM+ + PN TF+SL+ + ++ +A ++M + P++ YN LI+
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHA-CAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
D+A QI M + P+V TY L++ C A +D + + RDM+ GL N Y
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME-LFRDMSRRGLVGNTVTY 418
Query: 191 AGLI 194
LI
Sbjct: 419 TTLI 422
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 66 LRDAYDDMML---DGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNF 122
LRDA + L GV+PN ++ + +R +R++ A FL +M+++G+VP+V YN
Sbjct: 258 LRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNC 317
Query: 123 LISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAA- 181
+I ++AI++LE+M P+ +Y ++ + R+ V +++ M
Sbjct: 318 MIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEH 377
Query: 182 GLGLNKFCYAGLI 194
GL ++ Y LI
Sbjct: 378 GLVPDQVTYNTLI 390
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G+ + F ++V R +++DA L M+ G+ P++ + N I ++ ++A
Sbjct: 237 GIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 296
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
++ LE M+ + + PNV TY C++ R++ ++ DM + G +K Y
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSY 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
NV YN + R + +DM G P++ ++++++ + R+ + +
Sbjct: 311 NVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 370
Query: 106 NQM-KIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAA 164
+M K GLVPD YN LI K ++D+A+ L++ + + + Y ++HA
Sbjct: 371 KKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCK 430
Query: 165 DGRLDRVNAIVRDMTAAG 182
+GR+ ++ +M + G
Sbjct: 431 EGRMSEAKDLINEMLSKG 448
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 47 VSEYNTVFGSLTAQRRNFL-LRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
V YNTV +L + + + +D M D V P+ T+ L+ G + +R++ A L
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M G P Y LI+ GK+K + A ++ +E+K + R Y ++
Sbjct: 433 EEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKC 492
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G+L + +M G G + + Y L+
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
D +++M G P T+ L+ G + R+ +A+ F M GL PDV N L++
Sbjct: 289 DLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL 348
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHAC-AADGRLDRVNAIVRDMTAAGLGLN 186
GK ++ + EM P V +Y ++ A + + V++ M A + +
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 187 KFCYAGLI 194
+F Y+ LI
Sbjct: 409 EFTYSILI 416
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 48 SEYNTVFGSLTAQRRNFLLRDAYDDMMLDG-VKPNRDTFHSLVVGTMRGSRMQDAFYFLN 106
S YN+V L + ++ + + Y +M +G P+ T+ +L+ + R A +
Sbjct: 198 STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFD 257
Query: 107 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 166
+MK + P +Y L+ K ++A+ + EEMK P V TY L+ G
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 167 RLDRVNAIVRDMTAAGL 183
R+D +DM GL
Sbjct: 318 RVDEAYGFYKDMLRDGL 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 69/142 (48%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
D +++M G P+ +++L+ G ++ + +A L +M+ G D+ +N +++
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGF 559
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
++ +AI++ E +K +KP+ TY LL A G + ++R+M G +
Sbjct: 560 ARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDA 619
Query: 188 FCYAGLIVAHKNKTPVTDDFAA 209
Y+ ++ A N DD ++
Sbjct: 620 ITYSSILDAVGNVDHEKDDVSS 641
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 85 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEM 143
++ ++ G +GS++ +A+ + I G+ PDV YN +IS CGKS SD + + +M
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV-LFHKM 598
Query: 144 KFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 188
K +P+ TY L+ C G +D+ ++ +M + G + F
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 45 NNVSEYNTVFGSLTAQRRNFLLRDA-YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
+ +SE +FG + FL A +D M+ G+ P TF++L+ G R+ +A
Sbjct: 190 DRISEALALFGYMV--ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
+N+M GL DV Y +++ K ++ A+ +L +M+ +KP+V Y ++
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
DG + +M G+ N F Y +I
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%)
Query: 47 VSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLN 106
V +NT+ L + R + M+ G+ + T+ ++V G + + A L+
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 107 QMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADG 166
+M+ + PDV +Y+ +I K + A + EM + PNV TY C++ + G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 167 RLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
R ++RDM + + + LI A
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISA 375
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN + + + D + + + GV+P+ T++ ++ G S + DA ++MK
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G PD + YN LI C K+ D++I+++ EM+ + T I ++ DGRLD
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT-IKMVADLITDGRLD 658
Query: 170 R 170
+
Sbjct: 659 K 659
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 93/214 (43%), Gaps = 6/214 (2%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R +V +N + + + + F D+M+ + P+ T++S++ G + +R
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA + + M PDV +N +I ++K D+ +Q+L E+ + N TY L+
Sbjct: 419 DAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
H L+ + ++M + G+ + L+ + + A ++ E ++ SK
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE--ALELFEVIQMSK 532
Query: 220 IWSSVEANSANAENVMMGVSDEELYNLPTAEYVH 253
I A + + G +E ++L + +H
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 63/158 (39%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E +R N + YNT+ +D + +M+ GV P+ T + L+ G
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
++++A +++ + D YN +I K D+A + + V+P+V+TY
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
++ + N + M G + Y LI
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M+ G +PN +++L+ G + + A LN+M+ GL DV YN L++ S
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
A ++L +M + P+V T+ L+ G LD + ++M + + N Y
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 193 LI 194
+I
