Miyakogusa Predicted Gene
- Lj0g3v0071389.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0071389.1 tr|A9T8E9|A9T8E9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_192620,26.12,2e-18,seg,NULL; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; no
description,Tetratricope,CUFF.3494.1
(314 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 7e-99
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 205 3e-53
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 196 2e-50
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 191 4e-49
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 1e-47
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 7e-47
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 2e-46
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 6e-46
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 1e-45
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 178 3e-45
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 178 4e-45
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 6e-45
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 1e-44
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 2e-44
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 4e-44
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 5e-44
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 6e-44
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 7e-44
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 174 8e-44
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 8e-44
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 173 1e-43
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 2e-43
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 172 4e-43
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 8e-43
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 169 2e-42
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 4e-42
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 168 4e-42
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 4e-42
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 8e-42
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 8e-42
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 166 1e-41
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 166 3e-41
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 3e-41
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 4e-41
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 164 5e-41
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 8e-41
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 2e-40
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 2e-40
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 3e-40
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 162 3e-40
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 5e-40
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 5e-40
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 6e-40
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 7e-40
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 8e-40
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 9e-40
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 159 2e-39
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 3e-39
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 4e-39
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 4e-39
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 4e-39
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 157 6e-39
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 7e-39
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 7e-39
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 8e-39
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 1e-38
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 156 2e-38
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 155 3e-38
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 4e-38
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 4e-38
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 5e-38
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 8e-38
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 9e-38
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 1e-37
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 1e-37
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 1e-37
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 1e-37
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 1e-37
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 1e-37
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 1e-37
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 2e-37
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 2e-37
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 2e-37
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 152 3e-37
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 152 3e-37
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 5e-37
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 151 6e-37
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 7e-37
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 150 7e-37
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 7e-37
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 150 1e-36
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 1e-36
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 2e-36
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 2e-36
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 4e-36
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 4e-36
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 4e-36
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 148 6e-36
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 6e-36
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 6e-36
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 8e-36
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 9e-36
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 9e-36
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 2e-35
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 3e-35
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 3e-35
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 3e-35
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 5e-35
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 8e-35
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 8e-35
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 144 1e-34
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 143 1e-34
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 1e-34
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 142 2e-34
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 2e-34
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 3e-34
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 6e-34
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 7e-34
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 7e-34
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 7e-34
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 9e-34
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 139 2e-33
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 3e-33
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 139 3e-33
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 7e-33
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 137 7e-33
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 1e-32
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 3e-32
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 4e-32
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 1e-31
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 1e-31
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 132 2e-31
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 2e-31
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 5e-31
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 131 7e-31
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 130 1e-30
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 2e-30
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 5e-30
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 6e-30
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 7e-29
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 9e-28
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 6e-27
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 6e-27
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 6e-26
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 9e-26
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 6e-25
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 8e-25
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 109 3e-24
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 9e-23
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 5e-20
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 7e-20
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 8e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 65 6e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 60 2e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 58 1e-08
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 57 1e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 57 2e-08
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 56 4e-08
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 56 4e-08
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 7e-08
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 54 1e-07
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 53 3e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 4e-07
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 52 4e-07
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 52 4e-07
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-07
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 6e-07
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 52 8e-07
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 51 9e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 2e-06
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 50 2e-06
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 50 2e-06
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 357 bits (916), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 181/313 (57%), Positives = 209/313 (66%), Gaps = 3/313 (0%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MIS Y H + A+EL+ MDV PNES+FN II L DGS++AI YRKM
Sbjct: 120 MISHYTHC-GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRF 178
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + A LIKEIH Y RN I+PHPQL SGL+EAYGRCG +V
Sbjct: 179 KPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQL 238
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF M D +DVVAWSSLISAYALHG+A++AL+TF+EME+A V PD I FL VLKACSHA
Sbjct: 239 VFDSMED--RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHA 296
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G AD+AL YF RMQ DYG+ AS DHYSCLVDVLSR GR EAY+VI+ MP K TAK WGA
Sbjct: 297 GLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGA 356
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LLGACRN+GE+ LAEIA R VEPEN ANYVLL K+Y SVG GV
Sbjct: 357 LLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGV 416
Query: 301 KSTTGSSWVVYSE 313
K + GSSW ++ +
Sbjct: 417 KVSPGSSWCLFKD 429
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 159/305 (52%), Gaps = 16/305 (5%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGS------FKAIALYRKMXXXXXXXXX 64
+ A LFHLM + I + A G +A+ +R+M
Sbjct: 190 QMKKAKGLFHLM--------LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDE 241
Query: 65 XXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSK 124
C + +L L K IH Y R + + LIE Y +CG + + +F +
Sbjct: 242 ISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 301
Query: 125 MRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 184
M KDV++WS++IS YA HG A A+ETF EM+ A VKP+GITFLG+L ACSH G
Sbjct: 302 MEG--KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQ 359
Query: 185 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ L YF M++DY +E +HY CL+DVL+RAG+L A E+ + MP+K +K WG+LL +
Sbjct: 360 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 419
Query: 245 CRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTT 304
CR G L +A +A E+EPE+ NYVLLA +YA +G +K T
Sbjct: 420 CRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTP 479
Query: 305 GSSWV 309
G S +
Sbjct: 480 GGSLI 484
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 122/289 (42%), Gaps = 48/289 (16%)
Query: 10 DNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXX- 68
+++ A LF+ + PN +N II A N I +Y+++
Sbjct: 56 EDMDYATRLFNQVS-NPNVFLYNSIIRAYT-HNSLYCDVIRIYKQLLRKSFELPDRFTFP 113
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C ++ + L K++HG+ + H + LI+ Y + LV++ VF +M
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM--Y 171
Query: 129 DKDVVAWSSLISAYALHGEAKAA-------------------------------LETFKE 157
++DV++W+SL+S YA G+ K A ++ F+E
Sbjct: 172 ERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFRE 231
Query: 158 MEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 217
M++AG++PD I+ + VL +C+ G + +R G + + L+++ S+ G
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERR-GFLKQTGVCNALIEMYSKCG 290
Query: 218 RLHEAYEVIRGMPVKVTAKAWGALL----------GACRNFGELGLAEI 256
+ +A ++ M K +W ++ GA F E+ A++
Sbjct: 291 VISQAIQLFGQMEGK-DVISWSTMISGYAYHGNAHGAIETFNEMQRAKV 338
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 145/241 (60%), Gaps = 3/241 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++AL KEIH Y I+N++ +GS L++ Y +CGCL S VF ++ K+V+
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ--KNVI 584
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+ +I AY +HG + A++ + M + GVKP+ +TF+ V ACSH+G D+ L F M
Sbjct: 585 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVM 644
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT-AKAWGALLGACRNFGELG 252
+ DYGVE SSDHY+C+VD+L RAGR+ EAY+++ MP A AW +LLGA R L
Sbjct: 645 KPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLE 704
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYS 312
+ EIA + ++EP A++YVLLA +Y+S G GV+ G SW+ +
Sbjct: 705 IGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHG 764
Query: 313 E 313
+
Sbjct: 765 D 765
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 8/203 (3%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+N ++++L QN+ +A+ R+M C ++ L KE+H Y
Sbjct: 269 TWNTVLSSLC-QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 90 GIRN-DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
++N +D + +GS L++ Y C +++ VF M D+ + W+++I+ Y+ +
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM--FDRKIGLWNAMIAGYSQNEHD 385
Query: 149 KAALETFKEME-MAGVKPDGITFLGVLKACSHAG-FADDALCYFTRMQRDYGVEASSDHY 206
K AL F ME AG+ + T GV+ AC +G F+ + ++R G++
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR--GLDRDRFVQ 443
Query: 207 SCLVDVLSRAGRLHEAYEVIRGM 229
+ L+D+ SR G++ A + M
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKM 466
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVA---ALNLI 83
N+ ++N +I++L + A+ +R M C N+ L +
Sbjct: 163 NQVSWNSLISSLCSFEKWEM-ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H YG+R + + + + L+ YG+ G L +S + +D+V W++++S+
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG--RDLVTWNTVLSSLC 278
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
+ + ALE +EM + GV+PD T VL ACSH
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
CV A + + IHG+ ++ +D + + L++ Y R G + + +F KM D+D+V
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME--DRDLV 472
Query: 134 AWSSLISAYAL---HGEAKAALETFKEME--------MAGVKPDGITFLGVLKACSH-AG 181
W+++I+ Y H +A L + +E +KP+ IT + +L +C+ +
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 182 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGAL 241
A + ++ + + + S LVD+ ++ G L + +V +P K W +
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVI 589
Query: 242 LGA 244
+ A
Sbjct: 590 IMA 592
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 157/294 (53%), Gaps = 3/294 (1%)
Query: 16 LELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV 75
ELF + N ++ IIA AQN +A+ L+R+M C
Sbjct: 341 FELFKEQTMELNVVSWTSIIAG-CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACG 399
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N+AAL + HG+ +R + + +GS LI+ Y +CG + S VF+ M K++V W
Sbjct: 400 NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT--KNLVCW 457
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+SL++ +++HG+AK + F+ + +KPD I+F +L AC G D+ YF M
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
+YG++ +HYSC+V++L RAG+L EAY++I+ MP + + WGALL +CR + LAE
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Query: 256 IAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
IA +EPEN YVLL+ +YA+ G G+K G SW+
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 21 LMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAA 79
L +P P +F+ +I AL + ++I ++ +M C ++A
Sbjct: 73 LQSIPDPTIYSFSSLIYALTKAKLFT-QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
+ K+IH + +D + + Y RCG + ++ VF +M D KDVV S+L+
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD--KDVVTCSALL 189
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
AYA G + + EME +G++ + +++ G+L + +G+ +A+ F ++
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 151/277 (54%), Gaps = 4/277 (1%)
Query: 35 IAALAAQNDGSFKAIALYRKMXXXXXXXX--XXXXXXXXXXCVNVAALNLIKEIHGYGIR 92
+ A A+N +F+A+ +R+M C ++AAL K IHGY +R
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 93 NDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAAL 152
+D + S L+ YGRCG L VF +M D +DVV+W+SLIS+Y +HG K A+
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD--RDVVSWNSLISSYGVHGYGKKAI 371
Query: 153 ETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDV 212
+ F+EM G P +TF+ VL ACSH G ++ F M RD+G++ +HY+C+VD+
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDL 431
Query: 213 LSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANY 272
L RA RL EA ++++ M + K WG+LLG+CR G + LAE A R +EP+NA NY
Sbjct: 432 LGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNY 491
Query: 273 VLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
VLLA +YA G++ G W+
Sbjct: 492 VLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWM 528
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV----NVAALNLIKE 85
+N + AL G + + LY KM CV V L KE
Sbjct: 145 VWNALFRALTLAGHGE-EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE 203
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IH + R H + + L++ Y R GC+ + VF M ++VV+WS++I+ YA +
Sbjct: 204 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV--RNVVSWSAMIACYAKN 261
Query: 146 GEAKAALETFKEM--EMAGVKPDGITFLGVLKAC-SHAGFADDALCYFTRMQRDYGVEAS 202
G+A AL TF+EM E P+ +T + VL+AC S A L + ++R G+++
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR--GLDSI 319
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
S LV + R G+L V M + +W +L+ +
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV-SWNSLISS 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + ++L+ +H + + N D P L + LI Y G + + VF K R + +
Sbjct: 87 CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRK--RTIY 144
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC-------SHAGFADDA 186
W++L A L G + L + +M GV+ D T+ VLKAC +H +
Sbjct: 145 VWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEI 204
Query: 187 LCYFTRMQRDYGVEASSDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ TR R Y SS Y + LVD+ +R G + A V GMPV+ +W A++ A
Sbjct: 205 HAHLTR--RGY----SSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-A 256
Query: 245 C 245
C
Sbjct: 257 C 257
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 161/309 (52%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI+ YA + A LF M P + + A +Q+ SF+A+ L+ +M
Sbjct: 349 MITGYAQC-GKISEAKNLFDKM--PKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C +V AL L K++HG ++ + +G+ L+ Y +CG + + +
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F +M KD+V+W+++I+ Y+ HG + AL F+ M+ G+KPD T + VL ACSH
Sbjct: 466 LFKEM--AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D YF M +DYGV +S HY+C+VD+L RAG L +A+ +++ MP + A WG
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LLGA R G LAE A +EPEN+ YVLL+ +YAS G GV
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 301 KSTTGSSWV 309
K G SW+
Sbjct: 644 KKVPGYSWI 652
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 163/313 (52%), Gaps = 9/313 (2%)
Query: 1 MISLYAH--SPDNLPTALELFHLMDVPPNESTFNPIIAALAA--QNDGSFKAIALYRKMX 56
+IS ++H + + + LEL L P+ ++ II+ L QN+ +F A +++M
Sbjct: 224 LISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDA---FKQML 280
Query: 57 XXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLV 116
C +A + KEIHGY + ++ H + S L++ YG+CG +
Sbjct: 281 THGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFIS 340
Query: 117 NSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
+ +F K K V ++S+I YA HG A A+E F +ME G K D +TF +L A
Sbjct: 341 EAMILFRKTPK--KTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTA 398
Query: 177 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
CSHAG D F MQ Y + +HY+C+VD+L RAG+L EAYE+I+ M ++
Sbjct: 399 CSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLF 458
Query: 237 AWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXX 296
WGALL ACRN G + LA IA + AE+EPEN+ N +LL +YA+ G
Sbjct: 459 VWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIK 518
Query: 297 XXGVKSTTGSSWV 309
+ GSSWV
Sbjct: 519 KKRFRRFLGSSWV 531
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 45/177 (25%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK-------- 130
ALNL+K++ GI+ D+ L SG FS MR+ +K
Sbjct: 202 ALNLVKDMKLLGIKPDVITWNALISG-----------------FSHMRNEEKVSEILELM 244
Query: 131 -------DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 183
DVV+W+S+IS + + + A + FK+M G+ P+ T + +L AC+
Sbjct: 245 CLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT----- 299
Query: 184 DDALCYFTRMQRDYG---VEASSDH---YSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
L Y + +G V DH S L+D+ + G + EA + R P K T
Sbjct: 300 --TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTT 354
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K IH ++ + + S LI+ Y + G + N+ VFS + + +D+V ++++IS YA
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE--QDLVVFNAMISGYA 194
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
+ +A AL K+M++ G+KPD IT+ ++ SH
Sbjct: 195 NNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 161/300 (53%), Gaps = 5/300 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L A FH M+ + T+N +I+ L + S +A+ ++++
Sbjct: 264 LSEAKHYFHEME-DKDLITWNTLISEL--ERSDSSEALLMFQRFESQGFVPNCYTFTSLV 320
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C N+AALN +++HG R + + +L + LI+ Y +CG + +S VF ++ D ++
Sbjct: 321 AACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD-RRN 379
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+V+W+S++ Y HG A+E F +M +G++PD I F+ VL AC HAG + L YF
Sbjct: 380 LVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN 439
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ +YG+ D Y+C+VD+L RAG++ EAYE++ MP K WGA+LGAC+
Sbjct: 440 VMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHN 499
Query: 252 GL-AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
GL + +A R E++P+ YV+L+ +YA+ G G K G SW++
Sbjct: 500 GLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWIL 559
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 107/242 (44%), Gaps = 6/242 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
M+++YA + A +F + V N+ T+ +I DG + +Y++M
Sbjct: 152 MMNMYATCSVTMEAACLIFRDIKVK-NDVTWTTLITGFTHLGDG-IGGLKMYKQMLLENA 209
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
++ ++ K+IH I+ + + + +++ Y RCG L + +
Sbjct: 210 EVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKH 269
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
F +M DKD++ W++LIS ++ AL F+ E G P+ TF ++ AC++
Sbjct: 270 YFHEME--DKDLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANI 326
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
+ R+ R G + + + L+D+ ++ G + ++ V + + +W +
Sbjct: 327 AALNCGQQLHGRIFRR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTS 385
Query: 241 LL 242
++
Sbjct: 386 MM 387
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 98 HPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKE 157
H L + LI +Y G + + ++F +M D +DVVAW+++I+ YA A E F E
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPD--RDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 158 MEMAGVKPDGITFLGVLKACSH 179
M G P+ T VLK+C +
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRN 123
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 152/281 (54%), Gaps = 4/281 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N +I AQ+D AI ++R+M C N+ + + K IHG+
Sbjct: 509 SWNSMITR-CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGF 567
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
I++ + S LI+ Y +CG L + NVF M++ K++V+W+S+I+A HG+ K
Sbjct: 568 MIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE--KNIVSWNSIIAACGNHGKLK 625
Query: 150 AALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
+L F EM E +G++PD ITFL ++ +C H G D+ + +F M DYG++ +HY+C
Sbjct: 626 DSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYAC 685
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+VD+ RAGRL EAYE ++ MP A WG LLGACR + LAE+A +++P N
Sbjct: 686 VVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSN 745
Query: 269 AANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ YVL++ +A+ V+ G SW+
Sbjct: 746 SGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 94/177 (53%), Gaps = 12/177 (6%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
AL L +E+HG+ I+ D +G +I+ Y +CG + + +F ++ +D+V+W+S+
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK--RDIVSWNSM 513
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
I+ A AA++ F++M ++G+ D ++ L AC A ++ F + +
Sbjct: 514 ITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC--ANLPSES---FGKAIHGFM 568
Query: 199 VEAS--SDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
++ S SD Y S L+D+ ++ G L A V + M K +W +++ AC N G+L
Sbjct: 569 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKL 624
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L K+IH Y +R+ I L S LI+AY +C + + N+FS+ + DVV ++++I
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV--DVVVFTAMI 413
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY-- 197
S Y +G +LE F+ + + P+ IT + +L + ++ R+
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI--------GILLALKLGRELHG 465
Query: 198 -----GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
G + + ++D+ ++ GR++ AYE+ + K +W +++ C
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + ++L ++HG + + +D + + L+ Y +CG ++ +F M D V
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR--ADTV 306
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS---HAGFADDALCYF 190
W+ +IS Y G + +L F EM +GV PD ITF +L + S + + CY
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Query: 191 TR 192
R
Sbjct: 367 MR 368
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N L K++H + I N I ++ Y CG + +F ++ +
Sbjct: 45 CSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIR 104
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
W+S+IS++ +G AL + +M GV PD TF ++KAC
Sbjct: 105 PWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 9/240 (3%)
Query: 17 ELFHLMDVPPNE-STFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV 75
++F+ +D+ + +N II++ +N +A+A Y KM CV
Sbjct: 91 KMFYRLDLRRSSIRPWNSIISSFV-RNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV 149
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
+ I + +D + + S LI+AY G + +F ++ + KD V W
Sbjct: 150 ALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV--LQKDCVIW 207
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+ +++ YA G + ++ F M M + P+ +TF VL C+ D + +
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV-QLHGLVV 266
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
GV+ + L+ + S+ GR +A ++ R M + W ++ + + GL E
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG---YVQSGLME 322
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 150/292 (51%), Gaps = 3/292 (1%)
Query: 18 LFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNV 77
+F M V N T+N +I+ +N + L+R M C +
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYV-ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL 297
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
+AL L ++IH ++ + + LI Y +CG L ++ +F M+ KDVVAW++
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK--KDVVAWNA 355
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
+IS YA HG A AL F+EM ++PD ITF+ VL AC+HAG + + YF M RDY
Sbjct: 356 MISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDY 415
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
VE DHY+C+VD+L RAG+L EA ++IR MP + A +G LLGACR + LAE A
Sbjct: 416 KVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFA 475
Query: 258 GRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++ +NAA YV LA +YAS V G SW+
Sbjct: 476 AEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWI 527
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 136/236 (57%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++AA L KEIH +R + Q+G+ LIE Y +CGCL NS VF +M +DVV
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSR--RDVV 576
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+ +I AY ++GE + ALETF +ME +G+ PD + F+ ++ ACSH+G D+ L F +M
Sbjct: 577 TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ Y ++ +HY+C+VD+LSR+ ++ +A E I+ MP+K A W ++L ACR G++
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
AE R E+ P++ +L + YA++ + G SW+
Sbjct: 697 AERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 18/285 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I +YA D + TA ++F+ M+ S +N II+ D +A+ L++ M
Sbjct: 348 LIDVYAKCGD-MITARDVFNSMECKDTVS-WNSIISGYIQSGD-LMEAMKLFKMMMIMEE 404
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
+A L K +H GI++ I + + LI+ Y +CG + +S
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+FS M D V W+++ISA G+ L+ +M + V PD TFL L C+
Sbjct: 465 IFSSMGT--GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASL 522
Query: 181 G---FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
+ C R +G E+ + L+++ S+ G L + V M +
Sbjct: 523 AAKRLGKEIHCCLLR----FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV-T 577
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAA--NYVLLAKMYA 280
W ++ A +G G E A A++E + V +A +YA
Sbjct: 578 WTGMIYA---YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L+L K I+ Y ++ + + LI+ Y +CG ++ + +VF+ M KD V
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC--KDTV 374
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+IS Y G+ A++ FK M + + D IT+L ++ + AD F +
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR--LAD---LKFGKG 429
Query: 194 QRDYGVEA----SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
G+++ + L+D+ ++ G + ++ ++ M T W ++ AC FG
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV-TWNTVISACVRFG 488
Query: 250 EL--GLAEIAGRASAEVEPENAANYVLL 275
+ GL +EV P+ A V L
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTL 516
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
LN ++ IH I +D LI+ Y +S +VF ++ K+V W+S+I
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA-KNVYLWNSII 78
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ-RDYG 198
A++ +G ALE + ++ + V PD TF V+KAC AG D + Q D G
Sbjct: 79 RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVYEQILDMG 136
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
E+ + LVD+ SR G L A +V MPV+ +W +L+ + G
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLV-SWNSLISGYSSHG 186
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSF-KAIALYRKMXXXX 59
+I Y+H + ++L +F + N +N II A + +G F +A+ Y K+
Sbjct: 45 LIDKYSHFREP-ASSLSVFRRVSPAKNVYLWNSIIRAFS--KNGLFPEALEFYGKLRESK 101
Query: 60 XXXXXXXXXXXXXXCVNVAALNL----IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCL 115
C + + ++I G +D+ +G+ L++ Y R G L
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDL----FVGNALVDMYSRMGLL 157
Query: 116 VNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 175
+ VF +M +D+V+W+SLIS Y+ HG + ALE + E++ + + PD T VL
Sbjct: 158 TRARQVFDEMPV--RDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLP 215
Query: 176 A 176
A
Sbjct: 216 A 216
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 163/315 (51%), Gaps = 11/315 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MIS YA + L +F M N ++N +IA QN + +A++L+ +
Sbjct: 326 MISGYAMAASTKAARL-MFTKM-AERNVVSWNALIAGYT-QNGENEEALSLFCLLKRESV 382
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIH------GYGIRNDIDPHPQLGSGLIEAYGRCGC 114
C ++A L+L + H G+ ++ + +G+ LI+ Y +CGC
Sbjct: 383 CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 442
Query: 115 LVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 174
+ VF KM M++D V+W+++I +A +G ALE F+EM +G KPD IT +GVL
Sbjct: 443 VEEGYLVFRKM--MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVL 500
Query: 175 KACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
AC HAGF ++ YF+ M RD+GV DHY+C+VD+L RAG L EA +I MP++
Sbjct: 501 SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPD 560
Query: 235 AKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXX 294
+ WG+LL AC+ + L + EVEP N+ YVLL+ MYA +G
Sbjct: 561 SVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKS 620
Query: 295 XXXXGVKSTTGSSWV 309
GV G SW+
Sbjct: 621 MRKEGVTKQPGCSWI 635
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 4/221 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L A LF M ++ T+N +++ A Q+D +A+ + M
Sbjct: 102 LDEADSLFRSMP-ERDQCTWNSMVSGFA-QHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + +N ++H ++ +GS L++ Y +CG + ++ VF +M D ++
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD--RN 217
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
VV+W+SLI+ + +G A AL+ F+ M + V+PD +T V+ AC+
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
R+ ++ + + VD+ ++ R+ EA + MP++
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N ++N +I QN + +A+ +++ M C +++A+ + +E+
Sbjct: 217 NVVSWNSLITCFE-QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 87 HGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
HG ++ND + L + ++ Y +C + + +F M ++V+A +S+IS YA+
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI--RNVIAETSMISGYAMA 333
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
KAA F +M V +++ ++ + G ++AL F ++R+ H
Sbjct: 334 ASTKAARLMFTKMAERNV----VSWNALIAGYTQNGENEEALSLFCLLKRE---SVCPTH 386
Query: 206 YS 207
YS
Sbjct: 387 YS 388
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 4/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++++Y D L LF + ++N I+ A Q++ + + L++ M
Sbjct: 412 LLTMYTFCSD-LYCCFNLFEDFRNNADSVSWNTILTA-CLQHEQPVEMLRLFKLMLVSEC 469
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
CV +++L L ++H Y ++ + P + +GLI+ Y +CG L +
Sbjct: 470 EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARR 529
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F M + +DVV+WS+LI YA G + AL FKEM+ AG++P+ +TF+GVL ACSH
Sbjct: 530 IFDSMDN--RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHV 587
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G ++ L + MQ ++G+ + +H SC+VD+L+RAGRL+EA I M ++ W
Sbjct: 588 GLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKT 647
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL AC+ G + LA+ A +++P N+ +VLL M+AS G V
Sbjct: 648 LLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDV 707
Query: 301 KSTTGSSWV 309
K G SW+
Sbjct: 708 KKIPGQSWI 716
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + +L ++IH + + ++ L + ++ YG+CG L ++ VF M + +++V
Sbjct: 77 CSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE--RNLV 134
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC---SHAGFADDALCYF 190
+++S+I+ Y+ +G+ A+ + +M + PD F ++KAC S G
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 191 TRMQRDYGVEASSDHY---SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
+++ SS H + L+ + R ++ +A V G+P+K +W +++
Sbjct: 195 IKLE-------SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK-DLISWSSIIAG--- 243
Query: 248 FGELGL 253
F +LG
Sbjct: 244 FSQLGF 249
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 35/254 (13%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+L A E+F M N ++ +I + G+ +AI LY KM
Sbjct: 117 SLRDAREVFDFMP-ERNLVSYTSVITGYSQNGQGA-EAIRLYLKMLQEDLVPDQFAFGSI 174
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + + + L K++H I+ + H + LI Y R + ++ VF + K
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM--K 232
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGV-KPDGITFLGVLKACSHAGFADDALCY 189
D+++WSS+I+ ++ G AL KEM GV P+ F LKACS
Sbjct: 233 DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS----------- 281
Query: 190 FTRMQRDYGVEASSDHYSC--------------LVDVLSRAGRLHEAYEVIRGMPVKVTA 235
+ ++ DYG S H C L D+ +R G L+ A V + TA
Sbjct: 282 -SLLRPDYG---SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTA 337
Query: 236 KAWGALLGACRNFG 249
+W ++ N G
Sbjct: 338 -SWNVIIAGLANNG 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
+IHG I++++ + G L + Y RCG L ++ VF ++ D +W+ +I+ A
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER--PDTASWNVIIAGLAN 348
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
+G A A+ F +M +G PD I+ +L A
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 154/284 (54%), Gaps = 4/284 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N++++ +I + +N +A+ L+ M C ++A+L+ K++
Sbjct: 295 NDASWQTVIK-IHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H +R D + S L+ Y +CG LV S +F + KD++ W+S+IS YA HG
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS--KDIIMWNSIISGYASHG 411
Query: 147 EAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
+ AL+ F EM ++G KP+ +TF+ L ACS+AG ++ L + M+ +GV+ + H
Sbjct: 412 LGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAH 471
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y+C+VD+L RAGR +EA E+I M V+ A WG+LLGACR +L +AE + E+E
Sbjct: 472 YACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIE 531
Query: 266 PENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
PEN+ Y+LL+ MYAS G V+ + G SW
Sbjct: 532 PENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWT 575
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 153/299 (51%), Gaps = 5/299 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+ TA LF M PN +N +I+ A +N + +AI ++ +M
Sbjct: 272 QVATAKILFDKMK-SPNLILWNAMISGYA-KNGYAREAIDMFHEMINKDVRPDTISITSA 329
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C V +L + ++ Y R+D + S LI+ + +CG + + VF R +D+
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD--RTLDR 387
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
DVV WS++I Y LHG A+ A+ ++ ME GV P+ +TFLG+L AC+H+G + +F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
RM D+ + HY+C++D+L RAG L +AYEVI+ MPV+ WGALL AC+
Sbjct: 448 NRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ L E A + ++P N +YV L+ +YA+ G+ G SWV
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I+LYA L +A +F + +P I + AQN +A+ ++ +M
Sbjct: 160 LIALYAKC-RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
+ L + IH ++ ++ P L L Y +CG + +
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F KM+ +++ W+++IS YA +G A+ A++ F EM V+PD I+ + AC+
Sbjct: 279 LFDKMK--SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 181 GFADDALCYFTRMQR-DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
G + A + + R DY + S L+D+ ++ G + E ++ + W
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSV-EGARLVFDRTLDRDVVVWS 393
Query: 240 ALL 242
A++
Sbjct: 394 AMI 396
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 23 DVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALN 81
D+P P +N II + +N+ A+ +Y M C ++ L
Sbjct: 78 DLPRPQIFPWNAIIRGYS-RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
+ + +H R D + +GLI Y +C L ++ VF + ++ +V+W++++SA
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
YA +GE ALE F +M VKPD + + VL A
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
+K+IH + + L + LI A G + + VF + + W+++I Y
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR--PQIFPWNAIIRGY 94
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ-RDYGVEA 201
+ + + AL + M++A V PD TF +LKACS G + + F Q G +A
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS--GLSHLQMGRFVHAQVFRLGFDA 152
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPV-KVTAKAWGALLGACRNFGE 250
+ L+ + ++ RL A V G+P+ + T +W A++ A GE
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 149/283 (52%), Gaps = 3/283 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N T+N +I+ L+ + + L+RKM C VAAL KEI
Sbjct: 301 NVVTWNSLISVLSKKVR-VHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEI 359
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H +++ P L + L++ YG+CG + S VF M + KD+ +W+ +++ YA++G
Sbjct: 360 HAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM--LTKDLASWNIMLNCYAING 417
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
+ + F+ M +GV PDGITF+ +L CS G + L F RM+ ++ V + +HY
Sbjct: 418 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHY 477
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEP 266
+CLVD+L RAG++ EA +VI MP K +A WG+LL +CR G + + EIA + +EP
Sbjct: 478 ACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEP 537
Query: 267 ENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
N NYV+++ +YA GVK G SWV
Sbjct: 538 HNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWV 580
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 150/293 (51%), Gaps = 3/293 (1%)
Query: 17 ELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVN 76
E+ H+ +V N T+ +I Q G ++ +R+M C
Sbjct: 388 EMNHVCNVKANVVTWTSVIKGCNVQGRGD-DSLEYFRQMQFSKVLANSVTICCILSICAE 446
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+ ALNL +EIHG+ IR + + + + L+ Y +CG L VF +RD KD+++W+
Sbjct: 447 LPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD--KDLISWN 504
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
S+I Y +HG A+ AL F M +G PDGI + VL ACSHAG + F M +
Sbjct: 505 SIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKR 564
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEI 256
+G+E +HY+C+VD+L R G L EA E+++ MP++ GALL +CR + +AE
Sbjct: 565 FGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEG 624
Query: 257 AGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ +EPE +Y+LL+ +Y++ G +K +GSSW+
Sbjct: 625 IASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWI 677
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 114/233 (48%), Gaps = 14/233 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLM---DVPPNESTFNPIIAALAAQNDGSFKAIALY-RKMX 56
MI ++ D +A+++F M + P+E T+ +++ G F+ + Y M
Sbjct: 230 MIKGFSQEYD-CESAVKIFEWMQREEFKPDEVTWTSVLSC--HSQCGKFEDVLKYFHLMR 286
Query: 57 XXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLV 116
C + AL++ +++HGY I+ + + + LI YG+ G +
Sbjct: 287 MSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVK 346
Query: 117 NSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME----MAGVKPDGITFLG 172
++ ++F ++R +K + +W+SLI+++ G+ AL F E+E + VK + +T+
Sbjct: 347 DAEHLFRQIR--NKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTS 404
Query: 173 VLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
V+K C+ G DD+L YF +MQ V A+S C++ + + L+ E+
Sbjct: 405 VIKGCNVQGRGDDSLEYFRQMQFS-KVLANSVTICCILSICAELPALNLGREI 456
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
Query: 84 KEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMR-DMDKDVVAWSSLISA 141
+++H + +D I L + LI Y R G L+++ NVF + + D+ W+S++ A
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
HG + ALE ++ M G+ DG +L+AC + G + T++ + G++
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ-IGLKE 191
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ + L+ + +AGR+ +AY + MPV+ +W ++
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVR-NRMSWNVMI 231
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 48 AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIE 107
A+ LYR M C + L + H I+ + + + + L+
Sbjct: 142 ALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLT 201
Query: 108 AYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 167
Y + G + ++ N+F +M ++ ++W+ +I ++ + ++A++ F+ M+ KPD
Sbjct: 202 LYPKAGRMGDAYNLFVEMPVRNR--MSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDE 259
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQ 194
+T+ VL S G +D L YF M+
Sbjct: 260 VTWTSVLSCHSQCGKFEDVLKYFHLMR 286
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 140/277 (50%), Gaps = 2/277 (0%)
Query: 35 IAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND 94
I A QN+ A+ L+++M +A L IH Y +
Sbjct: 391 IIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTG 450
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAWSSLISAYALHGEAKAAL 152
+GL+ Y +CG L ++ +F+ +++ KDVV W +LIS Y +HG+ AL
Sbjct: 451 FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNAL 510
Query: 153 ETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDV 212
+ F EM +GV P+ ITF L ACSH+G ++ L F M Y A S+HY+C+VD+
Sbjct: 511 QVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDL 570
Query: 213 LSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANY 272
L RAGRL EAY +I +P + T+ WGALL AC + L E+A E+EPEN NY
Sbjct: 571 LGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNY 630
Query: 273 VLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
VLLA +YA++G G++ G S +
Sbjct: 631 VLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L + + +H + ++ + L+ Y +CG + + VF +M +DV+
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMER--RDVI 285
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC---YF 190
W+ +I+ Y G+ + ALE + M+ GV+P+ +T ++ C A +D C +
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345
Query: 191 TRMQ--RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
R Q D +E S L+ + ++ R+ + V G K W A++ C
Sbjct: 346 VRQQVYSDIIIETS------LISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGC 395
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + +N K +HG+ +R + + + LI Y +C + VFS
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTG-- 386
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD-----DALC 188
WS++I+ + AL FK M V+P+ T +L A +A AD + C
Sbjct: 387 PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHC 444
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK---AWGALL 242
Y T+ G +S D + LV V S+ G L A+++ G+ K +K WGAL+
Sbjct: 445 YLTKT----GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 154/290 (53%), Gaps = 15/290 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLM---DVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXX 57
M+S YA S D + A+ LF M DVP ++N I+AA QN +A++L+R+M
Sbjct: 199 MLSGYARSGD-ISNAVALFEDMPERDVP----SWNAILAA-CTQNGLFLEAVSLFRRMIN 252
Query: 58 XXXXXXXXXXXX-XXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLV 116
C L L K IH + R D+ + + L++ YG+CG L
Sbjct: 253 EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLE 312
Query: 117 NSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM---EMAGVKPDGITFLGV 173
+ +VF KM K + AW+S+I+ +ALHG ++ A+ F+EM + +KPD ITF+G+
Sbjct: 313 EASSVF-KMAS-KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 174 LKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKV 233
L AC+H G YF M +G+E +HY CL+D+L RAGR EA EV+ M +K
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKA 430
Query: 234 TAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
WG+LL AC+ G L LAE+A + + P N ++A +Y +G
Sbjct: 431 DEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMG 480
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 165/311 (53%), Gaps = 8/311 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNE-STFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
++ LYA+ D + +A ++F M P + +N +I A +N +A+ALY +M
Sbjct: 29 LLHLYANCGD-VASAYKVFDKM--PEKDLVAWNSVINGFA-ENGKPEEALALYTEMNSKG 84
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C + AL L K +H Y I+ + + + L++ Y RCG + +
Sbjct: 85 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 144
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME-MAGVKPDGITFLGVLKACS 178
+F +M +DK+ V+W+SLI A++G K A+E FK ME G+ P ITF+G+L ACS
Sbjct: 145 TLFDEM--VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 202
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW 238
H G + YF RM+ +Y +E +H+ C+VD+L+RAG++ +AYE I+ MP++ W
Sbjct: 203 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 262
Query: 239 GALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXX 298
LLGAC G+ LAE A ++EP ++ +YVLL+ MYAS
Sbjct: 263 RTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRD 322
Query: 299 GVKSTTGSSWV 309
GVK G S V
Sbjct: 323 GVKKVPGHSLV 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+A + L + IH IR+ + + L+ Y CG + ++ VF KM +KD+VAW+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP--EKDLVAWN 58
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRM 193
S+I+ +A +G+ + AL + EM G+KPDG T + +L AC+ G Y ++
Sbjct: 59 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ +S + L+D+ +R GR+ EA + M V + +W +L+
Sbjct: 119 GLTRNLHSS----NVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 165/311 (53%), Gaps = 8/311 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNE-STFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
++ LYA+ D + +A ++F M P + +N +I A +N +A+ALY +M
Sbjct: 162 LLHLYANCGD-VASAYKVFDKM--PEKDLVAWNSVINGFA-ENGKPEEALALYTEMNSKG 217
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C + AL L K +H Y I+ + + + L++ Y RCG + +
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME-MAGVKPDGITFLGVLKACS 178
+F +M +DK+ V+W+SLI A++G K A+E FK ME G+ P ITF+G+L ACS
Sbjct: 278 TLFDEM--VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW 238
H G + YF RM+ +Y +E +H+ C+VD+L+RAG++ +AYE I+ MP++ W
Sbjct: 336 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 395
Query: 239 GALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXX 298
LLGAC G+ LAE A ++EP ++ +YVLL+ MYAS
Sbjct: 396 RTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRD 455
Query: 299 GVKSTTGSSWV 309
GVK G S V
Sbjct: 456 GVKKVPGHSLV 466
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 12/239 (5%)
Query: 8 SPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXX 67
SP + A ++F ++ P N +N +I A + S A +LYR+M
Sbjct: 65 SPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGN-SISAFSLYREMRVSGLVEPDTHT 123
Query: 68 XXXXXXCVNVAA-LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMR 126
V A + L + IH IR+ + + L+ Y CG + ++ VF KM
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183
Query: 127 DMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FA 183
+KD+VAW+S+I+ +A +G+ + AL + EM G+KPDG T + +L AC+ G
Sbjct: 184 --EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 184 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
Y ++ + +S + L+D+ +R GR+ EA + M V + +W +L+
Sbjct: 242 KRVHVYMIKVGLTRNLHSS----NVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 131/238 (55%), Gaps = 2/238 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C NV++L + HG I + + + + + L+ YG+CG + +S +F++M +D V
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV--RDAV 438
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W++++SAYA G A ++ F +M G+KPDG+T GV+ ACS AG + YF M
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+YG+ S HYSC++D+ SR+GRL EA I GMP A W LL ACRN G L +
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEI 558
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVY 311
+ A + E++P + A Y LL+ +YAS G VK G SW+ +
Sbjct: 559 GKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKW 616
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 15/243 (6%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+ AL+LF M+ + ++ +I LA QN + +AI +R+M
Sbjct: 221 IEDALQLFRGME--KDSVSWAAMIKGLA-QNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + A+N K+IH IR + H +GS LI+ Y +C CL + VF +M+ K+
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ--KN 335
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
VV+W++++ Y G A+ A++ F +M+ +G+ PD T + AC++ ++ +
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 192 RMQRDYGVEASSDHY----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
