Miyakogusa Predicted Gene

Lj0g3v0072049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0072049.1 Non Chatacterized Hit- tr|F6HBG5|F6HBG5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,63.64,0.000000000000004, ,CUFF.3542.1
         (83 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32605.1 | Symbols:  | Mitochondrial glycoprotein family prot...    74   2e-14

>AT4G32605.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr4:15726429-15727864 REVERSE LENGTH=227
          Length = 227

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 3/66 (4%)

Query: 17  FSIVKGALD-SNGPVLKRSYGEEEVIVYVMRLSSADD--DDGAVGQLFIHVDVSKPTQNE 73
           F IVKG+L+ S G VLK+S G EE+ ++VMRL+   D  DDG + QLF+HV VSKP Q +
Sbjct: 66  FEIVKGSLEGSTGAVLKKSVGNEEINLFVMRLAHGGDEEDDGGINQLFLHVAVSKPNQPD 125

Query: 74  SLIFLC 79
           SL FLC
Sbjct: 126 SLHFLC 131