Sbjct: 287 II 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 64/155 (41%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
K Y NV YNT+ L + + ++M G+ + T+++L+ G R
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
DA L M + PDV + LI K N D+A ++ +EM V PN TY ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ GRL M + G N Y LI
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
MM G +P+ TF SL+ G +R+ DAF + M G P+V +YN LI K+
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAG 192
+ A+++L EM+ + +V TY LL GR ++RDM + + +
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 193 LI 194
LI
Sbjct: 252 LI 253
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST 126
++ Y +M+ V PN T++S++ G R+ DA + M G P+V YN LIS
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRL 168
K + D+ +++ + M ++ TY L+H G+L
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 45 NNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYF 104
NNV+ YN++ L R + + +D M G PN T+++L+ G + + +
Sbjct: 280 NNVT-YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 105 LNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAA 164
+M G D+ YN LI + A+ I M V P++ T+ LLH
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 165 DGRLDRVNAIVRDM 178
+G ++ DM
Sbjct: 399 NGEIESALVKFDDM 412
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%)
Query: 32 CAPSEEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVG 91
C +E + +V YN++ G L + +DM+ ++PN TF L+ G
Sbjct: 206 CKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKG 265
Query: 92 TMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPN 151
+A + M+ G P + Y L+S GK D+A +L EMK +KP+
Sbjct: 266 LCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPD 325
Query: 152 VRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
V Y L++ + R+ ++ +M G N Y +I
Sbjct: 326 VVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYD---DMMLDGVKPNRDTFHSLVVGTMRGS 96
KR +A NV +N + L RN A +M + + P+ ++++++ G G
Sbjct: 135 KRGFAFNVYNHNILLKGLC---RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
++ A N+MK G + + LI K+ D+A+ L+EMKFM ++ ++ Y
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 157 CLLHACAADGRLDRVNAIVRDMTAAG 182
L+ G LDR A+ ++ G
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERG 277
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 81 NRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 140
N DT+ +++ G + + A L +M++ L P V YN L+S+ K + DQA ++
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 141 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
EEM+ P+V ++ ++ G + +++ M+ AGL + F Y+ LI
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D M+ G +P+ T+ ++V G + A LN+M+ + +V +Y+ +I + K
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
++ D A+ + EM+ V+PNV TY L+ GR + ++ DM + N +
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 191 AGLIVAHKNK 200
+ LI A K
Sbjct: 327 SALIDAFVKK 336
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE KR+ N+ Y+++ R + + M+ PN T+++L+ G +
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+ +M GLV + Y LI ++++ D A + ++M + V PN+ TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 156 ICLLHACAADGRLDR 170
LL +G+L +
Sbjct: 467 NILLDGLCKNGKLAK 481
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
Y++M+ + PN T+ SL+ G R+ +A L M +P+V YN LI+ K
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+K D+ +++ EM + N TY L+H D + + M + G+ N
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 190 YAGLIVAHKNKTPVTDDFAAKVIEFVERSKI 220
Y L+ + A V E+++RS +
Sbjct: 466 YNILLDGLCKNGKLAK--AMVVFEYLQRSTM 494
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%)
Query: 44 ANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
++N+ YN + R L MM G +P+ T +SL+ G G+R+ DA
Sbjct: 110 SHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVA 169
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
++QM MG PD + LI + +A+ +++ M +P++ TY +++
Sbjct: 170 LVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G D ++ M AA + N Y+ +I
Sbjct: 230 KRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 62 RNFLLRDA---YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVT 118
R +RDA +D+M+ GV+ N +SL+ G + ++ +A ++M L PD
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 119 LYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 178
YN L+ ++ D+A+++ ++M EV P V TY LL + G V ++ + M
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 179 TAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKIWSSVEANSANAENVMMGV 238
G+ ++ + L+ A K+ +F E K+W +V A + + + V
Sbjct: 463 LKRGVNADEISCSTLLEA-----------LFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 59/120 (49%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST 126
++ D++ + KP T+ +L G + +++AF M+ G+ P + +YN LIS
Sbjct: 526 KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 186
K ++ ++ ++ E++ + P V TY L+ G +D+ A +M G+ LN
Sbjct: 586 AFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN 645
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAF-YFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQ 138
PN ++ + G + +++DA F + + +PD Y LI C + + ++A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 139 ILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ +EM + PN+ TY L+ G +DR ++ + G+ N Y LI
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 45 NNVSEYNTVFGSLTAQRRNFLLRDAYDDMML-DGVKPNRDTFHSLVVGTMRGSRMQDAFY 103
NN+ YN L + R + D++ D P+ T+ L+ G + AF
Sbjct: 718 NNIV-YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 104 FLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
++M + G++P++ YN LI K N D+A ++L ++ + PN TY L+
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 164 ADGRLDRVNAIVRDMTAAGL 183
G + + M GL
Sbjct: 837 KSGNVAEAMRLKEKMIEKGL 856
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 46 NVSEYNTVFGSLTA----QRRNFLLRDAYDDMMLDGVKPNRDTFHSLVV-------GTMR 94
+V YNT+ +L ++ FLL D M L G + DT+ ++ G
Sbjct: 199 DVYAYNTIINALCRVGNFKKARFLL----DQMQLPGFRYPPDTYTYTILISSYCRYGMQT 254
Query: 95 GSR------MQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEV 148
G R M +A +M G VPDV YN LI C K+ +A+++ E+MK
Sbjct: 255 GCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGC 314
Query: 149 KPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGL 185