+ + + HY + LV + + G + ++ + M V+ A +W A++ A
Sbjct: 396 K-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQ 449
Query: 248 FGE 250
FG
Sbjct: 450 FGR 452
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 39/209 (18%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM-------------- 125
++L K+IHG I+ + + +GS L+ Y GC+ ++ VF +
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 126 --------------RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 171
R M+KD V+W+++I A +G AK A+E F+EM++ G+K D F
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 172 GVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY---SCLVDVLSRAGRLHEAYEVIRG 228
VL AC G ++ + R DH S L+D+ + LH A V
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIR----TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 229 MPVKVTAKAWGALLGACRNFGELGLAEIA 257
M K +W A++ +G+ G AE A
Sbjct: 331 MKQK-NVVSWTAMVVG---YGQTGRAEEA 355
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 130/237 (54%), Gaps = 3/237 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSG-LIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C ++AAL + K+IH Y +RN + P S LI+ Y +CG + ++ VF M M K+
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM--MAKNE 544
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
V W+SL++ Y +HG + AL F EM G K DG+T L VL ACSH+G D + YF R
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
M+ +GV +HY+CLVD+L RAGRL+ A +I MP++ W A L CR G++
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
L E A E+ + +Y LL+ +YA+ G GVK G SWV
Sbjct: 665 LGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+G+ L+ Y RC L ++ VF +M D VV+W+S+I +YA G+ K ALE F M
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWD--VVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 161 A-GVKPDGITFLGVLKACSHAG---FADDALCY--FTRMQRDYGVEASSDHYSCLVDVLS 214
G +PD IT + VL C+ G C+ + M ++ V +CLVD+ +
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG------NCLVDMYA 275
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+ G + EA V M VK +W A++ + ++G E A R +++ E
Sbjct: 276 KCGMMDEANTVFSNMSVKDVV-SWNAMVAG---YSQIGRFEDAVRLFEKMQEEK 325
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 22/244 (9%)
Query: 15 ALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
A+ LF M + + T++ I+ A + G ++A+ + R+M
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG-YEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSG--------LIEAYGRCGCLVNSCNVFS 123
C +V AL KEIH Y I+ ID G G LI+ Y +C + + +F
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKN-GHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 124 KMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM--EMAGVKPDGITFLGVLKACSHAG 181
+ ++DVV W+ +I Y+ HG+A ALE EM E +P+ T L AC+
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA 491
Query: 182 ---FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW 238
Y R Q++ S+ CL+D+ ++ G + +A V M K W
Sbjct: 492 ALRIGKQIHAYALRNQQNAVPLFVSN---CLIDMYAKCGSISDARLVFDNMMAK-NEVTW 547
Query: 239 GALL 242
+L+
Sbjct: 548 TSLM 551
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 40/217 (18%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD---- 129
C ++ +L K++H + + +++ + +G+ L++ Y +CG + + VFS M D
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 130 -----------------------------KDVVAWSSLISAYALHGEAKAALETFKEMEM 160
DVV WS+ IS YA G AL ++M
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 161 AGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEASSDH---YSCLVDVLS 214
+G+KP+ +T + VL C+ G + CY + D D + L+D+ +
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 215 RAGRLHEAYEVIRGM-PVKVTAKAWGALLGACRNFGE 250
+ ++ A + + P + W ++G G+
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 21/204 (10%)
Query: 74 CVNVAALNLI-KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C ++ + LI +++ +GI L S LI Y GCL ++ ++ + D V
Sbjct: 38 CKTISQVKLIHQKLLSFGILT-----LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGV 92
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-----HAGFADDAL 187
W+SLI +Y +G A L F M PD TF V KAC G + AL
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
T + V + LV + SR L +A +V M V +W +++ +
Sbjct: 153 SLVTGFISNVFVG------NALVAMYSRCRSLSDARKVFDEMSV-WDVVSWNSIIESYAK 205
Query: 248 FGELGLA-EIAGRASAEV--EPEN 268
G+ +A E+ R + E P+N
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDN 229
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 159/295 (53%), Gaps = 6/295 (2%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
AL +F M V + +N II A QN S A+ L+++M C
Sbjct: 213 ALSVFDEM-VTGDAIVWNSIIGGFA-QNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+A L L + H + ++ D D L + L++ Y +CG L ++ VF++M++ +DV+
Sbjct: 271 TGLALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKE--RDVIT 326
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
WS++IS A +G ++ AL+ F+ M+ +G KP+ IT +GVL ACSHAG +D YF M+
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
+ YG++ +HY C++D+L +AG+L +A +++ M + A W LLGACR + LA
Sbjct: 387 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLA 446
Query: 255 EIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E A + ++PE+A Y LL+ +YA+ G+K G SW+
Sbjct: 447 EYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 97 PHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFK 156
P L + LI Y + L ++ +F +M ++V++W+++ISAY+ + ALE
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ--RNVISWTTMISAYSKCKIHQKALELLV 151
Query: 157 EMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRA 216
M V+P+ T+ VL++C+ G +D + + ++ G+E+ S L+DV ++
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCN--GMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKL 207
Query: 217 GRLHEAYEVIRGMPVKVTAKAWGALLG 243
G +A V M V A W +++G
Sbjct: 208 GEPEDALSVFDEM-VTGDAIVWNSIIG 233
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 174 bits (440), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 153/298 (51%), Gaps = 4/298 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+ A+ LF M+ ST+N +I+ L QN+ + I +R+M
Sbjct: 316 VKEAMALFSEME-SIGLSTWNAMISGLM-QNNHHEEVINSFREMIRCGSRPNTVTLSSLL 373
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
+ L KEIH + IRN D + + + +I+ Y + G L+ + VF +D +
Sbjct: 374 PSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKD--RS 431
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
++AW+++I+AYA+HG++ +A F +M+ G KPD +T VL A +H+G +D A F
Sbjct: 432 LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFD 491
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M Y +E +HY+C+V VLSRAG+L +A E I MP+ AK WGALL G+L
Sbjct: 492 SMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDL 551
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+A A E+EPEN NY ++A +Y G G+K G+SW+
Sbjct: 552 EIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWI 609
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 81 NLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLIS 140
+L +++HG+ IR D +G+G+I Y +C + ++ VF +M ++DVV+W+S+IS
Sbjct: 149 SLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMS--ERDVVSWNSMIS 206
Query: 141 AYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHA 180
Y+ G + + +K M + KP+G+T + V +AC +
Sbjct: 207 GYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQS 247
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 8/181 (4%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIA-LYRKMXXXX 59
MI+ Y DN+ +A ++F M + ++N +I+ + GSF+ +Y+ M
Sbjct: 173 MITYYTKC-DNIESARKVFDEMS-ERDVVSWNSMISGYS--QSGSFEDCKKMYKAMLACS 228
Query: 60 XXX-XXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C + L E+H I N I L + +I Y +CG L +
Sbjct: 229 DFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYA 288
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+F +M + KD V + ++IS Y HG K A+ F EME G+ G+++
Sbjct: 289 RALFDEMSE--KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNH 346
Query: 179 H 179
H
Sbjct: 347 H 347
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 145/292 (49%), Gaps = 5/292 (1%)
Query: 20 HLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNV 77
H + P + T +N IIAA D +A+ L+ +M +
Sbjct: 364 HYFEKTPEKHTVSWNSIIAAYEKNKDYK-EAVDLFIRMNIEGEKPDPHTLTSLLSASTGL 422
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
L L ++H ++ I P + + LI Y RCG ++ S +F +M+ + ++V+ W++
Sbjct: 423 VNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMK-LKREVITWNA 480
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
+I YA HG A AL F M+ G+ P ITF+ VL AC+HAG D+A F M Y
Sbjct: 481 MIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVY 540
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
+E +HYS LV+V S G+ EA +I MP + WGALL ACR + +GLA +A
Sbjct: 541 KIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVA 600
Query: 258 GRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A + +EPE++ YVLL MYA +G +K GSSWV
Sbjct: 601 AEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 161/309 (52%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ LYA + A+++F M + T++ ++A QN +A+ LYR+
Sbjct: 203 LLDLYAKC-GMIKDAVQVFESMQ-DKSSVTWSSMVAGYV-QNKNYEEALLLYRRAQRMSL 259
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C N+AAL K++H ++ + + S ++ Y +CG L S
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 319
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+FS++++ K++ W+++IS +A H K + F++M+ G+ P+ +TF +L C H
Sbjct: 320 IFSEVQE--KNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G ++ +F M+ YG+ + HYSC+VD+L RAG L EAYE+I+ +P TA WG+
Sbjct: 378 GLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGS 437
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL +CR + L LAE+A E+EPENA N+VLL+ +YA+ V
Sbjct: 438 LLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDV 497
Query: 301 KSTTGSSWV 309
K G SW+
Sbjct: 498 KKVRGKSWI 506
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C A+ K HG IR D++ L + LI AY +CG + + VF M +++ +V
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM--LERSLV 128
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL------ 187
+W+++I Y + AL+ F EM G K T VL AC G DAL
Sbjct: 129 SWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALECKKLH 185
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC-- 245
C + D + + L+D+ ++ G + +A +V M K ++ W +++
Sbjct: 186 CLSVKTCIDLNLYVG----TALLDLYAKCGMIKDAVQVFESMQDK-SSVTWSSMVAGYVQ 240
Query: 246 -RNFGE-LGLAEIAGRASAE 263
+N+ E L L A R S E
Sbjct: 241 NKNYEEALLLYRRAQRMSLE 260
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
VN AL K++H ++ ID + +G+ L++ Y +CG + ++ VF M+ DK V
Sbjct: 174 VNCDALE-CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ--DKSSVT 230
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-AGFADDALCYFTRM 193
WSS+++ Y + + AL ++ + ++ + T V+ ACS+ A + +
Sbjct: 231 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC 290
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
+ +G S VD+ ++ G L E+Y + + K + W ++
Sbjct: 291 KSGFGSNVFVA--SSAVDMYAKCGSLRESYIIFSEVQEK-NLELWNTIIS 337
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 143/280 (51%), Gaps = 3/280 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N ++A QN +A+ L+R+M C ++A L+L K++HGY
Sbjct: 310 SWNSLVAGYV-QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
+R + + S L++ Y +CG + + +F +M +D+ V+W+++I +ALHG
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE--VSWTAIIMGHALHGHGH 426
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
A+ F+EM+ GVKP+ + F+ VL ACSH G D+A YF M + YG+ +HY+ +
Sbjct: 427 EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 486
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
D+L RAG+L EAY I M V+ T W LL +C L LAE V+ EN
Sbjct: 487 ADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM 546
Query: 270 ANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
YVL+ MYAS G G++ SW+
Sbjct: 547 GAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWI 586
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
KEIHGY IR ID +GS L++ Y + + +S VFS++ +D ++W+SL++ Y
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL--YCRDGISWNSLVAGYV 319
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY----GV 199
+G AL F++M A VKP + F V+ AC+H A + + Y G
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL-----ATLHLGKQLHGYVLRGGF 374
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
++ S LVD+ S+ G + A ++ M V + +W A++
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAII 416
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 157/312 (50%), Gaps = 41/312 (13%)
Query: 1 MISLYAHSPDNLPTALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXX 57
M++ YA + + A+++F + + PNE TF+ I+ AA N
Sbjct: 465 MLAGYAQTGET-EAAIKMFGELTKGGIKPNEFTFSSILNVCAATN--------------- 508
Query: 58 XXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN 117
A++ K+ HG+ I++ +D + S L+ Y + G + +
Sbjct: 509 --------------------ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+ VF + R+ KD+V+W+S+IS YA HG+A AL+ FKEM+ VK DG+TF+GV AC
Sbjct: 549 AEEVFKRQRE--KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
+HAG ++ YF M RD + + +H SC+VD+ SRAG+L +A +VI MP +
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXX 297
W +L ACR + L +A ++PE++A YVLL+ MYA G
Sbjct: 667 WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 726
Query: 298 XGVKSTTGSSWV 309
VK G SW+
Sbjct: 727 RNVKKEPGYSWI 738
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 115/242 (47%), Gaps = 20/242 (8%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
AL LF + N ++ +I+ QNDG +A+ L+ +M
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFL-QNDGKEEAVDLFSEMKRKGVRPNEFTYS------ 401
Query: 75 VNVAALNLIK--EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
V + AL +I E+H ++ + + +G+ L++AY + G + + VFS + D KD+
Sbjct: 402 VILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD--KDI 459
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
VAWS++++ YA GE +AA++ F E+ G+KP+ TF +L C+ A +A +
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA----ATNASMGQGK 515
Query: 193 MQRDYGVEASSDHYSC----LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
+ +++ D C L+ + ++ G + A EV + K +W +++
Sbjct: 516 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV-SWNSMISGYAQH 574
Query: 249 GE 250
G+
Sbjct: 575 GQ 576
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+++H I+ +G+ L++ Y + + VF +M++ ++VV W++LIS YA
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE--RNVVTWTTLISGYA 170
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+ L F M+ G +P+ TF L + G L T + ++ G++ +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN-GLDKTI 229
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ L+++ + G + +A + VK + W +++
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMI 267
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++H ++N +D + + LI Y +CG + + +F K K VV W+S+IS YA
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV--KSVVTWNSMISGYAA 272
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEA 201
+G AL F M + V+ +F V+K C++ F + C + YG
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK----YGFLF 328
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACRNFGE 250
+ + L+ S+ + +A + + + +W A++ G +N G+
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 128/234 (54%), Gaps = 2/234 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C V AL L + IH Y ++ I + + S LI Y +CG L S VF+ + +DV
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK--RDVF 432
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
WS++I A+HG A++ F +M+ A VKP+G+TF V ACSH G D+A F +M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ +YG+ HY+C+VDVL R+G L +A + I MP+ + WGALLGAC+ L L
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
AE+A E+EP N +VLL+ +YA +G G+K G S
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 9/223 (4%)
Query: 23 DVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALN 81
++P PN +N +I A A+ D A + V++L+
Sbjct: 89 EIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLS 148
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
L + +HG +++ + + + LI Y CG L ++C VF+ +++ KDVV+W+S+I+
Sbjct: 149 LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE--KDVVSWNSMING 206
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD--DALCYFTRMQRDYGV 199
+ G ALE FK+ME VK +T +GVL AC+ + +C + R V
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR---V 263
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ + ++D+ ++ G + +A + M K W +L
Sbjct: 264 NVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV-TWTTML 305
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 104/244 (42%), Gaps = 33/244 (13%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N +I Q KA+ L++KM C + L +++ Y
Sbjct: 199 SWNSMINGFV-QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD-------------------- 129
N ++ + L + +++ Y +CG + ++ +F M + D
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 130 ---------KDVVAWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSH 179
KD+VAW++LISAY +G+ AL F E+++ +K + IT + L AC+
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
G + + +++ +G+ + S L+ + S+ G L ++ EV + K W
Sbjct: 378 VGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWS 435
Query: 240 ALLG 243
A++G
Sbjct: 436 AMIG 439
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 128/225 (56%), Gaps = 2/225 (0%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++H Y + + P +GS L+ Y + G + + C FS++ D++AW++LI++YA
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING--PDLIAWTALIASYAQ 730
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
HG+A AL+ + M+ G KPD +TF+GVL ACSH G +++ + M +DYG+E +
Sbjct: 731 HGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENR 790
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
HY C+VD L R+GRL EA I M +K A WG LL AC+ GE+ L ++A + + E+
Sbjct: 791 HYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIEL 850
Query: 265 EPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
EP +A Y+ L+ + A VG GV+ G S V
Sbjct: 851 EPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 10/231 (4%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+IS+Y+ S D + + ++F +D ++ N +I + + Q+ KAI L+ +M
Sbjct: 392 LISMYSKSGD-IDLSEQVFEDLDDIQRQNIVNVMITSFS-QSKKPGKAIRLFTRMLQEGL 449
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
+ LNL K++HGY +++ + +GS L Y +CG L S
Sbjct: 450 RTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC-SH 179
+F + KD W+S+IS + +G + A+ F EM G PD T VL C SH
Sbjct: 507 LFQGIPF--KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP 230
+ ++ G++ D S LV++ S+ G L A +V +P
Sbjct: 565 PSLPRGKEIHGYTLRA--GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+AI L+ +M C + +L KEIHGY +R ID LGS L+
Sbjct: 534 EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALV 593
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y +CG L + V+ ++ ++D V+ SSLIS Y+ HG + F++M M+G D
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDP--VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMD 651
Query: 167 GITFLGVLKA 176
+LKA
Sbjct: 652 SFAISSILKA 661
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 27 NESTFNPIIA-ALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
N +N IIA AL QN G+ L+ +M C ++ L K
Sbjct: 215 NVYCWNTIIAGALRNQNYGA--VFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKV 272
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+ I+ + + + +++ Y +CG + + VFS++ + VV+W+ ++S Y
Sbjct: 273 VQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPN--PSVVSWTVMLSGYTKS 329
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+A +ALE FKEM +GV+ + T V+ AC
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 109/254 (42%), Gaps = 15/254 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
++ LYA ++ A+E+F +P P+ ++ +++ ND +F A+ ++++M
Sbjct: 291 IVDLYAKC-GHMAEAMEVFS--RIPNPSVVSWTVMLSGYTKSND-AFSALEIFKEMRHSG 346
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C + + ++H + ++ + + LI Y + G + S
Sbjct: 347 VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSE 406
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA--C 177
VF + D+ + + + +I++++ + A+ F M G++ D + +L C
Sbjct: 407 QVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC 465
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
+ G + + D V +S L + S+ G L E+Y++ +G+P K A
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPFKDNA-C 518
Query: 238 WGALLGACRNFGEL 251
W +++ +G L
Sbjct: 519 WASMISGFNEYGYL 532
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQ-LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
L K + + +R + P L L+ Y G + ++ +F + DVV+ + +
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQ--PDVVSCNIM 121
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS--HAGFADDALCYFTRMQRD 196
IS Y H + +L F +M G + + I++ V+ ACS A + +C T
Sbjct: 122 ISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGY 181
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACRN 247
+ E S L+DV S+ R +AY+V R + W ++ GA RN
Sbjct: 182 FFYEVVE---SALIDVFSKNLRFEDAYKVFRD-SLSANVYCWNTIIAGALRN 229
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 152/298 (51%), Gaps = 4/298 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+ A +F LM+ N +T+ +I A + +A+ L+ +M
Sbjct: 281 ISKARRVFDLMEDRDN-ATWRGMIKAYERKG-FELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C +A+L +++H + +R D + S L+ Y +CG LV + VF + KD
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS--KD 396
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
++ W+S+IS YA HG + AL+ F EM +G P+ +T + +L ACS+AG ++ L F
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ + V + +HYSC VD+L RAG++ +A E+I M +K A WGALLGAC+ L
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRL 516
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LAE+A + E EP+NA YVLL+ + AS V G SW+
Sbjct: 517 DLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 155/280 (55%), Gaps = 5/280 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++Y D + +A +F + V P +N +I A +N + +A++L+R+M
Sbjct: 170 LINMYTECED-VDSARCVFDRI-VEPCVVCYNAMITGYARRNRPN-EALSLFREMQGKYL 226
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + +L+L K IH Y ++ + ++ + LI+ + +CG L ++ +
Sbjct: 227 KPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVS 286
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F KMR KD AWS++I AYA HG+A+ ++ F+ M V+PD ITFLG+L ACSH
Sbjct: 287 IFEKMRY--KDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G ++ YF++M +G+ S HY +VD+LSRAG L +AYE I +P+ T W
Sbjct: 345 GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRI 404
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
LL AC + L LAE E++ + +YV+L+ +YA
Sbjct: 405 LLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C AL +++H ++ +D + + LI Y C + ++ VF ++ ++ VV
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI--VEPCVV 196
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
++++I+ YA AL F+EM+ +KP+ IT L VL +C+ G D +
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD-----LGKW 251
Query: 194 QRDYGVEASSDHY----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
Y + S Y + L+D+ ++ G L +A + M K T +AW A++ A N G
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDT-QAWSAMIVAYANHG 310
Query: 250 --ELGLAEIAGRASAEVEPE 267
E + S V+P+
Sbjct: 311 KAEKSMLMFERMRSENVQPD 330
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 98 HPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKE 157
H +GS LI+ Y +CG + + NVF M + K+V +SS+I A HG A+ AL F
Sbjct: 317 HVVIGSALIDMYSKCGNVEEAVNVFMSMNN--KNVFTYSSMILGLATHGRAQEALHLFHY 374
Query: 158 M-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRA 216
M +KP+ +TF+G L ACSH+G D F M + +GV+ + DHY+C+VD+L R
Sbjct: 375 MVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRT 434
Query: 217 GRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLA 276
GRL EA E+I+ M V+ WGALLGACR +AEIA E+EP+ NY+LL+
Sbjct: 435 GRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLS 494
Query: 277 KMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
+YAS G G+K T SWVV
Sbjct: 495 NVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVV 528
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 45/239 (18%)
Query: 43 DGSF-KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQL 101
+G F +AIA+Y M C + LNL ++ H R +
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYV 186
Query: 102 GSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG--------------- 146
G+ +I+ Y +C + + VF +M + +DV++W+ LI+AYA G
Sbjct: 187 GNTMIDMYVKCESIDCARKVFDEMPE--RDVISWTELIAAYARVGNMECAAELFESLPTK 244
Query: 147 ----------------EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDAL 187
+ + ALE F ME +G++ D +T G + AC+ G +AD A+
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 188 CYFTRMQRDYGVEASSDHY---SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
++ + G + SDH S L+D+ S+ G + EA V M K +LG
Sbjct: 305 ----QIAQKSGY-SPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 150/312 (48%), Gaps = 11/312 (3%)
Query: 1 MISLYAHSPDNLPTALELFH---LMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXX 57
++ LYA S D L TA LF + D+ P +N +I+ Q + + +Y M
Sbjct: 149 LLILYALSGD-LQTAGILFRSLKIRDLIP----WNAMISGYV-QKGLEQEGLFIYYDMRQ 202
Query: 58 XXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN 117
C + L K H I+ I + + S L++ Y +C +
Sbjct: 203 NRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSD 262
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
VF ++ ++V+ W+SLIS Y HG+ L+ F++M+ G +P+ +TFL VL AC
Sbjct: 263 GHRVFDQLST--RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
+H G D +F M+RDYG+E HY+ +VD L RAGRL EAYE + P K
Sbjct: 321 NHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPV 380
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXX 297
WG+LLGACR G + L E+A E++P N NYV+ A YAS G
Sbjct: 381 WGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMEN 440
Query: 298 XGVKSTTGSSWV 309
GVK G S +
Sbjct: 441 AGVKKDPGYSQI 452
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 147/272 (54%), Gaps = 4/272 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L A +LF V N + +I+ A + + + +A L+R+M
Sbjct: 262 LDNARKLFE-TSVDRNVVMWTTLISGFA-KCERAVEAFDLFRQMLRESILPNQCTLAAIL 319
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C ++ +L K +HGY IRN I+ + I+ Y RCG + + VF M + ++
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPE--RN 377
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V++WSS+I+A+ ++G + AL+ F +M+ V P+ +TF+ +L ACSH+G + F
Sbjct: 378 VISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFE 437
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M RDYGV +HY+C+VD+L RAG + EA I MPVK A AWGALL ACR E+
Sbjct: 438 SMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEV 497
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
LA +EPE ++ YVLL+ +YA G
Sbjct: 498 DLAGEIAEKLLSMEPEKSSVYVLLSNIYADAG 529
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C NV A + K +HG IR ID L + +I+ Y +C L N+ +F +D++V
Sbjct: 220 CGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET--SVDRNV 277
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
V W++LIS +A A A + F++M + P+ T +L +CS G
Sbjct: 278 VMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGY 337
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
M R+ G+E + +++ +D+ +R G + A V MP + +W +++ A FG G
Sbjct: 338 MIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER-NVISWSSMINA---FGING 392
Query: 253 LAEIAGRASAEVEPEN 268
L E A +++ +N
Sbjct: 393 LFEEALDCFHKMKSQN 408
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 144/276 (52%), Gaps = 2/276 (0%)
Query: 34 IIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRN 93
++ + +N +A+ LY +M C + +AL+L K+IHGY R
Sbjct: 279 VMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 338
Query: 94 DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALE 153
+ P+ L + LI+ Y +CGCL + +VF M+ +DVV+W+++ISAY G A+
Sbjct: 339 KLIPNLLLENALIDMYAKCGCLEKARDVFENMKS--RDVVSWTAMISAYGFSGRGCDAVA 396
Query: 154 TFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVL 213
F +++ +G+ PD I F+ L ACSHAG ++ F M Y + +H +C+VD+L
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 456
Query: 214 SRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYV 273
RAG++ EAY I+ M ++ + WGALLGACR + + +A ++ PE + YV
Sbjct: 457 GRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYV 516
Query: 274 LLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LL+ +YA G G+K G+S V
Sbjct: 517 LLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
++IHG + + +G+GL+ YG+CG L + V +M +DVV+W+SL+ YA
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR--RDVVSWNSLVVGYA 217
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+ ALE +EME + D T +L A S+
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 132/236 (55%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +++A + +EIHGY +RN + + L++ Y +CG L+ + +F + KD+V
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI--ASKDLV 566
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+ +I+ Y +HG K A+ F +M AG++ D I+F+ +L ACSH+G D+ +F M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ + +E + +HY+C+VD+L+R G L +AY I MP+ A WGALL CR ++ L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
AE E+EPEN YVL+A +YA G++ G SW+
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + ++L + +H G++ + + L++ Y +CG L ++ VF +M D + VV
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD--RSVV 363
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+++S+I+ YA G A A++ F+EME G+ PD T VL C+ D+ +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 194 -QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
+ D G + + L+D+ ++ G + EA V M VK +W ++G
Sbjct: 424 KENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVKDII-SWNTIIG 471
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 19/271 (7%)
Query: 2 ISLYAHSPDNLPTALELFHLMDVPPNESTF-NPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+SL + +L A +F +V ++ F N ++ LA D S +I L++KM
Sbjct: 135 LSLMYTNCGDLKEASRVFD--EVKIEKALFWNILMNELAKSGDFS-GSIGLFKKMMSSGV 191
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
++ +++ +++HG+ +++ +G+ L+ Y + + ++
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARK 251
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF +M ++DV++W+S+I+ Y +G A+ L F +M ++G++ D T + V C
Sbjct: 252 VFDEM--TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGC--- 306
Query: 181 GFADDALCYFTRMQRDYGVEA--SSDHYSC--LVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
AD L R GV+A S + C L+D+ S+ G L A V R M +
Sbjct: 307 --ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS 364
Query: 237 AWGALLGACRNFGELGLAEIAGRASAEVEPE 267
+ G R GLA A + E+E E
Sbjct: 365 YTSMIAGYARE----GLAGEAVKLFEEMEEE 391
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 121/284 (42%), Gaps = 22/284 (7%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +Y+ D L +A +F M + ++ +IA A + +A+ L+ +M
Sbjct: 337 LLDMYSKCGD-LDSAKAVFREMS-DRSVVSYTSMIAGYAREGLAG-EAVKLFEEMEEEGI 393
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C L+ K +H + ND+ + + L++ Y +CG + +
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFK-EMEMAGVKPDGITFLGVLKACSH 179
VFS+MR KD+++W+++I Y+ + A AL F +E PD T VL AC+
Sbjct: 454 VFSEMRV--KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA- 510
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYS------CLVDVLSRAGRLHEAYEVIRGMPVKV 233
+L F + + +G + ++S LVD+ ++ G L A+ + + K
Sbjct: 511 ------SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 234 TAKAWGALLG--ACRNFGELGLAEIAGRASAEVEPENAANYVLL 275
+W ++ FG+ +A A +E + + LL
Sbjct: 565 LV-SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 607
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 160/311 (51%), Gaps = 7/311 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +Y +S + A LF + P + + +++ +QN +A+ Y++M
Sbjct: 671 LLGMYMNSR-GMTEACALFSELSSPKSIVLWTGMMSG-HSQNGFYEEALKFYKEMRHDGV 728
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHG--YGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C +++L + IH + + +D+D + LI+ Y +CG + S
Sbjct: 729 LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT--SNTLIDMYAKCGDMKGS 786
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
VF +MR +VV+W+SLI+ YA +G A+ AL+ F M + + PD ITFLGVL ACS
Sbjct: 787 SQVFDEMRRR-SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW 238
HAG D F M YG+EA DH +C+VD+L R G L EA + I +K A+ W
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLW 905
Query: 239 GALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXX 298
+LLGACR G+ EI+ E+EP+N++ YVLL+ +YAS G
Sbjct: 906 SSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDR 965
Query: 299 GVKSTTGSSWV 309
GVK G SW+
Sbjct: 966 GVKKVPGYSWI 976
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++S+Y+ + + A ++F ++ N+ +N +I A N S K + L+ M
Sbjct: 368 LVSMYSKC-EKMEAAAKVFEALE-EKNDVFWNAMIRGYA-HNGESHKVMELFMDMKSSGY 424
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C L + + H I+ + + +G+ L++ Y +CG L ++
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQ 484
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F +M D+D V W+++I +Y A + FK M + G+ DG LKAC+H
Sbjct: 485 IFERM--CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 181 -----GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP 230
G L + RD +S L+D+ S+ G + +A +V +P
Sbjct: 543 HGLYQGKQVHCLSVKCGLDRDLHTGSS------LIDMYSKCGIIKDARKVFSSLP 591
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
+ N +IA + N +A+ L+++M C +L L + HG
Sbjct: 597 SMNALIAGYSQNNLE--EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 90 GIRNDIDPHPQ-LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+ + LG L+ Y + +C +FS++ K +V W+ ++S ++ +G
Sbjct: 655 ITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS-PKSIVLWTGMMSGHSQNGFY 713
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACS-----HAGFADDALCYFTRMQRDYGVEASS 203
+ AL+ +KEM GV PD TF+ VL+ CS G A +L + D E +S
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD---ELTS 770
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ L+D+ ++ G + + +V M + +W +L+
Sbjct: 771 N---TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
VA L+L +H I+ + + +GS L+ Y +C + + VF + +K+ V W+
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE--EKNDVFWN 397
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC--SH---AGFADDALCYFT 191
++I YA +GE+ +E F +M+ +G D TF +L C SH G ++
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
++ ++ V + LVD+ ++ G L +A ++ M + W ++G+
Sbjct: 458 KLAKNLFVG------NALVDMYAKCGALEDARQIFERMCDRDNV-TWNTIIGS 503
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
AL + K +H + ID +LG+ +++ Y +C + + F + +KDV AW+S+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL---EKDVTAWNSM 131
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC---SHAGFADDALCYFTRMQR 195
+S Y+ G+ L +F + + P+ TF VL C ++ F C +M
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM-- 189
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
G+E +S LVD+ ++ R+ +A V
Sbjct: 190 --GLERNSYCGGALVDMYAKCDRISDARRVF 218
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + ++IH I+ ++ + G L++ Y +C + ++ VF + +D + V
Sbjct: 170 CARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI--VDPNTV 227
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+ L S Y G + A+ F+ M G +PD + F+ V+ G DA F M
Sbjct: 228 CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 162/316 (51%), Gaps = 13/316 (4%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAA--LAAQNDGSFKAIALYRKMXXX 58
+I +Y S L A +F MD + T+N ++ +DG+ +AL+ +M
Sbjct: 303 LIDMYGKSK-WLEEANSIFEAMD-ERDLFTWNSVLCVHDYCGDHDGT---LALFERMLCS 357
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGY----GIRNDIDPHPQLGSGLIEAYGRCGC 114
C +A+L +EIHGY G+ N + + + L++ Y +CG
Sbjct: 358 GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 115 LVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 174
L ++ VF MR KD +W+ +I+ Y + + AL+ F M AGVKPD ITF+G+L
Sbjct: 418 LRDARMVFDSMRV--KDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
Query: 175 KACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
+ACSH+GF ++ + +M+ Y + +SDHY+C++D+L RA +L EAYE+ P+
Sbjct: 476 QACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDN 535
Query: 235 AKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXX 294
W ++L +CR G LA +AG+ E+EPE+ YVL++ +Y G
Sbjct: 536 PVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDA 595
Query: 295 XXXXGVKSTTGSSWVV 310
VK T G SW+V
Sbjct: 596 MRQQNVKKTPGCSWIV 611
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 84 KEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
++IHG+ +R +D P+ G+ L+ Y +CG + + VF ++DV +++LIS +
Sbjct: 80 QQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS---ERDVFGYNALISGF 136
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
++G A+ET++EM G+ PD TF +LK +D + + +
Sbjct: 137 VVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGF----D 192
Query: 203 SDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
SD Y S LV S+ + +A +V +P + + W AL+
Sbjct: 193 SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALV 234
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 8/189 (4%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+ IHG ++ + + LI+ YG+ L + ++F M ++D+ W+S++ +
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD--ERDLFTWNSVLCVHD 339
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-AGFADDALCYFTRMQRDYGVEAS 202
G+ L F+ M +G++PD +T VL C A + + S
Sbjct: 340 YCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKS 399
Query: 203 SDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG--ACRNFGELGLAEIAG 258
S+ + + L+D+ + G L +A V M VK +A +W ++ ++ GEL L +
Sbjct: 400 SNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSA-SWNIMINGYGVQSCGELALDMFSC 458
Query: 259 RASAEVEPE 267
A V+P+
Sbjct: 459 MCRAGVKPD 467
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L+ +K++HG + D +GSGL+ +Y + + ++ VF ++ D D D V W++L+
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRD-DSVLWNALV 234
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 186
+ Y+ + AL F +M GV T VL A + +G D+
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNG 281
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 152/300 (50%), Gaps = 6/300 (2%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSF-KAIALYRKMXXXXXXXXXXXXXX 69
NL A F M V S I L A G F +++ ++R+M
Sbjct: 317 NLKLARTYFDQMPVRDRISWTIMIDGYLRA---GCFNESLEIFREMQSAGMIPDEFTMVS 373
Query: 70 XXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
C ++ +L + + I Y +N I +G+ LI+ Y +CGC + VF M D
Sbjct: 374 VLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRD 433
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
K W++++ A +G+ + A++ F +M+ ++PD IT+LGVL AC+H+G D A +
Sbjct: 434 K--FTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF 491
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
F +M+ D+ +E S HY C+VD+L RAG + EAYE++R MP+ + WGALLGA R
Sbjct: 492 FAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN 551
Query: 250 ELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ +AE+A + E+EP+N A Y LL +YA +K T G S +
Sbjct: 552 DEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 33/139 (23%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C V +L K +H Y +P +L + L+ AY CG + + +F M+ +DV+
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK--ARDVI 303
Query: 134 AWSSLISAYALHGEAKAA-------------------------------LETFKEMEMAG 162
+W+S++ Y G K A LE F+EM+ AG
Sbjct: 304 SWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAG 363
Query: 163 VKPDGITFLGVLKACSHAG 181
+ PD T + VL AC+H G
Sbjct: 364 MIPDEFTMVSVLTACAHLG 382
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 10/175 (5%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H + ++ + + + + L++ Y CG + + VF R +DV +W+ +IS Y
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD--RRCKEDVFSWNLMISGYN 212
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR---DYGVE 200
E + ++E EME V P +T L VL ACS D LC R+ + E
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKV--KDKDLC--KRVHEYVSECKTE 268
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
S + LV+ + G + A + R M + +W +++ G L LA
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLAR 322
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 144/278 (51%), Gaps = 4/278 (1%)
Query: 35 IAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND 94
+ A QN KA LY + C +A L L + IH + ++
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC 340
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
++ +GS L++ YG+CGC+ +S F +M + K++V +SLI YA G+ AL
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE--KNLVTRNSLIGGYAHQGQVDMALAL 398
Query: 155 FKEM--EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDV 212
F+EM G P+ +TF+ +L ACS AG ++ + F M+ YG+E ++HYSC+VD+
Sbjct: 399 FEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDM 458
Query: 213 LSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANY 272
L RAG + AYE I+ MP++ T WGAL ACR G+ L +A +++P+++ N+
Sbjct: 459 LGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNH 518
Query: 273 VLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
VLL+ +A+ G G+K G SW+
Sbjct: 519 VLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWIT 556
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + LNL ++HG +R+ D + +GLI+ YG+C + +S +F++M K+ V
Sbjct: 219 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG--TKNAV 276
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W SL++AY + E + A + V+ VL AC AG A L R
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMAGLEL---GRS 331
Query: 194 QRDYGVEASSDHY----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+ V+A + S LVD+ + G + ++ + MP K +L+G + G
Sbjct: 332 IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR-NSLIGGYAHQG 390
Query: 250 ELGLA 254
++ +A
Sbjct: 391 QVDMA 395
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 140/269 (52%), Gaps = 3/269 (1%)
Query: 46 FKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGL 105
FKA+ +Y +M C +AAL K+IH + ++ L S L
Sbjct: 392 FKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSAL 451
Query: 106 IEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKP 165
++ Y +CG + +F+ + KDVV+W+ +ISAY HG+ + AL F EM+ G+KP
Sbjct: 452 LDMYSKCGNEKEAFRIFNSIPK--KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 166 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
DG+T L VL AC HAG D+ L +F++M+ YG+E +HYSC++D+L RAGRL EAYE+
Sbjct: 510 DGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI 569
Query: 226 IRGMP-VKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGX 284
I+ P A+ L AC E L + R E P++A+ Y++L +YAS
Sbjct: 570 IQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGES 629
Query: 285 XXXXXXXXXXXXXXGVKSTTGSSWVVYSE 313
G++ G SW+ S+
Sbjct: 630 WDAARRVRLKMKEMGLRKKPGCSWIEMSD 658
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 12/244 (4%)
Query: 10 DNLPTALELFHLMDVPPNES--TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXX 67
D L A E+F M P +S +N +I A+ D S + + +M
Sbjct: 257 DCLEVAREVFQKM---PRKSLVAWNSMIKGYVAKGD-SKSCVEILNRMIIEGTRPSQTTL 312
Query: 68 XXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD 127
C L K IHGY IR+ ++ + LI+ Y +CG + VFSK +
Sbjct: 313 TSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ- 371
Query: 128 MDKDVV-AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 186
KDV +W+ +IS+Y G A+E + +M GVKPD +TF VL ACS +
Sbjct: 372 --KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKG 429
Query: 187 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACR 246
+ + +E S L+D+ S+ G EA+ + +P K +W ++ A
Sbjct: 430 KQIHLSIS-ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV-SWTVMISAYG 487
Query: 247 NFGE 250
+ G+
Sbjct: 488 SHGQ 491
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 12 LPTALELFHLMDVPPNE-STFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+L++F ++P + +++N +I+ + KA+ L+ +M
Sbjct: 158 FENSLQVFD--EMPERDVASWNTVISCFYQSGEAE-KALELFGRMESSGFEPNSVSLTVA 214
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + L KEIH ++ + + S L++ YG+C CL + VF KM K
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP--RK 272
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+VAW+S+I Y G++K+ +E M + G +P T +L ACS +
Sbjct: 273 SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+ IH +++ + S L+ Y + NS VF +M + +DV +W+++IS +
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE--RDVASWNTVISCFY 184
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
GEA+ ALE F ME +G +P+ ++ + ACS + + R G E
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGK-EIHRKCVKKGFELDE 243
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
S LVD+ + L A EV + MP K + AW +++
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRK-SLVAWNSMI 281
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 130/239 (54%), Gaps = 7/239 (2%)
Query: 74 CVNVAALNLIKEIHGYGIR---NDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + A + K +H YG N +D + + + LI+ YG+CG + + VF ++ +
Sbjct: 198 CAKLGAFDFGKWVHKYGETLGYNKVDVNVK--NALIDMYGKCGAIEIAMEVFKGIKR--R 253
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
D+++W+++I+ A HG AL F EM+ +G+ PD +TF+GVL AC H G +D L YF
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYF 313
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M D+ + +H C+VD+LSRAG L +A E I MPVK A W LLGA + + +
Sbjct: 314 NSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKK 373
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ + E+A ++EP N AN+V+L+ +Y G G K G SW+
Sbjct: 374 VDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWI 432
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 157/286 (54%), Gaps = 6/286 (2%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
+++T+N +I+ QN + K ++RKM C + +++L K++
Sbjct: 485 DQATWNSMISGYT-QNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
HG+ IR +D + + S L++ Y + G + + ++FS+ ++ ++ V ++++I Y HG
Sbjct: 544 HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE--RNSVTYTTMILGYGQHG 601
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
+ A+ F M+ +G+KPD ITF+ VL ACS++G D+ L F M+ Y ++ SS+HY
Sbjct: 602 MGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHY 661
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVK-VTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
C+ D+L R GR++EAYE ++G+ + A+ WG+LLG+C+ GEL LAE A+ +
Sbjct: 662 CCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFD 721
Query: 266 P-ENAANY-VLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+N + Y VLL+ MYA G+K G S +
Sbjct: 722 KGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K+ H + IR I + S LI+ Y + G + S +F ++D W+S+IS Y
Sbjct: 439 KQTHAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYT 497
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD--DALCYFT-RMQRDYGVE 200
+G + F++M ++P+ +T +L ACS G D L F+ R D V
Sbjct: 498 QNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVF 557
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
+ S LVD+ S+AG + A ++ + + +LG +G+ G+ E A
Sbjct: 558 VA----SALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG----YGQHGMGERA 606
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 2 ISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXX 61
IS+YA D + ++ +F V N +N +I + QND ++I L+ +
Sbjct: 258 ISMYAELGD-IESSRRVFDSC-VERNIEVWNTMIG-VYVQNDCLVESIELFLEAIGSKEI 314
Query: 62 XXXXXXXXXXXXCVN-VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
V+ + + L ++ HG+ +N + + + L+ Y RCG + S
Sbjct: 315 VSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFG 374
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF MR+ +DVV+W+++ISA+ +G L EM+ G K D IT +L A S+
Sbjct: 375 VFLSMRE--RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASN 431
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 137/269 (50%), Gaps = 2/269 (0%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN + +A+ LYR+M C ++A L L K++HG+ I++
Sbjct: 400 QNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP 459
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+GS L Y +CG L + VF R +KDVV+W+++IS + +G+ ALE F+EM
Sbjct: 460 IGSALSTMYSKCGSLEDGNLVFR--RTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G++PD +TF+ ++ ACSH GF + YF M G++ DHY+C+VD+LSRAG+L
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLK 577
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
EA E I + W LL AC+N G+ L AG + ++ YV L+ +Y
Sbjct: 578 EAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYT 637
Query: 281 SVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++G GV G SW+
Sbjct: 638 ALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N T++ ++ + QN S +A+ L+ +M C ++ L K++
Sbjct: 286 NSITWSAMVTGYS-QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H + ++ + H + L++ Y + GCL ++ F +++ +DV W+SLIS Y +
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE--RDVALWTSLISGYVQNS 402
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSH-AGFADDALCYFTRMQRDYGVEASSDH 205
+ + AL ++ M+ AG+ P+ T VLKACS A + ++ +G+E
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG- 461
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
S L + S+ G L + V R P K +W A++ + G+
Sbjct: 462 -SALSTMYSKCGSLEDGNLVFRRTPNKDVV-SWNAMISGLSHNGQ 504
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
+ L ++IH I+N + L + L+ Y +C L +C +F D++ + WS+++
Sbjct: 237 VGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS--SGDRNSITWSAMV 294
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
+ Y+ +GE+ A++ F M AG+KP T +GVL ACS + ++ + + + G
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGF 353
Query: 200 EASSDHYSCLVDVLSRAGRLHEA 222
E + LVD+ ++AG L +A
Sbjct: 354 ERHLFATTALVDMYAKAGCLADA 376
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 81 NLI--KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
NL+ + +HG IR Q + L+ Y +CG L + ++F+ + + KDVV+W+SL
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI--ICKDVVSWNSL 86
Query: 139 ISAYALHG---EAKAALETFKEMEMAGVKPDGITFLGVLKA-----CSHAGFADDALCYF 190
I+ Y+ +G + ++ F+EM + P+ T G+ KA S G AL
Sbjct: 87 ITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK 146
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
D V+ S LV + +AG + + +V MP + T W ++
Sbjct: 147 MSSFGDIYVDTS------LVGMYCKAGLVEDGLKVFAYMPERNTY-TWSTMV 191
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 145/280 (51%), Gaps = 3/280 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N +I A QN A+ + +M ++ + K IHG
Sbjct: 405 SWNAMILGFA-QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
+R+ +D + + + L++ Y +CG ++ + +F M + + V W+++I Y HG K
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE--RHVTTWNAMIDGYGTHGFGK 521
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
AALE F+EM+ +KP+G+TFL V+ ACSH+G + L F M+ +Y +E S DHY +
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
VD+L RAGRL+EA++ I MPVK +GA+LGAC+ + AE A E+ P++
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 270 ANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+VLLA +Y + G++ T G S V
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Query: 77 VAALNLI---KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
V+AL LI KEIHGY +R+ D + + L++ Y +CG L + +F M ++++VV
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM--LERNVV 303
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
+W+S+I AY + K A+ F++M GVKP ++ +G L AC+ G
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 10/201 (4%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
KA+ + +M C + A L + KEIHG +++ +GL
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y +C + + VF +M + +D+V+W+++++ Y+ +G A+ ALE K M +KP
Sbjct: 178 NMYAKCRQVNEARKVFDRMPE--RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 167 GITFLGVLKACSH---AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAY 223
IT + VL A S + Y R D V S + LVD+ ++ G L A
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS----TALVDMYAKCGSLETAR 291
Query: 224 EVIRGMPVKVTAKAWGALLGA 244
++ GM ++ +W +++ A
Sbjct: 292 QLFDGM-LERNVVSWNSMIDA 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 15/271 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +YA +L TA +LF M + N ++N +I A QN+ +A+ +++KM
Sbjct: 277 LVDMYAKC-GSLETARQLFDGM-LERNVVSWNSMIDAYV-QNENPKEAMLIFQKMLDEGV 333
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++ L + IH + +D + + + LI Y +C + + +
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F K++ + +V+W+++I +A +G AL F +M VKPD T++ V+ A +
Sbjct: 394 MFGKLQS--RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 181 GFADDALCYFTRMQR---DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
A + R D V + + LVD+ ++ G + A +I M +
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVT----TALVDMYAKCGAIMIA-RLIFDMMSERHVTT 506
Query: 238 WGALLG--ACRNFGELGLAEIAGRASAEVEP 266