PN TY + + ++ ++R M G G+
Sbjct: 315 VPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 2/162 (1%)
Query: 31 FCAPSEEYYKRNYANNVSEYNTVFGSLTA-QRRNFLLRDAYDDMMLDGVKPNRDTFHSLV 89
F P + Y ++ Y G A +RR + + +M+ G P+ T++ L+
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 90 VGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFM-EV 148
G + +R+ A MK G VP+ YN I + + AI+++ MK +
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 149 KPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
P TY L+HA R +V +M AGL ++ Y
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTY 392
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 79 KPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGL--VPDVTLYNFLIST---------C 127
KP+ +++++ R + A + L+QM++ G PD Y LIS+ C
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 128 GKS--KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGL 185
K+ + +A ++ EM F P+V TY CL+ C R+ R + DM G
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 186 NKFCYAGLI 194
N+ Y I
Sbjct: 317 NQVTYNSFI 325
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 43 YANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGV--KPNRDTFHSLVVGTMRGSRMQD 100
+ N V+E L A+++ + +D M+ + +P T+ L+V + +
Sbjct: 87 WVNTVTE---TLSDLIAKKQWLQALEVFD-MLREQTFYQPKEGTYMKLLVLLGKSGQPNR 142
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK-FMEVKPNVRTYICLL 159
A ++M GL P V LY L++ +S D A IL++MK F + +P+V TY LL
Sbjct: 143 AQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
Query: 160 HACAADGRLDRVNAIVRDM 178
AC + D V+++ ++M
Sbjct: 203 KACVDASQFDLVDSLYKEM 221
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLV-PDVTLYNFLISTCG 128
+D+M+ +G++P + + +L+ R + + DAF L++MK PDV Y+ L+ C
Sbjct: 147 FDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACV 206
Query: 129 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 178
+ D + +EM + PN T +L GR D++ ++ DM
Sbjct: 207 DASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM 256
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 30 FFCAPSEEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLV 89
F C +E KR V EYN + + + + ++ MM GV P++ T+++LV
Sbjct: 494 FICC--QEVNKRT----VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLV 547
Query: 90 VGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVK 149
+L +M+ G V D Y +IS+ K + A ++ +EM ++
Sbjct: 548 QILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIE 607
Query: 150 PNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
P+V Y L++A A G + + + V M AG+ N Y LI
Sbjct: 608 PDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI 652
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%)
Query: 51 NTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKI 110
+ SL QR + + M+ GV N ++ LV + + A L++M+
Sbjct: 172 TVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEE 231
Query: 111 MGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDR 170
G+ PD+ YN LIS K +A+ + + M+ V PN+ TY +H + +GR+
Sbjct: 232 KGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMRE 291
Query: 171 VNAIVRDM 178
+ R++
Sbjct: 292 ATRLFREI 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
++ YNT+ + +F D M GV PN T++S + G R RM++A
Sbjct: 237 DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF 296
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
++K VT Y LI + + D+A+++ E M+ P V TY +L D
Sbjct: 297 REIKDDVTANHVT-YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCED 355
Query: 166 GRLDRVNAIVRDMTA 180
GR+ N ++ +M+
Sbjct: 356 GRIREANRLLTEMSG 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%)
Query: 85 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMK 144
F L++ + + D+ Q++ GL P + L+++ K + +D +I ++M
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 145 FMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKT 201
+ V N+ Y L+HAC+ G ++ ++ +M G+ + F Y LI + K+
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 57 LTAQRRNFLLRDA--YDDMMLD-GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGL 113
LTA N L+ A Y M+D G KPN F SL+ G + ++ AF L +M G
Sbjct: 259 LTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318
Query: 114 VPDVTLYNFLISTCGKSKNSDQAIQI-LEEMKFMEVKPNVRTYICLLHACAADGRLDRVN 172
P+V + LI K +++A ++ L+ ++ KPNV TY ++ + +L+R
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Query: 173 AIVRDMTAAGLGLNKFCYAGLIVAH 197
+ M GL N Y LI H
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGH 403
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 61/127 (48%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
+ +D+M + GV P+ ++ +V+G R ++Q+A +L M G +PD +++
Sbjct: 203 NVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 262
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
++ ++AI +M + KPN+ + L+ G + + ++ +M G N
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
Query: 188 FCYAGLI 194
+ + LI
Sbjct: 323 YTHTALI 329
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D M+ G +P+ T+ ++V G + + A L +M+ + DV +YN +I K
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
K+ D A+ + EM ++P+V TY L+ GR + ++ DM + N +
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Query: 191 AGLIVA 196
+ LI A
Sbjct: 332 SALIDA 337
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 63/135 (46%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E KR+ ++ Y+++ R + ++ M+ PN T+ +L+ G +
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
R+++ +M GLV + Y LI ++++ D A + ++M + V PN+ TY
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 156 ICLLHACAADGRLDR 170
LL +G+L +
Sbjct: 472 NILLDGLCKNGKLAK 486
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
++ +R ++ Y TV L + L M ++ + +++++ G +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEMKFMEVKPNVRT 154
M DA +M G+ PDV Y+ LIS C + SD A ++L +M ++ PNV T
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD-ASRLLSDMIERKINPNVVT 330
Query: 155 YICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ L+ A +G+L + +M + + F Y+ LI
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 2/181 (1%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
+R NV ++ + + + + YD+M+ + P+ T+ SL+ G R+
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
+A + M P+V Y+ LI K+K ++ +++ EM + N TY L+
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 160 HACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSK 219
H D + + M + G+ N Y L+ + A V E+++RS
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK--AMVVFEYLQRST 498
Query: 220 I 220
+
Sbjct: 499 M 499
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 66/139 (47%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ YN + L + ++ + ++P+ T++ ++ G + +++D +
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ + G+ P+V YN +IS + + ++A +L++MK PN TY L+ A D
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 166 GRLDRVNAIVRDMTAAGLG 184
G + ++++M + G
Sbjct: 587 GDREASAELIKEMRSCGFA 605
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D M+ G KP+ TF +L+ G ++ +A ++QM G PD+ Y +++ K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
+ D A+ +L++M+ +++ +V Y ++ +D + +M G+ + F Y
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 191 AGLI 194
+ LI
Sbjct: 297 SSLI 300
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 66 LRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIS 125
L AY+ + G ++ ++ + R+++++ L +MK GL PDV+LYN LI
Sbjct: 381 LIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIE 440
Query: 126 TCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGL 185
C K++ A ++ +EM K N+ TY L+ + +G + + M G+
Sbjct: 441 ACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEP 500
Query: 186 NKFCYAGLI 194
++ Y LI
Sbjct: 501 DETIYMSLI 509
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
D + M +G +P+ T+++LV R R+++AFY M +VPD+ Y LI
Sbjct: 257 DFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGL 316
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
K +A Q M +KP+ +Y L++A +G + + ++ +M + ++
Sbjct: 317 CKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDR 376
Query: 188 F 188
F
Sbjct: 377 F 377
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 18/174 (10%)
Query: 69 AYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 128
Y M G+ PN TF+ L S ++ FL +M+ G PD+ YN L+S+
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 129 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 188
+ +A + + M V P++ TY L+ DGR+ + M G+ +
Sbjct: 283 RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 189 CYAGLIVAHKNK----------------TPVTDDFAAKVI--EFVERSKIWSSV 224
Y LI A+ + + V D F KVI FV ++ S+V
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
R + YNT+ + + ++ + +M+ V+P+ ++ L+ G +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
A +++ + D+ +YN +I + D A + + VKP+V+TY ++
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 161 ACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKI 220
G L + + R M G N Y LI AH + T +AK+IE ++R
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK--SAKLIEEIKRCGF 593
Query: 221 WSSVEANSAN 230
SV+A++
Sbjct: 594 --SVDASTVK 601
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
+E +R + + Y ++ + + D M+ G PN TF+ L+ G +
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+ + D +M + G+V D YN LI + + A ++ +EM V+P++ +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD 205
LL +G ++ I + + + L+ Y +I N + V D
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V N++ GS R + Y L GV+P+ TF+ L++ + + +
Sbjct: 285 DVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVM 344
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+ M+ YN +I T GK+ ++ + +MK+ VKPN TY L++A +
Sbjct: 345 DFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKA 404
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
G + ++++++R + + + L+ + +I A+
Sbjct: 405 GLVVKIDSVLRQIVNSDVVLDTPFFNCIINAY 436
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK-IMGLVPDVTLYNFLISTCG 128
++ M+ +G+KP D + SL+ + + AF L MK + PDV + LIS C
Sbjct: 167 FEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCC 226
Query: 129 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 188
K D I+ EM ++ V + TY ++ G + + +++ DM G L
Sbjct: 227 KLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDV 286
Query: 189 CYAGLIVA 196
C I+
Sbjct: 287 CTLNSIIG 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 72 DMMLDGVK-PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
DM+ DG P+ T +S++ G M+ + ++ ++MG+ PD+T +N LI + GK+
Sbjct: 275 DMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKA 334
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
+ +++ M+ TY ++ GR+++++ + R M G+ N Y
Sbjct: 335 GMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITY 394
Query: 191 AGLIVAH 197
L+ A+
Sbjct: 395 CSLVNAY 401
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST 126
R + M+ GV + T++SL+ + ++ +QM+ + PDV Y LI
Sbjct: 267 RKVFSSMVGKGVPQSTVTYNSLMSFE---TSYKEVSKIYDQMQRSDIQPDVVSYALLIKA 323
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 186
G+++ ++A+ + EEM V+P + Y LL A A G +++ + + M + +
Sbjct: 324 YGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 383
Query: 187 KFCYAGLIVAHKNKT 201
+ Y ++ A+ N +
Sbjct: 384 LWSYTTMLSAYVNAS 398
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 35/195 (17%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVG-TMRG 95
E K N + N+ + + L + R + +DDM G+ PNR T+ L+ G RG
Sbjct: 188 EMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRG 247
Query: 96 S----------------------------------RMQDAFYFLNQMKIMGLVPDVTLYN 121
S RM +AF L + G V + Y+
Sbjct: 248 SADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYS 307
Query: 122 FLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAA 181
LI +++ QA ++ M +KP++ Y L+ + G+++ ++ M +
Sbjct: 308 SLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK 367
Query: 182 GLGLNKFCYAGLIVA 196
G+ + +CY +I A
Sbjct: 368 GISPDTYCYNAVIKA 382
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 36/175 (20%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
K+ N+ NT+ SL + L+ Y + G KP+ T+++L+ + +R +
Sbjct: 312 KKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYE 371
Query: 100 D------------------------------------AFYFLNQMKIMGLVPDVTLYNFL 123
D A L +M+ GL + YN +
Sbjct: 372 DVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLV 431
Query: 124 ISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 178
IS C KS+ S A+ + E M + KPN TY+ L+ +C D V I++ +
Sbjct: 432 ISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKV 486