W A++ FG+ L ++P
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 135/234 (57%), Gaps = 3/234 (1%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N+A++ L +E H ++ ++ +P + + L++ Y +CG ++ F +DVV W
Sbjct: 567 NLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA--ASRDVVCW 624
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+S+IS+YA HGE K AL+ ++M G++P+ ITF+GVL ACSHAG +D L F M R
Sbjct: 625 NSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR 684
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
+G+E ++HY C+V +L RAGRL++A E+I MP K A W +LL C G + LAE
Sbjct: 685 -FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAE 743
Query: 256 IAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A + +P+++ ++ +L+ +YAS G GV G SW+
Sbjct: 744 HAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 10/229 (4%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A+ ++R M ++ +L L K+IHG + ++ GS LI
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI 496
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y C CL +S VF +M+ KD+V W+S+ + Y E + AL F E++++ +PD
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKV--KDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
TF ++ A + + ++ + G+E + + L+D+ ++ G +A++
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHKAF 613
Query: 227 RGMPVKVTAKAWGALLGACRNFGE--LGLAEIAGRASAEVEPENAANYV 273
+ W +++ + N GE L + S +EP NY+
Sbjct: 614 DSAASRDVV-CWNSVISSYANHGEGKKALQMLEKMMSEGIEP----NYI 657
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K+IH + +R ++ L + LI++Y +CG ++ + +F+ M + K++++W++L+S Y
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN--KNIISWTTLLSGYK 326
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS--HA-GFADDALCY----------- 189
+ K A+E F M G+KPD +L +C+ HA GF Y
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 190 --------------FTRMQRDYGVEASSD--HYSCLVDVLSRAG---RLHEAYEVIRGMP 230
T ++ + + A++D ++ +++ SR G LHEA + R M
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 231 VKVTAKA---WGALLGACRNFGELGLAE 255
++ + + +LL A + LGL++
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSK 474
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
++ ++ + +++ D +G+ LI+ Y + G + + VF + + K V W+++IS
Sbjct: 166 MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE--KSTVTWTTMISG 223
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
G + +L+ F ++ V PDG VL ACS F + + R YG+E
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEM 282
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
+ + L+D + GR+ A+++ GMP K +W LL +
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLLSGYKQ 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ AL ++H Y I+ ++ + + LI+ Y +C CL ++ VF DVV
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF--AAADVV 417
Query: 134 AWSSLISAYALHG---EAKAALETFKEMEMAGVKPDGITFLGVLKA---CSHAGFADDAL 187
++++I Y+ G E AL F++M ++P +TF+ +L+A + G +
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ-- 475
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
+ YG+ S L+DV S L ++ V M VK
Sbjct: 476 --IHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK 518
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L K++HGY R DP+ S L++ Y +CG + ++ +V D+V
Sbjct: 329 CADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC--PKPDLV 386
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+SLI A +G+ AL+ F + +G KPD +TF+ VL AC+HAG + L +F +
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ + +SDHY+CLVD+L+R+GR + VI MP+K + W ++LG C +G + L
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDL 506
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
AE A + ++EPEN YV +A +YA+ G GV GSSW
Sbjct: 507 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWT 562
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
KEIHG+ +R +D L S L++ YG+CGC+ + N+F K+ ++KDVV+W+S+I Y
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI--VEKDVVSWTSMIDRYF 295
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC---SHAGFADDALCYFTRMQRDYGVE 200
+ F E+ + +P+ TF GVL AC + Y TR+ G +
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV----GFD 351
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
S S LVD+ ++ G + A V+ G P K +W +L+G C G+
Sbjct: 352 PYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQ 400
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 148/285 (51%), Gaps = 6/285 (2%)
Query: 26 PNES--TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXX-XCVNVAALNL 82
PN ++N II+ A QN + +AI +Y M C AL
Sbjct: 411 PNTDVISWNTIISGYA-QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
++HG ++N + + + L + YG+CG L ++ ++F ++ ++ V W++LI+ +
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS--VPWNTLIACH 527
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
HG + A+ FKEM GVKPD ITF+ +L ACSH+G D+ F MQ DYG+ S
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 587
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
HY C+VD+ RAG+L A + I+ M ++ A WGALL ACR G + L +IA
Sbjct: 588 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLF 647
Query: 263 EVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
EVEPE+ +VLL+ MYAS G G++ T G S
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 117/256 (45%), Gaps = 19/256 (7%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N II A N+ +AI+L+++M + + + + G+
Sbjct: 315 SWNSIIKAYEL-NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF 373
Query: 90 GIRN-----DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
+R DI +G+ ++ Y + G + ++ VF+ + + DV++W+++IS YA
Sbjct: 374 TLRKGWFLEDI----TIGNAVVVMYAKLGLVDSARAVFNWLPN--TDVISWNTIISGYAQ 427
Query: 145 HGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+G A A+E + ME G + + T++ VL ACS AG + R+ ++ G+
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDV 486
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF---GELGLAEIAGRA 260
+ L D+ + GRL +A + +P +V + W L+ AC F GE +
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLI-ACHGFHGHGEKAVMLFKEML 544
Query: 261 SAEVEPENAANYVLLA 276
V+P++ LL+
Sbjct: 545 DEGVKPDHITFVTLLS 560
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N IH Y I++ ++ + + LI+ Y G L + VF +M +D++
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM--YVRDLI 314
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
+W+S+I AY L+ + A+ F+EM ++ ++PD +T + + S G
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 132/251 (52%), Gaps = 3/251 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+N +I+ + QN ++ + LY +M C ++ A + E+
Sbjct: 224 TWNAVISGYS-QNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKL 282
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
N P+ + + I Y RCG L + VF M K +V+W+++I Y +HG +
Sbjct: 283 VESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV--KSLVSWTAMIGCYGMHGMGE 340
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
L F +M G++PDG F+ VL ACSH+G D L F M+R+Y +E +HYSCL
Sbjct: 341 IGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCL 400
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
VD+L RAGRL EA E I MPV+ WGALLGAC+ + +AE+A E EP N
Sbjct: 401 VDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNI 460
Query: 270 ANYVLLAKMYA 280
YVL++ +Y+
Sbjct: 461 GYYVLMSNIYS 471
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 7/248 (2%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
+N +I+ A N A ++R+M C L L + +HG
Sbjct: 124 YNALISGYTA-NSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC 182
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
++ +D + + I Y +CG + +F +M K ++ W+++IS Y+ +G A
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPV--KGLITWNAVISGYSQNGLAYD 240
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 210
LE +++M+ +GV PD T + VL +C+H G A ++ G + + +
Sbjct: 241 VLELYEQMKSSGVCPDPFTLVSVLSSCAHLG-AKKIGHEVGKLVESNGFVPNVFVSNASI 299
Query: 211 DVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG--ACRNFGELGLAEIAGRASAEVEPEN 268
+ +R G L +A V MPVK + +W A++G GE+GL + P+
Sbjct: 300 SMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 269 AANYVLLA 276
A ++L+
Sbjct: 359 AVFVMVLS 366
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 29 STFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
+ +N + LA Q+ S ++I+LYR M C +++ +++H
Sbjct: 19 TPWNVRLRELAYQSLFS-ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+ + + P + + LI Y +CG + ++ VF + + V +++LIS Y + +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACS 178
A F+ M+ GV D +T LG++ C+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCT 167
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I +YA + + TA++LF + NE ++N +I +G KA +++R+
Sbjct: 389 LIDVYAKC-EKMDTAVKLFAELS-SKNEVSWNTVIVGYENLGEGG-KAFSMFREALRNQV 445
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++A+++L ++HG I+ + + + LI+ Y +CG + + +
Sbjct: 446 SVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQS 505
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF++M +D V +W++LIS Y+ HG + AL M+ KP+G+TFLGVL CS+A
Sbjct: 506 VFNEMETID--VASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNA 563
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D F M RD+G+E +HY+C+V +L R+G+L +A ++I G+P + + W A
Sbjct: 564 GLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRA 623
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
+L A N A + ++ P++ A YVL++ MYA GV
Sbjct: 624 MLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGV 683
Query: 301 KSTTGSSWV 309
K G SW+
Sbjct: 684 KKEPGLSWI 692
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+ + A + K +HG ++ P++G GL++ Y + G + ++ VF++M DVV
Sbjct: 258 IGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPK--NDVVP 315
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS---HAGFADDALCYFT 191
WS +I+ + +G A++ F M A V P+ T +L C+ +G +
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
++ D + S + L+DV ++ ++ A ++ + K +W ++ N GE
Sbjct: 376 KVGFDLDIYVS----NALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVIVGYENLGEG 430
Query: 252 GLA 254
G A
Sbjct: 431 GKA 433
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H ++ D + +G+ LI AY CG + ++ VF + + KD+V W+ ++S Y +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI--LCKDIVVWAGIVSCYVEN 225
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA---------LCYFTRMQRD 196
G + +L+ M MAG P+ TF LKA G D A CY +
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA-CRN 247
G L+ + ++ G + +A++V MP K W ++ C+N
Sbjct: 286 VG----------LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIARFCQN 326
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 149/284 (52%), Gaps = 4/284 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALY-RKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
++ +++ +I +A ++GSF LY R++ C + K
Sbjct: 233 DDVSWSTMIVGIA--HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKI 290
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+HG+ + + + LI+ Y RCG + + VF M++ + +V+W+S+I+ A+H
Sbjct: 291 LHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE-KRCIVSWTSMIAGLAMH 349
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G+ + A+ F EM GV PDGI+F+ +L ACSHAG ++ YF+ M+R Y +E +H
Sbjct: 350 GQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEH 409
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y C+VD+ R+G+L +AY+ I MP+ TA W LLGAC + G + LAE + E++
Sbjct: 410 YGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELD 469
Query: 266 PENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
P N+ + VLL+ YA+ G +K TT S V
Sbjct: 470 PNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLV 513
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
++ Y + G L ++ +FS+M +D V+WS++I A +G + F+E++ AG+
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPH--RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 165 PDGITFLGVLKACSHAG-FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAY 223
P+ ++ GVL ACS +G F + + + Y S + + L+D+ SR G + A
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVN--NALIDMYSRCGNVPMAR 324
Query: 224 EVIRGMPVKVTAKAWGALLGACRNFGE 250
V GM K +W +++ G+
Sbjct: 325 LVFEGMQEKRCIVSWTSMIAGLAMHGQ 351
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 151/310 (48%), Gaps = 9/310 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I LY D L A +F + N T+N +IA+ + S KAIAL+ +M
Sbjct: 474 LIDLYGKMGD-LTVAWRMF--CEADTNVITWNAMIASYV-HCEQSEKAIALFDRMVSENF 529
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
CVN +L + IH Y + + + L + LI+ Y +CG L S
Sbjct: 530 KPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRE 589
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F KD V W+ +IS Y +HG+ ++A+ F +ME + VKP G TFL +L AC+HA
Sbjct: 590 LFDAGNQ--KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHA 647
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G + F +M + Y V+ + HYSCLVD+LSR+G L EA + MP WG
Sbjct: 648 GLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGT 706
Query: 241 LLGACRNFGELGLA-EIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
LL +C GE + +A RA A +P+N Y++LA MY++ G G
Sbjct: 707 LLSSCMTHGEFEMGIRMAERAVAS-DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESG 765
Query: 300 VKSTTGSSWV 309
V G S V
Sbjct: 766 VGKRAGHSVV 775
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 115/270 (42%), Gaps = 14/270 (5%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L A +LF + N+ +N ++ K I L+RK+
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMK-CHVKCIELFRKIQNLGIEIDSASATSVI 440
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C ++ A+ L K +H Y ++ +D + + LI+ YG+ G L + +F + D +
Sbjct: 441 SSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFC---EADTN 497
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC--- 188
V+ W+++I++Y +++ A+ F M KP IT + +L AC + G +
Sbjct: 498 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
Y T + + + S + L+D+ ++ G L ++ E+ K A W ++
Sbjct: 558 YITETEHEMNLSLS----AALIDMYAKCGHLEKSRELFDAGNQK-DAVCWNVMISGYGMH 612
Query: 249 GEL--GLAEIAGRASAEVEPENAANYVLLA 276
G++ +A ++V+P LL+
Sbjct: 613 GDVESAIALFDQMEESDVKPTGPTFLALLS 642
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 12/232 (5%)
Query: 1 MISLYA-HSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
+IS YA + NL + +FHL+ + +N II A + D + +++ + M
Sbjct: 65 LISSYASYGKPNLSS--RVFHLV-TRRDIFLWNSIIKAHFSNGDYA-RSLCFFFSMLLSG 120
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNS 118
C + ++ +HG +++ D + +G+ + Y +CG L ++
Sbjct: 121 QSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDA 180
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGV---KPDGITFLGVLK 175
C VF +M D +DVVAW+++IS + +GE++ L +M AG KP+ T +
Sbjct: 181 CLVFDEMPD--RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQ 238
Query: 176 ACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
ACS+ G + C ++ G+ +S S + S++G EAY R
Sbjct: 239 ACSNLGALKEGRCLHGFAVKN-GLASSKFVQSSMFSFYSKSGNPSEAYLSFR 289
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM-DKDV 132
C N+ AL + +HG+ ++N + + S + Y + G N + R++ D+D+
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSG---NPSEAYLSFRELGDEDM 296
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGIT 169
+W+S+I++ A G+ + + + F EM+ G+ PDG+
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 149/291 (51%), Gaps = 7/291 (2%)
Query: 21 LMDVPP----NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVN 76
L+++ P NE ++ +I+ A S +AI ++++M C +
Sbjct: 204 LLEMMPCWVRNEVSWTCVISGYAKSGRAS-EAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+ +L L + I Y ++ L + +I+ Y + G + + +VF + + ++VV W+
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE--RNVVTWT 320
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
++I+ A HG AL F M AGV+P+ +TF+ +L ACSH G+ D F M+
Sbjct: 321 TIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSK 380
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEI 256
YG+ + +HY C++D+L RAG+L EA EVI+ MP K A WG+LL A +L L E
Sbjct: 381 YGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGER 440
Query: 257 AGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
A ++EP N+ NY+LLA +Y+++G GVK G S
Sbjct: 441 ALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGES 491
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIAL--YRKMXXXXXXXXXXXXXXXXXXCVNVAALNLI 83
PN N +I AL+ ++ + +IA+ YRK+ V V+ +
Sbjct: 76 PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 135
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCG-----------CLVNSCNVFS-------KM 125
++IHG + D + +GLI+ Y CG LV NV++ K+
Sbjct: 136 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 195
Query: 126 RDMD-------------KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 172
+MD ++ V+W+ +IS YA G A A+E F+ M M V+PD +T L
Sbjct: 196 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 255
Query: 173 VLKACSHAGFAD--DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP 230
VL AC+ G + + +C + + G+ + + ++D+ +++G + +A +V +
Sbjct: 256 VLSACADLGSLELGERICSYVDHR---GMNRAVSLNNAVIDMYAKSGNITKALDVFECVN 312
Query: 231 VKVTAKAWGALLG--ACRNFGELGLAEIAGRASAEVEPENAANYVLLA 276
+ W ++ A G LA A V P + +L+
Sbjct: 313 ER-NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILS 359
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 141/270 (52%), Gaps = 7/270 (2%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN KAI ++R+M C +AA+ L KEIHG +R +
Sbjct: 343 QNGEHEKAIEIFREMEEKDLYCFGTVLKA----CAGLAAVRLGKEIHGQYVRRGCFGNVI 398
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ S LI+ YG+ GC+ ++ V+SKM ++++ W++++SA A +G + A+ F +M
Sbjct: 399 VESALIDLYGKSGCIDSASRVYSKMSI--RNMITWNAMLSALAQNGRGEEAVSFFNDMVK 456
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G+KPD I+F+ +L AC H G D+ YF M + YG++ ++HYSC++D+L RAG
Sbjct: 457 KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFE 516
Query: 221 EAYEVIRGMPVKVTAKAWGALLGAC-RNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
EA ++ + A WG LLG C N +AE + E+EP+ +YVLL+ MY
Sbjct: 517 EAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMY 576
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++G GV T G SW+
Sbjct: 577 KAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ L KEIHG I N I + + S L++ YG+CG + + VF+ M K+ V
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS--KKNSV 332
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS+L+ Y +GE + A+E F+EME + D F VLKAC AG A L
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKAC--AGLAAVRLGKEIHG 386
Query: 194 QR-DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
Q G + S L+D+ ++G + A V M ++ W A+L A
Sbjct: 387 QYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 6/203 (2%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
KA+ ++ +M C + + L + HG I + + + + S L
Sbjct: 146 KALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLA 205
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMA-GVKP 165
YG V++ VF +M + DV+ W++++SA++ + + AL F M G+ P
Sbjct: 206 YLYGVNREPVDARRVFDEMPE--PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVP 263
Query: 166 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
DG TF VL AC + ++ + G+ ++ S L+D+ + G + EA +V
Sbjct: 264 DGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQV 322
Query: 226 IRGMPVKVTAKAWGALLGA-CRN 247
GM K + +W ALLG C+N
Sbjct: 323 FNGMS-KKNSVSWSALLGGYCQN 344
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 149/299 (49%), Gaps = 6/299 (2%)
Query: 12 LPTALELFHLMDVPPNEST-FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+ ALELF DV ++ + +I L +N KA+ L+R+M
Sbjct: 205 IKEALELFQ--DVKIKDTVCWTAMIDGLV-RNKEMNKALELFREMQMENVSANEFTAVCV 261
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C ++ AL L + +H + ++ +G+ LI Y RCG + + VF MRD K
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD--K 319
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
DV++++++IS A+HG + A+ F++M G +P+ +T + +L ACSH G D L F
Sbjct: 320 DVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVF 379
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M+R + VE +HY C+VD+L R GRL EAY I +P++ G LL AC+ G
Sbjct: 380 NSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN 439
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ L E + E E ++ YVLL+ +YAS G G++ G S +
Sbjct: 440 MELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTI 498
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 95/238 (39%), Gaps = 44/238 (18%)
Query: 32 NPIIAALAAQNDG------SFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
NP + A DG S ++LY +M C L + +E
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCRE 144
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD---------------- 129
IH ++ +G ++E YG+ G LVN+ +F +M D D
Sbjct: 145 IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 204
Query: 130 -------------KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
KD V W+++I + E ALE F+EM+M V + T + VL A
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 264
Query: 177 CSHAGFADDA--LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
CS G + + F QR +E S+ + L+++ SR G ++EA V R M K
Sbjct: 265 CSDLGALELGRWVHSFVENQR---MELSNFVGNALINMYSRCGDINEARRVFRVMRDK 319
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 158/310 (50%), Gaps = 6/310 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++SLY H + L T LF M+ + ++N +I QN +A+ ++R+M
Sbjct: 537 VLSLYIHCGE-LCTVQALFDAME-DKSLVSWNTVITGYL-QNGFPDRALGVFRQMVLYGI 593
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + +L L +E H Y +++ ++ + LI+ Y + G + S
Sbjct: 594 QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF+ +++ K +W+++I Y +HG AK A++ F+EM+ G PD +TFLGVL AC+H+
Sbjct: 654 VFNGLKE--KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 711
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI-RGMPVKVTAKAWG 239
G + L Y +M+ +G++ + HY+C++D+L RAG+L +A V+ M + W
Sbjct: 712 GLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 771
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
+LL +CR L + E E+EPE NYVLL+ +YA +G
Sbjct: 772 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMS 831
Query: 300 VKSTTGSSWV 309
++ G SW+
Sbjct: 832 LRKDAGCSWI 841
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 12/176 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L K +HG+ ++ +D L + L++ Y +CGC+ N+ +F KM + +K+VV
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KMNN-NKNVV 359
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAG--VKPDGITFLGVLKACSHAGF---ADDALC 188
+W++++ ++ G+ + ++M G VK D +T L + C H F + C
Sbjct: 360 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
Y + + Y + + V ++ G L A V G+ K T +W AL+G
Sbjct: 420 YSLKQEFVYNELVA----NAFVASYAKCGSLSYAQRVFHGIRSK-TVNSWNALIGG 470
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 16/241 (6%)
Query: 29 STFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
+++N +I A ND ++ + +M C + +L L KE+HG
Sbjct: 462 NSWNALIGGHAQSNDPRL-SLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+ IRN ++ + ++ Y CG L +F M DK +V+W+++I+ Y +G
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAME--DKSLVSWNTVITGYLQNGFP 578
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACS---HAGFADDALCY-FTRMQRDYGVEASSD 204
AL F++M + G++ GI+ + V ACS +A Y + D A S
Sbjct: 579 DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS- 637
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
L+D+ ++ G + ++ +V G+ K TA +W A++ +G GLA+ A + E+
Sbjct: 638 ----LIDMYAKNGSITQSSKVFNGLKEKSTA-SWNAMI---MGYGIHGLAKEAIKLFEEM 689
Query: 265 E 265
+
Sbjct: 690 Q 690
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 14 TALELFHLMDVPPNESTFNPIIAALAAQND--GSFKAIALYRKMXX--XXXXXXXXXXXX 69
T ++ M+ N ++N ++ +A+ D G+F + R+M
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL---RQMLAGGEDVKADEVTILN 400
Query: 70 XXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
C + + L +KE+H Y ++ + + + + + +Y +CG L + VF +R
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS-- 458
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
K V +W++LI +A + + +L+ +M+++G+ PD T +L ACS
Sbjct: 459 KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 126/226 (55%), Gaps = 3/226 (1%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+HG IR + L S LI+ Y +CG + + VF +KDV W+S+I+ A H
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTA--TEKDVALWTSMITGLAFH 447
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G + AL+ F M+ GV P+ +T L VL ACSH+G ++ L F M+ +G + ++H
Sbjct: 448 GNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEH 507
Query: 206 YSCLVDVLSRAGRLHEAYEVI-RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
Y LVD+L RAGR+ EA +++ + MP++ + WG++L ACR ++ AE+A ++
Sbjct: 508 YGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKL 567
Query: 265 EPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
EPE YVLL+ +YA+VG GVK T G S VV
Sbjct: 568 EPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVV 613
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 136/262 (51%), Gaps = 4/262 (1%)
Query: 49 IALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEA 108
+ LY KM C AL + +H + + + + + LI
Sbjct: 206 LKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISM 265
Query: 109 YGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFK-EMEMAGVKPDG 167
Y +CG L ++ +F + + KDVV+W+S+I+ YA HG A A+E F+ M +G KPD
Sbjct: 266 YCKCGDLKDAFRIFDQFSN--KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDA 323
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
IT+LGVL +C HAG + +F M ++G++ +HYSCLVD+L R G L EA E+I
Sbjct: 324 ITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIE 382
Query: 228 GMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXX 287
MP+K + WG+LL +CR G++ A +EP+ AA +V LA +YASVG
Sbjct: 383 NMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKE 442
Query: 288 XXXXXXXXXXXGVKSTTGSSWV 309
G+K+ G SW+
Sbjct: 443 AATVRKLMKDKGLKTNPGCSWI 464
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+ AL LF M N ++ +I+ Q D + +A+ L+ +M
Sbjct: 196 KMDIALTLFRKM-AEKNAISWTTMISGYV-QADMNKEALQLFHEMQNSDVEPDNVSLANA 253
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + AL K IH Y + I LG LI+ Y +CG + + VF ++ K
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK--K 311
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
V AW++LIS YA HG + A+ F EM+ G+KP+ ITF VL ACS+ G ++ F
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M+RDY ++ + +HY C+VD+L RAG L EA I+ MP+K A WGALL ACR
Sbjct: 372 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 431
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYA 280
+ L E G ++P + YV A ++A
Sbjct: 432 IELGEEIGEILIAIDPYHGGRYVHKANIHA 461
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 132/240 (55%), Gaps = 4/240 (1%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+A L+ K+ H + +R ++ + L + LI+ Y +CG L + +F M + + ++W+
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPE--RTAISWN 324
Query: 137 SLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM-Q 194
+++ Y+ HG + LE F+ M + VKPD +T L VL CSH D L F M
Sbjct: 325 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
+YG + ++HY C+VD+L RAGR+ EA+E I+ MP K TA G+LLGACR + +
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIG 444
Query: 255 EIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYSES 314
E GR E+EPENA NYV+L+ +YAS G V G SW+ + ++
Sbjct: 445 ESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQT 504
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C++ AL + +H + I+ P L + L+ YG+C CL ++ V +M + K+VV
Sbjct: 62 CLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE--KNVV 119
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA---GFADDALCYF 190
+W+++IS Y+ G + AL F EM + KP+ TF VL +C A G
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
+ D + S L+D+ ++AG++ EA E+ +P + + G + +
Sbjct: 180 VKWNYDSHIFVGSS----LLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG----YAQ 231
Query: 251 LGLAEIAGRASAEVEPEN-AANYVLLAKMYASV 282
LGL E A + E + NYV A + ++
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
+Q S +A+ ++ +M C+ + L L K+IHG ++ + D H
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+GS L++ Y + G + + +F + + +DVV+ +++I+ YA G + ALE F +
Sbjct: 189 FVGSSLLDMYAKAGQIKEAREIFECLPE--RDVVSCTAIIAGYAQLGLDEEALEMFHRLH 246
Query: 160 MAGVKPDGITFLGVLKACSHAGFAD---DALCYFTRMQRD-YGVEASSDHYSCLVDVLSR 215
G+ P+ +T+ +L A S D A C+ R + Y V +S L+D+ S+
Sbjct: 247 SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS-----LIDMYSK 301
Query: 216 AGRLHEAYEVIRGMPVKVTAKAWGALL 242
G L A + MP + TA +W A+L
Sbjct: 302 CGNLSYARRLFDNMPER-TAISWNAML 327
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 152/297 (51%), Gaps = 8/297 (2%)
Query: 16 LELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV 75
LE H + ++N II+ + + S A L+ +M C
Sbjct: 556 LEKMHNKRLQEMCVSWNSIISGYVMK-EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA 614
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N+A+ L K+IH I+ ++ + S L++ Y +CG L +S +F K + +D V W
Sbjct: 615 NLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK--SLRRDFVTW 672
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+++I YA HG+ + A++ F+ M + +KP+ +TF+ +L+AC+H G D L YF M+R
Sbjct: 673 NAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 732
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC---RNFGELG 252
DYG++ HYS +VD+L ++G++ A E+IR MP + W LLG C RN E
Sbjct: 733 DYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVE-- 790
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+AE A A ++P++++ Y LL+ +YA G +K G SWV
Sbjct: 791 VAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 2 ISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXX 61
+ +YA DN+ A LF + N ++N +I + + G FKA+ L+ ++
Sbjct: 323 LDMYAKC-DNMQDAQILFDNSE-NLNRQSYNAMITGYSQEEHG-FKALLLFHRLMSSGLG 379
Query: 62 XXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNV 121
C V L+ +I+G I++ + + + I+ YG+C L + V
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 439
Query: 122 FSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
F +MR +D V+W+++I+A+ +G+ L F M + ++PD TF +LKAC+
Sbjct: 440 FDEMRR--RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS 497
Query: 182 FADDALCYFTRMQRDYGVE----------ASSDHYSC-LVDVLSRAGRLHEAYEV 225
YG+E AS+ C L+D+ S+ G + EA ++
Sbjct: 498 LG-------------YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 43/216 (19%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM-------- 125
C AL L K+ H + I + P + + L++ Y V++ VF KM
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 126 ----------RDMDK-----------DVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
DM K DVV+W+S++S Y +GE+ ++E F +M G++
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 165 PDGITFLGVLKACSHAGFADDALC------YFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
DG TF +LK CS F +D R+ D V A+ S L+D+ ++ R
Sbjct: 178 FDGRTFAIILKVCS---FLEDTSLGMQIHGIVVRVGCDTDVVAA----SALLDMYAKGKR 230
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
E+ V +G+P K + +W A++ C L LA
Sbjct: 231 FVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLSLA 265
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N IIAA QN ++ + L+ M C +L EIH
Sbjct: 450 SWNAIIAA-HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSS 507
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCL----------VNSCNVFSKMRDMDKD-------- 131
+++ + + +G LI+ Y +CG + NV M +++K
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEM 567
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V+W+S+IS Y + +++ A F M G+ PD T+ VL C++ A
Sbjct: 568 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 192 RMQRDYGVEASSDHYSC--LVDVLSRAGRLHEA 222
++ + E SD Y C LVD+ S+ G LH++
Sbjct: 628 QVIKK---ELQSDVYICSTLVDMYSKCGDLHDS 657
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 5/178 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI+ Y+ S D + A F++M V + ++N +++ QN S K+I ++ M
Sbjct: 120 MINGYSKSND-MFKANSFFNMMPVR-DVVSWNSMLSGYL-QNGESLKSIEVFVDMGREGI 176
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + +L +IHG +R D S L++ Y + V S
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
VF + + K+ V+WS++I+ + AL+ FKEM+ + VL++C+
Sbjct: 237 VFQGIPE--KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 107/251 (42%), Gaps = 9/251 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +YA +L +F +P S I A QN+ A+ +++M
Sbjct: 221 LLDMYAKGK-RFVESLRVFQ--GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++ L L ++H + +++D + + ++ Y +C + ++
Sbjct: 278 GVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI 337
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F ++++ +++++I+ Y+ AL F + +G+ D I+ GV +AC+
Sbjct: 338 LFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALV 395
Query: 181 -GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
G ++ Y ++ ++ + + +D+ + L EA+ V M + A +W
Sbjct: 396 KGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMR-RRDAVSWN 452
Query: 240 ALLGACRNFGE 250
A++ A G+
Sbjct: 453 AIIAAHEQNGK 463
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 113/181 (62%), Gaps = 2/181 (1%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ LI+ YG+CG + + ++F +MR ++VV+WSS+I YA +G ALE F++M G
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQ--RNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
V+P+ ITF+GVL AC H G ++ YF M+ ++ +E HY C+VD+LSR G+L EA
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 223 YEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASV 282
+V+ MP+K WG L+G C FG++ +AE E+EP N YV+LA +YA
Sbjct: 377 KKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALR 436
Query: 283 G 283
G
Sbjct: 437 G 437
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 9/225 (4%)
Query: 21 LMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAAL 80
++D P +N I+ + +++ AI +Y M V +
Sbjct: 75 ILDQYPIAFLWNNIMRSYI-RHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDF 133
Query: 81 NLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLIS 140
L KE+H +R SG I Y + G N+ VF + + ++ + +W+++I
Sbjct: 134 TLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDE--NPERKLGSWNAIIG 191
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY-FTRMQRDYGV 199
G A A+E F +M+ +G++PD T + V +C G D +L + +
Sbjct: 192 GLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC--GGLGDLSLAFQLHKCVLQAKT 249
Query: 200 EASSD--HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
E SD + L+D+ + GR+ A + M + +W +++
Sbjct: 250 EEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQR-NVVSWSSMI 293
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 123/226 (54%), Gaps = 2/226 (0%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H + D ++ + LI Y +CG + ++ F ++ K+ V+W+++I+AY+
Sbjct: 712 KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST--KNEVSWNAIINAYS 769
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
HG AL++F +M + V+P+ +T +GVL ACSH G D + YF M +YG+
Sbjct: 770 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+HY C+VD+L+RAG L A E I+ MP+K A W LL AC + + E A E
Sbjct: 830 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+EPE++A YVLL+ +YA GVK G SW+
Sbjct: 890 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 20/276 (7%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQND--GSFKAIALYRKMXXX 58
+++LYA D + TAL+ F +V N +N ++ A +D SF+ ++R+M
Sbjct: 430 LLNLYAKCAD-IETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFR---IFRQMQIE 484
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C+ + L L ++IH I+ + + + S LI+ Y + G L +
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
++ +R KDVV+W+++I+ Y + AL TF++M G++ D + + AC
Sbjct: 545 WDIL--IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC- 601
Query: 179 HAGFADDALCYFTRMQRDYGVEA-SSD--HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTA 235
AG AL ++ V SSD + LV + SR G++ E+Y
Sbjct: 602 -AGL--QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658
Query: 236 KAWGALLGACRNFGELGLAEIAGRASAEVEPENAAN 271
AW AL+ F + G E A R + E N
Sbjct: 659 -AWNALVSG---FQQSGNNEEALRVFVRMNREGIDN 690
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 43/294 (14%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
+ S++ +I+ L+ +N+ +AI L+ M C + +L + +++
Sbjct: 252 DHSSWVAMISGLS-KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
HG ++ + + L+ Y G L+++ ++FS M +D V +++LI+ + G
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ--RDAVTYNTLINGLSQCG 368
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACS-----------HA-----GFADD----- 185
+ A+E FK M + G++PD T ++ ACS HA GFA +
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 186 ------ALCYFTRMQRDYGVEASSDHYSC---------LVDVLSRAGRLHEAYEVIRGMP 230
A C DY +E ++ L+D L + R+ ++ +P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 231 VKVTAKAWGALLGACRNFGELGLAE-IAGRASAEVEPENAANYVLLAKMYASVG 283
+ T + ++L C G+L L E I + NA +L MYA +G
Sbjct: 489 NQYT---YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 85/226 (37%), Gaps = 6/226 (2%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
KA+ +R+M C + AL ++IH + + L+
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y RCG + S F + D +AW++L+S + G + AL F M G+ +
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDN--IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNN 691
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
TF +KA S + + G ++ ++ + L+ + ++ G + +A +
Sbjct: 692 NFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 227 RGMPVKVTAKAWGALLGACRN--FGELGLAEIAGRASAEVEPENAA 270
+ K +W A++ A FG L + V P +
Sbjct: 751 LEVSTK-NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 140/260 (53%), Gaps = 7/260 (2%)
Query: 26 PNESTFNPIIAALA--AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLI 83
P+ +T+N ++AA A + D + + L+ +M C N+
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKS---CANLGEFVRG 235
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
H Y ++N++ + +G+ LI+ Y +CGCL + VF +M +DV ++++I A
Sbjct: 236 VWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ--RDVSCYNAMIRGLA 293
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+HG + +E +K + G+ PD TF+ + ACSH+G D+ L F M+ YG+E
Sbjct: 294 VHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKV 353
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+HY CLVD+L R+GRL EA E I+ MPVK A W + LG+ + G+ EIA +
Sbjct: 354 EHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLG 413
Query: 264 VEPENAANYVLLAKMYASVG 283
+E EN+ NYVLL+ +YA V
Sbjct: 414 LEFENSGNYVLLSNIYAGVN 433
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 138/262 (52%), Gaps = 3/262 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A+ +R+M C N+ AL+ +H Y + D + ++ + LI
Sbjct: 189 EALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLI 248
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y RCGC+ + VF M + VV+W+S+I +A +G A +L F++M+ G KPD
Sbjct: 249 DLYCRCGCVEFARQVFYNMEK--RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPD 306
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
+TF G L ACSH G ++ L YF M+ DY + +HY CLVD+ SRAGRL +A +++
Sbjct: 307 AVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLV 366
Query: 227 RGMPVKVTAKAWGALLGACRNFG-ELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXX 285
+ MP+K G+LL AC N G + LAE + ++ ++ +NYV+L+ MYA+ G
Sbjct: 367 QSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKW 426
Query: 286 XXXXXXXXXXXXXGVKSTTGSS 307
G+K G S
Sbjct: 427 EGASKMRRKMKGLGLKKQPGFS 448
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Query: 96 DPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETF 155
D + + +I+ Y R G + N+ +F KM + +D+++W+++I+ + G + AL F
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPE--RDLISWTAMINGFVKKGYQEEALLWF 194
Query: 156 KEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSR 215
+EM+++GVKPD + + L AC++ G L + R + + + L+D+ R
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGL-WVHRYVLSQDFKNNVRVSNSLIDLYCR 253
Query: 216 AGRLHEAYEVIRGMPVKVTAKAWGALL 242
G + A +V M K T +W +++
Sbjct: 254 CGCVEFARQVFYNME-KRTVVSWNSVI 279
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 146/287 (50%), Gaps = 3/287 (1%)
Query: 24 VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLI 83
+ P+ +N +I+ + + S +A+ +R+M C N+++ +
Sbjct: 305 LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQC 364
Query: 84 KEIHGYGIRNDIDPHP-QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
K+IHG I++ I + + + LI Y + G L ++ VF +M +++ V+++ +I Y
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELN--AVSFNCMIKGY 422
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
A HG AL ++ M +G+ P+ ITF+ VL AC+H G D+ YF M+ + +E
Sbjct: 423 AQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE 482
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
++HYSC++D+L RAG+L EA I MP K + AW ALLGACR + LAE A
Sbjct: 483 AEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELM 542
Query: 263 EVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++P A YV+LA MYA ++ G SW+
Sbjct: 543 VMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 95/172 (55%), Gaps = 7/172 (4%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L A+ +F+ MD +E ++N +I A +G+ KA+ALY++M
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGA-KALALYKEMIFKGFKIDMFTLASVL 247
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCG-C--LVNSCNVFSKMRDM 128
++ L ++ HG I+ + +GSGLI+ Y +CG C + +S VF ++ +
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI--L 305
Query: 129 DKDVVAWSSLISAYALHGE-AKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
D+V W+++IS Y+++ E ++ A+++F++M+ G +PD +F+ V ACS+
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 6 AHSPDN-LPTALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXX 63
A++ D+ + A +LF ++P P+ ++N +I+ A + +F A+ L+++M
Sbjct: 83 AYAKDSKIHIARQLFD--EIPQPDTVSYNTLISGYADARE-TFAAMVLFKRMRKLGFEVD 139
Query: 64 XXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFS 123
C + ++LIK++H + + D + + + + Y + G L + +VF
Sbjct: 140 GFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 124 KMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
M ++ +D V+W+S+I AY H E AL +KEM G K D T VL A +
Sbjct: 198 GMDEL-RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 151/314 (48%), Gaps = 7/314 (2%)
Query: 1 MISLYAHSPDNLP-TALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
+I LY S LP AL++F M N +N +I+ + N +I L+ M
Sbjct: 517 LIDLY--SKCGLPEMALKVFTSMSTE-NMVAWNSMISCYSRNNLPEL-SIDLFNLMLSQG 572
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
+ A+L K +HGY +R I L + LI+ Y +CG +
Sbjct: 573 IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAE 632
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
N+F KM+ K ++ W+ +I Y HG+ AL F EM+ AG PD +TFL ++ AC+H
Sbjct: 633 NIFKKMQH--KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNH 690
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
+GF ++ F M++DYG+E + +HY+ +VD+L RAG L EAY I+ MP++ + W
Sbjct: 691 SGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWL 750
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
LL A R + L ++ +EPE + YV L +Y G G
Sbjct: 751 CLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKG 810
Query: 300 VKSTTGSSWVVYSE 313
+ G SW+ S+
Sbjct: 811 LHKQPGCSWIEVSD 824
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 9/244 (3%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
+N ++AA A +ND + A+ L+ M C + N K +H
Sbjct: 341 WNAMVAAYA-ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL 399
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
+ I + S L+ Y +CGC ++ VF M + KD+VAW SLIS +G+ K
Sbjct: 400 FKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE--KDMVAWGSLISGLCKNGKFKE 457
Query: 151 ALETFKEM--EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
AL+ F +M + +KPD V AC+ L M + G+ + S
Sbjct: 458 ALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSS 516
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG--ACRNFGELGLAEIAGRASAEVEP 266
L+D+ S+ G A +V M + AW +++ + N EL + S + P
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFP 575
Query: 267 ENAA 270
++ +
Sbjct: 576 DSVS 579
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
++IH ++ + P + + L+ Y +CG + + VFS + +DK + W+++++AYA
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV--VDKRLEIWNAMVAAYA 349
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+ +AL+ F M V PD T V+ CS G + + + ++++S
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTS 408
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACRN 247
S L+ + S+ G +AY V + M K AWG+L+ G C+N
Sbjct: 409 TIESALLTLYSKCGCDPDAYLVFKSMEEKDMV-AWGSLISGLCKN 452
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K+IHG+ +RN +D L + LI+ Y + G +++ VF ++ D +VV W+ +I +
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIED-KSNVVLWNVMIVGFG 248
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH---AGFADDALCYFTRMQRDYGVE 200
G +++L+ + + VK +F G L ACS +GF C +M G+
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM----GLH 304
Query: 201 ASSDHYSC--LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+D Y C L+ + S+ G + EA E + V + W A++ A
Sbjct: 305 --NDPYVCTSLLSMYSKCGMVGEA-ETVFSCVVDKRLEIWNAMVAA 347
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + AL ++HG I+ + + +GS LI+ Y +CG + VF+ M +++V
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST--ENMV 543
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
AW+S+IS Y+ + + +++ F M G+ PD ++ VL A S
Sbjct: 544 AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 9/188 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD---- 129
C + L+ K IHG + P + + L+ Y +CG L + VF
Sbjct: 70 CSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVS 129
Query: 130 -KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA-CSHAGFADDAL 187
+DV W+S+I Y K + F+ M + GV+PD + V+ C F +
Sbjct: 130 ARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEG 189
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
++ S + L+D+ + G +A+ V + K W ++
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI---VG 246
Query: 248 FGELGLAE 255
FG G+ E
Sbjct: 247 FGGSGICE 254
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 141/281 (50%), Gaps = 3/281 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
+E + I+ LA QN +AI + +M +L L K++
Sbjct: 321 DEVSMTVILVGLA-QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQL 379
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H I+ + + +GLI Y +CG L +S VF +M ++ V+W+S+I+A+A HG
Sbjct: 380 HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPK--RNYVSWNSMIAAFARHG 437
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
AAL+ ++EM VKP +TFL +L ACSH G D M+ +G+E ++HY
Sbjct: 438 HGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY 497
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEP 266
+C++D+L RAG L EA I +P+K K W ALLGAC G+ + E A + P
Sbjct: 498 TCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAP 557
Query: 267 ENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
++++ ++L+A +Y+S G GV TG S
Sbjct: 558 DSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGIS 598
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K IH I + D +G+ LI +Y +CGC V+ VF M ++V+ +++IS
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMS--HRNVITLTAVISGLI 232
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+ + L F M V P+ +T+L L ACS + + + + YG+E+
Sbjct: 233 ENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK-YGIESEL 291
Query: 204 DHYSCLVDVLSRAGRLHEAYEV 225
S L+D+ S+ G + +A+ +
Sbjct: 292 CIESALMDMYSKCGSIEDAWTI 313
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 139/253 (54%), Gaps = 5/253 (1%)
Query: 34 IIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRN 93
+I + QN+ + A +++ M C +A++ + ++IHG+ +++
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 94 -DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAAL 152
I LG+ LI+ Y + G + ++ F +M++ KDV +W+SLI+ Y HG + A+
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKE--KDVRSWTSLIAGYGRHGNFEKAI 403
Query: 153 ETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDV 212
+ + ME +KP+ +TFL +L ACSH G + + M +G+EA +H SC++D+
Sbjct: 404 DLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDM 463
Query: 213 LSRAGRLHEAYEVIRGMP--VKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAA 270
L+R+G L EAY +IR V +++ WGA L ACR G + L+++A +EP
Sbjct: 464 LARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPV 523
Query: 271 NYVLLAKMYASVG 283
NY+ LA +YA+ G
Sbjct: 524 NYINLASVYAANG 536
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IHG I N + QL LI+ Y + G + ++ +F ++ +DVV+W+++IS ++
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISK--RDVVSWTAMISRFSRC 91
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G AL FKEM VK + T+ VLK+C G C MQ VE +
Sbjct: 92 GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLG------CLKEGMQIHGSVEKGNCA 145
Query: 206 -----YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
S L+ + +R G++ EA M + +W A++
Sbjct: 146 GNLIVRSALLSLYARCGKMEEARLQFDSMKERDLV-SWNAMI 186
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 48 AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIE 107
A+ L+++M C ++ L +IHG + + + + S L+
Sbjct: 97 ALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLS 156
Query: 108 AYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 167
Y RCG + + F M++ +D+V+W+++I Y + A + F+ M G KPD
Sbjct: 157 LYARCGKMEEARLQFDSMKE--RDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDC 214
Query: 168 ITFLGVLKA 176
TF +L+A
Sbjct: 215 FTFGSLLRA 223
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
V L ++ E+HG I+ L L+ AY +CG L N+ + + +D+++ +
Sbjct: 227 VKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTK--KRDLLSCT 284
Query: 137 SLISAYALHGEAKA-ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+LI+ ++ + A + FK+M K D + +LK C+ A R
Sbjct: 285 ALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTI-----ASVTIGRQIH 339
Query: 196 DYGVEASSDHY-----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
+ +++S + + L+D+ +++G + +A M K ++W +L+ G
Sbjct: 340 GFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEK-DVRSWTSLIAGYGRHGN 398
Query: 251 LGLA-EIAGRASAE-VEPENAANYVLLA 276
A ++ R E ++P + LL+
Sbjct: 399 FEKAIDLYNRMEHERIKPNDVTFLSLLS 426
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 131/239 (54%), Gaps = 5/239 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
CV+ ++L L + H Y +R+ +G+ LI Y +CG + NS VF++M + KDVV
Sbjct: 499 CVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSE--KDVV 556
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADDALCYFTR 192
+W+SLISAY+ HGE + A+ T+K M+ G V PD TF VL ACSHAG ++ L F
Sbjct: 557 SWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNS 616
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK--AWGALLGACRNFGE 250
M +GV + DH+SCLVD+L RAG L EA +++ + ++ W AL AC G+
Sbjct: 617 MVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGD 676
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
L L ++ + E E ++ + YV L+ +YA G G G SW+
Sbjct: 677 LKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 18 LFHLMDVP-PNESTFNPIIAALAA-QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV 75
+F DV ++ TFN +I LA + D +++ ++RKM C
Sbjct: 246 VFEETDVAVRDQVTFNVVIDGLAGFKRD---ESLLVFRKMLEASLRPTDLTFVSVMGSC- 301
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
+ AA+ ++HG I+ + + + + + Y + VF + + KD+V W
Sbjct: 302 SCAAMG--HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEE--KDLVTW 357
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+++IS+Y K+A+ +K M + GVKPD TF G L A S D L
Sbjct: 358 NTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF-GSLLATS---LDLDVLEMVQACII 413
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+G+ + + + L+ S+ G++ +A +++ ++ +W A++
Sbjct: 414 KFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAII 459
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 159/311 (51%), Gaps = 7/311 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVP-PNESTFNPIIAALAAQNDGSFK-AIALYRKMXXX 58
M+ Y+ + D + A +F M +P N T+ IIA A + G K A L +M
Sbjct: 253 MVMGYSKAGD-MEMARVMFDKMPLPAKNVVTWTIIIAGYAEK--GLLKEADRLVDQMVAS 309
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C L+L IH R+++ + + + L++ Y +CG L +
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+VF+ + KD+V+W++++ +HG K A+E F M G++PD +TF+ VL +C+
Sbjct: 370 FDVFNDIPK--KDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 427
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW 238
HAG D+ + YF M++ Y + +HY CLVD+L R GRL EA +V++ MP++ W
Sbjct: 428 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 487
Query: 239 GALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXX 298
GALLGACR E+ +A+ +++P + NY LL+ +YA+
Sbjct: 488 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSM 547
Query: 299 GVKSTTGSSWV 309
GV+ +G+S V
Sbjct: 548 GVEKPSGASSV 558
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
A LN +K++H IR ++ + LI A C + VF+++++ +V +S
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQE--PNVHLCNS 87