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 81 NRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQIL 140
N +++S++ + + DA L++M+I GL PD+ +N L+S S AI +L
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 141 EEMKFMEVKPNVRTYICLLHACAADGRLDRVNAI 174
+ M+ +KP+ + LL A A G L AI
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 44 ANNVSEYNTVFGSLTAQRRNFLLRDAYDDMML----DGVKPNRDTFHSLVVGTMRGSRMQ 99
A N+ +N++ L+ LL+DA + +M+ +G+KP+ T++SL G + +
Sbjct: 288 AKNIVAWNSLVSGLSYA---CLLKDA-EALMIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLL 159
A + +MK G+ P+V + + S C K+ N A+++ +M+ V PN T LL
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 67 RDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST 126
R + M+ GV + T++SL+ + ++ +QM+ + PDV Y LI
Sbjct: 274 RKVFSSMVGKGVPQSTVTYNSLMSFE---TSYKEVSKIYDQMQRSDIQPDVVSYALLIKA 330
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN 186
G+++ ++A+ + EEM V+P + Y LL A A G +++ + + M + +
Sbjct: 331 YGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 390
Query: 187 KFCYAGLIVAHKNKT 201
+ Y ++ A+ N +
Sbjct: 391 LWSYTTMLSAYVNAS 405
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 42 NYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDA 101
N NV Y + +L + + + M G+KP+ + L+ G + +A
Sbjct: 255 NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEA 314
Query: 102 FYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHA 161
L M GL+P+V YN LI K KN +A+ +L +M + P++ TY L+
Sbjct: 315 SGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAG 373
Query: 162 CAADGRLDRVNAIVRDMTAAGLGLNK 187
+ G LD ++ M +GL N+
Sbjct: 374 QCSSGNLDSAYRLLSLMEESGLVPNQ 399
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 69 AYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI-STC 127
+ +M +G N ++ L+ G ++ +A L +MK P+V Y LI + C
Sbjct: 212 VFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALC 271
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
G + S +A+ + ++M +KP+ Y L+ + + LD + ++ M GL N
Sbjct: 272 GSGQKS-EAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNV 330
Query: 188 FCYAGLI 194
Y LI
Sbjct: 331 ITYNALI 337
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G P+ T+ S + G R + AF +M G + Y LI ++K D+A
Sbjct: 185 GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+ +L +MK PNVRTY L+ A G+ + + M+ +G+ + Y LI
Sbjct: 245 LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
D ++ M+ G PN T+ SL+ G + + +AF L++++ GL PD+ L N +I T
Sbjct: 268 DLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTY 327
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 178
+ ++A ++ ++ ++ P+ T+ +L + G+ D V I +
Sbjct: 328 TRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
+M G+KPN +F ++ G + + L MK G+ V+ YN I + K K
Sbjct: 212 EMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRK 271
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
S +A +L+ M +KPN TY L+H + + + + M G + CY
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYF 331
Query: 192 GLI 194
LI
Sbjct: 332 TLI 334
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%)
Query: 68 DAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTC 127
+ + D+ +G P+ +H L+ + R +A N+M GL P V YN +I
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 128 GKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 167
K D+ + + M E P+V TY L+H A GR
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGR 699
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN + G+L + +DM L G P+ T+++++ + A F
Sbjct: 177 YNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQL 236
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
G P + Y L+ + S +AI++LE+M P++ TY L++ G L+
Sbjct: 237 QNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLE 296
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLI 194
V ++++ + + GL LN Y L+
Sbjct: 297 EVASVIQHILSHGLELNTVTYNTLL 321
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
DDM+ G P+R ++ +L+ R +++++A+ L +MK+ G PD+ YN +I +
Sbjct: 249 DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE 308
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGL 183
+ A ++L++M PN +Y L+ G D + +M + G
Sbjct: 309 DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%)
Query: 37 EYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGS 96
E K +V Y T+ +L R + ++ M+L G KPN TF+ + +
Sbjct: 202 EMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRR 261
Query: 97 RMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYI 156
R DA L M + + PD YN +I ++ D A ++ M KPN++ Y
Sbjct: 262 RAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQ 321
Query: 157 CLLHACAADGRLDRVNAIVRD 177
++H G D + +D
Sbjct: 322 TMIHYLCKAGNFDLAYTMCKD 342
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 62/120 (51%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
D M +G PN + +L+ G + ++Q+A +++K GL D Y L++ ++
Sbjct: 292 DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRN 351
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
+D+A+++L EMK + + TY +L +++GR + ++ + G+ LNK Y
Sbjct: 352 GETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSY 411
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 42 NYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMML-DGVKPNRDTFHSLVVGTMRGSRMQD 100
+Y N+++ Y+T+ L A R+ + ++DM+ +G+ P+ TF+ ++ G R ++
Sbjct: 228 SYPNSIT-YSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 101 AFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLH 160
A L+ MK G P+V Y+ L++ K +A Q +E+K +K + Y L++
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 161 ACAADGRLDRVNAIVRDMTAA 181
+G D ++ +M A+
Sbjct: 347 CFCRNGETDEAMKLLGEMKAS 367
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNF-LLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRM 98
K +++ V YNT+ S+ + RN ++ + +M +G + T+ L+ + ++
Sbjct: 182 KDGFSHRVGIYNTML-SIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240
Query: 99 QDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICL 158
+M+ G D T YN +I + + D A++ +EM + +RTY L
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
Query: 159 LHACAADGRLDRVNAIVRDMT---------AAGLGLNKFCYAGLI 194
L A ++D V +I DM A G L FC +G I
Sbjct: 301 LDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKI 345
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 41 RNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQD 100
R N +N + +L RR + M G +P+ +T+ L+ + +R+ +
Sbjct: 316 RGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGE 375
Query: 101 AFYFLNQMKIMG---LVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYIC 157
+++MK G L+ Y FL CG + + A+ + + MK KP ++TY
Sbjct: 376 GDEMIDKMKSAGYGELLNKKEYYGFLKILCGIER-LEHAMSVFKSMKANGCKPGIKTYDL 434
Query: 158 LLHACAADGRLDRVNAIVRDMTAAGLGLN 186
L+ A+ +L R N + ++ G+ ++
Sbjct: 435 LMGKMCANNQLTRANGLYKEAAKKGIAVS 463
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 69 AYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCG 128
+D++ ++P +F++L+ G + + + F +QM+ PDV Y+ LI+
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 129 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG---- 184
K D A + +EM + PN + L+H + +G +D + + M + GL
Sbjct: 322 KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIV 381
Query: 185 -----LNKFCYAGLIVAHKN 199
+N FC G +VA +N
Sbjct: 382 LYNTLVNGFCKNGDLVAARN 401
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V Y+ + +L + + +D+M G+ PN F +L+ G R +
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSD--QAIQILEEMKFMEVKPNVRTYICLLHACA 163
+M GL PD+ LYN L++ G KN D A I++ M ++P+ TY L+
Sbjct: 369 QKMLSKGLQPDIVLYNTLVN--GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 164 ADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTD 205
G ++ I ++M G+ L++ ++ L+ + V D
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 72 DMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
+M +G++ +R F +LV G + R+ DA L +M G+ PD Y ++ K
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYA 191
++ ++L+EM+ P+V TY LL+ G++ + ++ M G+ + Y
Sbjct: 500 DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYN 559
Query: 192 GLIVAH 197
L+ H
Sbjct: 560 TLLEGH 565
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 69 AYDDM--MLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST 126
A+D M ++DG KPN ++++V G ++ M A F +M PDV +N LI+
Sbjct: 179 AFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILING 237
Query: 127 CGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAG 182
+S D A+ + EMK +PNV ++ L+ + G+++ + +M G
Sbjct: 238 YCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLD-GVKPNRDTFHSLVVGTMR 94
+E +++ + YN + L + ++ + D+M D VKP+ +F L+
Sbjct: 183 KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN 242
Query: 95 GSRMQDAFYFLNQMKIMGLVPDVTLYNFLIST-CGKSKNSDQAIQILEEMKFMEVKPNVR 153
+++A Y ++++ G PD LYN ++ C SK S +A+ + ++MK V+P+
Sbjct: 243 SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS-EAVGVYKKMKEEGVEPDQI 301
Query: 154 TYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
TY L+ + GR++ ++ M AG + Y L+
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
DDM+ G+ P TF+ LV G + M A +M G PDV + LI +
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
Q ++ EEM + PN TY L++A + RL + ++ + + + F Y
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY 420
Query: 191 AGLIVAHKNKTPVTDDF--AAKVIE 213
PV D F A KV E
Sbjct: 421 ----------NPVIDGFCKAGKVNE 435
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+++M G+ PN T+ L+ +R+ A L Q+ ++P +YN +I K
Sbjct: 370 WEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+ ++A I+EEM+ + KP+ T+ L+ GR+ +I M A G +K
Sbjct: 430 AGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Query: 190 YAGLI 194
+ L+
Sbjct: 490 VSSLL 494
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Query: 71 DDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
DDM+ G+ P TF+ LV G + M A +M G PDV + LI +
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
Q ++ EEM + PN TY L++A + RL + ++ + + + F Y
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY 420
Query: 191 AGLIVAHKNKTPVTDDF--AAKVIE 213
PV D F A KV E
Sbjct: 421 ----------NPVIDGFCKAGKVNE 435
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGK 129
+++M G+ PN T+ L+ +R+ A L Q+ ++P +YN +I K
Sbjct: 370 WEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Query: 130 SKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFC 189
+ ++A I+EEM+ + KP+ T+ L+ GR+ +I M A G +K
Sbjct: 430 AGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Query: 190 YAGLI 194
+ L+
Sbjct: 490 VSSLL 494
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 59/108 (54%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M+ +GV+PN T+ +++ G + ++++AF N++ +G+ D LY LI + N
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN 362
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTA 180
++A +L +M+ ++P++ TY +++ GR+ + + + +
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG 410
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
N+ Y T+ +L + +RD + +G + + + + + G +G + DA
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M G+ DV Y+ LI K N ++A+ +L +M V+PN+ TY ++
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
G+L+ + + + G+ +++F Y LI
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
E+ K ++ + +Y V L R + + M D V+P+ + ++ G +
Sbjct: 240 EDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIAD 299
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
A +++ ++GL PDV YN I+ K + + A++++ M + +PNV TY
Sbjct: 300 EDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTY 359
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH 197
L+ A G L R + ++M G+ N + +I A+
Sbjct: 360 NILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 11/170 (6%)
Query: 36 EEYYKRNYANNVSEYNTV---FGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGT 92
+E R + + VS Y+T+ F + R+ + L +++M G+ N T+ SL+
Sbjct: 315 KEMEPRGFCDVVS-YSTLIETFCRASNTRKAYRL---FEEMRQKGMVMNVVTYTSLIKAF 370
Query: 93 MRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNV 152
+R A L+QM +GL PD Y ++ KS N D+A + +M E+ P+
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 153 RTYICLLHACAADGRLDRVNAIVRDMTAAGLGLN----KFCYAGLIVAHK 198
+Y L+ GR+ + DM + KF GLI K
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKK 480
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%)
Query: 36 EEYYKRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRG 95
EE ++ NV Y ++ + + + + + D M G+ P+R + +++ +