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
LI A+A + + A F EM+ G+ D T+ +LKACS + +++
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK-- 145
Query: 198 GVEASSDHY--SCLVDVLSRAGRL--HEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
+ SSD Y + L+D SR G L +A ++ M + T +W ++LG GEL
Sbjct: 146 -LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTV-SWNSMLGGLVKAGEL 201
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
S ++ Y + G + + +F KM K+VV W+ +I+ YA G K A +M +G
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
+K D + +L AC+ +G + + ++R + +++ + L+D+ ++ G L +A
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRS-NLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 223 YEVIRGMPVKVTAKAWGALL 242
++V +P K +W +L
Sbjct: 370 FDVFNDIPKKDLV-SWNTML 388
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 26/241 (10%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN N +I A AQN ++A ++ +M C + L ++K
Sbjct: 80 PNVHLCNSLIRA-HAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKM 138
Query: 86 IHGY----GIRNDIDPHPQLGSGLIEAYGRCGCL--VNSCNVFSKMRDMDKDVVAWSSLI 139
+H + G+ +DI + + LI+ Y RCG L ++ +F KM ++D V+W+S++
Sbjct: 139 MHNHIEKLGLSSDI----YVPNALIDCYSRCGGLGVRDAMKLFEKMS--ERDTVSWNSML 192
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
GE + A F EM + D I++ +L + A F +M
Sbjct: 193 GGLVKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEKMP----- 243
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKV-TAKAWGALLGACRNFGELGLAEIAG 258
E ++ +S +V S+AG + A + MP+ W ++ + E GL + A
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG---YAEKGLLKEAD 300
Query: 259 R 259
R
Sbjct: 301 R 301
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 148/310 (47%), Gaps = 6/310 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++Y+ D L AL +F + + T+N II+ A N S +A L R+M
Sbjct: 321 LITMYSKCKD-LRHALIVFRQTE-ENSLCTWNSIISGYAQLNK-SEEASHLLREMLVAGF 377
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSC 119
C +A L KE H Y +R + L + L++ Y + G +V +
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
V M +D V ++SLI Y GE AL FKEM +G+KPD +T + VL ACSH
Sbjct: 438 QVSDLMSK--RDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSH 495
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
+ + F +MQ +YG+ H+SC+VD+ RAG L +A ++I MP K + W
Sbjct: 496 SKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWA 555
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
LL AC G + + A E++PEN YVL+A MYA+ G G
Sbjct: 556 TLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLG 615
Query: 300 VKSTTGSSWV 309
VK G +W+
Sbjct: 616 VKKDPGCAWI 625
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 17/248 (6%)
Query: 15 ALELFHLM---DVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
A ELF M V + T+N II+ Q A+ L +M
Sbjct: 229 AFELFDKMWFSGVEVSVITWN-IISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + A+ L KEIHG I + D + + LI Y +C L ++ VF + +
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE--ENS 345
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALC 188
+ W+S+IS YA +++ A +EM +AG +P+ IT +L C+ + C
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 189 YFTRMQ--RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACR 246
Y R + +DY + +S LVDV +++G++ A +V M K + +L+
Sbjct: 406 YILRRKCFKDYTMLWNS-----LVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYG 459
Query: 247 NFGELGLA 254
N GE G+A
Sbjct: 460 NQGEGGVA 467
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 157/310 (50%), Gaps = 10/310 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
+I++Y+ + AL++FH ++P N ++ IIA L N+ F+A+ R+M
Sbjct: 439 LINMYSKCK-CIDKALDIFH--NIPRKNVISWTSIIAGLRL-NNRCFEALIFLRQMKMTL 494
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
+ AL KEIH + +R + L + L++ Y RCG + +
Sbjct: 495 QPNAITLTAALAAC-ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAW 553
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
+ F+ + KDV +W+ L++ Y+ G+ +E F M + V+PD ITF+ +L CS
Sbjct: 554 SQFNSQK---KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
+ L YF++M+ DYGV + HY+C+VD+L RAG L EA++ I+ MPV WG
Sbjct: 611 SQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
ALL ACR ++ L E++ + E++ ++ Y+LL +YA G G
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729
Query: 300 VKSTTGSSWV 309
+ G SWV
Sbjct: 730 LTVDAGCSWV 739
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
++IH Y I + + L + Y G + +FS+M KD+V+W+++IS Y
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER--KDIVSWTTMISGYE 374
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+ A++T++ M+ VKPD IT VL AC+ G D + ++A
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV-----ELHKLAIKARL 429
Query: 204 DHY----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACR 246
Y + L+++ S+ + +A ++ +P K +W +++ R
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLR 475
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L KE+H + +R + + + LI Y +CG + ++ +F +M +D++
Sbjct: 206 CGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPR--RDII 263
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
+W+++IS Y +G LE F M V PD +T V+ AC G
Sbjct: 264 SWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM- 158
+LG+ + + R G LV++ VF KM + +++ +W+ L+ YA G A+ + M
Sbjct: 130 ELGNAFLAMFVRFGNLVDAWYVFGKMSE--RNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 159 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ-RDYGVEASSDHYSCLVDVLSRAG 217
+ GVKPD TF VL+ C G D A + YG E D + L+ + + G
Sbjct: 188 WVGGVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 218 RLHEAYEVIRGMPVKVTAKAWGALL------GACRNFGELGLA 254
+ A + MP + +W A++ G C EL A
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLELFFA 287
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 134/263 (50%), Gaps = 5/263 (1%)
Query: 21 LMDVPPNES--TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVA 78
L D P +S ++N +I+ QN + AI+L+R+M C +
Sbjct: 376 LFDESPEKSLPSWNAMISGYT-QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
AL+L K +H D + + + LI Y +CG + + +F M K+ V W+++
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM--TKKNEVTWNTM 492
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
IS Y LHG+ + AL F EM +G+ P +TFL VL ACSHAG + F M YG
Sbjct: 493 ISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAG 258
E S HY+C+VD+L RAG L A + I M ++ + W LLGACR + LA
Sbjct: 553 FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVS 612
Query: 259 RASAEVEPENAANYVLLAKMYAS 281
E++P+N +VLL+ ++++
Sbjct: 613 EKLFELDPDNVGYHVLLSNIHSA 635
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L L +IH + H + +G I Y +CG + +F + R D+VA++++I
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK--PDIVAYNAMI 294
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG--FADDALCYFTRMQRDY 197
Y +GE + +L FKE+ ++G + T + ++ H +A C ++ ++
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYC----LKSNF 350
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
AS + L V S+ + A ++ P K + +W A++ + + GL E A
Sbjct: 351 LSHASVS--TALTTVYSKLNEIESARKLFDESPEK-SLPSWNAMISG---YTQNGLTEDA 404
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 160/309 (51%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
I+ Y + D L ++ +LF + + N ++N +I + QN + K +A +
Sbjct: 175 FINWYGKTGD-LTSSCKLFEDLSIK-NLVSWNTMIV-IHLQNGLAEKGLAYFNMSRRVGH 231
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++ + L + IHG + + + + L++ Y + G L +S
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSST 291
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF ++ D +AW+++++AYA HG + A++ F+ M G+ PD +TF +L ACSH+
Sbjct: 292 VFHEI--TSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G ++ YF M + Y ++ DHYSC+VD+L R+G L +AY +I+ MP++ ++ WGA
Sbjct: 350 GLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGA 409
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LLGACR + + L A E+EP + NYV+L+ +Y++ G G+
Sbjct: 410 LLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGL 469
Query: 301 KSTTGSSWV 309
+G S++
Sbjct: 470 VRASGCSYI 478
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
++ L + +H +++ H +G L+ Y R G V + +F +M + +D+V+W+S
Sbjct: 45 VSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE--RDLVSWNS 102
Query: 138 LISAYALHGEAKAALETFKEMEMA--GVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
LIS Y+ G E M ++ G +P+ +TFL ++ AC + G ++ C + +
Sbjct: 103 LISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK 162
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG--ELGL 253
+GV + ++ + G L + ++ + +K +W ++ G E GL
Sbjct: 163 -FGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMIVIHLQNGLAEKGL 220
Query: 254 AEIAGRASAEVEPENAANYVLL 275
A EP+ A +L
Sbjct: 221 AYFNMSRRVGHEPDQATFLAVL 242
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 130/237 (54%), Gaps = 2/237 (0%)
Query: 76 NVAALNLIKEIHGY-GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
N+ L + +H Y G R + ++ + LI+AY +CGC+ ++ F ++ + K++V+
Sbjct: 268 NLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVS 327
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA-LCYFTRM 193
W+++ISA+A+HG K A+ FK+ME G+KP+ +T + VL ACSH G A++ L +F M
Sbjct: 328 WTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+Y + HY CLVD+L R GRL EA ++ +P++ A W LLGAC + + L
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAEL 447
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
AE R E+E + +YVL++ ++ G GV G S V
Sbjct: 448 AERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQVT 504
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 145/283 (51%), Gaps = 4/283 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N+ ++N +IA A+ G+ KA+ L++ M C + L K +
Sbjct: 226 NDVSWNALIAG-HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H Y I++ G+ L++ Y + G + ++ +F ++ +DVV+W+SL++AYA HG
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL--AKRDVVSWNSLLTAYAQHG 342
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
K A+ F+EM G++P+ I+FL VL ACSH+G D+ Y+ M++D G+ + HY
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHY 401
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEP 266
+VD+L RAG L+ A I MP++ TA W ALL ACR L A E++P
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDP 461
Query: 267 ENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++ +V+L +YAS G GVK SWV
Sbjct: 462 DDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++HG+ ++ D + +GS L++ Y R G + ++ VF + ++ V+W++LI+ +A
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE--SRNDVSWNALIAGHAR 239
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
+ ALE F+ M G +P ++ + ACS GF + M + G + +
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAF 298
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+ L+D+ +++G +H+A ++ + K +W +LL A G
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHG 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 25/168 (14%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
R+DI +G+ L+ Y +CG L + VF KM +D V W++LIS Y+ H
Sbjct: 91 FRHDI----VMGNTLLNMYAKCGSLEEARKVFEKM--PQRDFVTWTTLISGYSQHDRPCD 144
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKA--------CSHAGFADDALCYFTRMQRDYGVEAS 202
AL F +M G P+ T V+KA C H C F D V
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGF-----DSNVHVG 199
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACRNFG 249
S L+D+ +R G + +A V + + +W AL+ G R G
Sbjct: 200 ----SALLDLYTRYGLMDDAQLVFDALESRNDV-SWNALIAGHARRSG 242
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
NL A LF+ M V + ++ +I + QN +AIA++ KM
Sbjct: 981 NLEQAESLFNQMPVK-DIISWTTMIKGYS-QNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C ++ L + KE+H Y ++N +GS L++ Y +CG L + VF + K
Sbjct: 1039 ISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK--K 1096
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
++ W+S+I A HG A+ AL+ F +MEM VKP+ +TF+ V AC+HAG D+ +
Sbjct: 1097 NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY 1156
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M DY + ++ +HY +V + S+AG ++EA E+I M + A WGALL CR
Sbjct: 1157 RSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKN 1216
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYA 280
L +AEIA +EP N+ Y LL MYA
Sbjct: 1217 LVIAEIAFNKLMVLEPMNSGYYFLLVSMYA 1246
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 2/207 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ L+ K +H N ++ + + LI Y +CG L + +VF KM ++VV
Sbjct: 354 CANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR--RNVV 411
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WSS+I+A ++HGEA AL F M+ V+P+ +TF+GVL CSH+G ++ F M
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+Y + +HY C+VD+ RA L EA EVI MPV WG+L+ ACR GEL L
Sbjct: 472 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELEL 531
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYA 280
+ A + E+EP++ VL++ +YA
Sbjct: 532 GKFAAKRILELEPDHDGALVLMSNIYA 558
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ + ++ Y +CG L ++ +F + KD+V W+++ISAY + AL F+EM
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEK--KDLVCWTTMISAYVESDYPQEALRVFEEMCC 337
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
+G+KPD ++ V+ AC++ G D A + + + G+E+ + L+++ ++ G L
Sbjct: 338 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLD 396
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGEL--GLAEIAGRASAEVEPENAANYV 273
+V MP + +W +++ A GE L+ A VEP N +V
Sbjct: 397 ATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP-NEVTFV 449
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 6/219 (2%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
AL +F + PP FNP + L+ ++ I Y+++
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPR-ATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
V+AL E+HG + P + +G ++ Y CG + + NVF +M +DVV
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH--RDVVT 179
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG-FADDALCYFTRM 193
W+++I Y G A + F+EM+ + V PD + ++ AC G + Y +
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI 239
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
+ D V + + LV + + AG + A E R M V+
Sbjct: 240 END--VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 157/299 (52%), Gaps = 4/299 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+ +ELF +M N T+ +I+A + N +A+ + KM
Sbjct: 388 ISKCVELFGMMPEKDN-ITWTAMISAFVS-NGYYEEALCWFHKMLQKEVCPNSYTFSSVL 445
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
++A L +IHG ++ +I + + L+ Y +CG ++ +FS + + +
Sbjct: 446 SATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE--PN 503
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+V+++++IS Y+ +G K AL+ F +E +G +P+G+TFL +L AC H G+ D YF
Sbjct: 504 IVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFK 563
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ Y +E DHY+C+VD+L R+G L +A +I MP K + WG+LL A + +
Sbjct: 564 SMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRV 623
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
LAE+A + E+EP++A YV+L+++Y+ +G +K GSSW++
Sbjct: 624 DLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWII 682
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 29/136 (21%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
+IHG R ++ LG+ L+ Y + G + + VF M++ KD V+W+SLI+
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN--KDSVSWNSLITGLVQ 353
Query: 145 HGEAKAALETFKEM-------------------------EMAGVKP--DGITFLGVLKAC 177
+ A E F++M E+ G+ P D IT+ ++ A
Sbjct: 354 RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 178 SHAGFADDALCYFTRM 193
G+ ++ALC+F +M
Sbjct: 414 VSNGYYEEALCWFHKM 429
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 153/284 (53%), Gaps = 9/284 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
M+S YA S ALELF ++ V N ++ +I+ G +A +++ +M
Sbjct: 177 MVSGYAKSGRK-EEALELFRILPVK-NLYSWTALISGFVQSGKG-LEAFSVFTEMRRERV 233
Query: 61 XXXXXXXXXXXX-XCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C N+AA +++HG I D + + LI+ Y +C ++ +
Sbjct: 234 DILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAK 293
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
++FS+MR +DVV+W+SLI A HG+A+ AL + +M GVKP+ +TF+G++ ACSH
Sbjct: 294 DIFSRMRH--RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSH 351
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
GF + F M +DYG+ S HY+CL+D+L R+G L EA +I MP W
Sbjct: 352 VGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWA 411
Query: 240 ALLGACRN--FGELGLAEIAGRASAEVEPENAANYVLLAKMYAS 281
ALL AC+ G++G+ IA + + ++ + Y+LL+ +YAS
Sbjct: 412 ALLSACKRQGRGQMGI-RIADHLVSSFKLKDPSTYILLSNIYAS 454
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ +++ +++H + I ++ + S L++ Y +CG L ++ VF +R K+ +
Sbjct: 115 CANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRV--KNTI 172
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W++++S YA G + ALE F+ + + + ++ ++ +G +A FT M
Sbjct: 173 SWTAMVSGYAKSGRKEEALELFRILPVKNL----YSWTALISGFVQSGKGLEAFSVFTEM 228
Query: 194 QRD 196
+R+
Sbjct: 229 RRE 231
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 15/175 (8%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C L K +H + ++ I L + L+ YG+CG ++ VF +M +D +
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP--HRDHI 70
Query: 134 AWSSLISAY-ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD---DALCY 189
AW+S+++A + K +G++PD F ++KAC++ G D C+
Sbjct: 71 AWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCH 130
Query: 190 F--TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
F + D V++S LVD+ ++ G L+ A V + VK T +W A++
Sbjct: 131 FIVSEYANDEVVKSS------LVDMYAKCGLLNSAKAVFDSIRVKNTI-SWTAMV 178
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 128/233 (54%), Gaps = 2/233 (0%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+ AL ++IH ++ + P +G+ L++ Y +CG + ++ +F ++ M+ + AW+
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMN--ITAWN 688
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
+++ A HGE K L+ FK+M+ G+KPD +TF+GVL ACSH+G +A + M D
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEI 256
YG++ +HYSCL D L RAG + +A +I M ++ +A + LL ACR G+ +
Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKR 808
Query: 257 AGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E+EP +++ YVLL+ MYA+ VK G SW+
Sbjct: 809 VATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 23/229 (10%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
+N ++A +DG K + L+ M C + A+N K++H Y
Sbjct: 485 WNAMMAGYTQSHDGH-KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
I++ D + SG+++ Y +CG + + F + D VAW+++IS +GE +
Sbjct: 544 IKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD--VAWTTMISGCIENGEEER 601
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC-- 208
A F +M + GV PD T + KA S C T +++ + A++ +C
Sbjct: 602 AFHVFSQMRLMGVLPDEFTIATLAKASS---------C-LTALEQGRQIHANALKLNCTN 651
Query: 209 -------LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
LVD+ ++ G + +AY + + + + + AW A+L GE
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE 699
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 16/190 (8%)
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+ + L L K H + + +P L + LI Y +CG L + VF KM D+D+V+
Sbjct: 50 ITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP--DRDLVS 107
Query: 135 WSSLISAYALHGEA-----KAALETFKEMEMAGVKPDGITFLGVLKACSHAGF--ADDAL 187
W+S+++AYA E + A F+ + V +T +LK C H+G+ A ++
Sbjct: 108 WNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES- 166
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
F G++ LV++ + G++ E + MP + W +L A
Sbjct: 167 --FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV-LWNLMLKA--- 220
Query: 248 FGELGLAEIA 257
+ E+G E A
Sbjct: 221 YLEMGFKEEA 230
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 19/228 (8%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNV-AALNLIKEIHG 88
++N +IA +A QN +A+ L+ ++ ++ L+L K++H
Sbjct: 383 SWNSVIAGIA-QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHV 441
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+ I+ + + + LI+AY R C+ + +F + + D+VAW+++++ Y +
Sbjct: 442 HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH---NFDLVAWNAMMAGYTQSHDG 498
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGF------ADDALCYFTRMQRDYGVEAS 202
L+ F M G + D T V K C GF Y + D + S
Sbjct: 499 HKTLKLFALMHKQGERSDDFTLATVFKTC---GFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
S ++D+ + G + A +PV AW ++ C GE
Sbjct: 556 SG----ILDMYVKCGDMSAAQFAFDSIPVPDDV-AWTTMISGCIENGE 598
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 143/271 (52%), Gaps = 2/271 (0%)
Query: 39 AAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPH 98
+A N +A+ L+R+M +++ALN +EIH Y +R
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE 621
Query: 99 PQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM 158
+ +++ Y CG L ++ VF ++ K ++ ++S+I+AY +HG KAA+E F +M
Sbjct: 622 GSIAVAVVDMYACCGDLQSAKAVFDRIER--KGLLQYTSMINAYGMHGCGKAAVELFDKM 679
Query: 159 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
V PD I+FL +L ACSHAG D+ + M+ +Y +E +HY CLVD+L RA
Sbjct: 680 RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANC 739
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKM 278
+ EA+E ++ M + TA+ W ALL ACR+ E + EIA + E+EP+N N VL++ +
Sbjct: 740 VVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNV 799
Query: 279 YASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+A G G++ G SW+
Sbjct: 800 FAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 830
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++ +IA A QND +A+ L+R + + ++ ++KEIH +
Sbjct: 454 SWTTVIAGYA-QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
+R + + + L++ YG+C + + VF ++ KDVV+W+S+IS+ AL+G
Sbjct: 513 ILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKG--KDVVSWTSMISSSALNGNES 569
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD---DALCYFTRMQRDYGVEAS---- 202
A+E F+ M G+ D + L +L A + + + CY R + + +E S
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR--KGFCLEGSIAVA 627
Query: 203 -SDHYSCLVDVLS 214
D Y+C D+ S
Sbjct: 628 VVDMYACCGDLQS 640
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 5/177 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++S+YA + D+L A LF + +N I+++ + S + + L+R+M
Sbjct: 223 LVSMYAKN-DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK-SLETLELFREMHMTGP 280
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP-QLGSGLIEAYGRCGCLVNSC 119
C + L KEIH +++ + + LI Y RCG + +
Sbjct: 281 APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAE 340
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
+ +M + DVV W+SLI Y + K ALE F +M AG K D ++ ++ A
Sbjct: 341 RILRQMNN--ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 21 LMDVPPNESTF--NPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVA 78
+ D P+ + F N +I A + + + A+ALY M C +
Sbjct: 138 VFDEMPDRTAFAWNTMIGAYVSNGEPA-SALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
+ E+H ++ + + L+ Y + L + +F ++ D V W+S+
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE-KGDAVLWNSI 255
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
+S+Y+ G++ LE F+EM M G P+ T + L AC GF+ L
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD--GFSYAKLGKEIHASVLKS 313
Query: 199 VEASSDHYSC--LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
SS+ Y C L+ + +R G++ +A ++R M W +L+
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
E+H Y I++ D + Q+G+ LI+ Y +C F +M DKD+++W+++I+ YA
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH--DKDLISWTTVIAGYAQ 464
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+ ALE F+++ ++ D + +L+A S
Sbjct: 465 NDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
L L+ YG+CG L ++ VF +M D+ AW+++I AY +GE +AL + M +
Sbjct: 118 LAGKLVFMYGKCGSLDDAEKVFDEMP--DRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175
Query: 161 AGVKPDGITFLGVLKACS 178
GV +F +LKAC+
Sbjct: 176 EGVPLGLSSFPALLKACA 193
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N L+ +H ++ H LG+ LI+ Y +CG L + VF ++ + KD+V
Sbjct: 363 CTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE--KDLV 420
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WSS+I+AY LHG ALE FK M G + D + FL +L AC+HAG ++A FT+
Sbjct: 421 SWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQA 480
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ Y + + +HY+C +++L R G++ +A+EV MP+K +A+ W +LL AC G L +
Sbjct: 481 GK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDV 539
Query: 254 A-EIAGRASAEVEPENAANYVLLAKMYASVG 283
A +I + EP+N ANYVLL+K++ G
Sbjct: 540 AGKIIANELMKSEPDNPANYVLLSKIHTESG 570
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 11/238 (4%)
Query: 10 DNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXX 69
D+ A +F M+V NE ++ +I+ A N + L+R M
Sbjct: 199 DDHAAAFHVFDQMEVK-NEVSWTAMISGCVA-NQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 70 XXXXCVNVA-ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVF--SKMR 126
CV + +L+KEIHG+ R+ +L + + Y RCG + S +F SK+R
Sbjct: 257 VLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR 316
Query: 127 DMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 186
D VV WSS+IS YA G+ + +M G++ + +T L ++ AC+++ A
Sbjct: 317 D----VVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFA 372
Query: 187 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+++ + G + + L+D+ ++ G L A EV + K +W +++ A
Sbjct: 373 STVHSQILK-CGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLV-SWSSMINA 428
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 126/234 (53%), Gaps = 1/234 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ ALN K +H Y + + L + LI+ Y +CG + ++ +VF + + D +
Sbjct: 251 CAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDAL 310
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+++I A HG + +L+ F +M + + PD ITFL +L ACSH G +A +F +
Sbjct: 311 MWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL 370
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
++ G E S+HY+C+VDVLSRAG + +A++ I MP+K T GALL C N G L L
Sbjct: 371 -KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLEL 429
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
AE G+ E++P N YV LA +YA GVK G S
Sbjct: 430 AETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHS 483
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 97 PHPQL--GSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
PH L + +++AY + G +V++ VF +M + +DVV WSS+I Y GE ALE
Sbjct: 170 PHKNLVTWNSILDAYAKSGDVVSARLVFDEMSE--RDVVTWSSMIDGYVKRGEYNKALEI 227
Query: 155 FKE-MEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVL 213
F + M M K + +T + V+ AC+H G + R D + + + L+D+
Sbjct: 228 FDQMMRMGSSKANEVTMVSVICACAHLGALNRGKT-VHRYILDVHLPLTVILQTSLIDMY 286
Query: 214 SRAGRLHEAYEVIRGMPVKVT-AKAWGALLG--ACRNFGELGLAEIAGRASAEVEPENAA 270
++ G + +A+ V VK T A W A++G A F L ++++P+
Sbjct: 287 AKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEIT 346
Query: 271 NYVLLA 276
LLA
Sbjct: 347 FLCLLA 352
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 123/237 (51%), Gaps = 3/237 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L K H Y I+ D +P +G+ L+E Y RCG L N+ VF+ + KD V
Sbjct: 376 CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI--ALKDTV 433
Query: 134 AWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
W+SLI+ Y +HG+ ALETF M + + VKP+ +TFL +L ACSHAG + L F
Sbjct: 434 VWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKL 493
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
M DY + + +HY+ LVD+L R G L A E+ + MP T + G LLGACR
Sbjct: 494 MVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGE 553
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+AE + E+E +A Y+L++ +Y G G+K S +
Sbjct: 554 MAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLI 610
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 35 IAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND 94
+ A QN + +A+ ++ M C L ++ H IR
Sbjct: 235 VIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG 294
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
++ ++ + L++ Y +C + VFS++ KDVV+W +LIS + L+G A ++E
Sbjct: 295 LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR--KDVVSWVALISGFTLNGMAHRSIEE 352
Query: 155 FKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVL 213
F M + +PD I + VL +CS GF + A C+ + + + YG +++ + LV++
Sbjct: 353 FSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASLVELY 411
Query: 214 SRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
SR G L A +V G+ +K T W +L+
Sbjct: 412 SRCGSLGNASKVFNGIALKDTV-VWTSLI 439
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 7/229 (3%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXX-XXXXXXXXXXX 73
AL +F ++ P+ T++ +++ +N ++A+ +R+M
Sbjct: 115 ALRMFDELE-KPDIVTWSSMVSGFE-KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSA 172
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L + +HG+ IR L + L+ Y + + N+F + +KDV+
Sbjct: 173 CTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI--AEKDVI 230
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS++I+ Y +G A AL F +M G +P+ T L VL+AC+ A +
Sbjct: 231 SWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELA 290
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
R G+E + LVD+ + EAY V +P K +W AL+
Sbjct: 291 IRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVV-SWVALI 337
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQL--GSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + +N + IHG+ ++ D+ L GS LI Y +CG ++ + +F ++ D
Sbjct: 70 CGELREVNYGEMIHGF-VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE--KPD 126
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACS 178
+V WSS++S + +G A+E F+ M MA V PD +T + ++ AC+
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 6/219 (2%)
Query: 96 DPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETF 155
DP L + L+ Y +CG + ++ +F+KM + KD V+W+S+I + HG A AL F
Sbjct: 500 DPDLILQNSLVSMYAKCGAIEDAYEIFAKM--VQKDTVSWNSMIMGLSHHGLADKALNLF 557
Query: 156 KEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSR 215
KEM +G KP+ +TFLGVL ACSH+G L F M+ Y ++ DHY ++D+L R
Sbjct: 558 KEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGR 617
Query: 216 AGRLHEAYEVIRGMPVKVTAKAWGALLGAC----RNFGELGLAEIAGRASAEVEPENAAN 271
AG+L EA E I +P +GALLG C R+ G+AE A E++P NA
Sbjct: 618 AGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPG 677
Query: 272 YVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
+V L +YA +G GVK T G SWVV
Sbjct: 678 HVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVV 716
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 129/236 (54%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N ALNL IHG+ +RN + + + + L++ Y +CGCL + ++F KM ++ +
Sbjct: 244 CANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEK--RNNL 301
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+S++IS ALHGE ++AL F +M G++PD + ++ VL ACSH+G + F M
Sbjct: 302 TYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEM 361
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
++ VE +++HY CLVD+L RAG L EA E I+ +P++ W L CR + L
Sbjct: 362 LKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIEL 421
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+IA + ++ N +Y+L++ +Y+ G+K T G S V
Sbjct: 422 GQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIV 477
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 10/231 (4%)
Query: 6 AHS--PDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXX 62
AHS +++ A +F +D P FN +I N SF+ A+ Y +M
Sbjct: 74 AHSGWENSMNYAASIFRGID-DPCTFDFNTMIRGYV--NVMSFEEALCFYNEMMQRGNEP 130
Query: 63 XXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVF 122
C + ++ K+IHG + ++ + + LI YGRCG + S VF
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 123 SKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAG 181
K+ K +WSS++SA A G L F+ M +K + + L AC++ G
Sbjct: 191 EKLE--SKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTG 248
Query: 182 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
+ + + R+ E + + LVD+ + G L +A + + M +
Sbjct: 249 ALNLGMSIHGFLLRNIS-ELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 139/264 (52%), Gaps = 3/264 (1%)
Query: 21 LMDVPPNESTFN-PIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAA 79
+ D P+ + F I+ A+N+ KAI L+ M C ++ A
Sbjct: 205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGA 264
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L + + Y +++ + + LG+ L++ + RCG + + +VF + + D ++WSS+I
Sbjct: 265 LEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS--LSWSSII 322
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
A+HG A A+ F +M G P +TF VL ACSH G + L + M++D+G+
Sbjct: 323 KGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGI 382
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGR 259
E +HY C+VD+L RAG+L EA I M VK A GALLGAC+ + +AE G
Sbjct: 383 EPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGN 442
Query: 260 ASAEVEPENAANYVLLAKMYASVG 283
+V+PE++ YVLL+ +YA G
Sbjct: 443 MLIKVKPEHSGYYVLLSNIYACAG 466
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 150/309 (48%), Gaps = 4/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+IS YA D + A +LF M N ++ +IA Q G+ +A+ L+RKM
Sbjct: 251 LISGYAKLGD-MEAAEKLFCEMP-EKNPVSWTALIAGYVRQGSGN-RALDLFRKMIALGV 307
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
++A+L KEIHGY IR ++ P+ + S LI+ Y + G L S
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF ++ D D V W+++ISA A HG AL +M V+P+ T + +L ACSH+
Sbjct: 368 VF-RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHS 426
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G ++ L +F M +G+ +HY+CL+D+L RAG E I MP + W A
Sbjct: 427 GLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNA 486
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
+LG CR G L + A +++PE++A Y+LL+ +YA G V
Sbjct: 487 ILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRV 546
Query: 301 KSTTGSSWV 309
SW+
Sbjct: 547 NKEKAVSWI 555
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 101/272 (37%), Gaps = 42/272 (15%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
AQ+ +A+ Y++ CV L L ++ HG + +
Sbjct: 155 AQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNV 214
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMR------------------DM-----------DK 130
L +I+AY +CG + ++ F +M DM +K
Sbjct: 215 VLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK 274
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA-----DD 185
+ V+W++LI+ Y G AL+ F++M GVKP+ TF L C+ A A +
Sbjct: 275 NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL--CASASIASLRHGKE 332
Query: 186 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
Y R V ++ S L+D+ S++G L + V R K W ++ A
Sbjct: 333 IHGYMIRT----NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISAL 388
Query: 246 --RNFGELGLAEIAGRASAEVEPENAANYVLL 275
G L + V+P V+L
Sbjct: 389 AQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 43/244 (17%)
Query: 74 CVNVAALNLIKEIHGY-GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDM-- 128
C + +L K IH + I P+ L + LI Y +CG +++C VF +M R++
Sbjct: 56 CGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYS 115
Query: 129 -------------------------DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGV 163
++DVV+W++++ YA G AL +KE +G+
Sbjct: 116 WNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGI 175
Query: 164 KPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA---SSDHYSC-LVDVLSRAGRL 219
K + +F G+L AC R + A S+ SC ++D ++ G++
Sbjct: 176 KFNEFSFAGLLTAC-----VKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
A M VK W L+ + +LG E A + E+ +N ++ L Y
Sbjct: 231 ESAKRCFDEMTVK-DIHIWTTLISG---YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 280 ASVG 283
G
Sbjct: 287 VRQG 290
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 128/211 (60%), Gaps = 3/211 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + AL + IH + + I + ++ +GLI+ Y +CG L + VF+ KD+V
Sbjct: 269 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR--KDIV 326
Query: 134 AWSSLISAYALHGEAKAALETFKEME-MAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
AW+++I+ YA+HG ++ AL F EM+ + G++P ITF+G L+AC+HAG ++ + F
Sbjct: 327 AWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFES 386
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
M ++YG++ +HY CLV +L RAG+L AYE I+ M + + W ++LG+C+ G+
Sbjct: 387 MGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFV 446
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVG 283
L + + +N+ YVLL+ +YASVG
Sbjct: 447 LGKEIAEYLIGLNIKNSGIYVLLSNIYASVG 477
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 36/191 (18%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--------------- 128
K IH + ++ + P + +GL++ Y + G +V++ VF +M +
Sbjct: 146 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 205
Query: 129 --------------DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGV-KPDGITFLGV 173
++D+V+W+ +I YA HG AL F+++ G KPD IT +
Sbjct: 206 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 265
Query: 174 LKACSHAGFADDA--LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPV 231
L ACS G + + F + R + + + L+D+ S+ G L EA V P
Sbjct: 266 LSACSQIGALETGRWIHVFVKSSR---IRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 322
Query: 232 KVTAKAWGALL 242
K AW A++
Sbjct: 323 KDIV-AWNAMI 332
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 127/236 (53%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +V AL+ + +H Y I+N I+ + G+ LI+ Y +CGCL + VF ++ + K+V
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE--KNVY 373
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+++I+ +A HG A+ A + F M + V P+ +TF+ VL AC+H G ++ F M
Sbjct: 374 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ + +E +DHY+C+VD+ R G L EA +I MP++ T WGAL G+C + L
Sbjct: 434 KGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYEL 493
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ A +++P ++ Y LLA +Y+ V + G SW+
Sbjct: 494 GKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI 549
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+GS L++ YG+C C ++ VF +M ++VV W++LI+ Y + F+EM
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPS--RNVVTWTALIAGYVQSRCFDKGMLVFEEMLK 299
Query: 161 AGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 217
+ V P+ T VL AC+H G CY + +E ++ + L+D+ + G
Sbjct: 300 SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK----NSIEINTTAGTTLIDLYVKCG 355
Query: 218 RLHEAYEVIRGMPVKVTAKAWGALL 242
L EA V + K W A++
Sbjct: 356 CLEEAILVFERLHEK-NVYTWTAMI 379
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
+ H + ++ +D P + + LI Y G + +F D KDVV W+++I +
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAED--KDVVTWTAMIDGFVR 181
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD-YGVEASS 203
+G A A+ F EM+ GV + +T + VLKA AG +D R R +G+ +
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKA---AGKVED-----VRFGRSVHGLYLET 233
Query: 204 DHYSC-------LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
C LVD+ + +A +V MP + W AL+
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIA 279
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 146/300 (48%), Gaps = 6/300 (2%)
Query: 17 ELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVN 76
++F M + T+N +I+ N+ KA+ L M +
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYI-HNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
VA L E+H +R ++ +GS L++ Y +CG L + F+ M ++ +W+
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV--RNSYSWN 689
Query: 137 SLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
S+IS YA HG+ + AL+ F+ M++ G PD +TF+GVL ACSHAG ++ +F M
Sbjct: 690 SMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSD 749
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC--RNFGELGL 253
YG+ +H+SC+ DVL RAG L + + I MP+K W +LGAC N + L
Sbjct: 750 SYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAEL 809
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYSE 313
+ A ++EPENA NYVLL MYA+ G VK G SWV +
Sbjct: 810 GKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKD 869
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
L K+IHG ++N+I + LI YG+CG + +FS+M + +D V W+S+IS
Sbjct: 535 LGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAE-RRDNVTWNSMISG 593
Query: 142 YALHGEAKA-ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 200
Y +H E A AL+ M G + D + VL A FA A ++R V
Sbjct: 594 Y-IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA-----FASVAT-----LERGMEVH 642
Query: 201 ASSDHY---------SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
A S S LVD+ S+ GRL A MPV+ + +W +++ G+
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQ 700
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 84 KEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
+E+HG+ I +D +G+GL+ Y +CG + ++ VF M DKD V+W+S+I+
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM--TDKDSVSWNSMITGL 390
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
+G A+E +K M + P T + L +C+ +A + G++ +
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK-LGIDLN 449
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ L+ + + G L+E ++ MP + +W +++GA
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
H +N +D L + LI AY G V++ VF +M ++ V+W+ ++S Y+ +
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL--RNCVSWACIVSGYSRN 80
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
GE K AL ++M G+ + F+ VL+AC G
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++++YA ++ A +F+ M + ++N +I L QN +A+ Y+ M
Sbjct: 355 LVNMYAKCG-SIADARRVFYFM-TDKDSVSWNSMITGLD-QNGCFIEAVERYKSMRRHDI 411
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++ L ++IHG ++ ID + + + L+ Y G L
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEA-KAALETFKEMEMAGVKPDGITF 170
+FS M + D+ V+W+S+I A A + A+ F + AG K + ITF
Sbjct: 472 IFSSMPEHDQ--VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 121/226 (53%), Gaps = 1/226 (0%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K+IHG +++ + + LI Y + G + ++ F +R ++D V+W+S+I A A
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR-CERDTVSWTSMIIALA 491
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
HG A+ ALE F+ M M G++PD IT++GV AC+HAG + YF M+ + +
Sbjct: 492 QHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTL 551
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
HY+C+VD+ RAG L EA E I MP++ WG+LL ACR + L ++A
Sbjct: 552 SHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL 611
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+EPEN+ Y LA +Y++ G VK G SW+
Sbjct: 612 LEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 161/310 (51%), Gaps = 11/310 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ Y+ + D L +A +LF M V + +++N +IA L + N S +A+ LY++M
Sbjct: 150 LLDAYSKNGD-LISAYKLFDEMPVR-DVASWNALIAGLVSGNRAS-EAMELYKRMETEGI 206
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEI-HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C ++ + + I HGY N I + + I+ Y +CG + +
Sbjct: 207 RRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAY 261
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF + K VV W+++I+ +A+HGEA ALE F ++E G+KPD +++L L AC H
Sbjct: 262 QVFEQFTG-KKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRH 320
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
AG + L F M GVE + HY C+VD+LSRAGRL EA+++I M + W
Sbjct: 321 AGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQ 379
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
+LLGA + ++ +AEIA R E+ N ++VLL+ +YA+ G
Sbjct: 380 SLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQ 439
Query: 300 VKSTTGSSWV 309
VK G S++
Sbjct: 440 VKKIPGLSYI 449
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX------XXXX 64
+L A+++F + P + +N II A + S A + YR M
Sbjct: 52 DLSFAVQIFRYIPKPLT-NDWNAIIRGFAGSSHPSL-AFSWYRSMLQQSSSSSAICRVDA 109
Query: 65 XXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSK 124
C + + ++H R + L + L++AY + G L+++ +F +
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 125 MRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 184
M +DV +W++LI+ A A+E +K ME G++ +T + L ACSH G
Sbjct: 170 MP--VRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK 227
Query: 185 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ F D + +++ +D+ S+ G + +AY+V K + W ++
Sbjct: 228 EGENIFHGYSNDNVIVSNA-----AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 245 CRNFGE 250
GE
Sbjct: 283 FAVHGE 288
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 5/272 (1%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIR--NDIDP 97
AQN +A ++ +M C + L +++ Y + N
Sbjct: 280 AQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSS 339
Query: 98 HPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKE 157
H + LI+ +CG + + +F +M +D+V++ S++ A+HG A+ F++
Sbjct: 340 H-YVVPALIDMNAKCGHMDRAAKLFEEMPQ--RDLVSYCSMMEGMAIHGCGSEAIRLFEK 396
Query: 158 MEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 217
M G+ PD + F +LK C + ++ L YF M++ Y + AS DHYSC+V++LSR G
Sbjct: 397 MVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTG 456
Query: 218 RLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAK 277
+L EAYE+I+ MP + A AWG+LLG C G +AE+ R E+EP++A +YVLL+
Sbjct: 457 KLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSN 516
Query: 278 MYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+YA++ G+ G SW+
Sbjct: 517 IYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ +I+ Y + G +V++ ++F + R +D V AWS+LI YA +G+ A + F EM
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVD--VRAWSALILGYAQNGQPNEAFKVFSEMCAKN 299
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY--SCLVDVLSRAGRLH 220
VKPD +G++ ACS G + LC + S HY L+D+ ++ G +
Sbjct: 300 VKPDEFIMVGLMSACSQMGCFE--LCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMD 357
Query: 221 EAYEVIRGMPVK 232
A ++ MP +
Sbjct: 358 RAAKLFEEMPQR 369
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N + + +HG +R D +G+ ++ YG+C L ++ VF +M +++ V
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMP--ERNAV 177
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W++L+ AY GE + A F M + G++K +G +A F M
Sbjct: 178 SWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVK----SGDLVNAKKLFDEM 233
Query: 194 -QRDYGVEASSDHYSCLVDVLSRAGRL---HEAYEVIRGMPVKVTAKAWGAL-LGACRN 247
+RD Y+ ++D ++ G + + +E RG+ V +AW AL LG +N
Sbjct: 234 PKRDI------ISYTSMIDGYAKGGDMVSARDLFEEARGVDV----RAWSALILGYAQN 282
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 138/272 (50%), Gaps = 4/272 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L A +LF LM N ++ +I + D AI+ Y +M
Sbjct: 243 LNRAKQLFELMP-EKNVVSWTTLINGFSQTGDYE-TAISTYFEMLEKGLKPNEYTIAAVL 300
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C AL IHGY + N I +G+ L++ Y +CG L + VFS M KD
Sbjct: 301 SACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH--KD 358
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+++W+++I +A+HG A++ F++M +G KPD + FL VL AC ++ D L +F
Sbjct: 359 ILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFD 418
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ DY +E + HY +VD+L RAG+L+EA+E++ MP+ W AL AC+
Sbjct: 419 SMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGY 478
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
AE + E++PE +Y+ L K +AS G
Sbjct: 479 RRAESVSQNLLELDPELCGSYIFLDKTHASKG 510
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 150/284 (52%), Gaps = 9/284 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++Y D + +A+++F L+ PN ++N +I+AL+ QN + L+R +
Sbjct: 622 LITMYGRCKD-IESAVKVFGLIS-DPNLCSWNCVISALS-QNKAGREVFQLFRNLKLEPN 678
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
+ + + + H + IR +P + + L++ Y CG L
Sbjct: 679 EITFVGLLSAS---TQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMK 735
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM-AGVKPDGITFLGVLKACSH 179
VF + AW+S+ISA+ HG + A+E FKE+ + ++P+ +F+ +L ACSH
Sbjct: 736 VFRN--SGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSH 793
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
+GF D+ L Y+ +M+ +GV+ ++H +VD+L RAG+L EAYE I G+ A WG
Sbjct: 794 SGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWG 853
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
ALL AC G+ L + E+EP+NA+ Y+ LA Y +G
Sbjct: 854 ALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLG 897
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
HG I++ + QL + LI YGRC + ++ VF + D ++ +W+ +ISA +
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLIS--DPNLCSWNCVISALS-- 658
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEAS 202
+ KA E F+ ++P+ ITF+G+L A + G + A C+ R G +A+
Sbjct: 659 -QNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIR----RGFQAN 713
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGR--- 259
+ LVD+ S G L +V R V + AW +++ A G G+ E A
Sbjct: 714 PFVSAALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISA---HGFHGMGEKAMELFK 769
Query: 260 ---ASAEVEPENAANYVLLA 276
+++E+EP ++ LL+
Sbjct: 770 ELSSNSEMEPNKSSFISLLS 789
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 151/299 (50%), Gaps = 10/299 (3%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
A E+F+ V + +N ++ + + + +++ +Y M C
Sbjct: 225 AEEIFNTTKVK-DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGAC 283
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+ + + +++H +++ + H ++GS L++ Y +CG + ++ VF +M++ K+V +
Sbjct: 284 SVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQE--KNVFS 341
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+S+I Y +G + ALE F M+ ++P+ +TFLG L ACSH+G D F MQ
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
RDY ++ +HY+C+VD++ RAG L++A+E R MP + + W ALL +C G + LA
Sbjct: 402 RDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Query: 255 EIAG----RASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
IA + +A+ P Y+ L+ +YAS + T G SW
Sbjct: 462 SIAASELFKLNADKRP---GAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWT 517
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+N A K+IH I+ P + L+ + +CGCL + VF ++ + A
Sbjct: 45 INSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPK--PTLSA 102
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFT 191
++ +IS Y HG K L + M +G K DG T VLKA + G +LC
Sbjct: 103 YNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLV 162
Query: 192 RMQ-RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
+ VE + LVD ++G+L A V M
Sbjct: 163 HARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 4/281 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++Y+ D++ T L LF + P S +N +I+ S ++ M
Sbjct: 388 LITMYS-KFDDVETVLFLFEQLQETPLIS-WNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + LNL KE+HGY +RN+ + + + LI+ Y +CG V + +
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF ++ W+S+IS Y+L G AL + EM G+KPD ITFLGVL AC+H
Sbjct: 506 VFKSIKA--PCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHG 563
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
GF D+ F M +++G+ + HY+ +V +L RA EA +I M +K + WGA
Sbjct: 564 GFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGA 623
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYAS 281
LL AC EL + E R ++ +N YVL++ +YA+
Sbjct: 624 LLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYAT 664
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + +++ +HGY I++ + + +GLI Y + + +F +++ + ++
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ--ETPLI 414
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCYFTR 192
+W+S+IS G A A E F +M + G+ PD IT +L CS LC
Sbjct: 415 SWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQ-------LCCLNL 467
Query: 193 MQRDYGVEA----SSDHYSC--LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ +G ++++ C L+D+ ++ G +A V + + TA W +++
Sbjct: 468 GKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TWNSMI 522
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+ +HG ++ ++ Q+ + LI Y +C L ++ +F +M+D K V+W+++I AY+
Sbjct: 171 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD--KSTVSWNTMIGAYS 228
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
G + A+ FK M V+ +T + +L A
Sbjct: 229 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
G+ NDI + + L+ AY RCGCLV++ +++ + +V +S++S YA G+
Sbjct: 276 GMVNDIS----VVTSLVCAYSRCGCLVSAERLYASAKQ--DSIVGLTSIVSCYAEKGDMD 329
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 184
A+ F + +K D + +G+L C + D
Sbjct: 330 IAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 146/261 (55%), Gaps = 4/261 (1%)
Query: 24 VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV-NVAALNL 82
V + ++N I++ + AQ+ S +A ++R++ V + AL +
Sbjct: 247 VDKDRVSYNSIMS-VYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI 305
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
K IH IR ++ +G+ +I+ Y +CG + + F +M++ K+V +W+++I+ Y
Sbjct: 306 GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN--KNVRSWTAMIAGY 363
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
+HG A ALE F M +GV+P+ ITF+ VL ACSHAG + +F M+ +GVE
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
+HY C+VD+L RAG L +AY++I+ M +K + W +LL ACR + LAEI+
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 263 EVEPENAANYVLLAKMYASVG 283
E++ N Y+LL+ +YA G
Sbjct: 484 ELDSSNCGYYMLLSHIYADAG 504
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 7/172 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCG--CLVNSCNVFSKMRDMDKD 131
C V A L + IH + I+ D +G+ L++AY + G + + +F ++ +DKD
Sbjct: 193 CSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI--VDKD 250
Query: 132 VVAWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
V+++S++S YA G + A E F+ + + V + IT VL A SH+G C
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH 310
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
++ R G+E + ++D+ + GR+ A + M K ++W A++
Sbjct: 311 DQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMI 360
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 124/234 (52%), Gaps = 2/234 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + AL+ + H Y RN I +L + L++ Y +CG + + VF M + K+V
Sbjct: 250 CTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE--KNVY 307
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
WSS ++ A++G + LE F M+ GV P+ +TF+ VL+ CS GF D+ +F M
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ ++G+E +HY CLVD+ +RAGRL +A +I+ MP+K A W +LL A R + L L
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLEL 427
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
+A + E+E N YVLL+ +YA GV+ G S
Sbjct: 428 GVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM------------------- 125
++HG IR D P + +GLI Y GCL + VF+ +
Sbjct: 129 QVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCG 188
Query: 126 -----RDM-----DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 175
R + ++D +AW+++IS YA GE++ AL F M++ GVK +G+ + VL
Sbjct: 189 DVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 176 ACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTA 235
AC+ G D + ++R+ ++ + + LVD+ ++ G + +A EV GM K
Sbjct: 249 ACTQLGALDQGRWAHSYIERN-KIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 236 KAWGALLGACRN-FGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
AL G N FGE L + V P NA +V + + + VG
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTP-NAVTFVSVLRGCSVVG 355
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 124/211 (58%), Gaps = 3/211 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ AL+ K++H + N + L + L+ Y RCG + + VF MR+ ++VV
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRE--RNVV 284
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W++LIS A++G K A+E F EM G+ P+ T G+L ACSH+G + + +F RM
Sbjct: 285 SWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRM 344
Query: 194 QR-DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
+ ++ ++ + HY C+VD+L RA L +AY +I+ M +K + W LLGACR G++
Sbjct: 345 RSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVE 404
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVG 283
L E E++ E A +YVLL Y++VG
Sbjct: 405 LGERVISHLIELKAEEAGDYVLLLNTYSTVG 435
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
+IHG + L + L++ Y C ++C VF ++ +D V+W+ L S Y
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK--RDTVSWNVLFSCYLR 191
Query: 145 HGEAKAALETFKEMEM---AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY---- 197
+ + L F +M+ VKPDG+T L L+AC++ G D F + D+
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALD-----FGKQVHDFIDEN 246
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG--ACRNFGELGLAE 255
G+ + + + LV + SR G + +AY+V GM + +W AL+ A FG+ +
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRER-NVVSWTALISGLAMNGFGKEAIEA 305
Query: 256 IAGRASAEVEPENAANYVLLA 276
+ PE LL+
Sbjct: 306 FNEMLKFGISPEEQTLTGLLS 326
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 143/272 (52%), Gaps = 5/272 (1%)
Query: 14 TALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
TA+ELF +D + P+ +T+N +I+ + Q +A + +M
Sbjct: 316 TAVELFEKLDSEGLKPDSATWNSLISGFS-QLGKVIEAFKFFERMLSVVMVPSLKCLTSL 374
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C ++ L KEIHG+ I+ + + + LI+ Y +CG + +F + K
Sbjct: 375 LSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPK 434
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
D V W+ +IS Y HGE ++A+E F+ + V+P TF VL ACSH G + F
Sbjct: 435 DPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIF 494
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
MQ +YG + S++H C++D+L R+GRL EA EVI M ++ +LLG+CR +
Sbjct: 495 RLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLD 553
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASV 282
L E A AE+EPEN A +V+L+ +YA++
Sbjct: 554 PVLGEEAAMKLAELEPENPAPFVILSSIYAAL 585
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L +++HG ++ + +G+ LI+ Y +C C ++ VF++++D ++++
Sbjct: 241 CASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKD-TRNLI 299
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+IS ++G+ + A+E F++++ G+KPD T+ ++ S G +A +F RM
Sbjct: 300 SWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 124/234 (52%), Gaps = 2/234 (0%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
NV ++ ++IH ++ + + + + LI Y +CG + + VF+ M + ++V++W
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN--RNVISW 543
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+S+I+ +A HG A LETF +M GVKP+ +T++ +L ACSH G + +F M
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
D+ ++ +HY+C+VD+L RAG L +A+E I MP + W LGACR L +
Sbjct: 604 DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGK 663
Query: 256 IAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+A R E++P A Y+ L+ +YA G + G SW+
Sbjct: 664 LAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK-DV 132
C+ L K +H I DI+P L + LI Y + G + +VF MR K DV
Sbjct: 72 CIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDV 131
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
V+WS++++ Y +G A++ F E G+ P+ + V++ACS++ F
Sbjct: 132 VSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF 191
Query: 193 MQRDYGVEASSDHYSCLVDVLSRA-GRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+ + E+ L+D+ + AY+V M ++ W ++ C G
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCMQMG 248
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 1/201 (0%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA-WSSLISAY 142
K H Y + I P+ L + +I+ Y +CG + + N+F + +++ ++ W+++I
Sbjct: 458 KRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGS 517
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
A HG AK AL+ + +++ +KP+ ITF+GVL AC HAG + YF M+ D+G+E
Sbjct: 518 ATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD 577
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
HY C+VD+L +AGRL EA E+I+ MPVK WG LL A R G + +AE+A A
Sbjct: 578 IKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELA 637
Query: 263 EVEPENAANYVLLAKMYASVG 283
++P + V+L+ +YA G
Sbjct: 638 AIDPSHGGCKVMLSNVYADAG 658
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 17/220 (7%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNES--TFNPIIAALAAQNDGSFKAIALYRKMXXX 58
M+ Y S L AL+LF DV P S ++ +I A N S +A+ L+R+M
Sbjct: 113 MVDGYVRSR-RLWDALKLF---DVMPERSCVSYTTLIKGYAQNNQWS-EAMELFREMRNL 167
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C ++ + + + I+ ++ + + L+ Y C CL ++
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+F +M + +++V W+ +++ Y+ G + A E F ++ + D +++ ++ C
Sbjct: 228 RKLFDEMPE--RNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDGCL 281
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
D+AL Y+T M R G++ S +VD+LS + R
Sbjct: 282 RKNQLDEALVYYTEMLR-CGMKPSE---VMMVDLLSASAR 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 86 IHGYGIRNDID-----------PHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
IH Y + NDI H + LI + + G + + VF + D KD+ +
Sbjct: 347 IHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD--KDIFS 404
Query: 135 WSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+++IS YA + AL F+EM + VKPD IT + V A S G ++ +
Sbjct: 405 WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG-----KR 459
Query: 194 QRDY----GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP--VKVTAKAWGALLGACRN 247
DY + + + + ++D+ ++ G + A + T W A++
Sbjct: 460 AHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Query: 248 FGELGLA 254
G LA
Sbjct: 520 HGHAKLA 526
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 136/262 (51%), Gaps = 3/262 (1%)
Query: 49 IALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEA 108
+ L+ KM + A+L L K++H + IR+ + GSGL++
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 109 YGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGI 168
Y +CG + ++ VF +M D ++ V+W++LISA+A +G+ +AA+ F +M +G++PD +
Sbjct: 497 YAKCGSIKDAVQVFEEMPD--RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Query: 169 TFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRG 228
+ LGVL ACSH GF + YF M YG+ HY+C++D+L R GR EA +++
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 229 MPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEP-ENAANYVLLAKMYASVGXXXX 287
MP + W ++L ACR LAE A +E +AA YV ++ +YA+ G
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 288 XXXXXXXXXXXGVKSTTGSSWV 309
G+K SWV
Sbjct: 675 VRDVKKAMRERGIKKVPAYSWV 696
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 19/264 (7%)
Query: 16 LELFHLMDVPPNES--TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXX 73
LE L D P ++N +I++ + Q D ++ +R+M
Sbjct: 302 LETRMLFDEMPELDFVSYNVVISSYS-QADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
N+++L + +++H + D +G+ L++ Y +C + +F + + V
Sbjct: 361 AANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ--RTTV 418
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL-----C 188
+W++LIS Y G A L+ F +M + ++ D TF VLKA A FA L
Sbjct: 419 SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKAS--ASFASLLLGKQLHA 476
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
+ R V + S LVD+ ++ G + +A +V MP + A +W AL+ A +
Sbjct: 477 FIIRSGNLENVFSGSG----LVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADN 531
Query: 249 --GELGLAEIAGRASAEVEPENAA 270
GE + A + ++P++ +
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVS 555
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 26/242 (10%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFN-PIIAALAAQNDGSFKAIALYRKMXXXX 59
MIS + + D + +A +LF D P+ + I+ A+N +A L+R+M
Sbjct: 85 MISGHVKTGD-VSSARDLF---DAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140
Query: 60 XXXXXXXXXXXXXX--CVNVAALNLIKEIHGYGIRNDIDPHPQL--GSGLIEAYGRCGCL 115
C + N + ++H + ++ D +P L + L+++Y L
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 116 VNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 175
+C +F ++ + KD V +++LI+ Y G ++ F +M +G +P TF GVLK
Sbjct: 201 DLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 176 ACSHAGFAD-------DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRG 228
A G D AL T RD V ++D S+ R+ E +
Sbjct: 259 AV--VGLHDFALGQQLHALSVTTGFSRDASVGNQ------ILDFYSKHDRVLETRMLFDE 310
Query: 229 MP 230
MP
Sbjct: 311 MP 312
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 5/238 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L+ K +H I + I+ + L S L++ Y +CG + S VF ++ DV
Sbjct: 175 CARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR--NDVS 232
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+++I+ +A HG A A+ F EME V PD ITFLG+L CSH G ++ YF M
Sbjct: 233 IWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLM 292
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
R + ++ +HY +VD+L RAGR+ EAYE+I MP++ W +LL + R + L
Sbjct: 293 SRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPEL 352
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVY 311
EIA + + + +YVLL+ +Y+S G++ G SW+ +
Sbjct: 353 GEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEF 407
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDAL 187
D++V+ W+ +I Y + + + AL+ K M +KP+ +F L AC+ G A
Sbjct: 126 DQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAK 185
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
+ M D G+E ++ S LVDV ++ G + + EV + + W A++
Sbjct: 186 WVHSLMI-DSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK-RNDVSIWNAMITG--- 240
Query: 248 FGELGLAEIAGRASAEVEPENAA 270
F GLA A R +E+E E+ +
Sbjct: 241 FATHGLATEAIRVFSEMEAEHVS 263
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +A N+ ++H I+ + S LI Y +CGCL ++ VF M + D+V
Sbjct: 397 CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDN--PDIV 454
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
AW++ IS +A +G A AL F++M G+KP+ +TF+ VL ACSHAG + M
Sbjct: 455 AWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM 514
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
R Y V + DHY C++D+ +R+G L EA + ++ MP + A +W L C L L
Sbjct: 515 LRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLEL 574
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
EIAG +++PE+ A YVL +Y G +K SW+
Sbjct: 575 GEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWI 630
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+L A +LF M N + +I+A A Q KA+ L+ M
Sbjct: 133 SLEDADKLFDEMS-ELNAVSRTTMISAYAEQGILD-KAVGLFSGMLASGDKPPSSMYTTL 190
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
VN AL+ ++IH + IR + + + +G++ Y +CG LV + VF +M K
Sbjct: 191 LKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM--AVK 248
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
VA + L+ Y G A+ AL+ F ++ GV+ D F VLKAC+
Sbjct: 249 KPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ LNL K+IH + ++ +G+ L++ Y +C ++C F ++R+ + V
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND--V 352
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKP-DGITFLGVLKACS-----------HAG 181
+WS++IS Y + + A++TFK + + T+ + +ACS HA
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 182 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGAL 241
+L + YG A L+ + S+ G L +A EV M AW A
Sbjct: 413 AIKRSL-----IGSQYGESA-------LITMYSKCGCLDDANEVFESMD-NPDIVAWTAF 459
Query: 242 LGACRNFG 249
+ +G
Sbjct: 460 ISGHAYYG 467
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 147/282 (52%), Gaps = 5/282 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI+ Y D + A+ELF M N +++ +I+ + QN +A+ ++ M
Sbjct: 154 MITGYQRRGD-MKAAMELFDSMP-RKNVTSWTTVISGFS-QNGNYSEALKMFLCMEKDKS 210
Query: 61 XXXXXXXXXXXX-XCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C N+ L + + + GY N + + + IE Y +CG + +
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
+F ++ + +++ +W+S+I + A HG+ AL F +M G KPD +TF+G+L AC H
Sbjct: 271 RLFEELGN-QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVH 329
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
G F M+ + + +HY C++D+L R G+L EAY++I+ MP+K A WG
Sbjct: 330 GGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWG 389
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYAS 281
LLGAC G + +AEIA A ++EP N N V+++ +YA+
Sbjct: 390 TLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAA 431
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
++ +H R+ + + LI AY + G L + VF +M +DV W+++I+ Y
Sbjct: 101 LRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK--RDVPVWNAMITGY 158
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
G+ KAA+E F M V ++ V+ S G +AL F M++D V+ +
Sbjct: 159 QRRGDMKAAMELFDSMPRKNV----TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 140/255 (54%), Gaps = 5/255 (1%)
Query: 30 TFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
++N +I+ + +G FK A+ ++R+M + +L L + +H
Sbjct: 241 SWNTMISGYSL--NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHL 298
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
Y + I LGS LI+ Y +CG + + +VF ++ ++V+ WS++I+ +A+HG+A
Sbjct: 299 YAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR--ENVITWSAMINGFAIHGQA 356
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
A++ F +M AGV+P + ++ +L ACSH G ++ YF++M G+E +HY C
Sbjct: 357 GDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC 416
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+VD+L R+G L EA E I MP+K W ALLGACR G + + + ++ P +
Sbjct: 417 MVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHD 476
Query: 269 AANYVLLAKMYASVG 283
+ YV L+ MYAS G
Sbjct: 477 SGAYVALSNMYASQG 491
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 6/187 (3%)
Query: 92 RNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAA 151
R D L + +I+ Y R G + +F KMR + VV+W+++IS Y+L+G K A
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQ--RSVVSWNTMISGYSLNGFFKDA 258
Query: 152 LETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVD 211
+E F+EM+ ++P+ +T + VL A S G + + D G+ S L+D
Sbjct: 259 VEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGE-WLHLYAEDSGIRIDDVLGSALID 317
Query: 212 VLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE--IAGRASAEVEPENA 269
+ S+ G + +A V +P + W A++ G+ G A A V P +
Sbjct: 318 MYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV 376
Query: 270 ANYVLLA 276
A LL
Sbjct: 377 AYINLLT 383
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 149/299 (49%), Gaps = 4/299 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
L +A +F M N ++N IIAA QN ++ A+ L++++
Sbjct: 380 QLKSAEVIFDRM-AEKNVISWNSIIAAYV-QNGKNYSALELFQELWDSSLVPDSTTIASI 437
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
+L+ +EIH Y +++ + + + L+ Y CG L ++ F+ + + K
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI--LLK 495
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
DVV+W+S+I AYA+HG + ++ F EM + V P+ TF +L ACS +G D+ YF
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M+R+YG++ +HY C++D++ R G A + MP TA+ WG+LL A RN +
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ +AE A ++E +N YVLL MYA G G+ T+ S V
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTV 674
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+ IHGY +R PH L + LI+ YG CG L ++ +F +M +K+V++W+S+I+AY
Sbjct: 350 RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM--AEKNVISWNSIIAAYV 407
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
+G+ +ALE F+E+ + + PD T +L A
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 11/235 (4%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+ AL+LF M+ + +N +I + +A+ Y +M
Sbjct: 80 MEDALQLFDEMN-KADAFLWNVMIKGFTSCG-LYIEAVQFYSRMVFAGVKADTFTYPFVI 137
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
+++L K+IH I+ + + LI Y + GC ++ VF +M + +D
Sbjct: 138 KSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE--RD 195
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA---GFADDALC 188
+V+W+S+IS Y G+ ++L FKEM G KPD + + L ACSH + C
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
+ R + + G + ++D+ S+ G + A + GM ++ AW ++G
Sbjct: 256 HAVRSRIETG---DVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIG 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N +I+ A DG F ++ L+++M C +V + + KEIH +
Sbjct: 198 SWNSMISGYLALGDG-FSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCH 256
Query: 90 GIRNDIDP-HPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+R+ I+ + + +++ Y + G + + +F+ M + +++VAW+ +I YA +G
Sbjct: 257 AVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM--IQRNIVAWNVMIGCYARNGRV 314
Query: 149 KAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYS 207
A F++M E G++PD IT + +L A + + + M+R + + +
Sbjct: 315 TDAFLCFQKMSEQNGLQPDVITSINLLPA---SAILEGRTIHGYAMRRGFLPHMVLE--T 369
Query: 208 CLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
L+D+ G+L A EVI + +W +++ A
Sbjct: 370 ALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAA 405
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 129/236 (54%), Gaps = 3/236 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N L L ++IHG I++ D +GS L+ Y +CG + VF+++ K++
Sbjct: 227 CANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPV--KNLG 284
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W++++ AYA H + +E FK M+++G+KP+ ITFL VL ACSHAG D+ YF +M
Sbjct: 285 IWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM 344
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
++ +E + HY+ LVD+L RAGRL EA EVI MP+ T WGALL +C L
Sbjct: 345 -KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTEL 403
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A A E+ P ++ ++ L+ YA+ G G K TG SWV
Sbjct: 404 AAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWV 459
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 19/250 (7%)
Query: 1 MISLYAHS--PDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXX 58
+I+ Y+ S P + A E D P ST I + AQN+ + ++ +KM
Sbjct: 56 LINFYSKSQLPFDSRRAFE-----DSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAG 110
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C ++ ++ + +H ++ D +GS L++ Y +CG +V +
Sbjct: 111 NLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYA 170
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+F +M ++VV WS ++ YA GE + AL FKE + + +F V+ C
Sbjct: 171 RKMFDEMPQ--RNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVC- 227
Query: 179 HAGFADDALCYFTR----MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
A+ L R + ++SS S LV + S+ G AY+V +PVK
Sbjct: 228 ----ANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-N 282
Query: 235 AKAWGALLGA 244
W A+L A
Sbjct: 283 LGIWNAMLKA 292
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 142/267 (53%), Gaps = 7/267 (2%)
Query: 20 HLMDVPP--NESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXXXXXCVN 76
+L D P N ++N +I+ +G FK A+ ++R+M C
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFV--RNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+ A + IH Y +RN + + + + LI+ Y +CGC+ NVF K + W+
Sbjct: 271 LGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK--KQLSCWN 328
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
S+I A +G + A++ F E+E +G++PD ++F+GVL AC+H+G A +F M+
Sbjct: 329 SMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEK 388
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEI 256
Y +E S HY+ +V+VL AG L EA +I+ MPV+ W +LL ACR G + +A+
Sbjct: 389 YMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKR 448
Query: 257 AGRASAEVEPENAANYVLLAKMYASVG 283
A + +++P+ YVLL+ YAS G
Sbjct: 449 AAKCLKKLDPDETCGYVLLSNAYASYG 475
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD-------------- 129
+++HG I+ ++ + + ++ Y CGCL+ + +F M D
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 130 ---------------KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 174
++ V+W+S+IS + +G K AL+ F+EM+ VKPDG T + +L
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 175 KACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
AC++ G ++ + R+ E +S + L+D+ + G + E V P K
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNR-FELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 235 AKAWGALLGACRN-FGELGLAEIAGRASAEVEPENAA 270
+ +LG N F E + + + +EP++ +
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN+ A L+R++ C + AAL+ ++I GY I++ ID
Sbjct: 436 QNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTS 495
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ + I Y + G + + VF ++++ DV +S++IS+ A HG A AL F+ M+
Sbjct: 496 VKTSSISMYAKSGNMPLANQVFIEVQN--PDVATYSAMISSLAQHGSANEALNIFESMKT 553
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G+KP+ FLGVL AC H G L YF M+ DY + + H++CLVD+L R GRL
Sbjct: 554 HGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLS 613
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
+A +I + W ALL +CR + + + + E+EPE + +YVLL +Y
Sbjct: 614 DAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYN 673
Query: 281 SVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
G GVK SW+V
Sbjct: 674 DSGVNSSAEEVRELMRDRGVKKEPALSWIV 703
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 18/196 (9%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C L+L + +HG + N + L + LI+ Y +CG L + ++F + + +D V
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE--RDQV 215
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS---HAGFADDAL--- 187
+W+SLIS Y G A+ L +M G+ VLKAC + GF + +
Sbjct: 216 SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
CY ++ ++ + + L+D+ ++ G L EA ++ MP K + A++
Sbjct: 276 CYTAKLGMEFDIVVR----TALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMIS---- 326
Query: 248 FGELGLAEIAGRASAE 263
G L + EI AS+E
Sbjct: 327 -GFLQMDEITDEASSE 341
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 8/182 (4%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQND----GSFKAIALYRKMX 56
++ +YA + +L A++LF LM N T+N +I+ ++ S +A L+ M
Sbjct: 293 LLDMYAKN-GSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 57 XXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLV 116
C L ++IH +N+ +GS LIE Y G
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE 410
Query: 117 NSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
+ F+ +D+ +W+S+I + + + ++A + F+++ + ++P+ T ++ A
Sbjct: 411 DGMQCFASTSK--QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSA 468
Query: 177 CS 178
C+
Sbjct: 469 CA 470
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 138/249 (55%), Gaps = 4/249 (1%)
Query: 37 ALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDID 96
A+ Q S A+ + KM C + +L + +EI+ + +ID
Sbjct: 183 AVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID 242
Query: 97 PHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFK 156
+ + + ++ + +CG + +F +M+ ++VV+WS++I YA++G+++ AL F
Sbjct: 243 CNIIVENARLDMHLKCGNTEAARVLFEEMKQ--RNVVSWSTMIVGYAMNGDSREALTLFT 300
Query: 157 EMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR--DYGVEASSDHYSCLVDVLS 214
M+ G++P+ +TFLGVL ACSHAG ++ YF+ M + D +E +HY+C+VD+L
Sbjct: 301 TMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLG 360
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVL 274
R+G L EAYE I+ MPV+ WGALLGAC ++ L + E P+ + +VL
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVL 420
Query: 275 LAKMYASVG 283
L+ +YA+ G
Sbjct: 421 LSNIYAAAG 429
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 70/174 (40%), Gaps = 8/174 (4%)
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
+K+IH +R L + L+E G + + VF +M + W++L Y
Sbjct: 27 LKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHK--PRIFLWNTLFKGY 84
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR--DYGVE 200
+ +L +K+M GV+PD T+ V+KA S G D C F YG
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG---DFSCGFALHAHVVKYGFG 141
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
+ LV + + G L A + M VK AW A L C G +A
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV-AWNAFLAVCVQTGNSAIA 194
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 2/226 (0%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
++ H ++ D G+ LI Y +CG + + VF M +D V+W++LI+A
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS--VSWNALIAALG 494
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
HG A++ ++EM G++PD IT L VL ACSHAG D YF M+ Y + +
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
DHY+ L+D+L R+G+ +A VI +P K TA+ W ALL CR G + L IA
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ PE+ Y+LL+ M+A+ G GVK SW+
Sbjct: 615 LIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWI 660
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 127 DMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FA 183
D + +VA++++IS Y G + ALE + M +G++ D T+ V++AC+ AG
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 184 DDALCYFTRMQRDYGVEASSDHY-SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
Y R E S H+ + LV + + G+ EA + MP K +W ALL
Sbjct: 306 KQVHAYVLRR------EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV-SWNALL 358
Query: 243 GACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
+ G +G A++ + E++ +N +++++ A G
Sbjct: 359 SGYVSSGHIGEAKLIFK---EMKEKNILSWMIMISGLAENG 396
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 161/292 (55%), Gaps = 19/292 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXX 58
+++ Y+ D + A ++F M P +S +N +++ QN + +AI ++ +M
Sbjct: 148 LVTFYSKCGD-MEGARQVFDRM---PEKSIVAWNSLVSGFE-QNGLADEAIQVFYQMRES 202
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C A++L +H Y I +D + +LG+ LI Y RCG + +
Sbjct: 203 GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKA 262
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM-AGVKPDGITFLGVLKAC 177
VF KM++ +V AW+++ISAY HG + A+E F +ME G P+ +TF+ VL AC
Sbjct: 263 REVFDKMKE--TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPV--KVTA 235
+HAG ++ + RM + Y + +H+ C+VD+L RAG L EAY+ I + K TA
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 236 KA-WGALLGAC---RNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
A W A+LGAC RN+ +LG+ EIA R A +EP+N ++V+L+ +YA G
Sbjct: 381 PALWTAMLGACKMHRNY-DLGV-EIAKRLIA-LEPDNPGHHVMLSNIYALSG 429
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 6/225 (2%)
Query: 21 LMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAA 79
+ VP P++ FN +I + ++ +A YR+M C +++A
Sbjct: 64 FLSVPLPDDFLFNSVIKS-TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L + K +H + + + + + L+ Y +CG + + VF +M + K +VAW+SL+
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPE--KSIVAWNSLV 180
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
S + +G A A++ F +M +G +PD TF+ +L AC+ G A + + G+
Sbjct: 181 SGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG-AVSLGSWVHQYIISEGL 239
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ + + L+++ SR G + +A EV M + AW A++ A
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISA 283
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 148/287 (51%), Gaps = 12/287 (4%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
IS+Y+ S D L LF +M ++ +I+ A + D +A+AL+ M
Sbjct: 297 FISMYSKSEDTCSARL-LFDIM-TSRTCVSWTVMISGYAEKGDMD-EALALFHAMIKSGE 353
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHG----YGIRNDIDPHPQLGSGLIEAYGRCGCLV 116
C +L K I YG + D + + + LI+ Y +CG +
Sbjct: 354 KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD---NVMICNALIDMYSKCGSIH 410
Query: 117 NSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
+ ++F + K VV W+++I+ YAL+G AL+ F +M KP+ ITFL VL+A
Sbjct: 411 EARDIFDNTPE--KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQA 468
Query: 177 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
C+H+G + YF M++ Y + DHYSC+VD+L R G+L EA E+IR M K A
Sbjct: 469 CAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAG 528
Query: 237 AWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
WGALL AC+ + +AE A + +EP+ AA YV +A +YA+ G
Sbjct: 529 IWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAG 575
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 29 STFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
+T+N +++ Q+ + KA +L+R+M +L L++ +H
Sbjct: 119 TTWNAMLSGFC-QSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHA 177
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
GIR +D + + I YG+CG L ++ VF + D+ VV+W+S+ AY++ GEA
Sbjct: 178 VGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA 237
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSH 179
A + M KPD TF+ + +C +
Sbjct: 238 FDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/216 (18%), Positives = 87/216 (40%), Gaps = 10/216 (4%)
Query: 39 AAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPH 98
A + +++ L+R+M C +A + + +H + I++
Sbjct: 27 AVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSD 86
Query: 99 PQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM 158
+G+ ++ + +C + + VF +M + +D W++++S + G A F+EM
Sbjct: 87 VFVGTATVDMFVKCNSVDYAAKVFERMPE--RDATTWNAMLSGFCQSGHTDKAFSLFREM 144
Query: 159 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR---DYGVEASSDHYSCLVDVLSR 215
+ + PD +T + ++++ S + +L M GV+ + + +
Sbjct: 145 RLNEITPDSVTVMTLIQSASF----EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGK 200
Query: 216 AGRLHEAYEVIRGMPV-KVTAKAWGALLGACRNFGE 250
G L A V + T +W ++ A FGE
Sbjct: 201 CGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGE 236
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 2/260 (0%)
Query: 48 AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIE 107
A+AL+++M C + AL++ IH Y + + + LG+ L++
Sbjct: 373 ALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVD 432
Query: 108 AYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 167
Y +CG + + +VF ++ ++ + ++++I ALHG+A A+ F EM AG+ PD
Sbjct: 433 MYAKCGNISEALSVFHGIQT--RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDE 490
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
ITF+G+L AC H G YF++M+ + + HYS +VD+L RAG L EA ++
Sbjct: 491 ITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLME 550
Query: 228 GMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXX 287
MP++ A WGALL CR G + L E A + E++P ++ YVLL MY
Sbjct: 551 SMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWED 610
Query: 288 XXXXXXXXXXXGVKSTTGSS 307
GV+ G S
Sbjct: 611 AKRARRMMNERGVEKIPGCS 630
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ +L I G+ ++ ++ + + I + CG + N+ VF + +D+V
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE--SPVRDLV 223
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+ LI+ Y GEA+ A+ +K ME GVKPD +T +G++ +CS G + ++ +
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ + G+ + + L+D+ S+ G +HEA + + K T +W ++ + GL
Sbjct: 284 KEN-GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISG---YARCGL 338
Query: 254 AEIAGRASAEVEPENAA 270
+++ + ++E ++
Sbjct: 339 LDVSRKLFDDMEEKDVV 355
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ +I Y RCG L S +F M + KDVV W+++I + AL F+EM+ +
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEE--KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
KPD IT + L ACS G A D + R Y + + + LVD+ ++ G + EA
Sbjct: 385 TKPDEITMIHCLSACSQLG-ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEA 443
Query: 223 YEVIRGMPVKVTAKAWGALLGA 244
V G+ + + + A++G
Sbjct: 444 LSVFHGIQTR-NSLTYTAIIGG 464
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 124/241 (51%), Gaps = 10/241 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C V AL K IH + + I+ +G+ L++ Y +CGC+ + VF K+ ++V
Sbjct: 228 CAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL--TRRNV 285
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCYFT 191
+W++LI YA +G AK A +E G+KPD + LGVL AC+H GF ++
Sbjct: 286 FSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN---- 247
M+ YG+ +HYSC+VD++ RAGRL +A ++I MP+K A WGALL CR
Sbjct: 346 NMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 248 -FGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGS 306
GEL + + VE E AA V L+ +Y SV G++ T G
Sbjct: 406 ELGELAVQNLLDLEKGNVEEEEAA-LVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGW 464
Query: 307 S 307
S
Sbjct: 465 S 465
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 74 CVNVAALNLIKEIHGYGIRNDI---DPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C+ ++ K+IH + ++N + D H Q +G++ Y L ++ VF ++
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQ--TGVLRIYVEDKLLFDARKVFDEIPQ--P 181
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
DVV W L++ Y G LE FKEM + G++PD + L AC+ G
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
+++ +E+ + LVD+ ++ G + A EV + + +W AL+G +
Sbjct: 242 EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-TRRNVFSWAALIGG---YAA 297
Query: 251 LGLAEIAGRASAEVEPEN 268
G A+ A +E E+
Sbjct: 298 YGYAKKATTCLDRIERED 315
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 10/268 (3%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND-IDPHPQLGSGL 105
+ + ++R+M C V AL K IH + + I+ +G+ L
Sbjct: 201 EGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTAL 260
Query: 106 IEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMA-GVK 164
++ Y +CGC+ + VF K+ ++V +W++LI YA +G AK A+ + +E G+K
Sbjct: 261 VDMYAKCGCIETAVEVFKKL--TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIK 318
Query: 165 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYE 224
PD + LGVL AC+H GF ++ M+ Y + +HYSC+VD++ RAGRL +A
Sbjct: 319 PDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALN 378
Query: 225 VIRGMPVKVTAKAWGALLGACRN-----FGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
+I MP+K A WGALL CR GEL + + VE E AA V L+ +Y
Sbjct: 379 LIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAA-LVQLSNIY 437
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
SV GV+ T G S
Sbjct: 438 FSVQRNPEASKVRGMIEQRGVRKTPGWS 465
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDI---DPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C+ ++ K+IH + ++N + D H Q +G++ Y L+++ VF ++
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQ--TGVLRIYVEDKLLLDARKVFDEIPQ--P 181
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
DVV W L++ Y G LE F+EM + G++PD + L AC+ G
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+++ +E+ + LVD+ ++ G + A EV + + + +W AL+G +G
Sbjct: 242 EFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TRRNVFSWAALIGGYAAYG 299
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 153/313 (48%), Gaps = 13/313 (4%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+++LYA + A +F M V + T++ +I A+ N + I L+ +M
Sbjct: 253 LVNLYAKCG-KMEKARSVFDSM-VEKDIVTWSTMIQGYAS-NSFPKEGIELFLQMLQENL 309
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGI----RNDIDPHPQLGSGLIEAYGRCGCLV 116
C ++ AL+L + +GI R++ + + + LI+ Y +CG +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGE----WGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 117 NSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
VF +M++ KD+V ++ IS A +G K + F + E G+ PDG TFLG+L
Sbjct: 366 RGFEVFKEMKE--KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG 423
Query: 177 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
C HAG D L +F + Y ++ + +HY C+VD+ RAG L +AY +I MP++ A
Sbjct: 424 CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAI 483
Query: 237 AWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXX 296
WGALL CR + LAE + +EP NA NYV L+ +Y+ G
Sbjct: 484 VWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMN 543
Query: 297 XXGVKSTTGSSWV 309
G+K G SW+
Sbjct: 544 KKGMKKIPGYSWI 556
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 6/197 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L ++H ++ + + L+ Y G L ++ +F ++ D + VV
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD--RSVV 178
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W++L S Y G + A++ FK+M GVKPD + VL AC H G D + +
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE-WIVKY 237
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG--ACRNFGEL 251
+ ++ +S + LV++ ++ G++ +A V M V+ W ++ A +F +
Sbjct: 238 MEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKE 296
Query: 252 GLAEIAGRASAEVEPEN 268
G+ ++P+
Sbjct: 297 GIELFLQMLQENLKPDQ 313
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 147/302 (48%), Gaps = 9/302 (2%)
Query: 11 NLPTALELFHLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXX 68
N+ A +LFH + PN+ F+ +I S A L+R++
Sbjct: 392 NIQDAHKLFHRL---PNKDIIAFSGLIRGCVKSGFNSL-AFYLFRELIKLGLDADQFIVS 447
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C ++A+L K+IHG I+ + P + L++ Y +CG + N +F M +
Sbjct: 448 NILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM--L 505
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 188
++DVV+W+ +I + +G + A F +M G++P+ +TFLG+L AC H+G ++A
Sbjct: 506 ERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARS 565
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
M+ +YG+E +HY C+VD+L +AG EA E+I MP++ W +LL AC
Sbjct: 566 TLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTH 625
Query: 249 GELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSW 308
GL + + P++ + Y L+ YA++G G K +G SW
Sbjct: 626 KNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKE-SGMSW 684
Query: 309 VV 310
++
Sbjct: 685 II 686
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 16/249 (6%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+ A+ LFH M PN ++N +I+ + GS +A+ +M
Sbjct: 189 MDEAVTLFHRMP-QPNVVSWNCLISGFV--DKGSPRALEFLVRMQREGLVLDGFALPCGL 245
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMR-DMDK 130
C L + K++H +++ ++ P S LI+ Y CG L+ + +VF + + ++
Sbjct: 246 KACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-----AGFADD 185
V W+S++S + ++ E +AAL ++ + + D T G LK C + G
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 186 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
+L + + DY V S LVD+ + G + +A+++ +P K A+ L+ C
Sbjct: 366 SLVVVSGYELDYIVG------SILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGC 418
Query: 246 RNFGELGLA 254
G LA
Sbjct: 419 VKSGFNSLA 427
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C V A + I + I+ I + + + +I Y L ++ VF +M + +++V
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE--RNIV 72
Query: 134 AWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
W++++S Y G+ A+E ++ M + + + VLKAC G + + R
Sbjct: 73 TWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYER 132
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACR 246
+ ++ + + +VD+ + GRL EA + + ++ ++ +W L+ G C+
Sbjct: 133 IGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYCK 185
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 134/263 (50%), Gaps = 3/263 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+AI ++R++ C +A+L+L+++ HGY IR + +L L+
Sbjct: 551 EAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLL 609
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y +CG L ++ +VF D +D+V ++++++ YA+HG K AL + M + +KPD
Sbjct: 610 DVYAKCGSLKHAYSVFQS--DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPD 667
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
+ +L AC HAG D L + ++ +G++ + + Y+C VD+++R GRL +AY +
Sbjct: 668 HVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFV 727
Query: 227 RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXX 286
MPV+ A WG LL AC + + L + E ++ N+VL++ MYA+
Sbjct: 728 TQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWE 787
Query: 287 XXXXXXXXXXXXGVKSTTGSSWV 309
+K G SW+
Sbjct: 788 GVMELRNLMKKKEMKKPAGCSWL 810
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 41/190 (21%)
Query: 74 CVNVAALNLIKEIHGYGIRNDI---DPHPQLGSGLIEAYGRCGCLVNSCNVF---SKMRD 127
C+NV + +KE+HGY ++ + + P+LG+ L++AY +CG + + +F S+ R
Sbjct: 442 CINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRT 501
Query: 128 M---------------------------DKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ D+ WS ++ YA A+ F+E++
Sbjct: 502 LVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA 561
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYS---CLVDVLSRAG 217
G++P+ +T + +L C A A + R Y + L+DV ++ G
Sbjct: 562 RGMRPNTVTIMNLLPVC-----AQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCG 616
Query: 218 RLHEAYEVIR 227
L AY V +
Sbjct: 617 SLKHAYSVFQ 626
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 84 KEIHGYGI-RNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
++IH Y + R+ + H + + L+ Y R G + + ++F++M KD+V+W+ +I+ Y
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS--KDLVSWNVVIAGY 304
Query: 143 ALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSH-AGFADDALCYFTRMQRDYGVE 200
A + E A + F + G V PD +T + +L C+ A + ++ Y +E
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+S + L+ +R G AY M K +W A+L A
Sbjct: 365 DTSVG-NALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 127/270 (47%), Gaps = 3/270 (1%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
AQN + LY+ M C ++A ++IH I+
Sbjct: 168 AQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVV 227
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM- 158
+ S LI Y +CGCL ++ FS+ D D+ V WSS+ISAY HG+ A+E F M
Sbjct: 228 AVVSSLISMYSKCGCLGDAAKAFSEREDEDE--VMWSSMISAYGFHGQGDEAIELFNTMA 285
Query: 159 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
E ++ + + FL +L ACSH+G D L F M YG + HY+C+VD+L RAG
Sbjct: 286 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 345
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKM 278
L +A +IR MP+K W LL AC +A+ + +++P ++A YVLLA +
Sbjct: 346 LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANV 405
Query: 279 YASVGXXXXXXXXXXXXXXXGVKSTTGSSW 308
+AS VK G SW
Sbjct: 406 HASAKRWRDVSEVRKSMRDKNVKKEAGISW 435
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 9/180 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNE--STFNPIIAALAAQNDGSFKAIALYRKMXXX 58
+I+ Y + D L A ++F D P+ +T+N +IA L Q + + + ++L+R+M
Sbjct: 31 LINGYVRAGD-LVNARKVF---DEMPDRKLTTWNAMIAGLI-QFEFNEEGLSLFREMHGL 85
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
+ ++++ ++IHGY I+ ++ + S L Y R G L +
Sbjct: 86 GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDG 145
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
V M +++VAW++LI A +G + L +K M+++G +P+ ITF+ VL +CS
Sbjct: 146 EIVIRSMPV--RNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
LI Y R G LVN+ VF +M D + + W+++I+ + L F+EM G
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPD--RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 165 PDGITFLGVLKACS---HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 221
PD T V + Y + YG+E S L + R G+L +
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK----YGLELDLVVNSSLAHMYMRNGKLQD 144
Query: 222 AYEVIRGMPVKVTAKAWGALL 242
VIR MPV+ AW L+
Sbjct: 145 GEIVIRSMPVR-NLVAWNTLI 164
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 146/311 (46%), Gaps = 10/311 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I +Y+ ++ +LF M + +N II A A + +AI L+ ++
Sbjct: 308 LIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPE--RAIHLFGQLRQEKL 365
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + IH I+ L + LI AY +CG L
Sbjct: 366 SPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMR 425
Query: 121 VFSKMRDMD-KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF DMD +DVV+W+S++ AY+LHG+ + L F++M+ + PD TF+ +L ACSH
Sbjct: 426 VFD---DMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSH 479
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
AG ++ L F M +HY+C++D+LSRA R EA EVI+ MP+ A W
Sbjct: 480 AGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWI 539
Query: 240 ALLGACRNFGELGLAEIAGRASAE-VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXX 298
ALLG+CR G L ++A E VEP N+ +Y+ ++ +Y + G
Sbjct: 540 ALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETW 599
Query: 299 GVKSTTGSSWV 309
V+ SW
Sbjct: 600 RVRKEPDLSWT 610
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 131/261 (50%), Gaps = 3/261 (1%)
Query: 23 DVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNL 82
D+P +S + Q + +A++R+M C + AL
Sbjct: 194 DMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKH 253
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
K +HG+ IR LG+ + + Y +C L + VF M +DV++WSSLI Y
Sbjct: 254 GKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSR--RDVISWSSLILGY 311
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
L G+ + + F EM G++P+ +TFLGVL AC+H G + + YF R+ ++Y +
Sbjct: 312 GLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF-RLMQEYNIVPE 370
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
HY+ + D +SRAG L EA + + MPVK GA+L C+ +G + + E R
Sbjct: 371 LKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELI 430
Query: 263 EVEPENAANYVLLAKMYASVG 283
+++P A+ YV LA +Y++ G
Sbjct: 431 QLKPRKASYYVTLAGLYSAAG 451
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 133/270 (49%), Gaps = 2/270 (0%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
+QN + + + + +M C ++++L L +++ +D
Sbjct: 426 SQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQ 485
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ S LI+ Y +CG + + VF M + D V W+S+IS YA +G+ A++ FK+M
Sbjct: 486 VVSSSLIDLYCKCGFVEHGRRVFDTM--VKSDEVPWNSMISGYATNGQGFEAIDLFKKMS 543
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
+AG++P ITF+ VL AC++ G ++ F M+ D+G +H+SC+VD+L+RAG +
Sbjct: 544 VAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYV 603
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
EA ++ MP V W ++L C G + + A E+EPEN+ YV L+ ++
Sbjct: 604 EEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIF 663
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A+ G V GSSW
Sbjct: 664 ATSGDWESSALVRKLMRENNVTKNPGSSWT 693
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 110/185 (59%), Gaps = 4/185 (2%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
LG+ L++ Y + G L + +F++M+D KDV +W+++IS Y HG A+ A+ F +ME
Sbjct: 365 LGTALVDMYAKVGLLEKAVEIFNRMKD--KDVKSWTAMISGYGAHGLAREAVTLFNKMEE 422
Query: 161 AG--VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
V+P+ ITFL VL ACSH G + + F RM Y +HY C+VD+L RAG+
Sbjct: 423 ENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQ 482
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKM 278
L EAYE+IR +P+ + AW ALL ACR +G L E AE+ + A+ +LLA
Sbjct: 483 LEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGT 542
Query: 279 YASVG 283
+A G
Sbjct: 543 HAVAG 547
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H I+ +D L + LI YG+ G + ++ +F + KDVV W+ +I YA G
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCA--IRKDVVTWNCMIDQYAKTG 307
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKAC--SHAGFADDALCYFTRMQRDYGVEASSD 204
+ + ++M+ +KP+ TF+G+L +C S A F + +R + +
Sbjct: 308 LLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEER---IALDAI 364
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
+ LVD+ ++ G L +A E+ M K K+W A++ +G GLA A ++
Sbjct: 365 LGTALVDMYAKVGLLEKAVEIFNRMKDK-DVKSWTAMISG---YGAHGLAREAVTLFNKM 420
Query: 265 EPEN 268
E EN
Sbjct: 421 EEEN 424
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 2/210 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ +L+ + +H Y ++ I+ L + L++ Y +CG + + VF +DV
Sbjct: 314 CASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSK--RDVS 371
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+S+IS ++HG K ALE F EM G KP+GITF+GVL AC+H G D A F M
Sbjct: 372 TWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMM 431
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
Y VE + +HY C+VD+L R G++ EA E++ +P + +LLGAC+ FG+L
Sbjct: 432 SSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQ 491
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVG 283
AE E+ +++ Y ++ +YAS G
Sbjct: 492 AERIANRLLELNLRDSSGYAQMSNLYASDG 521
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+S+I AYA + AL F+EM + V PD +F VLKAC+ A C F ++
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACA-------AFCGFEEGRQ 161
Query: 196 DYGVEASS----DHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+G+ S D + + LV+V R+G A +V+ MPV+ A +W +LL A +
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSA---YL 217
Query: 250 ELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
E GL + A E+E N ++ + YA+ G
Sbjct: 218 EKGLVDEARALFDEMEERNVESWNFMISGYAAAG 251
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 91/235 (38%), Gaps = 18/235 (7%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN T N +I A A + A+ ++R+M C ++
Sbjct: 103 PNGFTHNSVIRAYANSSTPEV-ALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IHG I++ + + + L+ YGR G + V +M +D V+W+SL+SAY
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPV--RDAVSWNSLLSAYLEK 219
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ-RDYGVEASSD 204
G A F EME V+ G + AG +A F M RD
Sbjct: 220 GLVDEARALFDEMEERNVESWNFMISGY----AAAGLVKEAKEVFDSMPVRDVV------ 269
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG----ALLGACRNFGELGLAE 255
++ +V + G +E EV M T K G ++L AC + G L E
Sbjct: 270 SWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 143/260 (55%), Gaps = 5/260 (1%)
Query: 24 VPPNESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNL 82
V PN ++ I + + +G+F+ A+ ++ KM ++ L+
Sbjct: 357 VAPNVVSWTAIFSGCS--KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 414
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
KE+HG+ +R ++ + + L++ YG+ G L ++ +F +++ K + +W+ ++ Y
Sbjct: 415 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKN--KSLASWNCMLMGY 472
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
A+ G + + F M AG++PD ITF VL C ++G + YF M+ YG+ +
Sbjct: 473 AMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPT 532
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
+H SC+VD+L R+G L EA++ I+ M +K A WGA L +C+ +L LAEIA +
Sbjct: 533 IEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQ 592
Query: 263 EVEPENAANYVLLAKMYASV 282
+EP N+ANY+++ +Y+++
Sbjct: 593 VLEPHNSANYMMMINLYSNL 612
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
KA+ L+R+M C N ++IHGY +R ++ + + + LI
Sbjct: 72 KAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLI 131
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y R G L S VF+ M+D +++ +W+S++S+Y G A+ EME+ G+KPD
Sbjct: 132 VMYSRNGKLELSRKVFNSMKD--RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD 189