Sbjct: 349 EEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKS 408
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+ A+ N M + PD YN LIS +S +AI++ E+MK E P+ T+
Sbjct: 409 GNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTF 468
Query: 156 ICLLHACAADGRLDRVNAIVRDMTAAGLGLNK 187
++ +L + M G L++
Sbjct: 469 KFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDR 500
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 76 DGVKPNRDTFHSLV----VGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSK 131
G PN T H L+ + RGS Q +N+MK++G PD N+L+S+
Sbjct: 129 SGCLPNPQT-HLLLSDAWLERRRGS--QSVADIINEMKLIGYSPDTGTCNYLVSSLCAVD 185
Query: 132 NSDQAIQILEEMKFMEVKPNVRTYICLLHA-CAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
D+AI+++EEM P+V +Y ++++ C A D V + ++ AG+ K
Sbjct: 186 KLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGML 245
Query: 191 AGLIVAHKNKTPVTDDFAAKVIEFVE 216
+ A + + A ++IEFVE
Sbjct: 246 TKVAAALRANREIWK--AIEMIEFVE 269
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAF-YF 104
N ++ + G Q + +++M+ KPN TF S++ + + YF
Sbjct: 510 NTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYF 569
Query: 105 LNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAA 164
+ K P Y ++ ++ +QA+ I+E+M ++P+VR + LH C
Sbjct: 570 SSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP---IQPDVRCFGAFLHGCGM 626
Query: 165 DGRLDRVNAIVRDM 178
R D +++ M
Sbjct: 627 HSRFDLGEIVIKKM 640
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 72 DMMLDGVKPNRDTFHSLVV-GTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
DM+ G + N S+++ G + R+ +A NQMK GL PD+ Y+ +I K
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
D A+ + +EM + PN RT+ LL G L +++ + ++G L+ Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 55/116 (47%)
Query: 40 KRNYANNVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQ 99
K + + + Y + L + + + +DD++ + + + + + G + +
Sbjct: 547 KASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLS 606
Query: 100 DAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
DA +FL + G +P+V YN +I+ C +S +A QILEEM+ P+ T+
Sbjct: 607 DACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW 662
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 139
P+ DT+ +V + + AF ++ M+ +GL P V +Y+ +I + GK +A +
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 140 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+M ++P+ Y+ +++ A +GR+D N +V ++ L + F Y LI
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 85 FHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYN-FLISTC--GKSKNSDQAIQILE 141
FH ++ + +R+++A+ + M+ + DVT YN FL S C G + + ++ +E
Sbjct: 163 FHPILNTLTKKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKME 222
Query: 142 EMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKT 201
E + + P+ RTY L+ GR++ AI+R M GL + YA AH
Sbjct: 223 EEEEGVMSPDTRTYDALVLGACKSGRVEAAMAILRRMEEEGLSV---LYA--THAHVIGE 277
Query: 202 PVTDDFAAKVIEFV 215
V + A +EFV
Sbjct: 278 MVESGYYALSVEFV 291
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQM-KIMGLVPDVTLYNFLISTCG 128
YDDM+ GVKPN TF L+ ++ M K G+ P + Y L+ G
Sbjct: 327 YDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLG 386
Query: 129 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGR 167
+S D+A ++ M F P+ T+ LL AC GR
Sbjct: 387 RSGLLDEAENLIHTMPF---PPDEPTWAALLSACKRQGR 422
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 77 GVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQA 136
G+KP+ T++SL+ + ++ A+ +++M+ PDV Y +I G D+A
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 137 IQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
++L+EMK P+V Y + RL + +V +M GL N Y
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 72 DMMLDGVKPNRDTFHSLVV-GTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKS 130
DM+ G + N S+++ G + R+ +A NQMK GL PD+ Y+ +I K
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 131 KNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCY 190
D A+ + +EM + PN RT+ LL G L +++ + ++G L+ Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 39 YKRNYANNVSEYNTVFGSLTAQRRNFLLRDA---YDDMMLDGVKPNRDTFHSLVVGTMRG 95
+ R +V +N++ LTA ++ ++A +++M G++PN +F S++
Sbjct: 320 FDRLAKRDVVSWNSL---LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
Query: 96 SRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+ + +++ MK G+VP+ Y ++ G++ + ++A++ +EEM ++P +
Sbjct: 377 GLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTAAIW 433
Query: 156 ICLLHAC 162
LL+AC
Sbjct: 434 KALLNAC 440
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLD-GVKPNRDTFHSLVVGTMRGSRMQDAFYF 104
+V NT+ L +R L+ + + G+ PN T + LV + + ++ A+
Sbjct: 154 SVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKV 213
Query: 105 LNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAA 164
L+++ MGLVP++ Y ++ + + A ++LEEM P+ TY L+
Sbjct: 214 LDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCK 273
Query: 165 DGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
GR ++ DM + N+ Y +I A
Sbjct: 274 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 37 EYYKRNYANNVSEYNTV---FGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTM 93
+ KR ++ Y+++ F R F L Y+DM+ G P+ + LV G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL---YEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 94 RGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVR 153
+ M A F +M + +V ++N LI + D+A+++ M +KP+V
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 154 TYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLIVAH-KNKTPVTDDFAAKVI 212
T+ ++ +GRL+ + M GL + Y LI A K+ P ++
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT---IGLQLF 589
Query: 213 EFVERSKIWSSV 224
+ ++R+KI + +
Sbjct: 590 DLMQRNKISADI 601
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+ S YN + SL + + + D + +M+ +GV PN T+ +V + ++A
Sbjct: 257 STSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAF 316
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYIC 157
+MK +G VP+ Y+ +IS K+ + ++AI + E+M+ + P+ Y C
Sbjct: 317 GEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPS--NYTC 366
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 2/171 (1%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YNT+ ++ + + Y+ M GV + T+++++ RG ++ A + +