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
+T+ +L + G + DA+ RMQ G++ S+ S L+ ++ G L
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHL 241
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 39/251 (15%)
Query: 10 DNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXX 69
D+ L+ + + P+ T+N +++ A++ S AIA+ ++M
Sbjct: 172 DDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG-LSKDAIAVLKRMQIAGLKPSTSSISS 230
Query: 70 XXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
L L K IHGY +RN + + + LI+ Y + G L + VF M
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA-- 288
Query: 130 KDVVAWSSLI-----------------------------------SAYALHGEAKAALET 154
K++VAW+SL+ S YA G+ + AL+
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 348
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
+M+ GV P+ +++ + CS G +AL F +MQ + GV ++ S L+ +L
Sbjct: 349 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE-GVGPNAATMSTLLKILG 407
Query: 215 RAGRLHEAYEV 225
LH EV
Sbjct: 408 CLSLLHSGKEV 418
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 24/232 (10%)
Query: 86 IHGYGIRNDID-PHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
IHG I+ +D ++ S + YGRC L + +F +M +D +AW+ ++
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPK--RDDLAWNEIVMVNLR 66
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA-GFADDALC--YFTRMQRDYGVEA 201
G + A+E F+EM+ +G K T + +L+ CS+ GFA+ Y R+ G+E+
Sbjct: 67 SGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL----GLES 122
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG----ELGL---A 254
+ + L+ + SR G+L + +V M + +W ++L + G +GL
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDR-NLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 255 EIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGS 306
EI G ++P+ LL+ YAS G G+K +T S
Sbjct: 182 EICG-----LKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLKPSTSS 227
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 151/304 (49%), Gaps = 12/304 (3%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXX 70
+ +A ELF + T+N +I+ N G K A+ ++++M
Sbjct: 225 MDSARELFDRF-TEKDVVTWNAMISGYV--NCGYPKEALGIFKEMRDAGEHPDVVTILSL 281
Query: 71 XXXCVNVAALNLIKEIHGY-----GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM 125
C + L K +H Y + + I + + LI+ Y +CG + + VF +
Sbjct: 282 LSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV 341
Query: 126 RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 185
+D +D+ W++LI ALH A+ ++E F+EM+ V P+ +TF+GV+ ACSH+G D+
Sbjct: 342 KD--RDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDE 398
Query: 186 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
YF+ M+ Y +E + HY C+VD+L RAG+L EA+ + M ++ A W LLGAC
Sbjct: 399 GRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGAC 458
Query: 246 RNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTG 305
+ +G + L + A + + + +YVLL+ +YAS G VK TG
Sbjct: 459 KIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTG 518
Query: 306 SSWV 309
S +
Sbjct: 519 VSLI 522
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 113 GCLVNSCNVFSKMRDM-----DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 167
GCL C R++ +KDVV W+++IS Y G K AL FKEM AG PD
Sbjct: 218 GCL--KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDV 275
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS----SDHYSCLVDVLSRAGRLHEAY 223
+T L +L AC+ G + + V +S + ++ L+D+ ++ G + A
Sbjct: 276 VTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAI 335
Query: 224 EVIRGMPVKVTAKAWGALL 242
EV RG+ + W L+
Sbjct: 336 EVFRGVKDR-DLSTWNTLI 353
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 132/264 (50%), Gaps = 5/264 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A+ L+R M C AL K IHGY N + +G+ L+
Sbjct: 262 EALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALV 321
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y +CGC+ + VF ++++ +D +W+SLI A++G + AL+ + EME GV+ D
Sbjct: 322 DMYAKCGCIETALEVFYEIKE--RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLD 379
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
ITF+ VL AC+H GF + F M + V+ S+H SCL+D+L RAG L EA E+I
Sbjct: 380 AITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELI 439
Query: 227 ---RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
RG + + +LL A RN+G + +AE +VE +++ + LLA +YAS
Sbjct: 440 DKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASAN 499
Query: 284 XXXXXXXXXXXXXXXGVKSTTGSS 307
G++ G S
Sbjct: 500 RWEDVTNVRRKMKDLGIRKFPGCS 523
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 45/279 (16%)
Query: 16 LELFH-LMDVPPNES--TFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXX-XXXXX 70
+E+ H + D P ++N +I++ +G F+ AI ++++M
Sbjct: 97 IEITHKVFDEMPQRDVVSWNGLISSYVG--NGRFEDAIGVFKRMSQESNLKFDEGTIVST 154
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD- 129
C + L + + I+ + + + + ++G+ L++ + +CGCL + VF MRD +
Sbjct: 155 LSACSALKNLEIGERIYRF-VVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 130 ----------------------------KDVVAWSSLISAYALHGEAKAALETFKEMEMA 161
KDVV W+++++ Y ALE F+ M+ A
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 162 GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 221
G++PD + +L C+ G + + + V + LVD+ ++ G +
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENR-VTVDKVVGTALVDMYAKCGCIET 332
Query: 222 AYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRA 260
A EV + + TA +W +L+ +G L + ++GRA
Sbjct: 333 ALEVFYEIKERDTA-SWTSLI-----YG-LAMNGMSGRA 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+++HGY ++ ++ + + L+ Y G + + VF +M +DVV+W+ LIS+Y
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQ--RDVVSWNGLISSYV 123
Query: 144 LHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG---- 198
+G + A+ FK M + + +K D T + L ACS AL +R Y
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACS-------ALKNLEIGERIYRFVVT 176
Query: 199 -VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
E S + LVD+ + G L +A V M K K W +++
Sbjct: 177 EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK-NVKCWTSMV 220
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 134/271 (49%), Gaps = 8/271 (2%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
A ELF M + + ++N +I+ A N +AI L+ +M C
Sbjct: 202 ARELFDSMPLR-DLVSWNSLISGYAQMNHCR-EAIKLFDEMVALGLKPDNVAIVSTLSAC 259
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
K IH Y R + L +GL++ Y +CG + + +F D K +
Sbjct: 260 AQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSD--KTLFT 317
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+++I+ A+HG + ++ F++M +G+KPDG+TF+ VL CSH+G D+A F +M+
Sbjct: 318 WNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMR 377
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPV----KVTAKAWGALLGACRNFGE 250
Y V HY C+ D+L RAG + EA E+I MP + AW LLG CR G
Sbjct: 378 SLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGN 437
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYAS 281
+ +AE A + PE+ Y ++ +MYA+
Sbjct: 438 IEIAEKAANRVKALSPEDGGVYKVMVEMYAN 468
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 131/263 (49%), Gaps = 2/263 (0%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A+++Y++M C +V+ALN+ +H + + + LI
Sbjct: 191 QALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALI 250
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y +CG L N+ VF+ MR +DV+ W+S+I Y +HG A+ F++M +GV+P+
Sbjct: 251 DMYAKCGSLENAIGVFNGMRK--RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPN 308
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
ITFLG+L CSH G + + +F M + + + HY C+VD+ RAG+L + E+I
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMI 368
Query: 227 RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXX 286
W LLG+C+ L L E+A + ++E NA +YVL+ +Y++
Sbjct: 369 YASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQ 428
Query: 287 XXXXXXXXXXXXGVKSTTGSSWV 309
+++ G SW+
Sbjct: 429 AFASMRKLIRSHDLQTVPGWSWI 451
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 6/233 (2%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXX-XXXXXXX 69
+L A LF D P+ S +N +I + + +I Y +M
Sbjct: 54 SLSHAQLLFDHFDSDPSTSDWNYLIRGFS-NSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 70 XXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
C + ++ EIHG IR+ + + L+ Y G + + VF +M
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPV-- 170
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
+D+V+W+ +I ++ G AL +K M GV D T + +L +C+H A +
Sbjct: 171 RDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVS-ALNMGVM 229
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
R+ D E+ + L+D+ ++ G L A V GM K W +++
Sbjct: 230 LHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMI 281
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 135/264 (51%), Gaps = 5/264 (1%)
Query: 22 MDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALN 81
M+ + +N II+ + QN +A+ L+ +M C ++ +L
Sbjct: 402 MESEKDIVAWNSIISGFS-QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLA 460
Query: 82 LIKEIHGYGIRNDI--DPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
+ +H Y ++ +G+ L++ Y +CG ++ +F + + K+ + WS++I
Sbjct: 461 VGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE--KNTITWSAMI 518
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
Y G+ +LE F+EM KP+ TF +L AC H G ++ YF+ M +DY
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNF 578
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGR 259
S+ HY+C+VD+L+RAG L +A ++I MP++ + +GA L C L EI +
Sbjct: 579 TPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIK 638
Query: 260 ASAEVEPENAANYVLLAKMYASVG 283
++ P++A+ YVL++ +YAS G
Sbjct: 639 KMLDLHPDDASYYVLVSNLYASDG 662
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
+ND + + L+ +M C ++AL+ K HG +++ I+
Sbjct: 218 VKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSS 277
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
L + L++ Y +CG + N+ VF++ +D +V W+++I Y +G AL F++M+
Sbjct: 278 CLVTSLLDMYVKCGDISNARRVFNEHSHVD--LVMWTAMIVGYTHNGSVNEALSLFQKMK 335
Query: 160 MAGVKPDGITFLGVLKACS----------------HAGFADD----------ALCYFTRM 193
+KP+ +T VL C G D A CY R
Sbjct: 336 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRD 395
Query: 194 QRDYGVEASSDH----YSCLVDVLSRAGRLHEAYEVIRGM------PVKVTAKAWGALLG 243
+ Y E S+ ++ ++ S+ G +HEA + M P VT +L
Sbjct: 396 AK-YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV---ASLFS 451
Query: 244 ACRNFGELGLA 254
AC + G L +
Sbjct: 452 ACASLGSLAVG 462
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A++L++KM C + L L + +HG I+ I + + L+
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALV 384
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y +C ++ VF + +KD+VAW+S+IS ++ +G AL F M V P+
Sbjct: 385 HMYAKCYQNRDAKYVFE--MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 167 GITFLGVLKACSHAG-FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
G+T + AC+ G A + + ++ + +S + L+D ++ G A +
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 226 IRGMPVKVTAKAWGALLGA 244
+ K T W A++G
Sbjct: 503 FDTIEEKNTI-TWSAMIGG 520
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 123/210 (58%), Gaps = 3/210 (1%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM-E 159
+G+ L++ Y + G L + +F KM+ ++VV+W++LIS A++G+ + ++ F M E
Sbjct: 272 VGNALVDFYCKSGDLEAATAIFRKMQR--RNVVSWNTLISGSAVNGKGEFGIDLFDAMIE 329
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
V P+ TFLGVL CS+ G + F M + +EA ++HY +VD++SR+GR+
Sbjct: 330 EGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRI 389
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
EA++ ++ MPV A WG+LL ACR+ G++ LAE+A ++EP N+ NYVLL+ +Y
Sbjct: 390 TEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLY 449
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A G ++ +TG S +
Sbjct: 450 AEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 128/234 (54%), Gaps = 2/234 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ AL+L K I+ Y +N I +LG+ L++ + RCG ++ ++F+ + ++DV
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL--TNRDVS 537
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
AW++ I A A+ G A+ A+E F +M G+KPDG+ F+G L ACSH G F M
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ +GV HY C+VD+L RAG L EA ++I MP++ W +LL ACR G + +
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
A A + PE +YVLL+ +YAS G G++ G+S
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 36/187 (19%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K HGY +RN + + + LI+ Y +C + +F +M + K VV W+S+++ Y
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN--KTVVTWNSIVAGYV 414
Query: 144 LHGEAKAALETFKEM--------------------------------EMAGVKPDGITFL 171
+GE AA ETF+ M GV DG+T +
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 172 GVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPV 231
+ AC H G D A + ++++ G++ + LVD+ SR G A + +
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 533
Query: 232 KVTAKAW 238
+ AW
Sbjct: 534 R-DVSAW 539
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
+IHG ++ + + L+ Y CG L ++ VF +M + ++VV+W+S+I YA
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE--RNVVSWTSMICGYAR 212
Query: 145 HGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
AK A++ F M V P+ +T + V+ AC+ + + + R+ G+E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVND 271
Query: 204 DHYSCLVDVLSR------AGRLHEAY 223
S LVD+ + A RL + Y
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEY 297
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 128/234 (54%), Gaps = 2/234 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ AL+L K I+ Y +N I +LG+ L++ + RCG ++ ++F+ + ++DV
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL--TNRDVS 537
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
AW++ I A A+ G A+ A+E F +M G+KPDG+ F+G L ACSH G F M
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ +GV HY C+VD+L RAG L EA ++I MP++ W +LL ACR G + +
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
A A + PE +YVLL+ +YAS G G++ G+S
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 36/187 (19%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K HGY +RN + + + LI+ Y +C + +F +M + K VV W+S+++ Y
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN--KTVVTWNSIVAGYV 414
Query: 144 LHGEAKAALETFKEM--------------------------------EMAGVKPDGITFL 171
+GE AA ETF+ M GV DG+T +
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 172 GVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPV 231
+ AC H G D A + ++++ G++ + LVD+ SR G A + +
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 533
Query: 232 KVTAKAW 238
+ AW
Sbjct: 534 R-DVSAW 539
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
+IHG ++ + + L+ Y CG L ++ VF +M + ++VV+W+S+I YA
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE--RNVVSWTSMICGYAR 212
Query: 145 HGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
AK A++ F M V P+ +T + V+ AC+ + + + R+ G+E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSGIEVND 271
Query: 204 DHYSCLVDVLSR------AGRLHEAY 223
S LVD+ + A RL + Y
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEY 297
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 137/299 (45%), Gaps = 8/299 (2%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
ALE+FHL N T+ +I DG +A+ + +M C
Sbjct: 290 ALEVFHLAP-EKNIVTWTTMITGYGRNGDGE-QALRFFVEMMKSGVDSDHFAYGAVLHAC 347
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+A L K IHG I + +G+ L+ Y +CG + + F + +KD+V+
Sbjct: 348 SGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI--ANKDLVS 405
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W++++ A+ +HG A AL+ + M +G+KPD +TF+G+L CSH+G ++ F M
Sbjct: 406 WNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMV 465
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT----AKAWGALLGACRNFGE 250
+DY + DH +C++D+ R G L EA ++ VT +W LLGAC
Sbjct: 466 KDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWH 525
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
L + EP ++VLL+ +Y S G G+K T G SW+
Sbjct: 526 TELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWI 584
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 40/239 (16%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+AIAL+ ++ C ++ + ++I IR+ + + LI
Sbjct: 53 EAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLI 112
Query: 107 EAYGRCGCLVNSCNVFSKM------------------------------RDMDKDV-VAW 135
+ YG+C +++ VF M +M K V AW
Sbjct: 113 DMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAW 172
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+ +IS +A G+ ++ L FKEM + KPD TF ++ ACS AD + + RM
Sbjct: 173 NIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS----ADSSNVVYGRMVH 228
Query: 196 ----DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
G ++ + + ++ ++ G +A + + V +T +W +++ AC GE
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGE 286
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
Query: 47 KAIALYRKMXXXXXXX-XXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGL 105
KA+ L+R+M C + +L ++ HG +++ + + L
Sbjct: 501 KALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETAL 560
Query: 106 IEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKP 165
+ Y +CG + ++ F + + K+ V W+ +I Y +G A+ +++M +G KP
Sbjct: 561 TDMYCKCGEIDSARQFFDAV--LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKP 618
Query: 166 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
DGITF+ VL ACSH+G + L + MQR +G+E DHY C+VD L RAGRL +A ++
Sbjct: 619 DGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKL 678
Query: 226 IRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXX 285
P K ++ W LL +CR G++ LA ++P+++A YVLL+ Y+S+
Sbjct: 679 AEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQW 738
Query: 286 XXXXXXXXXXXXXGVKSTTGSSWVVY 311
V T G SW Y
Sbjct: 739 DDSAALQGLMNKNRVHKTPGQSWTTY 764
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 17/224 (7%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
P+ S +N +++ + +AI+ +R+M C + L K+
Sbjct: 379 PSVSAWNAMLSGYSNYEHYE-EAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IHG IR +I + + SGLI Y C + S +F + + D+ W+S+IS + +
Sbjct: 438 IHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCIN-ELDIACWNSMISGFRHN 496
Query: 146 GEAKAALETFKEMEMAGVK-PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
AL F+ M V P+ +F VL +CS LC ++ +G+ S
Sbjct: 497 MLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR-------LCSLLHGRQFHGLVVKSG 549
Query: 205 HYS------CLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ S L D+ + G + A + + K T W ++
Sbjct: 550 YVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV-IWNEMI 592
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 12/274 (4%)
Query: 20 HLMDVPPNESTFNPIIAALAA--QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNV 77
+ D P + A ++A +N+ S +AI L+++M C ++
Sbjct: 121 QVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADL 180
Query: 78 AALNLIKEIHGYGIRND--IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
A+ + +EI+ I+ + L + L+ Y + G + +F + M KDV +
Sbjct: 181 GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE--SMRKDVTTY 238
Query: 136 SSLISAYALHGEAKAALETFKEMEMAG------VKPDGITFLGVLKACSHAGFADDALCY 189
+S+I YAL+G+A+ +LE FK+M+ + P+ +TF+GVL ACSH+G ++ +
Sbjct: 239 TSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRH 298
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
F M DY ++ H+ C+VD+ R+G L +A+E I MP+K W LLGAC G
Sbjct: 299 FKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHG 358
Query: 250 ELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
+ L E R E++ ++ +YV L+ +YAS G
Sbjct: 359 NVELGEEVQRRIFELDRDHVGDYVALSNIYASKG 392
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 139/301 (46%), Gaps = 47/301 (15%)
Query: 15 ALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
AL LF MD VPPNE TF ++ +
Sbjct: 322 ALNLFSKMDTKEVPPNEYTFAILLNS---------------------------------- 347
Query: 72 XXCVNVAALNLIKE---IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
+A L+L+K+ +HG +++ H +G+ L+ Y + G + ++ FS M
Sbjct: 348 -----IAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGM--T 400
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 188
+D+V W+++IS + HG + ALE F M G P+ ITF+GVL+ACSH GF + L
Sbjct: 401 FRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLH 460
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
YF ++ + + V+ HY+C+V +LS+AG +A + +R P++ AW LL AC
Sbjct: 461 YFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVR 520
Query: 249 GELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSW 308
L + + E P ++ YVLL+ ++A GVK G SW
Sbjct: 521 RNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSW 580
Query: 309 V 309
+
Sbjct: 581 I 581
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 142/283 (50%), Gaps = 6/283 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++++YA S ++L A E F M V N ++N +I A +G +A+ L+ +M
Sbjct: 282 LLNMYAKS-NHLSDARECFESM-VVRNVVSWNAMIVGFAQNGEGR-EAMRLFGQMLLENL 338
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C +A+ IK++ + + + LI +Y R G L +
Sbjct: 339 QPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALL 398
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
F +R+ D+V+W+S+I A A HG A+ +L+ F+ M + ++PD ITFL VL ACSH
Sbjct: 399 CFHSIRE--PDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHG 455
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G + L F RM Y +EA +HY+CL+D+L RAG + EA +V+ MP + + A A
Sbjct: 456 GLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAA 515
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
G C + + + E+EP NY +L+ Y S G
Sbjct: 516 FTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEG 558
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++H ++ ++ + L+ YG+CG +V + VF + +D+D+V W++L+S+Y L
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV--LDRDLVLWNALVSSYVL 220
Query: 145 HGEAKAALETFKEM--EMAGVKPDGITFLGVLKACS-HAGFADDALCYFTRMQRDYGVEA 201
+G A K M + + D TF +L AC G A+ + Q D V
Sbjct: 221 NGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVAT 280
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
+ L+++ +++ L +A E M V+ +W A++ GE
Sbjct: 281 A------LLNMYAKSNHLSDARECFESMVVR-NVVSWNAMIVGFAQNGE 322
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 130/238 (54%), Gaps = 4/238 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ A++ + +H Y + I +G+ +++ Y +CG + + +F+ +R K+V
Sbjct: 316 CASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS--KNVF 373
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W++L+ A+HG +L F+EM G KP+ +TFL L AC H G D+ YF +M
Sbjct: 374 TWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKM 433
Query: 194 Q-RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL- 251
+ R+Y + +HY C++D+L RAG L EA E+++ MPVK + GA+L AC+N G L
Sbjct: 434 KSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLM 493
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
L + + ++E E++ YVLL+ ++A+ G+ GSS++
Sbjct: 494 ELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 13/174 (7%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
V L+L K IHG ++ + G+ LI+ Y +C L ++ VF ++ DK V+W
Sbjct: 216 RVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDK--VSW 273
Query: 136 SSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
+S+IS +K A++ F M+ + G+KPDG VL AC+ G D R
Sbjct: 274 NSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG-----RWV 328
Query: 195 RDY----GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+Y G++ + + +VD+ ++ G + A E+ G+ K W ALLG
Sbjct: 329 HEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK-NVFTWNALLGG 381
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K+IHG + + + L+ YG CG N+C VF +M +DVV+W+ +I+ +
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPV--RDVVSWTGIITGFT 183
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
G K AL+TF +M+ V+P+ T++ VL + G
Sbjct: 184 RTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVG 218
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 135/273 (49%), Gaps = 3/273 (1%)
Query: 38 LAAQNDGSF-KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDID 96
L +G F +A+ L++++ + A L K++ ++
Sbjct: 286 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 345
Query: 97 PHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFK 156
+ + +++ Y +CG + + F++M+ KDV++W+ +I+ Y HG K ++ F
Sbjct: 346 LETSVLNSVVDMYLKCGLVDEAEKCFAEMQL--KDVISWTVVITGYGKHGLGKKSVRIFY 403
Query: 157 EMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRA 216
EM ++PD + +L VL ACSH+G + F+++ +G++ +HY+C+VD+L RA
Sbjct: 404 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 463
Query: 217 GRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLA 276
GRL EA +I MP+K W LL CR G++ L + G+ ++ +N ANYV+++
Sbjct: 464 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 523
Query: 277 KMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+Y G G+K G SWV
Sbjct: 524 NLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 556
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 90/173 (52%), Gaps = 8/173 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + AL +IHG+ ++ + ++G+ L++ Y +CG + + VF ++ +D+ ++
Sbjct: 117 CGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI--VDRSLI 174
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVK--PDGITFLGVLKACSHAG--FADDALCY 189
+W+++I+ + G AL+TF M+ A +K PD T +LKACS G +A +
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
F ++ + +S+ LVD+ + G L A + + K T +W +L+
Sbjct: 235 FL-VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK-TMISWSSLI 285
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++H Y +++ + + LI+ Y +C + + VF M + ++VV+WS+L+S + L
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE--RNVVSWSALMSGHVL 84
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-----HAGFADDALCYFTRMQRDYGV 199
+G+ K +L F EM G+ P+ TF LKAC G C G
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL------KIGF 138
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
E + + LVD+ S+ GR++EA +V R + V + +W A++
Sbjct: 139 EMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMI 180
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 84 KEIHGYGIRNDID-PHPQLGSG-LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
K+IHG+ +R+ P +G L++ Y +CG L ++ F ++++ K +++WSSLI
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE--KTMISWSSLILG 287
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
YA GE A+ FK ++ + D ++ FAD AL + + V+
Sbjct: 288 YAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV-----FADFALLRQGKQMQALAVKL 342
Query: 202 SS----DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
S + +VD+ + G + EA + M +K +W ++ +G+ GL + +
Sbjct: 343 PSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITG---YGKHGLGKKS 398
Query: 258 GRASAE-----VEPENAANYVLLA 276
R E +EP+ +L+
Sbjct: 399 VRIFYEMLRHNIEPDEVCYLAVLS 422
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++YA D L ++ +LF+ +D N T+N ++AA A G + + L KM
Sbjct: 505 LITMYAKCGD-LSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE-EVLKLVSKMRSFGV 561
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
+A L +++HG ++ + + + + Y +CG +
Sbjct: 562 SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVK 621
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+ +++ + +W+ LISA HG + TF EM G+KP +TF+ +L ACSH
Sbjct: 622 MLPP--SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 679
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D L Y+ + RD+G+E + +H C++D+L R+GRL EA I MP+K W +
Sbjct: 680 GLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRS 739
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL +C+ G L A +++EPE+ + YVL + M+A+ G +
Sbjct: 740 LLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNI 799
Query: 301 KSTTGSSWV 309
K SWV
Sbjct: 800 KKKQACSWV 808
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 6/221 (2%)
Query: 30 TFNPIIAALAAQNDG-SFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
++N ++A+ NDG S A+ L M C + +HG
Sbjct: 329 SWNSLMASFV--NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 386
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+ + + + +G+ L+ YG+ G + S V +M +DVVAW++LI YA +
Sbjct: 387 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR--RDVVAWNALIGGYAEDEDP 444
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
AL F+ M + GV + IT + VL AC G + G E+ +
Sbjct: 445 DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNS 504
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
L+ + ++ G L + ++ G+ + W A+L A + G
Sbjct: 505 LITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHG 544
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 11/233 (4%)
Query: 21 LMDVPPNEST-FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVA- 78
L+ +P + +N +I A D KA+A ++ M C+
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPD-KALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
L K +H Y + + + + LI Y +CG L +S ++F+ + +++++ W+++
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD--NRNIITWNAM 536
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
++A A HG + L+ +M GV D +F L A + ++ + G
Sbjct: 537 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ-QLHGLAVKLG 595
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP--VKVTAKAWGALLGACRNFG 249
E S ++ D+ S+ G E EV++ +P V + +W L+ A G
Sbjct: 596 FEHDSFIFNAAADMYSKCG---EIGEVVKMLPPSVNRSLPSWNILISALGRHG 645
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+ IHG ++ D + + L+ Y G V + VF +M KD+++W+SL++++
Sbjct: 281 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT--KDLISWNSLMASFV 338
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
G + AL M +G + +TF L AC F D +F + + +G+ S
Sbjct: 339 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC----FTPD---FFEKGRILHGLVVVS 391
Query: 204 DHY------SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ + LV + + G + E+ V+ MP + AW AL+G
Sbjct: 392 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV-AWNALIGG 437
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++YA D L ++ +LF+ +D N T+N ++AA A G + + L KM
Sbjct: 488 LITMYAKCGD-LSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE-EVLKLVSKMRSFGV 544
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
+A L +++HG ++ + + + + Y +CG +
Sbjct: 545 SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVK 604
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+ +++ + +W+ LISA HG + TF EM G+KP +TF+ +L ACSH
Sbjct: 605 MLPP--SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 662
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D L Y+ + RD+G+E + +H C++D+L R+GRL EA I MP+K W +
Sbjct: 663 GLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRS 722
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL +C+ G L A +++EPE+ + YVL + M+A+ G +
Sbjct: 723 LLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNI 782
Query: 301 KSTTGSSWV 309
K SWV
Sbjct: 783 KKKQACSWV 791
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 6/221 (2%)
Query: 30 TFNPIIAALAAQNDG-SFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
++N ++A+ NDG S A+ L M C + +HG
Sbjct: 312 SWNSLMASFV--NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 369
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+ + + + +G+ L+ YG+ G + S V +M +DVVAW++LI YA +
Sbjct: 370 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR--RDVVAWNALIGGYAEDEDP 427
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
AL F+ M + GV + IT + VL AC G + G E+ +
Sbjct: 428 DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNS 487
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
L+ + ++ G L + ++ G+ + W A+L A + G
Sbjct: 488 LITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHG 527
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 11/233 (4%)
Query: 21 LMDVPPNEST-FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVA- 78
L+ +P + +N +I A D KA+A ++ M C+
Sbjct: 403 LLQMPRRDVVAWNALIGGYAEDEDPD-KALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 461
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
L K +H Y + + + + LI Y +CG L +S ++F+ + +++++ W+++
Sbjct: 462 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD--NRNIITWNAM 519
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
++A A HG + L+ +M GV D +F L A + ++ + G
Sbjct: 520 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ-QLHGLAVKLG 578
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP--VKVTAKAWGALLGACRNFG 249
E S ++ D+ S+ G E EV++ +P V + +W L+ A G
Sbjct: 579 FEHDSFIFNAAADMYSKCG---EIGEVVKMLPPSVNRSLPSWNILISALGRHG 628
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+ IHG ++ D + + L+ Y G V + VF +M KD+++W+SL++++
Sbjct: 264 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT--KDLISWNSLMASFV 321
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
G + AL M +G + +TF L AC F D +F + + +G+ S
Sbjct: 322 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC----FTPD---FFEKGRILHGLVVVS 374
Query: 204 DHY------SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ + LV + + G + E+ V+ MP + AW AL+G
Sbjct: 375 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV-AWNALIGG 420
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 120/199 (60%), Gaps = 6/199 (3%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+++HG+ IR ++ + + LI Y + G L +C +F +M +++D V+W+++ISA
Sbjct: 313 RQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM--LERDTVSWNAIISA-- 368
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
H + L+ F++M A KPDGITF+ VL C++ G +D F+ M ++YG++
Sbjct: 369 -HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKM 427
Query: 204 DHYSCLVDVLSRAGRLHEAYE-VIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
+HY+C+V++ RAG + EAY +++ M ++ WGALL AC G + E+A +
Sbjct: 428 EHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLF 487
Query: 263 EVEPENAANYVLLAKMYAS 281
E+EP+N N+ LL ++Y+
Sbjct: 488 ELEPDNEHNFELLIRIYSK 506
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 14/195 (7%)
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
Y +RN++ + S L+ Y CG + VF +M D AW+SLIS YA G+
Sbjct: 121 YLLRNNLG----ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQY 176
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA-SSDHY- 206
+ A+ + +M GVKPD TF VLKAC G ++ + RD E D Y
Sbjct: 177 EDAMALYFQMAEDGVKPDRFTFPRVLKACGGIG----SVQIGEAIHRDLVKEGFGYDVYV 232
Query: 207 -SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE-- 263
+ LV + ++ G + +A V +P K +W ++L + G L A R +
Sbjct: 233 LNALVVMYAKCGDIVKARNVFDMIPHKDYV-SWNSMLTGYLHHGLLHEALDIFRLMVQNG 291
Query: 264 VEPENAANYVLLAKM 278
+EP+ A +LA++
Sbjct: 292 IEPDKVAISSVLARV 306
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 149/310 (48%), Gaps = 9/310 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+IS+Y D L +A +F+ M + + + +I + +QN S +A L+ +M
Sbjct: 274 LISMYGKCGD-LDSARRVFNQM-IKKDRVAWTAMIT-VYSQNGKSSEAFKLFFEMEKTGV 330
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C +V AL L K+I + + + + +GL++ YG+CG + +
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF M K+ W+++I+AYA G AK AL F M V P ITF+GVL AC HA
Sbjct: 391 VFEAMPV--KNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHA 445
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G YF M +G+ +HY+ ++D+LSRAG L EA+E + P K A
Sbjct: 446 GLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAA 505
Query: 241 LLGACRNFGELGLAEIAGRASAEV-EPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
+LGAC ++ + E A R E+ E +NA NYV+ + + A + G
Sbjct: 506 ILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRG 565
Query: 300 VKSTTGSSWV 309
V T G SW+
Sbjct: 566 VVKTPGCSWI 575
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN +FN +I L + A++LYR+M C + + + +
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H + ++ + LI Y +CG + + +F ++ ++D V+W+S+IS Y+
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI--TERDTVSWNSMISGYSEA 211
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG-FADDALCYFTRMQRDYGVEASSD 204
G AK A++ F++ME G +PD T + +L ACSH G L + + G+ S+
Sbjct: 212 GYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL--STF 269
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
S L+ + + G L A V M +K AW A++
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQM-IKKDRVAWTAMI 306
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 16/317 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MIS Y+ S + A+++++ ++V +E N +I+ +N +A L +
Sbjct: 225 MISFYS-SVGLINEAMKVYNSLNVHTDEVMLNSLISG-CIRNRNYKEAFLLMSRQRPNVR 282
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + + L + K+IH +RN +L +GL++ YG+CG +V +
Sbjct: 283 VLSSSLAG-----CSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQART 337
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM--EMAGVKPDGITFLGVLKACS 178
+F + K VV+W+S+I AYA++G+ ALE F+EM E +GV P+ +TFL V+ AC+
Sbjct: 338 IFRAIPS--KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACA 395
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM----PVKVT 234
HAG + F M+ Y + ++HY C +D+LS+AG E + ++ M +
Sbjct: 396 HAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIP 455
Query: 235 AKAWGALLGACRNFGELGLAE-IAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXX 293
W A+L AC +L E +A R E PENA+ YVL++ YA++G
Sbjct: 456 CAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRG 515
Query: 294 XXXXXGVKSTTGSSWVV 310
G+ T G S +
Sbjct: 516 KLKNKGLVKTAGHSLFI 532
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+++H I+ + + LI+ Y + G LV+S VF + + KD+V+W++L+S +
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEE--KDLVSWNALLSGFL 161
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-----HAGFADDALCYFTRMQRDYG 198
+G+ K AL F M V+ T V+K C+ G A+ T RD
Sbjct: 162 RNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT--GRDLV 219
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC---RNFGE 250
V ++ ++ S G ++EA +V + V +L+ C RN+ E
Sbjct: 220 VLGTA-----MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKE 269
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 122/238 (51%), Gaps = 3/238 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L+ KE+HG ++ ++ +G+ L+ Y G + ++ +VF K+ K +V
Sbjct: 336 CSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI--FKKSIV 393
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+I A HG K A F +M +PD ITF G+L ACSH GF + F M
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Query: 194 QRDYG-VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
++ HY+C+VD+L R G+L EA E+I M VK W ALL ACR ++
Sbjct: 454 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVD 513
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
E A A ++ +++A YVLL+ +YAS G G+ GSSWVV
Sbjct: 514 RGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVV 571
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
AL+LF M N ++ +I L QN+ S +A+ L++ M C
Sbjct: 178 ALKLFKQMP-GKNVISWTTMICGLD-QNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
N A ++ ++HG I+ + + LI Y C + +S VF + + + V
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE--KVHEQVAV 293
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W++L+S Y+L+ + + AL F M + P+ TF L +CS G D + M
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLD----WGKEMH 349
Query: 195 ---RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
G+E + + LV + S +G +++A V + K + +W +++ C G
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGR 407
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 97 PHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFK 156
PH L + +I Y R LV++ N+F +M +DVV+W+S+IS G+ A++ F
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPV--RDVVSWNSMISGCVECGDMNTAVKLFD 121
Query: 157 EMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRA 216
EM V +++ ++ C +G D A F +M + ++ +V +
Sbjct: 122 EMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMP-----VKDTAAWNSMVHGYLQF 172
Query: 217 GRLHEAYEVIRGMPVKVTAKAWGALL 242
G++ +A ++ + MP K +W ++
Sbjct: 173 GKVDDALKLFKQMPGK-NVISWTTMI 197
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 142/284 (50%), Gaps = 5/284 (1%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN+ ++ +I+ L QN A+ +RKM C N+A ++
Sbjct: 331 PNQVSWTSLISGLV-QNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IHG + D GSGLI+ YG+CGC + VF + ++D V++ +++I +YA +
Sbjct: 390 IHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVD--VISLNTMIYSYAQN 447
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G + AL+ F+ M G++P+ +T L VL AC+++ ++ F ++D + ++DH
Sbjct: 448 GFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDH 506
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y+C+VD+L RAGRL EA E++ + W LL AC+ ++ +AE R E+E
Sbjct: 507 YACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIE 565
Query: 266 PENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
P + +L++ +YAS G +K SWV
Sbjct: 566 PGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWV 609
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C++ +++ IK I + +++ P GS L++A +CG + + VF M + + +V
Sbjct: 75 CIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGMSE--RHIV 131
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+SLI+ H +K A+E ++ M V PD T V KA S +A
Sbjct: 132 TWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA------- 184
Query: 194 QRDY------GVEASSDHY-SCLVDVLSRAGRLHEAYEVI 226
QR + G+E S+ S LVD+ + G+ EA V+
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 224
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ + K IHG +++ + + L+ Y RC + +S VF + ++ V
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQ--V 334
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+SLIS +G + AL F++M +KP+ T L+ CS+ ++ +
Sbjct: 335 SWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIV 394
Query: 194 QRDYGVEASSDHYSCLVDVLSRAG 217
+ YG + S L+D+ + G
Sbjct: 395 TK-YGFDRDKYAGSGLIDLYGKCG 417
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 119/210 (56%), Gaps = 3/210 (1%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM-EMA 161
+ LI Y +CG + +S F+K+ + +++V+W+S+I YA +G + A+ F++M +
Sbjct: 266 NSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDT 325
Query: 162 GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA--SSDHYSCLVDVLSRAGRL 219
++P+ +T LGVL AC+HAG + YF + DY +HY+C+VD+LSR+GR
Sbjct: 326 NLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRF 385
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
EA E+I+ MP+ W ALLG C+ LA++A E++P + ++YV+L+ Y
Sbjct: 386 KEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAY 445
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+++ G+K TG SW+
Sbjct: 446 SAMENWQNVSLIRRKMKETGLKRFTGCSWI 475
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
+ L K++H Y ++ + + +GS ++ Y + L ++ F R D +VV+ ++LI
Sbjct: 109 VKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR--DPNVVSITNLI 166
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
S Y E + AL F+ M V +T+ V+ S G ++A+ F M R+ V
Sbjct: 167 SGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK-----AWGALL 242
+ + C + +S H A + I +K K W +L+
Sbjct: 223 IPNESTFPCAITAISNIAS-HGAGKSIHACAIKFLGKRFNVFVWNSLI 269
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 141/310 (45%), Gaps = 4/310 (1%)
Query: 1 MISLYAHSPD-NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
+IS+Y P + AL LF + + ++N II A Q S A+ + +
Sbjct: 346 LISMYIQFPTGTMEDALSLFESLK-SKDLISWNSIITGFA-QKGLSEDAVKFFSYLRSSE 403
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C ++A L L ++IH ++ + + S LI Y +CG + ++
Sbjct: 404 IKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESAR 463
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
F ++ VAW+++I YA HG + +L+ F +M VK D +TF +L ACSH
Sbjct: 464 KCFQQISS-KHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSH 522
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
G + L M+ Y ++ +HY+ VD+L RAG +++A E+I MP+
Sbjct: 523 TGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLK 582
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
LG CR GE+ +A E+EPE+ YV L+ MY+ + G
Sbjct: 583 TFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERG 642
Query: 300 VKSTTGSSWV 309
VK G SW+
Sbjct: 643 VKKVPGWSWI 652
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 81 NLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLIS 140
NL+K++H ++ + + + +I +Y CG + ++ VF + KD+++W+S+I+
Sbjct: 220 NLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG-SKDLISWNSMIA 278
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS---HAGFADDALCYFTRMQRDY 197
++ H ++A E F +M+ V+ D T+ G+L ACS H F M
Sbjct: 279 GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS----LHGMVIKK 334
Query: 198 GVEASSDHYSCLVDVLSR--AGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
G+E + + L+ + + G + +A + + K +W +++ F + GL+E
Sbjct: 335 GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK-DLISWNSIITG---FAQKGLSE 390
Query: 256 IAGR-----ASAEVEPENAANYVLL 275
A + S+E++ ++ A LL
Sbjct: 391 DAVKFFSYLRSSEIKVDDYAFSALL 415
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 150/335 (44%), Gaps = 44/335 (13%)
Query: 15 ALELFHLMD---VPPNESTFNPIIAAL--------------------------------- 38
AL LF+ M VPPN T+N II +L
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Query: 39 -AAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDP 97
QN S +AI RKM C ++A+L++ + IHGY IRN
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL--Q 577
Query: 98 HPQLGS---GLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
H L S L++ Y +CG + + VF + ++ +++ISAYAL+G K A+
Sbjct: 578 HSSLVSIETSLVDMYAKCGDINKAEKVFGS--KLYSELPLSNAMISAYALYGNLKEAIAL 635
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
++ +E G+KPD IT VL AC+HAG + A+ FT + ++ +HY +VD+L+
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLA 695
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVL 274
AG +A +I MP K A+ +L+ +C + L + R E EPEN+ NYV
Sbjct: 696 SAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVT 755
Query: 275 LAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++ YA G G+K G SW+
Sbjct: 756 ISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 790
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L L KE+ Y IR+ + L S +++ Y +CG +V++ VF ++KD++ W++L+
Sbjct: 391 LKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS--TVEKDLILWNTLL 448
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
+AYA G + AL F M++ GV P+ IT+ ++ + G D+A F +MQ G+
Sbjct: 449 AAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GI 507
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAKAWGALLGACRNFGEL 251
+ ++ +++ + + G EA +R M ++ A + L AC + L
Sbjct: 508 IPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASL 562
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+HGY +++ ++ + S L + YG+CG L ++ VF ++ D ++ VAW++L+ Y +
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD--RNAVAWNALMVGYVQN 252
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD-----ALCYFTRMQRDYGVE 200
G+ + A+ F +M GV+P +T L A ++ G ++ A+ M+ D +
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 201 ASSDHYSCLVDVLSRA 216
S ++ C V ++ A
Sbjct: 313 TSLLNFYCKVGLIEYA 328
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 13/222 (5%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN + +AI L+ M N+ + K+ H I N ++
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
LG+ L+ Y + G + + VF +M +KDVV W+ +IS Y G + A+ + M +
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRM--FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRL 368
Query: 161 AGVKPDGITFLGVLKACSHA---GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 217
+K D +T ++ A + + CY R + E+ S ++D+ ++ G
Sbjct: 369 EKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR----HSFESDIVLASTVMDMYAKCG 424
Query: 218 RLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGR 259
+ +A +V V+ W LL A + E GL+ A R
Sbjct: 425 SIVDAKKVFDS-TVEKDLILWNTLLAA---YAESGLSGEALR 462
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 132/248 (53%), Gaps = 11/248 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQ-------LGSGLIEAYGRCGCLVNSCNVFSKMR 126
C L + + +H Y ++ ++ + +G+ L++ Y +CG + +S NVF MR
Sbjct: 254 CAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR 313
Query: 127 DMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 186
++VV W++L S A+HG+ + ++ F +M + VKPD +TF VL ACSH+G D+
Sbjct: 314 K--RNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEG 370
Query: 187 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACR 246
F + R YG+E DHY+C+VD+L RAG + EA ++R MPV G+LLG+C
Sbjct: 371 WRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 247 NFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGS 306
G++ +AE R ++ P N +L++ MY + G G++ G
Sbjct: 430 VHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGL 489
Query: 307 SWVVYSES 314
S + ++S
Sbjct: 490 SSIYVNDS 497
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQ--LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + + L KE+H + + P+ L + L + Y G +V + +F ++ +KD
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH---AGFADDALC 188
V W++L+S+++ +G +++ F EM V+ D ++ + + C+ GFA
Sbjct: 76 NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHG 135
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
+M GV S + L+D+ + G + E + + K + +W +L +
Sbjct: 136 VAVKM----GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK-SVVSWTVVLDTVVKW 190
Query: 249 GELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
L E E+ NA + ++ Y G
Sbjct: 191 EGL---ERGREVFHEMPERNAVAWTVMVAGYLGAG 222
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 8/282 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI Y + D + A +LF M N ++N +I QN + I L+++M
Sbjct: 213 MIHGYCNIKD-IDAARKLFDAMP-ERNLVSWNTMIGGYC-QNKQPQEGIRLFQEMQATTS 269
Query: 61 XXXXXXXXXXXXXCV-NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
+ + AL+L + H + R +D ++ + +++ Y +CG + +
Sbjct: 270 LDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
+F +M + K V +W+++I YAL+G A+AAL+ F M M KPD IT L V+ AC+H
Sbjct: 330 RIFDEMPE--KQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNH 386
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
G ++ +F M R+ G+ A +HY C+VD+L RAG L EA ++I MP +
Sbjct: 387 GGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILS 445
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYAS 281
+ L AC + ++ AE + + E+EP+N NYVLL +YA+
Sbjct: 446 SFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAA 487
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 135/286 (47%), Gaps = 10/286 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNES--TFNPIIAALAAQNDGSFKAIALYRKMXXX 58
+I +YA D L TA LF D P + ++N II + QN + +A+ ++ M
Sbjct: 257 LIDMYAKCGD-LRTARYLF---DGMPERTLVSWNSIITGYS-QNGDAEEALCMFLDMLDL 311
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
+ L + IH Y + + L+ Y + G ++
Sbjct: 312 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKAC 177
F + KD +AW+ +I A HG AL F+ M+ G PDGIT+LGVL AC
Sbjct: 372 KKAFEDLEK--KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
SH G ++ YF M+ +G+E + +HY C+VD+LSRAGR EA +++ MPVK
Sbjct: 430 SHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNI 489
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
WGALL C L L + AE E + YVLL+ +YA G
Sbjct: 490 WGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAG 535
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 18/242 (7%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
NL A +F +D P + +N +I + + KA+ Y++M
Sbjct: 56 NLSYARSVFESIDCP-SVYIWNSMIRGYSNSPNPD-KALIFYQEMLRKGYSPDYFTFPYV 113
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + + +HG+ ++ + + + + L+ Y CG + VF + +
Sbjct: 114 LKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN- 172
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA---------- 180
VVAW SLIS + + A+E F+EM+ GVK + + +L AC
Sbjct: 173 -VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFH 231
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
GF L + Q G + L+D+ ++ G L A + GMP + T +W +
Sbjct: 232 GFL-QGLGFDPYFQSKVGFNVILA--TSLIDMYAKCGDLRTARYLFDGMPER-TLVSWNS 287
Query: 241 LL 242
++
Sbjct: 288 II 289
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 147/283 (51%), Gaps = 6/283 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++YA +L +L +F M+ + ++N II+ A QN KA+ L+ +M
Sbjct: 387 LITMYAKCG-HLDKSLVIFERMN-ERDLVSWNAIISGYA-QNVDLCKALLLFEEMKFKTV 443
Query: 61 XXX-XXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C + AL + K IH IR+ I P + + L++ Y +CG L +
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQ 503
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
F + KDVV+W LI+ Y HG+ ALE + E +G++P+ + FL VL +CSH
Sbjct: 504 RCFDSISW--KDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSH 561
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
G L F+ M RD+GVE + +H +C+VD+L RA R+ +A++ + + + G