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
GL D +Y +I GK +A+ + EM+ +KP +Y ++ CA
Sbjct: 837 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHH 896
Query: 170 RVNAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDDFAAKVIEFVERSKI 220
V+ +++ M G + Y LI + + + A K I V+ I
Sbjct: 897 EVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAE--AEKTITLVKEKGI 945
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 54/107 (50%)
Query: 78 VKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAI 137
+ PN+D++ ++ + + D+ ++MK GL P + +YN L+ + D+A+
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAM 349
Query: 138 QILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLG 184
++++++ +KP+ TY ++ G+LD ++ M + L
Sbjct: 350 KLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLS 396
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN++ L + + R+ M+ + + P DTFH+ + + L QMK
Sbjct: 367 YNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAF----LEAVNFEKTLEVLGQMK 422
Query: 110 IMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
I L P + ++ K K + A++I EM E+ N Y+ + + G L+
Sbjct: 423 ISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLE 482
Query: 170 RVNAIVRDMTAAGL 183
+ I +M + G
Sbjct: 483 KAREIYSEMKSKGF 496
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M++ G +P+ T+ +++ G + A LN+M+ + DV +YN +I K K+
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDM 178
D A + +M+ +KP+V TY L+ GR + ++ DM
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 1/150 (0%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V YNT+ L + D ++ M G+KP+ T++ L+ R DA L
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEM-KFMEVKPNVRTYICLLHACAA 164
+ M + PD+ +N LI K +A ++ +EM K P+V Y L+
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 165 DGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
R++ + R+M+ GL N Y LI
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 70 YDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQM-KIMGLVPDVTLYNFLISTCG 128
+D+M+ VKP TF +L+ G + SR+++A + M K+ G+ P V +Y LI
Sbjct: 175 FDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALC 234
Query: 129 KSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKF 188
+ A ++ +E ++K + Y L+ + GR + V+ I+ +M+ G +
Sbjct: 235 QIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTV 294
Query: 189 CYAGLI 194
Y LI
Sbjct: 295 TYNVLI 300
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 139
PN T++ L+ G R +++ A +++MK + P+V N ++ + + A+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 140 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+M+ VK NV TY+ L+HAC + +++ M AG + Y LI
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YNT+ + + + M DG+ P T+ +++ + +A M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 110 IMGLV-PDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+ V P+ +YN LI+ K N QA+ + EEMK V+PNV TY
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 139
PN T++ L+ G R +++ A +++MK + P+V N ++ + + A+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 140 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+M+ VK NV TY+ L+HAC + +++ M AG + Y LI
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YNT+ + + + M DG+ P T+ +++ + +A M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 110 IMGLV-PDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+ V P+ +YN LI+ K N QA+ + EEMK V+PNV TY
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 80 PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQI 139
PN T++ L+ G R +++ A +++MK + P+V N ++ + + A+
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 140 LEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
+M+ VK NV TY+ L+HAC + +++ M AG + Y LI
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YNT+ + + + M DG+ P T+ +++ + +A M
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 110 IMGLV-PDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTY 155
+ V P+ +YN LI+ K N QA+ + EEMK V+PNV TY
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 67/180 (37%), Gaps = 35/180 (19%)
Query: 50 YNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMK 109
YN + +R + +M+ G+ PN T+++++ G R +++ A+ F +MK
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK 257
Query: 110 IM-----------------------------------GLVPDVTLYNFLISTCGKSKNSD 134
G++P V YN +I K N +
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVE 317
Query: 135 QAIQILEEMKFMEVKPNVRTYICLLHACAADGRLDRVNAIVRDMTAAGLGLNKFCYAGLI 194
A+ + EEM +PNV TY L+ G R +++ M G N Y +I
Sbjct: 318 NAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 52/91 (57%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M L+GV PN T++ +++ +R ++ +A QM+ G++P++ + +++ ++
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 133 SDQAIQILEEMKFMEVKPNVRTYICLLHACA 163
S++AI L +M+ ++PN + L ACA
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACA 557
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 68 DAYDDMMLDGVK---PNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLI 124
D +D M+ G P TF ++V + + ++ F + +M G +PDV+ Y +I
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 125 STCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAADGRLD 169
++ D+A + L+EM P++ TY C L + + D
Sbjct: 384 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTD 428
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 73 MMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFLNQMKIMGLVPDVTLYNFLISTCGKSKN 132
M+ G P+ T+ ++ G ++ +A+ FL++M G PD+ YN + +++
Sbjct: 367 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 426
Query: 133 SDQAIQILEEMKFMEVKPNVRTY 155
+D+A+++ M P+V+TY
Sbjct: 427 TDEALKLYGRMVESRCAPSVQTY 449
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 69/151 (45%)
Query: 46 NVSEYNTVFGSLTAQRRNFLLRDAYDDMMLDGVKPNRDTFHSLVVGTMRGSRMQDAFYFL 105
+V+ YNT+ L + D++ G+KP+ TF+ L+ + + ++
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 106 NQMKIMGLVPDVTLYNFLISTCGKSKNSDQAIQILEEMKFMEVKPNVRTYICLLHACAAD 165
+M + D+ YN + S++ + + +++K E+KP+V T+ ++ ++
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 166 GRLDRVNAIVRDMTAAGLGLNKFCYAGLIVA 196
G+LD +++ G KF + L+ A
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFVFNSLLPA 326