Sbjct: 562 NGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLG 621
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASV 282
+L ACR G+ + +I E++P +A +YV L +A++
Sbjct: 622 IILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAM 664
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 8/218 (3%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
KA+ ++ +M C + + +L +HGY +R+ + LI
Sbjct: 329 KALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLI 388
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKP- 165
Y +CG L S +F +M ++D+V+W+++IS YA + + AL F+EM+ V+
Sbjct: 389 TMYAKCGHLDKSLVIFERMN--ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV 446
Query: 166 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
D T + +L+ACS AG + R + + S + LVD+ S+ G L A
Sbjct: 447 DSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRC 505
Query: 226 IRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+ K +WG L+ +G G +IA +E
Sbjct: 506 FDSISWK-DVVSWGILIAG---YGFHGKGDIALEIYSE 539
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 7/163 (4%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
FN I L++ D + ++ + M C ++ L+ IH
Sbjct: 14 FNSHINHLSSHGDHK-QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
+ N + S L+ Y + G L ++ VF +MR+ +DVV W+++I Y+ G
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRE--RDVVHWTAMIGCYSRAGIVGE 130
Query: 151 ALETFKEMEMAGVKPDGITFL----GVLKACSHAGFADDALCY 189
A EM G+KP +T L GVL+ D A+ Y
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIY 173
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 5/226 (2%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
P+ ++N IAA +++D + I L++ M C + L L
Sbjct: 508 PDTVSWNIAIAA-CSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSS 566
Query: 86 IHGYGIRNDID-PHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
IHG + D + + LI+ YG+CG + + VF + R+ K+++ W++LIS +
Sbjct: 567 IHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETRE--KNLITWTALISCLGI 624
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
HG + ALE FKE G KPD ++F+ +L AC H G + + F +M +DYGVE D
Sbjct: 625 HGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMD 683
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
HY C VD+L+R G L EA +IR MP A W L C F E
Sbjct: 684 HYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAE 729
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 34/244 (13%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N II A A+++ KA+ L+ M V L+ ++IHG
Sbjct: 283 SWNAIICA-TAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGM 341
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
I+N + LG+ LI+ Y +CG L +S F +R DK++V W++L+S YA + +
Sbjct: 342 LIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR--DKNIVCWNALLSGYA-NKDGP 398
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACS------------HAGFADDALCYFTRMQRDY 197
L F +M G +P TF LK+C G+ D+ + + R Y
Sbjct: 399 ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDY-VLSSLMRSY 457
Query: 198 GVEASSDHYSCLVD----------------VLSRAGRLHEAYEVIRGMPVKVTAKAWGAL 241
+ L+D + SR G+ HE+ ++I + T +W
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTV-SWNIA 516
Query: 242 LGAC 245
+ AC
Sbjct: 517 IAAC 520
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 123/205 (60%), Gaps = 6/205 (2%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L+L K +H + +++ + +LG+ L++ Y + G L + VF +M +DK+V WS++I
Sbjct: 228 LSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERM--VDKNVWTWSAMI 285
Query: 140 SAYALHGEAKAALETF-KEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
A +G A+ AL+ F K M+ + V+P+ +TFLGVL ACSH G DD YF M++ +
Sbjct: 286 VGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHK 345
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC---RNFGELGLAE 255
++ HY +VD+L RAGRL+EAY+ I+ MP + A W LL AC + + G+ E
Sbjct: 346 IKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGE 405
Query: 256 IAGRASAEVEPENAANYVLLAKMYA 280
+ E+EP+ + N V++A +A
Sbjct: 406 KVKKRLIELEPKRSGNLVIVANRFA 430
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 14/258 (5%)
Query: 18 LFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNV 77
L H D P ST+N +++ + +D ++I +Y +M C +
Sbjct: 70 LLHSSDSTP--STWN-MLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASF 126
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
L ++I +++ D +G+ LI YG C ++ VF +M +++VV+W+S
Sbjct: 127 LGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM--TERNVVSWNS 184
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
+++A +G+ E F EM PD T + +L AC + L + M R+
Sbjct: 185 IMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG-GNLSLGKLVHSQVMVRE- 242
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
+E + + LVD+ +++G L A V M V W A++ + G AE A
Sbjct: 243 -LELNCRLGTALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMIVG---LAQYGFAEEA 297
Query: 258 GRASAEVEPENAA--NYV 273
+ +++ E++ NYV
Sbjct: 298 LQLFSKMMKESSVRPNYV 315
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 137/297 (46%), Gaps = 32/297 (10%)
Query: 15 ALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXX 73
AL+LF M +P PNE+ P N+ + +
Sbjct: 178 ALDLFREMQLPKPNEAFVRP--------NEFTMSTV---------------------LSA 208
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + AL K +H Y + ++ LG+ LI+ Y +CG L + VF+ + KDV
Sbjct: 209 CGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS-KKDVK 267
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCYFTR 192
A+S++I A++G + F EM + + P+ +TF+G+L AC H G ++ YF
Sbjct: 268 AYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKM 327
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
M ++G+ S HY C+VD+ R+G + EA I MP++ WG+LL R G++
Sbjct: 328 MIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIK 387
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E A + E++P N+ YVLL+ +YA G G+ G S+V
Sbjct: 388 TCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYV 444
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM-- 160
+ ++ AY + G + ++ +F +M + ++V++WS LI+ Y + G+ K AL+ F+EM++
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPE--RNVISWSCLINGYVMCGKYKEALDLFREMQLPK 189
Query: 161 ---AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 217
A V+P+ T VL AC G + + + Y VE + L+D+ ++ G
Sbjct: 190 PNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDK-YHVEIDIVLGTALIDMYAKCG 248
Query: 218 RLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
L A V + K KA+ A++ +G
Sbjct: 249 SLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 2/225 (0%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++H Y + +LG LI+ Y +CG + ++ VF + + K + W+++I A+
Sbjct: 371 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN--KSIDHWNAMIGGLAI 428
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
HG ++A + ++E +KPD ITF+GVL ACSH+G + L F M+R + +E
Sbjct: 429 HGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 488
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
HY C+VD+LSR+G + A +I MPV+ W L AC + E E+ +
Sbjct: 489 HYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQ 548
Query: 265 EPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
N ++YVLL+ MYAS G ++ G SW+
Sbjct: 549 AGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM-AGV 163
+I+ Y + G + ++ +F +M +DVVA++S+++ Y + ALE F +ME + +
Sbjct: 289 MIDGYAKLGFVHHAKTLFDQMPH--RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHL 346
Query: 164 KPDGITFLGVLKACSHAGFADDAL---CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
PD T + VL A + G A+ Y Q G + L+D+ S+ G +
Sbjct: 347 LPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG----VALIDMYSKCGSIQ 402
Query: 221 EAYEVIRGMPVKVTAKAWGALLG--ACRNFGELGLAEIAGRASAEVEPEN 268
A V G+ K + W A++G A GE + ++P++
Sbjct: 403 HAMLVFEGIENK-SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDD 451
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 8/239 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++AAL HGY + + + + + L++ Y +CG L + VF M +D+V
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK--RDIV 476
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W++++ + +HG K AL F M+ GV PD +T L +L ACSH+G D+ F M
Sbjct: 477 SWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM 536
Query: 194 QR-DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
R D+ V DHY+C+ D+L+RAG L EAY+ + MP + + G LL AC +
Sbjct: 537 SRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKN-- 594
Query: 253 LAEIAGRASAEVEP--ENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
AE+ S +++ E + VLL+ Y++ G+ T G SWV
Sbjct: 595 -AELGNEVSKKMQSLGETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD-KDVVAWSSLISAYAL 144
+H Y ++ + + +I Y + G L C+ F + ++ KDV++++SLI+ +
Sbjct: 330 VHCYAVKAGFILDLTVQNTIISFYAKYGSL---CDAFRQFSEIGLKDVISYNSLITGCVV 386
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-AGFADDALCYFTRMQRDYGVEASS 203
+ + + F EM +G++PD T LGVL ACSH A + C+ + Y V S
Sbjct: 387 NCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSI 446
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
+ L+D+ ++ G+L A V M K +W +L FG GL + A
Sbjct: 447 --CNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTMLFG---FGIHGLGKEA 494
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 110/272 (40%), Gaps = 43/272 (15%)
Query: 20 HLMDVPPNESTFNPIIAALA----AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV 75
H+ D P+ NPI L A ND + KA+ LY KM C
Sbjct: 56 HVFDEIPHPR-INPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACA 114
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
+ A++ K IH + +D + + L++ Y +CG L + VF +M +D+VAW
Sbjct: 115 GLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP--KRDMVAW 172
Query: 136 SSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKA----------------CS 178
+++IS ++LH + F +M + G+ P+ T +G+ A C+
Sbjct: 173 NAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCT 232
Query: 179 HAGFADDALC--------------YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYE 224
GF++D + + R D + + +S ++ + EA E
Sbjct: 233 RMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGE 292
Query: 225 VIRGMPVK-----VTAKAWGALLGACRNFGEL 251
V M V VT A G +L C FG+L
Sbjct: 293 VFFQMLVNDNVAMVTPVAIGLILMGCARFGDL 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDID-PHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C+ L L + IH + ++ + + L Y C + + +VF ++ +
Sbjct: 9 CIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINP 68
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
+AW +I AYA + A+ AL+ + +M +GV+P T+ VLKAC+ DD +
Sbjct: 69 IAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 193 MQRDYGVEASSDHYSC--LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ + ++D Y C LVD ++ G L A +V MP K AW A++
Sbjct: 129 VNCS---DFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMI 176
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 122/236 (51%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++A L ++IH ++ + + S L+ Y + G L+ + +F +D++
Sbjct: 341 CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLI 400
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+I+ YA HG K A+E + +M G KP +T+L +L ACSHAG + + +F +
Sbjct: 401 SWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDL 460
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
RD + +HY+CLVD+ RAGRL + I +++ +GA+L AC E+ +
Sbjct: 461 VRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSI 520
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A+ + E ++A YVL++ +YA+ G G+K G SWV
Sbjct: 521 AKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWV 576
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ ++ Y R L + +F +M +++VV+W+++I YA G ALE F EM
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEM--PERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
+ +++ ++KA G D+A+ F RM R V ++ +VD L++ G++ EA
Sbjct: 171 I----VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS-----WTAMVDGLAKNGKVDEA 221
Query: 223 YEVIRGMPVKVTAKAWGALL 242
+ MP + +W A++
Sbjct: 222 RRLFDCMPER-NIISWNAMI 240
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 86 IHGYGIRNDIDPHPQL-----------GSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
I GY N ID QL + +I + R + +C +F +M +K+V++
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM--PEKNVIS 297
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACS 178
W+++I+ Y + E + AL F +M G VKP+ T++ +L ACS
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 112/208 (53%), Gaps = 2/208 (0%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N+ AL K +H Y +++ + + L++ Y +CG L ++ VF ++ DVV+W
Sbjct: 540 NLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI--ATPDVVSW 597
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+ L+S A +G +AL F+EM M +PD +TFL +L ACS+ D L YF M++
Sbjct: 598 NGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKK 657
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
Y +E +HY LV +L RAGRL EA V+ M +K A + LL ACR G L L E
Sbjct: 658 IYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGE 717
Query: 256 IAGRASAEVEPENAANYVLLAKMYASVG 283
+ P + A Y+LLA +Y G
Sbjct: 718 DMANKGLALAPSDPALYILLADLYDESG 745
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSF-KAIALYRKMXXXX 59
++SLY + D + A +LF D + + F + A F A++L+ +M
Sbjct: 64 LLSLYLKT-DGIWNARKLF---DEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG 119
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C + ++ +HG I+ + + +GS L + Y +CG +C
Sbjct: 120 THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC 179
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
+FS +++ D ++W+ +IS+ + + AL+ + EM AGV P+ TF+ +L A S
Sbjct: 180 ELFSSLQN--ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSF 237
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
G + + R G+ + + LVD S+ ++ +A V+
Sbjct: 238 LGLEFGKTIHSNIIVR--GIPLNVVLKTSLVDFYSQFSKMEDAVRVL 282
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCL-VNSCNVFSKMRDMDKDV 132
C V +L+ K+IH I+ + +G+ L++ Y +C V + VF M + +V
Sbjct: 335 CSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM--VSPNV 392
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
V+W++LI HG + EM V+P+ +T GVL+ACS L
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
+ R + V+ + LVD + + ++ A+ VIR M + + +L+ F ELG
Sbjct: 453 LLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNI-TYTSLV---TRFNELG 507
Query: 253 LAEIA 257
E+A
Sbjct: 508 KHEMA 512
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + + + EIH Y +R +D +G+ L++AY + + NV M+ +D +
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKR--RDNI 494
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL---CYF 190
++SL++ + G+ + AL M G++ D ++ G + A ++ G + CY
Sbjct: 495 TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYS 554
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG--ACRNF 248
+ G ++ + LVD+ S+ G L +A +V + +W L+ A F
Sbjct: 555 VK----SGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVV-SWNGLVSGLASNGF 609
Query: 249 GELGLAEIAGRASAEVEPENAANYVLLA 276
L+ E EP++ +LL+
Sbjct: 610 ISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+G+ ++D L + L+ Y + + N+ +F +M + V AW+ +ISA+ E
Sbjct: 52 FGLLENLD----LCNNLLSLYLKTDGIWNARKLFDEMSH--RTVFAWTVMISAFTKSQEF 105
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY---GVEASSDH 205
+AL F+EM +G P+ TF V+++C AG D + Y R+ G E +S
Sbjct: 106 ASALSLFEEMMASGTHPNEFTFSSVVRSC--AGLRD--ISYGGRVHGSVIKTGFEGNSVV 161
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGM 229
S L D+ S+ G+ EA E+ +
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSL 185
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 27/200 (13%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--------DKD 131
L K IH I I + L + L++ Y + FSKM D ++D
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQ----------FSKMEDAVRVLNSSGEQD 289
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V W+S++S + + AK A+ TF EM G++P+ T+ +L CS D +
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHS 349
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
+ + G E S+D + LVD+ + + G V +W L+ + G +
Sbjct: 350 QTIK-VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFV 408
Query: 252 G-----LAEIAGRASAEVEP 266
L E+ R EVEP
Sbjct: 409 QDCFGLLMEMVKR---EVEP 425
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 118/235 (50%), Gaps = 2/235 (0%)
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+A L L K+ H IRN + + L++ Y + G + + VF K+ K++++
Sbjct: 336 TKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPR--KNIIS 393
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W++L+ YA HG A++ F++M A V P+ +TFL VL AC+++G ++ F M
Sbjct: 394 WNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMS 453
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
+G++ + HY+C++++L R G L EA IR P+K T W ALL ACR L L
Sbjct: 454 EVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELG 513
Query: 255 EIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ + PE NYV++ MY S+G G+ +WV
Sbjct: 514 RVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWV 568
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H ++ + + + GLI+ Y +CG + ++ F M + K VAW+++I+ YA
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPE--KTTVAWNNVIAGYA 301
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
LHG ++ AL +M +GV D T +++ + + + R+ G E+
Sbjct: 302 LHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN-GFESEI 360
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+ LVD S+ GR+ A V +P K +W AL+G N G
Sbjct: 361 VANTALVDFYSKWGRVDTARYVFDKLPRK-NIISWNALMGGYANHG 405
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 117/208 (56%), Gaps = 2/208 (0%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N+A + +++H + ++ + + S LI Y +CG + + +F + D D D+V+
Sbjct: 423 NMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGET-DRD-DIVSL 480
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+++I+ YA HG++K A++ F++ G +PD +TF+ VL AC+H+G D YF MQ
Sbjct: 481 TAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQE 540
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
Y + + +HY C+VD+L RAGRL +A ++I M K W LL AC+ G++
Sbjct: 541 TYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGR 600
Query: 256 IAGRASAEVEPENAANYVLLAKMYASVG 283
A E++P A V LA +Y+S G
Sbjct: 601 RAAERILELDPTCATALVTLANIYSSTG 628
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 15/256 (5%)
Query: 27 NESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
N T+ II L + G +K + + +M C + + K
Sbjct: 173 NAVTWTAIITGLV--HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IH + I + + L Y CG + + +F M + +DVV+W+SLI AY
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE--RDVVSWTSLIVAYKRI 288
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKAC---SHAGFADDALCYFTRMQRDYGVEAS 202
G+ A+ETF +M + V P+ TF + AC S + + C + G+ S
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL----GLNDS 344
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA-CR-NFGELGLAEIAGRA 260
+ ++ + S G L A + +GM + +W ++G C+ FGE G +
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 261 SAEVEPENAANYVLLA 276
+ +P + A LL+
Sbjct: 404 QSGTKPTDFALASLLS 419
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+ +H Y ++ + +GS L++ Y R G + SC VFS+M ++ V W+++I+
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP--FRNAVTWTAIITGLV 185
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
G K L F EM + D TF LKAC+
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 7/285 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++Y+ D L A +F ++ + ST+N II+ A N+ S + L ++M
Sbjct: 363 LITMYSRCSD-LRHAFIVFQQVEAN-SLSTWNSIISGFA-YNERSEETSFLLKEMLLSGF 419
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSC 119
V L KE H Y +R L + L++ Y + G ++ +
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF MR DK V ++SLI Y G+ + AL FK+M+ +G+KPD +T + VL ACSH
Sbjct: 480 RVFDSMRKRDK--VTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH 537
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
+ + FT+M+ +G+ +HYSC+VD+ RAG L +A ++ +P + ++
Sbjct: 538 SNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCA 597
Query: 240 ALLGACRNFGELGLAEIAG-RASAEVEPENAANYVLLAKMYASVG 283
LL AC G + E A + E +PE+ +Y+LLA MYA G
Sbjct: 598 TLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTG 642
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 7/285 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++Y+ D L A +F ++ + ST+N II+ A N+ S + L ++M
Sbjct: 363 LITMYSRCSD-LRHAFIVFQQVEAN-SLSTWNSIISGFA-YNERSEETSFLLKEMLLSGF 419
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSC 119
V L KE H Y +R L + L++ Y + G ++ +
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF MR DK V ++SLI Y G+ + AL FK+M+ +G+KPD +T + VL ACSH
Sbjct: 480 RVFDSMRKRDK--VTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH 537
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
+ + FT+M+ +G+ +HYSC+VD+ RAG L +A ++ +P + ++
Sbjct: 538 SNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCA 597
Query: 240 ALLGACRNFGELGLAEIAG-RASAEVEPENAANYVLLAKMYASVG 283
LL AC G + E A + E +PE+ +Y+LLA MYA G
Sbjct: 598 TLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTG 642
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 153/313 (48%), Gaps = 15/313 (4%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I LY+ + L TA LF + + ++N +I N +A+ L+++M
Sbjct: 307 LIDLYSKCGE-LETACGLFERLPYK-DVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGE 363
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGY------GIRNDIDPHPQLGSGLIEAYGRCGC 114
C ++ A+++ + IH Y G+ N L + LI+ Y +CG
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA----SSLRTSLIDMYAKCGD 419
Query: 115 LVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 174
+ + VF+ + + K + +W+++I +A+HG A A+ + F M G++PD ITF+G+L
Sbjct: 420 IEAAHQVFNSI--LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 175 KACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
ACSH+G D F M +DY + +HY C++D+L +G EA E+I M ++
Sbjct: 478 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPD 537
Query: 235 AKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXX 294
W +LL AC+ G + L E ++EPEN +YVLL+ +YAS G
Sbjct: 538 GVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRAL 597
Query: 295 XXXXGVKSTTGSS 307
G+K G S
Sbjct: 598 LNDKGMKKVPGCS 610
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 7/215 (3%)
Query: 30 TFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
++N +I+ A G++K A+ L++ M C ++ L +++H
Sbjct: 233 SWNAMISGYAET--GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+ + + ++ + LI+ Y +CG L +C +F ++ KDV++W++LI Y
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP--YKDVISWNTLIGGYTHMNLY 348
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM-QRDYGVEASSDHYS 207
K AL F+EM +G P+ +T L +L AC+H G D + +R GV +S +
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 208 CLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
L+D+ ++ G + A++V + K + +W A++
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHK-SLSSWNAMI 442
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 107/263 (40%), Gaps = 33/263 (12%)
Query: 10 DNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXX 69
+ LP A+ +F + PN +N + A +D A+ LY M
Sbjct: 82 EGLPYAISVFKTIQ-EPNLLIWNTMFRGHALSSD-PVSALKLYVCMISLGLLPNSYTFPF 139
Query: 70 XXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
C A ++IHG+ ++ D + + LI Y + G L ++ VF K D
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 130 -----------------------------KDVVAWSSLISAYALHGEAKAALETFKEMEM 160
KDVV+W+++IS YA G K ALE FK+M
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
V+PD T + V+ AC+ +G + + D+G ++ + L+D+ S+ G L
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWID-DHGFGSNLKIVNALIDLYSKCGELE 318
Query: 221 EAYEVIRGMPVKVTAKAWGALLG 243
A + +P K +W L+G
Sbjct: 319 TACGLFERLPYK-DVISWNTLIG 340
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 8/313 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMD----VPPNESTFNPIIAALAAQNDGSFKAIALYRKMX 56
MIS Y + D A++LF M+ V N +T+N IIA QN +A+ L+RKM
Sbjct: 459 MISGYIKNGDE-GEAMDLFQRMEKDGKVQRNTATWNLIIAGYI-QNGKKDEALELFRKMQ 516
Query: 57 XXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLV 116
C N+ +++EIHG +R ++D + + L + Y + G +
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 117 NSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
S +F M KD++ W+SLI Y LHG AL F +M+ G+ P+ T ++ A
Sbjct: 577 YSRTIFLGMET--KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Query: 177 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
G D+ F + DY + + +H S +V + RA RL EA + I+ M ++
Sbjct: 635 HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Query: 237 AWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXX 296
W + L CR G++ +A A +EPEN A +++++YA
Sbjct: 695 IWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRR 754
Query: 297 XXGVKSTTGSSWV 309
+K G SW+
Sbjct: 755 DNLLKKPLGQSWI 767
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 15 ALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
A++L M+ + + T+ +I+ L N ++A+ ++RKM
Sbjct: 301 AMDLMQKMETFGITADVFTWTAMISGLI-HNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + +N E+H ++ +G+ L++ Y +CG L ++ VF +++ KD
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN--KD 417
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V W+S+I+ Y G A E F M+ A ++P+ IT+ ++ G +A+ F
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRG------MPVKVTAKAWGALLGAC 245
RM++D V+ ++ ++ ++ + G+ EA E+ R MP VT +LL AC
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTIL---SLLPAC 534
Query: 246 RN-FGELGLAEIAG 258
N G + EI G
Sbjct: 535 ANLLGAKMVREIHG 548
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 6/204 (2%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIA-LYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
N T++ +I A + +N ++ +A L+R M C N + K
Sbjct: 145 NLFTWSAMIGAYSREN--RWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IH I+ + ++ + ++ Y +CG L + F +MR+ +DV+AW+S++ AY +
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE--RDVIAWNSVLLAYCQN 260
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G+ + A+E KEME G+ P +T+ ++ + G D A+ +M+ +G+ A
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME-TFGITADVFT 319
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGM 229
++ ++ L G ++A ++ R M
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKM 343
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 74 CVNVAALNLIKEIHG-YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C++ +++L + +H +G+ + P + + L+ Y +CGC+ ++ VF MR+ +++
Sbjct: 91 CIDSGSIHLGRILHARFGLFTE--PDVFVETKLLSMYAKCGCIADARKVFDSMRE--RNL 146
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
WS++I AY+ + + F+ M GV PD F +L+ C++ G + +
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSV 206
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA-LLGACRNFGEL 251
+ + G+ + + ++ V ++ G L A + R M + AW + LL C+N
Sbjct: 207 VIK-LGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER-DVIAWNSVLLAYCQN---- 260
Query: 252 GLAEIAGRASAEVEPE 267
G E A E+E E
Sbjct: 261 GKHEEAVELVKEMEKE 276
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 132/263 (50%), Gaps = 3/263 (1%)
Query: 10 DNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXX 69
D L A+ LF + ++N ++ +A+A +R+M
Sbjct: 551 DALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE-EAVATFRQMKVEKFQPNAVTFVN 609
Query: 70 XXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
++AL + +H I+ +G+ L++ Y +CG + +S F ++ +
Sbjct: 610 IVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISN-- 667
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
K +V+W++++SAYA HG A A+ F M+ +KPD ++FL VL AC HAG ++
Sbjct: 668 KYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
F M + +EA +HY+C+VD+L +AG EA E++R M VK + WGALL + R
Sbjct: 728 FEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHC 787
Query: 250 ELGLAEIAGRASAEVEPENAANY 272
L L+ A ++EP N ++Y
Sbjct: 788 NLWLSNAALCQLVKLEPLNPSHY 810
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 39 AAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPH 98
A Q+D +AI+L+R M C VAA L K IH Y I+ DI+
Sbjct: 379 AGQHD---EAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE 435
Query: 99 PQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM 158
+ + +I Y +CG + F ++ KD VA+++L Y G+A A + +K M
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPI--KDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Query: 159 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
++ GV PD T +G+L+ C+ C + ++ + +G ++ L+++ ++
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK-HGFDSECHVAHALINMFTKCDA 552
Query: 219 LHEAYEVIRGMPVKVTAKAWGALL 242
L A + + + +W ++
Sbjct: 553 LAAAIVLFDKCGFEKSTVSWNIMM 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IH Y ++ + + + L+ Y +CG L + +F + D +DVV+WS++I++Y
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED--RDVVSWSAMIASYEQA 379
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL-----CYFTRMQRDYGVE 200
G+ A+ F++M +KP+ +T VL+ C AG A L CY + +E
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC--AGVAASRLGKSIHCYAIKAD----IE 433
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGAL 241
+ + + ++ + ++ GR A + +P+K A A+ AL
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNAL 473
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 81 NLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLIS 140
+LI E+ G+ +D+ +G+ L+E Y + LV++ VF KM KDVV W++++S
Sbjct: 124 DLIAEM---GLESDV----YIGTALVEMYCKARDLVSARQVFDKMHV--KDVVTWNTMVS 174
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 200
A +G + AAL F +M V D ++ ++ A S +D C + + +
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
A S S L+D+ L+ A V + K +WG ++ A
Sbjct: 235 AFS---SGLIDMYCNCADLYAAESVFEEVWRK-DESSWGTMMAA 274
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 121/217 (55%), Gaps = 17/217 (7%)
Query: 74 CVNVAALNLIKEIHGYGIR-----NDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C A L K HG IR NDI +G+ +++AY +CG + + F ++
Sbjct: 436 CSVSADLRTSKWAHGIAIRRSLAINDI----SVGTSIVDAYAKCGAIEMARRTFDQI--T 489
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 188
+K++++W+ +ISAYA++G AL F EM+ G P+ +T+L L AC+H G L
Sbjct: 490 EKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLM 549
Query: 189 YFTRM-QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP--VKVTAKAWGALLGAC 245
F M + D+ + S HYSC+VD+LSRAG + A E+I+ +P VK A AWGA+L C
Sbjct: 550 IFKSMVEEDH--KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC 607
Query: 246 RN-FGELGLAEIAGRASAEVEPENAANYVLLAKMYAS 281
RN F +L + E+EP ++ Y+L + +A+
Sbjct: 608 RNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAA 644
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
++IHGY IR+ + + ++ Y L ++ +F +M + +DV++WS +I +Y
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSE--RDVISWSVVIRSYV 201
Query: 144 LHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACS 178
E L+ FKEM A +PD +T VLKAC+
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 131/249 (52%), Gaps = 15/249 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRN---DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + +L+L H + +R D+ + + LIE Y +CG L + VF M+ +
Sbjct: 261 CAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK--R 318
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEM--EMAGVKPDGITFLGVLKACSHAGFADDALC 188
D+ +W+++I +A HG A+ A+ F M + V+P+ +TF+G+L AC+H GF +
Sbjct: 319 DLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 378
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
YF M RDY +E + +HY C+VD+++RAG + EA +++ MP+K A W +LL AC
Sbjct: 379 YFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKK 438
Query: 249 G-ELGLAEIAGRASAEVEPENAAN-------YVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
G + L+E R + +N ++ YVLL+++YAS G+
Sbjct: 439 GASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGI 498
Query: 301 KSTTGSSWV 309
+ G S +
Sbjct: 499 RKEPGCSSI 507
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 9/229 (3%)
Query: 19 FHLMDVPPNESTF--NPIIAALAAQNDGSFKAIALYRKMXXX-XXXXXXXXXXXXXXXCV 75
F + D N S+F N +I A A +A LYRKM C
Sbjct: 103 FRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACA 162
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
+ + K++H +++ + +GLI YG CGCL + VF +M ++ +V+W
Sbjct: 163 YIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP--ERSLVSW 220
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+S+I A GE +AL+ F+EM+ + +PDG T VL AC+ G + R
Sbjct: 221 NSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR 279
Query: 196 DYGVEASSDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
V+ + D + L+++ + G L A +V +GM + A +W A++
Sbjct: 280 KCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLA-SWNAMI 327
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 119/235 (50%), Gaps = 15/235 (6%)
Query: 86 IHGY----GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
+HGY G ++D +G+ L++ Y +CGCL N+ +VF M+ K+V W+S+ +
Sbjct: 242 VHGYIEKLGFTPEVDVF--IGTALVDMYSKCGCLNNAFSVFELMKV--KNVFTWTSMATG 297
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
AL+G M +G+KP+ ITF +L A H G ++ + F M+ +GV
Sbjct: 298 LALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTP 357
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRAS 261
+HY C+VD+L +AGR+ EAY+ I MP+K A +L AC +GE + E G+A
Sbjct: 358 VIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKAL 417
Query: 262 AEVEPENAA-------NYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E+E E+ +YV L+ + A G +K+ G S+V
Sbjct: 418 LEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 148/319 (46%), Gaps = 9/319 (2%)
Query: 1 MISLYAHSPDNLPTALELFH-LMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
++ +Y D + TA +F ++ N ++ +I A A QN +AI L+R
Sbjct: 172 LVDMYGKCND-VETARRVFDSMIGYGRNVVSWTSMITAYA-QNARGHEAIELFRSFNAAL 229
Query: 60 XX--XXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN 117
C ++ L K HG R + + + + L++ Y +CG L
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+ +F ++R V++++S+I A A HG +AA++ F EM + P+ +T LGVL AC
Sbjct: 290 AEKIFLRIRC--HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHAC 347
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
SH+G ++ L Y + M YGV S HY+C+VD+L R GR+ EAYE+ + + V A
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGA 407
Query: 238 --WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXX 295
WGALL A R G + + A + + + + Y+ L+ YA G
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEM 467
Query: 296 XXXGVKSTTGSSWVVYSES 314
G SW+ +S
Sbjct: 468 KRSGNVKERACSWIENKDS 486
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 73/183 (39%), Gaps = 53/183 (28%)
Query: 9 PDNLPTALELFHLMD----VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXX 64
P N AL +F M VPPNE TF + FKA
Sbjct: 111 PQN---ALSMFQKMHEDRPVPPNEYTFASV-----------FKA---------------- 140
Query: 65 XXXXXXXXXCVNVAALNLIKEIHGY----GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C +A + K IH G+R +I + S L++ YG+C + +
Sbjct: 141 ---------CSALAESRIGKNIHARLEISGLRRNI----VVSSSLVDMYGKCNDVETARR 187
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL--GVLKACS 178
VF M ++VV+W+S+I+AYA + A+E F+ A F+ V+ ACS
Sbjct: 188 VFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACS 247
Query: 179 HAG 181
G
Sbjct: 248 SLG 250
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 74 CVNV--AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C N + L K+IHGY + +I LG+ L++ YG+ G L + +F ++RD K
Sbjct: 231 CANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD--KK 288
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V AW+++ISA A +G K ALE F+ M+ + V P+GIT L +L AC+ + D + F+
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
+ +Y + +S+HY C+VD++ RAG L +A I+ +P + A GALLGAC+
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENT 408
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYA 280
L G+ ++P++ YV L+ A
Sbjct: 409 ELGNTVGKQLIGLQPQHCGQYVALSTFNA 437
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 129/254 (50%), Gaps = 5/254 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+N ++ + QN S +AI+L+ M C ++ +L K +H
Sbjct: 472 TWNSMLCGFS-QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHK 530
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
I + + + LI+ Y +CG L + VF M + S+I+AY +HG
Sbjct: 531 LIISGLKDLFT-DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS--SMINAYGMHGRIG 587
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
+A+ TF +M +G KP+ + F+ VL AC H+G ++ YF M + +GV +S+H++C
Sbjct: 588 SAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACF 646
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
+D+LSR+G L EAY I+ MP A WG+L+ CR ++ + + +++ ++
Sbjct: 647 IDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDT 706
Query: 270 ANYVLLAKMYASVG 283
Y LL+ +YA G
Sbjct: 707 GYYTLLSNIYAEEG 720
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 22/234 (9%)
Query: 23 DVPPNESTFNPI--------IAALAAQNDGSF--KAIALYRKMXXXXXXXXXXXXXXXXX 72
D+ +E F I A +++ N G F KA+ + +M
Sbjct: 252 DLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLS 311
Query: 73 XCVNVAALNLIKEIHGYGIRNDIDP-HPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + + K +HG+ +R ++DP + L L+E Y CG L + V + D ++
Sbjct: 312 SCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD--RN 369
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+VAW+SLIS YA G AL F++M +KPD T + AC +AG L
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG-----LVPLG 424
Query: 192 RMQRDYGVEAS-SDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ + + SD + + L+D+ S++G + A V + + + W ++L
Sbjct: 425 KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSML 477
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 11/235 (4%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
NL A ++F M P + + + +N KA+ +++ M
Sbjct: 151 NLSDAEKVFDGM--PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + L + + +HG R D L + L+ Y +CG L++S +F K+ K
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI--AKK 266
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC-- 188
+ V+W+++IS+Y ++ AL +F EM +G++P+ +T VL +C G +
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 189 -YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ R + D E+ S LV++ + G+L + V+R + + AW +L+
Sbjct: 327 GFAVRRELDPNYESLS---LALVELYAECGKLSDCETVLRVVSDR-NIVAWNSLI 377
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N +N +I+ L A +A+ L+R+M C N + L K+I
Sbjct: 369 NIVAWNSLIS-LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Query: 87 HGYGIRNDI-DPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
HG+ IR D+ D Q + LI+ Y + G + ++ VF++++ + VV W+S++ ++ +
Sbjct: 428 HGHVIRTDVSDEFVQ--NSLIDMYSKSGSVDSASTVFNQIKH--RSVVTWNSMLCGFSQN 483
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G + A+ F M + ++ + +TFL V++ACS G + ++ + +D
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD- 542
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGM 229
+ L+D+ ++ G L+ A V R M
Sbjct: 543 -TALIDMYAKCGDLNAAETVFRAM 565
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++HG I+ +D + + L+ YG+ G L ++ VF M +D+VAWS+L+S+
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV--RDLVAWSTLVSSCLE 179
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEA 201
+GE AL FK M GV+PD +T + V++ C+ G A TR D
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL---- 235
Query: 202 SSDHYSC--LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN--FGELGLAEIA 257
D C L+ + S+ G L + + + K A +W A++ + F E L +
Sbjct: 236 --DETLCNSLLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 258 GRASAEVEPENAANYVLLA 276
+ +EP Y +L+
Sbjct: 293 EMIKSGIEPNLVTLYSVLS 311
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 113/226 (50%), Gaps = 2/226 (0%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+ H + ++ ++ P + S L++ Y + G + S VF++M K+ W+S+ISAY+
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ--KNQFVWTSIISAYS 551
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
HG+ + + F +M V PD +TFL VL AC+ G D F M Y +E S
Sbjct: 552 SHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH 611
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+HYSC+VD+L RAGRL EA E++ +P ++LG+CR G + + + E
Sbjct: 612 EHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAME 671
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++PE + +YV + +YA V G SW+
Sbjct: 672 MKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N +++ L+ + F+A+ ++R M C + L L ++IHG
Sbjct: 242 SWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGL 301
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
I+ + ++G+ L+ Y +CG L +VF +M +++VV+W+++IS+
Sbjct: 302 CIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS--ERNVVSWTTMISS-----NKD 354
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKA 176
A+ F M GV P+ +TF+G++ A
Sbjct: 355 DAVSIFLNMRFDGVYPNEVTFVGLINA 381
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 116/225 (51%), Gaps = 4/225 (1%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
+N +IA A QN S AI + M C L++ +E+H
Sbjct: 242 WNTLIAGYA-QNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI 300
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
I+ + + + LI+ Y +CG L N+ +VF + + V +S+IS A+HG+ K
Sbjct: 301 NHRGIELNQFVSNALIDMYAKCGDLENATSVFESISV--RSVACCNSMISCLAIHGKGKE 358
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 210
ALE F ME +KPD ITF+ VL AC H GF + L F+ M+ V+ + H+ CL+
Sbjct: 359 ALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLI 417
Query: 211 DVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
+L R+G+L EAY +++ M VK GALLGAC+ + +AE
Sbjct: 418 HLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE 462
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
S ++ Y R G + + +F R +D+V W++LI+ YA +G + A++ F M+ G
Sbjct: 212 SLMMSGYFRIGDVHEARAIF--YRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEG 269
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
+PD +T +L AC+ +G D + + G+E + + L+D+ ++ G L A
Sbjct: 270 YEPDAVTVSSILSACAQSGRLDVGREVHSLINHR-GIELNQFVSNALIDMYAKCGDLENA 328
Query: 223 YEVIRGMPVKVTA 235
V + V+ A
Sbjct: 329 TSVFESISVRSVA 341
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
CV V + L K +H I+ + +GS LI YG+CGC+V++ VF +M +++V
Sbjct: 57 CV-VPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMP--ERNVA 113
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+++I Y +G+A A F+E+ V + +T++ ++K + A F RM
Sbjct: 114 TWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERM 170
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
+ + +S ++ V ++ +A + +P K A W ++ G++
Sbjct: 171 PFEL---KNVKAWSVMLGVYVNNRKMEDARKFFEDIPEK-NAFVWSLMMSGYFRIGDV 224
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 109/208 (52%), Gaps = 3/208 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C V +L + +H Y ++ + + L++ Y +CG L +S +F + KD+V
Sbjct: 328 CSQVGSLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGR--KDLV 384
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+++IS Y +HG + + F +M + ++PD TF +L A SH+G + +F+ M
Sbjct: 385 CWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVM 444
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
Y ++ S HY CL+D+L+RAGR+ EA ++I + W ALL C N L +
Sbjct: 445 INKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSV 504
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYAS 281
+IA ++ P++ L++ +A+
Sbjct: 505 GDIAANKILQLNPDSIGIQTLVSNFFAT 532
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 15/248 (6%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
AQ S KA+ YR+M ++ + + +HGY R + +
Sbjct: 193 AQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNV 252
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ + L++ Y + G + + VFS+M M K V+W SLIS +A +G A A E EM+
Sbjct: 253 VVETSLVDMYAKVGFIEVASRVFSRM--MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDAL---CYFTRMQRDYGVEASSDHYSCLVDVLSRA 216
G +PD +T +GVL ACS G CY + V A++ L+D+ S+
Sbjct: 311 SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATA-----LMDMYSKC 365
Query: 217 GRLHEAYEVIRGMPVKVTAKAWGALLGACRNF---GELGLAEIAGRASAEVEPENAANYV 273
G L + E+ + K W ++ +C G+ ++ + +EP++A
Sbjct: 366 GALSSSREIFEHVGRKDLV-CWNTMI-SCYGIHGNGQEVVSLFLKMTESNIEPDHATFAS 423
Query: 274 LLAKMYAS 281
LL+ + S
Sbjct: 424 LLSALSHS 431
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 21/182 (11%)
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+G +ND+ + S ++ Y +CG + + +F KM +DV+ W+++++ +A G++
Sbjct: 145 FGYKNDVF----VCSSVLNLYMKCGKMDEAEVLFGKM--AKRDVICWTTMVTGFAQAGKS 198
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKAC-----SHAGFADDALCYFTRMQRDYGVEASS 203
A+E ++EM+ G D + LG+L+A + G + Y T + + VE S
Sbjct: 199 LKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETS- 257
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
LVD+ ++ G + A V M K TA +WG+L+ F + GLA A A E
Sbjct: 258 -----LVDMYAKVGFIEVASRVFSRMMFK-TAVSWGSLISG---FAQNGLANKAFEAVVE 308
Query: 264 VE 265
++
Sbjct: 309 MQ 310
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 141/311 (45%), Gaps = 8/311 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MIS Y D + +A ELF LM ++ ++ +IA QN A+ L+ +M
Sbjct: 269 MISGYTKLGD-VQSAEELFRLMS-KKDKLVYDAMIACYT-QNGKPKDALKLFAQMLERNS 325
Query: 61 XXXXXXXXXXXXXCVN--VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
N + + + Y + I L + LI+ Y + G +
Sbjct: 326 YIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKA 385
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+FS + KD V++S++I ++G A A F M + P+ +TF G+L A S
Sbjct: 386 FKMFSNLNK--KDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYS 443
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW 238
H+G + F M +D+ +E S+DHY +VD+L RAGRL EAYE+I+ MP++ A W
Sbjct: 444 HSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVW 502
Query: 239 GALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXX 298
GALL A + EIA ++E + LA +Y+SVG
Sbjct: 503 GALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEK 562
Query: 299 GVKSTTGSSWV 309
+ T G SWV
Sbjct: 563 KLCKTLGCSWV 573
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+N L+ ++H I+ D + + L+E Y + G + + VF+K KD++
Sbjct: 346 MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDG--KDLIF 403
Query: 135 WSSLISAYALHGEAKAALETFKEMEM-AGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+++I A + A +L F ++ M +KPD +T +G+L AC +AGF ++ + F+ M
Sbjct: 404 WNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSM 463
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
++ +GV ++HY+C++++L R G ++EA ++ +P + ++ W +L A + G+ L
Sbjct: 464 EKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRL 523
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
AE + E EP+++ Y++L K+Y +KS GSS
Sbjct: 524 AETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSS 577
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 107/196 (54%), Gaps = 2/196 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ +L K++H + +++ P+L + +I +G C + ++ VF M +DKD+
Sbjct: 246 CANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHM--VDKDMD 303
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W ++ AY+ +G AL F+EM G+KP+ TFL V AC+ G ++A +F M
Sbjct: 304 SWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSM 363
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ ++G+ ++HY ++ VL + G L EA + IR +P + TA W A+ R G++ L
Sbjct: 364 KNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDL 423
Query: 254 AEIAGRASAEVEPENA 269
+ +V+P A
Sbjct: 424 EDYMEELMVDVDPSKA 439
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 3/201 (1%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
KE+H Y IR ++ ++ S LI+ Y +CG L + ++F+ + + K++V+++SLI
Sbjct: 328 KEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE--KNIVSFNSLILGLG 385
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
LHG A A E F E+ G+ PD ITF +L C H+G + F RM+ ++G+E +
Sbjct: 386 LHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQT 445
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+HY +V ++ AG+L EA+E + + + + GALL C LAE+ +
Sbjct: 446 EHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHK 505
Query: 264 VEPENAANY-VLLAKMYASVG 283
E + Y V+L+ +YA G
Sbjct: 506 NGEERRSVYKVMLSNVYARYG 526
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H + ++ ++D H +G L+ Y RC C+ ++C+VF+ + + D+VA SSLI+ Y+
Sbjct: 229 VHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE--PDLVACSSLITGYSRC 286
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKAC---SHAGFADDALCYFTRMQRDYGVEAS 202
G K AL F E+ M+G KPD + VL +C S + + Y R+ G+E
Sbjct: 287 GNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRL----GLELD 342
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
S L+D+ S+ G L A + G+P K +LG G G A A
Sbjct: 343 IKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG----LGLHGFASTAFEKFT 398
Query: 263 EV 264
E+
Sbjct: 399 EI 400
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 4/237 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++A L + H IR D + L++ YG+ G + +FS + D+
Sbjct: 513 CSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN--PDLK 570
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+S++ AY+ HG + AL F+++ G PD +T+L +L ACSH G + +M
Sbjct: 571 CWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM 630
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI-RGMPVKVTAKAWGALLGACRNFGELG 252
++ G++A HYSC+V+++S+AG + EA E+I + P A+ W LL AC N L
Sbjct: 631 -KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQ 689
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ A +++PE+ A ++LL+ +YA G G SW+
Sbjct: 690 IGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWI 746
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K +HG + + +G+ L+ Y + ++ VF M++ +DVV W+ +I ++
Sbjct: 422 KLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKE--RDVVLWTEMIVGHS 479
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
G ++ A++ F EM + DG + V+ ACS + R G +
Sbjct: 480 RLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRT-GFDCVM 538
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
LVD+ + G+ +E E I + K W ++LGA + + G+ E A
Sbjct: 539 SVCGALVDMYGKNGK-YETAETIFSLASNPDLKCWNSMLGA---YSQHGMVEKA 588
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
KEIHG+ +R I +L + ++ Y +CG + + +F ++D V ++++I+ A
Sbjct: 413 KEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS--SFERDTVMYNAMIAGCA 470
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
HG + + F++M G KPD ITF+ +L AC H G + YF M Y + +
Sbjct: 471 HHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPET 530
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGM-PVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
HY+C++D+ +A RL +A E++ G+ V+ A GA L AC L +
Sbjct: 531 GHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLL 590
Query: 263 EVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSW 308
+E N + Y+ +A YAS G ++ +G SW
Sbjct: 591 VIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSW 636
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 35/204 (17%)
Query: 10 DNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXX 69
+N+ A ELF + + T+N +++ A + +AI ++ +M
Sbjct: 68 NNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFT 127
Query: 70 XXXXCVNVAALNLI---KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFS--- 123
A L + +++HG ++ D S LI Y +CG CN+F+
Sbjct: 128 VTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSC 187
Query: 124 -----------------KMRDMDK------------DVVAWSSLISAYALHGEAKAALET 154
+ D+DK D ++W++LI+ YA +G + AL+
Sbjct: 188 VEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 155 FKEMEMAGVKPDGITFLGVLKACS 178
ME G+K D +F VL S
Sbjct: 248 AVSMEENGLKWDEHSFGAVLNVLS 271
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 10/269 (3%)
Query: 21 LMDVPPNES--TFNPIIAA-LAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNV 77
L D P+++ ++N +I+A L A N G +I+L+R+M C
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGV--SISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
A L + +H IR ++ + + LI+ YG+C + + +F + +K V W+
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK--VTWNV 321
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
+I A+ LHG + LE F+ M ++PD +TF+GVL C+ AG Y++ M ++
Sbjct: 322 MILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEF 381
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAKAWGALLGACRNFGELGLA 254
++ + H C+ ++ S AG EA E ++ +P V + W LL + R G L
Sbjct: 382 QIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLG 441
Query: 255 EIAGRASAEVEPENAANYVLLAKMYASVG 283
E ++ E +P N Y LL +Y+ G
Sbjct: 442 ESIAKSLIETDPLNYKYYHLLMNIYSVTG 470
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ ALNL K IHG+ IR+ + +++ Y +C C + VF + +D++
Sbjct: 506 CANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEA--ATRDLI 563
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+S+I +G +K E F +E GVKPD +TFLG+L+AC G + YF+ M
Sbjct: 564 LWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSM 623
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
Y + +HY C++++ + G LH+ E + MP + + AC+ +
Sbjct: 624 STKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRY 678
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ + + K+ HG+ R+ D + + + L++ YG+CG L ++ F +M ++ +D V
Sbjct: 405 CSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL-RDEV 463
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W++L++ A G ++ AL F+ M++ KP T +L C++ + +
Sbjct: 464 SWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFL 522
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACRN 247
RD G + +VD+ S+ A EV + + W +++ G CRN
Sbjct: 523 IRD-GYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRN 575
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 106 IEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKP 165
IEAYG+CGC+ ++ +F +M + D +W+++I+A A +G + F+ M GV+
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGG--SWNAVITACAQNGVSDEVFRMFRRMNRDGVRA 160
Query: 166 DGITFLGVLKACSHAGFADDALCYFTRMQRD-------YGVEASSDHYSCLVDVLSRAGR 218
+F GVLK+C L R+ R YG + D + +VDV +
Sbjct: 161 TETSFAGVLKSC--------GLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV 212
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
+ +A V + V + +W ++ R + E+G + A
Sbjct: 213 MSDARRVFDEI-VNPSDVSWNVIV---RRYLEMGFNDEA 247
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 24 VPPNESTFNPIIAALAAQ--NDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALN 81
V P++ ++N I+ ND +A+ ++ KM C AL
Sbjct: 224 VNPSDVSWNVIVRRYLEMGFND---EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALE 280
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
+ K IH ++ + + + + + Y +C L ++ VF + R KD+ +W+S +S
Sbjct: 281 VGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRS--KDLKSWTSAMSG 338
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
YA+ G + A E F M + +++ +L HA D+AL + T M+++
Sbjct: 339 YAMSGLTREARELFDLMPERNI----VSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 15 ALELFHLMDVPPNES-TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXX 73
A ELF ++P + ++N +I A AQN S + ++R+M
Sbjct: 115 ARELFE--EMPERDGGSWNAVITA-CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKS 171
Query: 74 CVNVAALNLIKEIH----GYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
C + L L++++H YG ++D L + +++ YG+C + ++ VF ++ ++
Sbjct: 172 CGLILDLRLLRQLHCAVVKYGYSGNVD----LETSIVDVYGKCRVMSDARRVFDEI--VN 225
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
V+W+ ++ Y G A+ F +M V+P T V+ ACS +
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRS 276
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 4/229 (1%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
+IH Y ++ LG+ LI Y +C ++ +F+ MR+ DV++W+SLIS Y L
Sbjct: 542 QIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMRE--HDVISWNSLISCYIL 599
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC--YFTRMQRDYGVEAS 202
AL + M +KPD IT V+ A + + C F M+ Y +E +
Sbjct: 600 QRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPT 659
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
++HY+ V VL G L EA + I MPV+ ALL +CR +A+ +
Sbjct: 660 TEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLIL 719
Query: 263 EVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVY 311
+PE + Y+L + +Y++ G G + SW+++
Sbjct: 720 STKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIH 768
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ AL L KE+HG+ ++ + + P + + +I+ YG+CG L ++ F + K +
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAV--AVKGSL 586
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+++I AY + + A+ F++M G P+ TF VL CS AGF D+A +F M
Sbjct: 587 TWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
R Y ++ S +HYS ++++L+R GR+ EA +
Sbjct: 647 LRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 34 IIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV-NVAALNLIKEIHGYGIR 92
+IA LA N ++A+ L+R M + +V AL L KE+H + ++
Sbjct: 286 MIAGLA-HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK 344
Query: 93 N-DIDPHPQLGSGLIEAYGRCGCLVNSCNVF--SKMRDMDKDVVAWSSLISAYALHGEAK 149
+ + P + SGLI+ Y +CG + + VF SK R+ ++W++L+S YA +G
Sbjct: 345 SKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRN----AISWTALMSGYAANGRFD 400
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACS 178
AL + M+ G +PD +T VL C+
Sbjct: 401 QALRSIVWMQQEGFRPDVVTIATVLPVCA 429
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + A+ KEIH Y ++N P+ L + L+ Y +CG +F ++ ++V
Sbjct: 428 CAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQ--RNVK 485
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
AW+++I Y + + +A +E F+ M ++ +PD +T VL CS
Sbjct: 486 AWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 3/184 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A L+R+M + +L++ + +H Y +N LG+ LI
Sbjct: 234 EAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALI 293
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM-AGVKP 165
+ Y +CG L ++ VF M+ K + W+S+I++ +HG + AL F+EME A V+P
Sbjct: 294 DMYSKCGSLQDARKVFDVMQG--KSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEP 351
Query: 166 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
D ITF+GVL AC++ G D L YFTRM + YG+ +H +C++ +L +A + +A +
Sbjct: 352 DAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNL 411
Query: 226 IRGM 229
+ M
Sbjct: 412 VESM 415
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H I++ + LI+AY + G S VF ++ ++ +S+I+ YA +
Sbjct: 441 VHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDT--PNIFCLTSIINGYARN 498
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G ++ +EM+ + PD +T L VL CSH+G ++ F ++ YG+
Sbjct: 499 GMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKL 558
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV- 264
Y+C+VD+L RAG + +A ++ AW +LL +CR + E GR +AEV
Sbjct: 559 YACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCR----IHRNETIGRRAAEVL 614
Query: 265 ---EPENAANYVLLAKMYASVG 283
EPEN A Y+ ++K Y +G
Sbjct: 615 MNLEPENFAVYIQVSKFYFEIG 636
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 17/247 (6%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
NL +A E F M V + T+N +I+ ++ S +AI LY +M
Sbjct: 61 NLLSAHEAFDEMSVR-DVVTYNLLISG-NSRYGCSLRAIELYAEMVSCGLRESASTFPSV 118
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN-SCNVFSKMRDMD 129
C + ++H I + + S L+ Y C LV+ + +F +M +D
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDEM--LD 175
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
+++ + L+ + GE+K E + ME+ GV +G+T+ +++ CSH D L Y
Sbjct: 176 RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH-----DRLVY 230
Query: 190 FTRMQRDYGVEAS---SDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ V++ S+ + + LVD S G L + +P K +W +++
Sbjct: 231 EGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEK-DVISWNSIVSV 289
Query: 245 CRNFGEL 251
C ++G +
Sbjct: 290 CADYGSV 296
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
L++ Y CG L S F+ + + KDV++W+S++S A +G +L+ F +M+ G +
Sbjct: 255 LVDYYSACGDLSGSMRSFNAVPE--KDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKR 312
Query: 165 PDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEASSDHY-SCLVDVLSRAGRLH 220
P F+ L CS CY +M G + SS H S L+D+ + +
Sbjct: 313 PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKM----GFDVSSLHVQSALIDMYGKCNGIE 368
Query: 221 EAYEVIRGMP 230
+ + + +P
Sbjct: 369 NSALLYQSLP 378
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 131/294 (44%), Gaps = 8/294 (2%)
Query: 21 LMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAA 79
L D+P PN S++N I+ ++ S +A + KM +A
Sbjct: 277 LSDMPNPNSSSWNTILTGYV-NSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAV 335
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
+ IH + +D + S LI+ Y +CG L ++ +F M K+++ W+ +I
Sbjct: 336 VPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPR--KNLIVWNEMI 393
Query: 140 SAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADDA-LCYFTRMQRDY 197
S YA +G++ A++ F +++ +KPD TFL +L CSH + L YF M +Y
Sbjct: 394 SGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEY 453
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
++ S +H L+ + + G + +A +VI+ AW ALLGAC +L A+
Sbjct: 454 RIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTV 513
Query: 258 GRASAEVEPENAAN--YVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E+ + Y++++ +YA GV GSSW+
Sbjct: 514 AAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N ++L +++HGY ++ + +L + L+ Y L ++ VF +M D DV++W
Sbjct: 67 NYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPD--PDVISW 124
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+SL+S Y G + + F E+ + V P+ +F L AC+ + C +++ +
Sbjct: 125 NSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK 184
Query: 196 DYGVEASSDHY-SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
G+E + +CL+D+ + G + +A V + M K T +W A++ +C G+L L
Sbjct: 185 -LGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV-SWNAIVASCSRNGKLEL 241
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L +++HG I++ + + L+ Y +CG L ++ +F+ M +D++ W+ LI
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEI--RDLITWTCLI 503
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
YA +G +DA YF M+ YG+
Sbjct: 504 VGYAKNG-----------------------------------LLEDAQRYFDSMRTVYGI 528
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGR 259
+HY+C++D+ R+G + +++ M V+ A W A+L A R G + E A +
Sbjct: 529 TPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAK 588
Query: 260 ASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E+EP NA YV L+ MY++ G + G SWV
Sbjct: 589 TLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWV 638
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 6/254 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI Y++S L A +LF V N ++N +I+ ++ +A L+ +M
Sbjct: 65 MIVAYSNSR-RLSDAEKLFRSNPVK-NTISWNALISGYC-KSGSKVEAFNLFWEMQSDGI 121
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++ L ++IHG+ I+ D + +GL+ Y +C + +
Sbjct: 122 KPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEY 181
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F M + +K+ V W+S+++ Y+ +G A A+E F+++ G + + TF VL AC+
Sbjct: 182 LFETM-EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASV 240
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
+ + + G + + S L+D+ ++ + A ++ GM V +W +
Sbjct: 241 SACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVV-SWNS 298
Query: 241 LLGACRNFGELGLA 254
++ C G +G A
Sbjct: 299 MIVGCVRQGLIGEA 312
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 13/246 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++++YA + A LF M+ N T+ ++ + QN +FKAI +R +
Sbjct: 166 LLAMYAQCK-RISEAEYLFETMEGEKNNVTWTSMLTGYS-QNGFAFKAIECFRDLRREGN 223
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C +V+A + ++H +++ + + S LI+ Y +C + ++
Sbjct: 224 QSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARA 283
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK----A 176
+ M ++D DVV+W+S+I G AL F M +K D T +L +
Sbjct: 284 LLEGM-EVD-DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALS 341
Query: 177 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
+ A A C + G + LVD+ ++ G + A +V GM ++
Sbjct: 342 RTEMKIASSAHCLIVKT----GYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVI 396
Query: 237 AWGALL 242
+W AL+
Sbjct: 397 SWTALV 402
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ + L++ Y + G + ++ VF M ++KDV++W++L++ +G AL+ F M +
Sbjct: 366 VNNALVDMYAKRGIMDSALKVFEGM--IEKDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY---GVEASSDHYSCLVDVLSRAG 217
G+ PD I VL A + + + ++ +Y G +S + LV + ++ G
Sbjct: 424 GGITPDKIVTASVLSASAELTLLE----FGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCG 479
Query: 218 RLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGR 259
L +A + M ++ ++G +N GL E A R
Sbjct: 480 SLEDANVIFNSMEIRDLITWTCLIVGYAKN----GLLEDAQR 517
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSG--LIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C L K +HG I + H L S L+E Y CG + +VF KM + K+
Sbjct: 264 CGEAEGLQEAKTVHG-KISASV-SHLDLSSNHVLLEMYSNCGLANEAASVFEKMSE--KN 319
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+ W +I +A +G + A++ F + G PDG F G+ AC G D+ L +F
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFE 379
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M RDYG+ S + Y LV++ + G L EA E + MP++ W L+ R G L
Sbjct: 380 SMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNL 439
Query: 252 GLAEIAGRASAEVEP 266
L + ++P
Sbjct: 440 ELGDYCAEVVEFLDP 454
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N T+ IIAA A + G +AI+L+R M C +V AL L KE+
Sbjct: 349 NTVTWTSIIAAHAREGFGE-EAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H I+N I+ + +GS L+ Y +CG ++ NV ++ +DVV+W+++IS + G
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS--RDVVSWTAMISGCSSLG 465
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
AL+ KEM GV+P+ T+ LKAC+++ ++L + R A +H
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANS----ESLL----IGRSIHSIAKKNHA 517
Query: 207 -------SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
S L+ + ++ G + EA+ V MP K ++G RN
Sbjct: 518 LSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARN 565
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N +L + + IH +N + +GS LI Y +CG + + VF M + K++V
Sbjct: 496 CANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE--KNLV 553
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+W ++I YA +G + AL+ ME G + D F +L C
Sbjct: 554 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C A L +++HG ++ + + + S L+ Y +CG L ++ F M + KDV+
Sbjct: 194 CSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEE--KDVI 250
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+++ISA + G A+ F M P+ T +LKACS ++ F R
Sbjct: 251 SWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACS-----EEKALRFGRQ 305
Query: 194 QRDYGVEA--SSDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
V+ +D + + L+D+ ++ G + + +V GM + T W +++ A
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTV-TWTSIIAA 359
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 74 CVNVAALNLIKEIHGY-----GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C + AL K +H + GI +DI + + +IE Y CG + ++ VF+ M +
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGI-SDISAY----NSIIEMYSGCGSVEDALTVFNSMPE- 244
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 188
+++ W +I +A +G+ + A++TF + G KPDG F + AC G ++ L
Sbjct: 245 -RNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLL 303
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
+F M ++YG+ +HY LV +L+ G L EA + M V W L+ R
Sbjct: 304 HFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNV--DLWETLMNLSRVH 361
Query: 249 GELGLAE 255
G+L L +
Sbjct: 362 GDLILGD 368
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
+IE Y C ++ NVF++M + + W ++I A +GE + A++ F G K
Sbjct: 149 VIEMYSGCRSTDDALNVFNEMPKRNSE--TWGTMIRCLAKNGEGERAIDMFTRFIEEGNK 206
Query: 165 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYE 224
PD F V AC G ++ L +F M RDYG+ S + Y ++++L+ G L EA +
Sbjct: 207 PDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 225 VIRGMPVKVTAKAWGALLGAC--RNFGELG--LAEIAGRASA 262
+ M V+ + + W L+ C + + ELG AE+ + A
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDA 308
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ +IE Y C + ++ VF +M + + + ++ + +G + A++ F + G
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLC--VMMRCFVNNGYGEEAIDLFTRFKEEG 215
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
KP+G F V C+ G + F M R+YG+ S +HY + +L+ +G L EA
Sbjct: 216 NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEA 275
Query: 223 YEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAA 270
+ MP++ + W L+ R G++ E+ R + VE +A
Sbjct: 276 LNFVERMPMEPSVDVWETLMNLSRVHGDV---ELGDRCAELVEKLDAT 320
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXX-X 59
MIS Y D + +A +LF M N ++N +IA A + AI + M
Sbjct: 337 MISGYTRIGD-MSSARQLFDTMP-KRNVVSWNSLIAGYAHNGQAAL-AIEFFEDMIDYGD 393
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C ++A L L I Y +N I + LI Y R G L +
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAK 453
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF +M++ +DVV++++L +A+A +G+ L +M+ G++PD +T+ VL AC+
Sbjct: 454 RVFDEMKE--RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNR 511
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCL 209
AG + F ++ +DHY+C+
Sbjct: 512 AGLLKEGQRIFKSIR-----NPLADHYACM 536
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
+I + + L N+ F +M + K VV+W++++S YA +G + AL F +M GV+
Sbjct: 204 MITGFAKVKDLENARKYFDRMPE--KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 165 PDGITFLGVLKACSHAGFADDALCY-FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAY 223
P+ T++ V+ ACS AD +L ++ + V + + L+D+ ++ + A
Sbjct: 262 PNETTWVIVISACSFR--ADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSAR 319
Query: 224 EVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
+ + + W A++ G++ A
Sbjct: 320 RIFNELGTQRNLVTWNAMISGYTRIGDMSSAR 351
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 13/187 (6%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWS 136
++KE+ G++ P Q + +I+ +G+ CL ++ F +M ++ D V W+
Sbjct: 428 TFQVLKEMKSIGVK----PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
+LI + HG A E F+ ME G P T+ ++ + DD +M +
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM-KS 542
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAKAWGALLGACRNFGELGL 253
G+ + ++ LVDV ++GR ++A E + M +K ++ + AL+ A + + GL
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA---YAQRGL 599
Query: 254 AEIAGRA 260
+E A A
Sbjct: 600 SEQAVNA 606
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 92/232 (39%), Gaps = 17/232 (7%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV------NVAALNLI 83
T+N +I A A ND KA+ L KM +V L L
Sbjct: 199 TYNALIGACARNNDIE-KALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVF--SKMRDMDKDVVAWSSLISA 141
KEI R+ ++ QL + +I + + G + + ++ + S+ISA
Sbjct: 258 KEIE----RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
A G A F+E+ +G+KP + +LK G DA + M++ GV
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR-GVSP 372
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAKAWGALLGACRNFGE 250
YS L+D AGR A V++ M V+ + + LL R+ GE
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 16/161 (9%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK-----D 131
+ LN +KE+ IDP + LI+ R G L +C F + +M K D
Sbjct: 309 LTTLNHMKEV-------GIDPSVLHYTTLIDGLSRAGNL-EACKYF--LDEMVKAGCRPD 358
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
VV ++ +I+ Y + GE A E F+EM + G P+ T+ +++ AG +A C+
Sbjct: 359 VVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA-CWLL 417
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
+ G + YS LV L +AG+L EA +VIR M K
Sbjct: 418 KEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMR--DMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
S +I+ + + G + N+F +MR + D V++++L+S Y G ++ AL+ +EM
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G+K D +T+ +L G D+ FT M+R++ V + YS L+D S+ G
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSKGGLYK 531
Query: 221 EAYEVIRGMP---VKVTAKAWGALLGA-CRN 247
EA E+ R ++ + AL+ A C+N
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWS 136
AL++++E+ GI+ D+ + + L+ YG+ G VF++M+ + +++ +S
Sbjct: 463 ALDILREMASVGIKKDVVTY----NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYS 518
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
+LI Y+ G K A+E F+E + AG++ D + + ++ A G A+ M ++
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN-----FGEL 251
G+ + Y+ ++D R+ + + + G + ++ A AL N FG+L
Sbjct: 579 -GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQL 637
Query: 252 GLAEIAGRASAEVE 265
E R + + E
Sbjct: 638 -TTESNNRTTKDCE 650
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLISAYALHGEAKAALETFKE 157
+L S +I GR G + + +F V A+S+LISAY G + A+ F
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 158 MEMAGVKPDGITFLGVLKACSHAGFADDALC-YFTRMQRDYGVEASSDHYSCLVDVLSRA 216
M+ G++P+ +T+ V+ AC G + +F MQR+ GV+ ++ L+ V SR
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRG 352
Query: 217 GRLHEAYEVIRGMPVKVTAK---AWGALLGACRNFGELGLA-EIAGRASAEVEPENAANY 272
G A + M + + ++ LL A G++ LA EI + + N +Y
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 273 VLLAKMYASVG 283
+ +A G
Sbjct: 413 STVIDGFAKAG 423
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAW 135
AA L +E+ G+ D + + +I+ +G+ G L ++ F +M+DM + DV+ +
Sbjct: 280 AARGLFEEMKFRGLVPDTVTY----NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
++LI+ + G+ LE ++EM+ G+KP+ +++ ++ A G A+ ++ M+R
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
G+ + Y+ L+D + G L +A+ +
Sbjct: 396 -VGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 92 RNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM-----DKDVVAWSSLISAYALHG 146
R + P + +GL+ + + G + +V +DM V ++ +I G
Sbjct: 220 RFRVFPKTRSCNGLLHRFAKLG---KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEG 276
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
+ +AA F+EM+ G+ PD +T+ ++ G DD +C+F M +D E Y
Sbjct: 277 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITY 335
Query: 207 SCLVDVLSRAGRLH---EAYEVIRGMPVKVTAKAWGALLGA 244
+ L++ + G+L E Y ++G +K ++ L+ A
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWSSLIS 140
+ +I+ R+DI P + LI+AYGR + +VF +M D + A++ L+
Sbjct: 305 VSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLD 364
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 200
A+A+ G + A FK M + PD ++ +L A +A + A +F R++ D G E
Sbjct: 365 AFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD-GFE 423
Query: 201 ASSDHYSCLVDVLSRAG---RLHEAYEVIRGMPVKVTAKAWGALL---GACRNFGELGLA 254
+ Y L+ ++A ++ E YE +R +K ++ G C+NFG L
Sbjct: 424 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS-ALG 482
Query: 255 EIAGRASAEVEPENAANYVLLA 276
S V P+ A VLL+
Sbjct: 483 WYKEMESCGVPPDQKAKNVLLS 504
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 10/196 (5%)
Query: 92 RNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLISAYALHGEAK 149
++ + P ++ +I Y + G + VFS M + + + V ++SL+S K
Sbjct: 247 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYK 303
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
+ + +M+ + ++PD +++ ++KA A ++AL F M D GV + Y+ L
Sbjct: 304 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML-DAGVRPTHKAYNIL 362
Query: 210 VDVLSRAGRLHEAYEVIRGMPV-KVTAKAWG--ALLGACRNFGEL-GLAEIAGRASAEVE 265
+D + +G + +A V + M ++ W +L A N ++ G + R +
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422
Query: 266 PENAANYVLLAKMYAS 281
N Y L K YA
Sbjct: 423 EPNIVTYGTLIKGYAK 438
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWSSLIS 140
+ +I+ R+DI P + LI+AYGR + +VF +M D + A++ L+
Sbjct: 298 VSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLD 357
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 200
A+A+ G + A FK M + PD ++ +L A +A + A +F R++ D G E
Sbjct: 358 AFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD-GFE 416
Query: 201 ASSDHYSCLVDVLSRAG---RLHEAYEVIRGMPVKVTAKAWGALL---GACRNFGELGLA 254
+ Y L+ ++A ++ E YE +R +K ++ G C+NFG L
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS-ALG 475
Query: 255 EIAGRASAEVEPENAANYVLLA 276
S V P+ A VLL+
Sbjct: 476 WYKEMESCGVPPDQKAKNVLLS 497
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 92 RNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLISAYALHGEAK 149
++ + P ++ +I Y + G + VFS M + + + V ++SL+S K
Sbjct: 240 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYK 296
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
+ + +M+ + ++PD +++ ++KA A ++AL F M D GV + Y+ L
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML-DAGVRPTHKAYNIL 355
Query: 210 VDVLSRAGRLHEAYEVIRGMPV-KVTAKAWG--ALLGACRNFGEL-GLAEIAGRASAEVE 265
+D + +G + +A V + M ++ W +L A N ++ G + R +
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Query: 266 PENAANYVLLAKMYA 280
N Y L K YA
Sbjct: 416 EPNIVTYGTLIKGYA 430
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMR--DMDKDVVAW 135
+A+++ +E+ G + P+ + I+ YG G +F ++ + D+V W
Sbjct: 402 SAMSIFEEMRNAGCK----PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTW 457
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
++L++ + +G FKEM+ AG P+ TF ++ A S G + A+ + RM
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML- 516
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAKAWGALLGACRNFGELG 252
D GV Y+ ++ L+R G ++ +V+ M K + +LL A N E+G
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG 576
Query: 253 L 253
L
Sbjct: 577 L 577
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ L++ YG+ + V ++M +V ++SLISAYA G A+E +M
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G KPD T+ +L AG + A+ F M R+ G + + ++ + + G+
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 221 EAYEVIRGMPV---KVTAKAWGALLGACRNFGELGL-AEIAG 258
E ++ + V W LL FG+ G+ +E++G
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAV---FGQNGMDSEVSG 475
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+I G+ G + ++ N+F+ +++ DV +++SLISA+A G + A+ FK+ME G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
KP IT+ +L G + + + G+ + Y+ L+ R EA
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 223 YEVIRGM 229
+V M
Sbjct: 299 AQVFEEM 305
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 81 NLIKEIHGYGIRND-----IDPHPQLGS-GLIEAYGRCGCLVNS----------CNVFSK 124
+L+ E++ + D +D P L + G+ + C L+ S C F
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 125 M-RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 183
+ + + DV +++ I+A+ G+ + A++ F +ME AGV P+ +TF V+ G
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 184 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
D+A + +M + G+E + YS LV L+RA R+ +AY V++ M K
Sbjct: 312 DEAFMFKEKMV-ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 126 RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 185
+++ + V ++ LI AY G ALE ++M+ G+ P+ T+ ++K S ++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 186 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM------PVKVT 234
A F M+ + G+E + HY+ L+D + G++ + ++R M P K+T
Sbjct: 699 AKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 81 NLIKEIHGYGIRND-----IDPHPQLGS-GLIEAYGRCGCLVNS----------CNVFSK 124
+L+ E++ + D +D P L + G+ + C L+ S C F
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 125 M-RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 183
+ + + DV +++ I+A+ G+ + A++ F +ME AGV P+ +TF V+ G
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 184 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
D+A + +M + G+E + YS LV L+RA R+ +AY V++ M K
Sbjct: 312 DEAFMFKEKMV-ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 126 RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 185
+++ + V ++ LI AY G ALE ++M+ G+ P+ T+ ++K S ++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 186 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM------PVKVT 234
A F M+ + G+E + HY+ L+D + G++ + ++R M P K+T
Sbjct: 699 AKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V++++++I Y E E EME G P+ IT+ ++ + + ++AL T
Sbjct: 259 VISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVAT 318
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR-GMP 230
RM+R G + S Y+CL+ L+RAGRL EA V R MP
Sbjct: 319 RMKRS-GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMP 357
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V++++++I Y E E EME G P+ IT+ ++ + + ++AL T
Sbjct: 259 VISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVAT 318
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR-GMP 230
RM+R G + S Y+CL+ L+RAGRL EA V R MP
Sbjct: 319 RMKRS-GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMP 357
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVA 134
+ A+ ++ +IH G+ D + + + A G+ + + ++F KM+ D+
Sbjct: 424 IEAIEMLSKIHEKGVVTDT----MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFT 479
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
++ LI+++ GE A+ F+E+E + KPD I++ ++ G D+A F MQ
Sbjct: 480 YNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ 539
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
+ G+ YS L++ + R+ AY + M VK
Sbjct: 540 -EKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK 576
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+I RC V + +V KM + DVV SSLI+ + A++ +ME G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
+PD + + ++ G +DA+ F RM+RD GV A + Y+ LV L +GR +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 223 YEVIRGMPVK 232
++R M ++
Sbjct: 229 ARLMRDMVMR 238
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLISAYALHGEA 148
+ DI P+ + +I+ + + G + ++ +M R +D DV ++SLI+ +HG
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM-QRDYGVEASSDHYS 207
A + M G PD +T+ ++ + D+ F M QR G+ + Y+
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR--GLVGDTITYN 353
Query: 208 CLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACRNFG-ELGLAEIAGRASAEVE 265
++ +AGR A E+ M + + + LL G C N+ E L +E+E
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 413
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 6/186 (3%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDK-DVVAWSSLISAYALHGEAKAALETFKEMEMA 161
S I+AYG G L + VF ++++K V+ ++ +I AY + + A E F+ M
Sbjct: 475 SANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSY 534
Query: 162 GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 221
GV PD T+ +++ + A CY +M R+ G + Y ++ + G+L+
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKM-RETGYVSDCIPYCAVISSFVKLGQLNM 593
Query: 222 AYEVIRGM---PVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE-PENAANYVLLAK 277
A EV + M ++ +G L+ A + G + A A E P N+ Y L K
Sbjct: 594 AEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIK 653
Query: 278 MYASVG 283
+Y VG
Sbjct: 654 LYTKVG 659
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN----------SCNVFSKMRDM- 128
LN+I ++ + + ++ H Q+ G+ C L+N + + KM +
Sbjct: 79 LNVIAKMKKFDVVINLCDHLQI-MGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 129 -DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 187
+ D+V ++SLI+ + L + A+ +M G+KPD + + ++ + G + AL
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM---PVKVTAKAWGALLGA 244
F +M+ +YG+ Y+ LV+ L +GR +A ++RGM +K + AL+ A
Sbjct: 198 SLFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 245 CRNFGELGLAE 255
G+ AE
Sbjct: 257 FVKEGKFLDAE 267
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 41/202 (20%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSG-------------------------------LIE 107
AL+L ++ YGIR D+ + L +G LI+
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 108 AYGRCGCLVNSCNVFSKMRDMD--KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKP 165
A+ + G +++ ++++M M ++ ++SLI+ + + G A + F ME G P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 166 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
D + + ++ DDA+ F M + G+ ++ Y+ L+ + G+ + A EV
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 226 I-----RGMPVKVTAKAWGALL 242
RG+P + + + LL
Sbjct: 375 FSHMVSRGVPPNI--RTYNVLL 394
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAWSSLISAYALHGEA 148
+R+ P+ + LI +YGR L + NVF++M++ D V + +LI +A G
Sbjct: 391 VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
A++ ++ M+ G+ PD T+ ++ AG A F M D G + Y+
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNI 509
Query: 209 LVDVLSRAGRLHEAYEVIRGM------PVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
++D+ ++A A ++ R M P KVT +LG C G E A
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC------GYLEEAEAVFT 563
Query: 263 EVEPEN----AANYVLLAKMYASVG 283
E++ +N Y LL ++ G
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAG 588
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 7/153 (4%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAWS 136
A+++ + + G+ D + S +I G+ G L + +F +M D ++V ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTY----SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
++ +A + AL+ +++M+ AG +PD +T+ V++ H G+ ++A FT MQ+
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
+ Y LVD+ +AG + +A++ + M
Sbjct: 569 NWI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAWSSLISAYALHGEA 148
+R+ P+ + LI +YGR L + NVF++M++ D V + +LI +A G
Sbjct: 391 VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
A++ ++ M+ G+ PD T+ ++ AG A F M D G + Y+
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNI 509
Query: 209 LVDVLSRAGRLHEAYEVIRGM------PVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
++D+ ++A A ++ R M P KVT +LG C G E A
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC------GYLEEAEAVFT 563
Query: 263 EVEPEN----AANYVLLAKMYASVG 283
E++ +N Y LL ++ G
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAG 588
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 7/153 (4%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAWS 136
A+++ + + G+ D + S +I G+ G L + +F +M D ++V ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTY----SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
++ +A + AL+ +++M+ AG +PD +T+ V++ H G+ ++A FT MQ+
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
+ Y LVD+ +AG + +A++ + M
Sbjct: 569 NWI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAWSSLISAYALHGEA 148
+R+ P+ + LI +YGR L + NVF++M++ D V + +LI +A G
Sbjct: 391 VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
A++ ++ M+ G+ PD T+ ++ AG A F M D G + Y+
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNI 509
Query: 209 LVDVLSRAGRLHEAYEVIRGM------PVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
++D+ ++A A ++ R M P KVT +LG C G E A
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC------GYLEEAEAVFT 563
Query: 263 EVEPEN----AANYVLLAKMYASVG 283
E++ +N Y LL ++ G
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAG 588
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 7/153 (4%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAWS 136
A+++ + + G+ D + S +I G+ G L + +F +M D ++V ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTY----SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
++ +A + AL+ +++M+ AG +PD +T+ V++ H G+ ++A FT MQ+
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
+ Y LVD+ +AG + +A++ + M
Sbjct: 569 NWI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 15/246 (6%)
Query: 15 ALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
A++LF M P T+N I+ K + + +M
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD-- 129
C L KE +P + L++ +G+ G + +V +M +
Sbjct: 289 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
D V ++ L++AY G +K A + M GV P+ IT+ V+ A AG D+AL
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM------PVKVTAKAWGALLG 243
F M ++ G ++ Y+ ++ +L + R +E +++ M P + T W +L
Sbjct: 409 FYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRAT---WNTMLA 464
Query: 244 ACRNFG 249
C N G
Sbjct: 465 LCGNKG 470
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 7/216 (3%)
Query: 12 LPTALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXX 68
L AL+ FH M + PN TF +I D A++LY++M
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEV-AVSLYKEMRRVRMSLNVVTYT 237
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--R 126
+ +E++ + + ++P+ + + +I+ + + G N+ +KM +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 127 DMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 186
M D+ A+ +IS +G+ K A E ++ME + + PD + F ++ A +G A
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 187 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
+ + ++ + G E S ++D +++ G+LHEA
Sbjct: 358 VNMYHKLI-ERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWSSLIS 140
+K H R+ + P+ + LI+ Y + G L + +++ +MR M +VV +++LI
Sbjct: 183 LKSFHSMK-RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 200
+ GE + A E + M V+P+ + + ++ G +D+A+ + +M + G+
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML-NQGMR 300
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
Y ++ L G+L EA E++ M
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDM 329
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ LI +YG G S +F M+ M V+ ++SL+S G A + F EM
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 161 A-GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
GV PD TF ++ D+A F M+ Y Y+ ++D L RAG++
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMEL-YHCNPDVVTYNTIIDGLCRAGKV 260
Query: 220 HEAYEVIRGMPVKVT 234
A+ V+ GM K T
Sbjct: 261 KIAHNVLSGMLKKAT 275
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 94 DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWSSLISAYALHGEAKAA 151
D P S LI +Y + G ++ +F +M+D M +++L+ Y G+ + A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 152 LETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVD 211
L+ F+EM+ AG P T+ ++K AG D+A ++ M RD G+ + L++
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMN 346
Query: 212 VLSRAGRLHEAYEVIRGM 229
+L + GR+ E V M
Sbjct: 347 ILGKVGRVEELTNVFSEM 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 76/140 (54%), Gaps = 13/140 (9%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK-----DVV 133
A++L E+ G D+ + L SG+++A ++N N S +R M++ D+
Sbjct: 498 AVDLFNEMKNQGSGPDVYAYNALMSGMVKA-----GMINEAN--SLLRKMEENGCRADIN 550
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+ + +++ +A G + A+E F+ ++ +G+KPDG+T+ +L +HAG ++A R
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEA-ARMMRE 609
Query: 194 QRDYGVEASSDHYSCLVDVL 213
+D G E + YS ++D +
Sbjct: 610 MKDKGFEYDAITYSSILDAV 629
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK------ 130
+AALNL+ + G+ +P + LI+ R G L +C F MD+
Sbjct: 309 LAALNLLNHMREVGV----EPGVIHFTTLIDGLSRAGKL-EACKYF-----MDETVKVGC 358
Query: 131 --DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 188
DVV ++ +I+ Y GE + A E FKEM G P+ T+ +++ AG +A C
Sbjct: 359 TPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA-C 417
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
+ G + YS LV+ L AG++ EA+EV++ M K
Sbjct: 418 ALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
+ V ++ LI +Y K A+ F +M+ AG +PD +T+ ++ + AGF D A+ +
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM------PVKVTAKAWGALLGA 244
RMQ + G+ + YS +++ L +AG L A+ + M P VT AL
Sbjct: 453 QRMQ-EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Query: 245 CRNFGELGLAEIAGRASAEVEPENAANYVLL 275
RN+ E L +A +P+ +++
Sbjct: 512 ARNY-ETALKLYRDMQNAGFQPDKVTYSIVM 541
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
S +I G+ G L + +F +M + ++V ++ +I+ +A + AL+ +++M+
Sbjct: 468 SVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN 527
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
AG +PD +T+ V++ H GF ++A F MQR V Y LVD+ +AG +
Sbjct: 528 AGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVD 586
Query: 221 EAYEVIRGM 229
+A++ + M
Sbjct: 587 KAWQWYQAM 595
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--DKDVVAWSSLISAYALHGEA 148
+R+ P+ + LI +YGR L + NVF++M++ + D V + +LI +A G
Sbjct: 386 VRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFL 445
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
A++ ++ M+ AG+ PD T+ ++ AG A F M G + ++
Sbjct: 446 DIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMV-GQGCTPNLVTFNI 504
Query: 209 LVDVLSRAGRLHEAYEVIRGM------PVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
++ + ++A A ++ R M P KVT +LG C G E A A
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC------GFLEEAEGVFA 558
Query: 263 EVEPENAAN----YVLLAKMYASVG 283
E++ +N Y LL ++ G
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAG 583
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
S I Y + G LV++ +M + M++DVV++S LI + G + AL +M
Sbjct: 246 SNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIK 305
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
GV+P+ IT+ +++ G ++A F R+ G+E Y L+D + R G L+
Sbjct: 306 EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL-SVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 221 EAYEVIRGM 229
A+ ++ M
Sbjct: 365 RAFSMLGDM 373
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 94/230 (40%), Gaps = 11/230 (4%)
Query: 5 YAHSPDNLPTALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXX 61
Y H D AL LF M+ + PN T++ +I+ L + S A L M
Sbjct: 273 YRHVDD----ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS-DASQLLSDMIEKKIN 327
Query: 62 XXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNV 121
V ++++ I+ IDP + L+ + L + +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 122 FSKM--RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
F M +D DVV +++LI + + E F+EM G+ D +T+ +++ H
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
G D+A F +M D GV YS L+D L G+L +A EV M
Sbjct: 448 DGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 6/212 (2%)
Query: 24 VPPNESTFNPIIAALAAQNDGSF-KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNL 82
+ PN TFN +I A + G F +A LY M L+
Sbjct: 326 INPNLVTFNALIDAFVKE--GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLIS 140
K++ + + D P + LI+ + + + + +F +M R + D V +++LI
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 200
G+ A + FK+M GV PD +T+ +L + G + AL F MQ+ ++
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIK 502
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
Y+ +++ + +AG++ + +++ + +K
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 80 LNLIKEIHG--YGIRN-DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVA 134
L+++KE + +R DI+P+ + ++ YG + ++F M +D++++VV
Sbjct: 343 LDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVT 402
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
++++I Y E + A +EM+ G++P+ IT+ ++ AG D A F ++
Sbjct: 403 YNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL- 461
Query: 195 RDYGVEASSDHYSCLVDVLSRAG 217
R GVE Y ++ R G
Sbjct: 462 RSSGVEIDQVLYQTMIVAYERVG 484
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLISAYALHGEA 148
IR I P + + LI+ + + G + + F +M RD+ DV+ ++++IS + G+
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
A + F EM G++PD +TF ++ AG DA M + G + Y+
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTT 461
Query: 209 LVDVLSRAGRLHEAYEVIRGM 229
L+D L + G L A E++ M
Sbjct: 462 LIDGLCKEGDLDSANELLHEM 482
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLISAYALHGEA 148
IR I P + + LI+ + + G + + F +M RD+ DV+ ++++IS + G+
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
A + F EM G++PD +TF ++ AG DA M + G + Y+
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTT 461
Query: 209 LVDVLSRAGRLHEAYEVIRGM 229
L+D L + G L A E++ M
Sbjct: 462 LIDGLCKEGDLDSANELLHEM 482
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK--DVVAW 135
AL+++ +I GI D+ + + L+ +YGR + VF MR + +VV +
Sbjct: 241 TALSVLGDIKQNGIIPDVVSY----TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
++LI AY +G A+E F++ME G+KP+ ++ +L ACS + + + Q
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ- 355
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEA---YEVIRGMPVKVTAKAWGALL-GACR 246
G+ ++ Y+ + A L +A Y+ +R VK + + L+ G+CR
Sbjct: 356 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 43/239 (17%)
Query: 15 ALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
AL F LM V P+ +TFN II L+ S +A+ L+ M
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS-QALDLFNSMREK------------- 180
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMD 129
R + P + ++ Y G + N VF M +
Sbjct: 181 --------------------RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
++V++++L+ AYA+HG + AL +++ G+ PD +++ +L + + A
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAKAWGALLGAC 245
F M+++ + + Y+ L+D G L EA E+ R M +K + LL AC
Sbjct: 281 FLMMRKERR-KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWS 136
A+NL+ ++ +R I P + LI A G G + V KM D + D+V +
Sbjct: 65 AMNLMDDM----LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 120
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
++SAY + AL F+ M+ A V+PD TF ++ S G + AL F M R+
Sbjct: 121 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM-RE 179
Query: 197 YGVEASSD--HYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAKAWGALLGA 244
E D ++ ++ + S G + V M +K ++ AL+GA
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 232
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK--DVVAW 135
AL+++ +I GI D+ + + L+ +YGR + VF MR + +VV +
Sbjct: 373 TALSVLGDIKQNGIIPDVVSY----TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
++LI AY +G A+E F++ME G+KP+ ++ +L ACS + + + Q
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ- 487
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEA---YEVIRGMPVKVTAKAWGALL-GACR 246
G+ ++ Y+ + A L +A Y+ +R VK + + L+ G+CR
Sbjct: 488 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 43/239 (17%)
Query: 15 ALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
AL F LM V P+ +TFN II L+ S +A+ L+ M
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS-QALDLFNSMREK------------- 312
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMD 129
R + P + ++ Y G + N VF M +
Sbjct: 313 --------------------RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
++V++++L+ AYA+HG + AL +++ G+ PD +++ +L + + A
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAKAWGALLGAC 245
F M+++ + + Y+ L+D G L EA E+ R M +K + LL AC
Sbjct: 413 FLMMRKERR-KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWS 136
A+NL+ ++ +R I P + LI A G G + V KM D + D+V +
Sbjct: 197 AMNLMDDM----LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
++SAY + AL F+ M+ A V+PD TF ++ S G + AL F M R+
Sbjct: 253 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM-RE 311
Query: 197 YGVEASSD--HYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAKAWGALLGA 244
E D ++ ++ + S G + V M +K ++ AL+GA
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 364
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 90/207 (43%), Gaps = 7/207 (3%)
Query: 22 MDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALN 81
+DV P+ +++ ++ N+ A+ + KM V +
Sbjct: 367 LDVMPSSTSYEKLVKYSCDSNE-VVTALDVVEKMGEAGLMISADILHSLLHAIDEVLEFD 425
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWSSLI 139
L++ IH + P+ + +I R + N+ +++ ++ + ++ ++
Sbjct: 426 LVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCIL 485
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
+ Y +AL K+M+ AGVKPD ITF ++ C+ +DA+ + + GV
Sbjct: 486 AGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQ----EDAITKYYEEMKQAGV 541
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVI 226
+A+ Y L+D + +G+ +A +V+
Sbjct: 542 QATKRIYMSLIDAYAASGKFEKAKQVL 568
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 119 CNVFSKMRDMDK------------DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
CNV R+ ++ DVV++SS+IS Y+ G L+ F M+ ++PD
Sbjct: 277 CNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPD 336
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
+ V+ A + A F +A M+ + G+E + Y+ L+ L +A + EA +V
Sbjct: 337 RKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVF 396
Query: 227 RGMPVK---VTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAK 277
M K T + + A + R GE +A EP Y++L +
Sbjct: 397 DEMLEKGLFPTIRTYHAFMRILRT-GEEVFELLAKMRKMGCEP-TVETYIMLIR 448
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 16 LELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV 75
L+ L V NE T+ I+ A+ D + KA + ++ C
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGD-TGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 76 N----VAALNLIKEIHGYGI-RNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--M 128
+AL + KE+ I RN + + LI+ + R G + + ++ +M+ +
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSF-----VYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 188
D+ ++S ISA + G+ A +T +EME GVKP+ T+ ++K + A + AL
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAY 223
+ M + G++ Y CL+ L + EAY
Sbjct: 821 CYEEM-KAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD--KDVVAWS 136
A+ +KE+ R P + +I Y + G + S VF MR V ++
Sbjct: 573 AIQTVKEMQKLRHR----PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
LI+ + + A+E EM +AGV + T+ +++ + G A YFTR+Q +
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
G++ Y L+ ++GR+ A V + M +
Sbjct: 689 -GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 128 MDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 187
+D V+ +++LI Y + GE A E F+EM + G P+ T+ +++ AG +A
Sbjct: 720 IDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA- 778
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
C+ + G + YS LV L +AG+L EA +VI+ M K
Sbjct: 779 CWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 15/251 (5%)
Query: 5 YAHSPDNLPTALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXX 61
Y H D AL LF M+ + PN T++ +I+ L + S A L M
Sbjct: 198 YRHVDD----ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS-DASQLLSDMIEKKIN 252
Query: 62 XXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNV 121
V +++H I+ IDP + LI + L + +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 122 FSKM--RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
F M +D D+ +++LI + + E F+EM G+ D +T+ +++ H
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAK 236
G D+A F +M D GV YS L+D L G+L +A EV M +K+
Sbjct: 373 DGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 237 AWGALL-GACR 246
+ ++ G C+
Sbjct: 432 IYTTMIEGMCK 442
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 6/212 (2%)
Query: 24 VPPNESTFNPIIAALAAQNDGSF-KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNL 82
+ PN TFN +I A + G F +A L+ M L+
Sbjct: 251 INPNLVTFNALIDAFVKE--GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLIS 140
K++ + + D P + LI+ + + + + +F +M R + D V +++LI
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 200
G+ A + FK+M GV PD +T+ +L + G + AL F MQ+ ++
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIK 427
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
Y+ +++ + +AG++ + +++ + +K
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 124 KMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 183
K+ + DVV ++S + AY G+ + E +EM G P+ +T+ V+ + +
Sbjct: 300 KVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQV 359
Query: 184 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
+AL + +M+ D G + YS L+ +LS+ GR +A E+ M
Sbjct: 360 AEALGVYEKMKED-GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWSS 137
L L +++ G +P L + LI + + G + ++ ++ +M+ +D D+V ++
Sbjct: 188 LTLFQQMQELGY----EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
I ++ G+ A + F E+E G+KPD +T+ ++ A D+A+ F ++++
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK---VTAKAWGALLGACRNFGELGLA 254
V + Y+ ++ AG+ EAY ++ K + A+ +L R G++ A
Sbjct: 304 RVPCTY-AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 255 EIAGRASAEVEPENAANYVLLAKMYASVG 283
+ N + Y +L M G
Sbjct: 363 LKVFEEMKKDAAPNLSTYNILIDMLCRAG 391
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 7/220 (3%)
Query: 11 NLPTALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXX 67
N+ AL LF MD + PN T+N +I L S A L M
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS-DASRLLSDMIERKINPNVVTF 328
Query: 68 XXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM-- 125
V L ++++ I+ IDP S LI + L + ++F M
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 126 RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 185
+D +VV +++LI + + +E F+EM G+ + +T+ +++ AG D
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 186 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
A F +M D GV YS L+D L + G+L +A V
Sbjct: 449 AQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVV 487
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Query: 106 IEAYGRCGCLVNSCNVFSKMRDMDK--------DVVAWSSLISAYALHGEAKAALETFKE 157
I +G G L + ++F +M++ D+ ++SLI L G+AK AL + E
Sbjct: 255 IHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDE 314
Query: 158 MEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 217
++++G +PD T+ +++ C + DDA+ + MQ + G + Y+CL+D +A
Sbjct: 315 LKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYN-GFVPDTIVYNCLLDGTLKAR 373
Query: 218 RLHEAYEVIRGMPVK-VTAKAW 238
++ EA ++ M + V A W
Sbjct: 374 KVTEACQLFEKMVQEGVRASCW 395
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWSSLISAYALHGEA 148
+R P+ + + L+ + R G L+ + V +M++ ++ D+V +++L+S YA G+
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKA-CSHAGFADDALCYFTRMQRDYGVEASSDHYS 207
A + +M G +P+ + +++A C D+A+ F M+R YG EA Y+
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER-YGCEADIVTYT 346
Query: 208 CLVDVLSRAGRLHEAYEVIRGMPVK 232
L+ + G + + Y V+ M K
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKK 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD-MDKDVVAWSS 137
A+ ++ E+ YG+ +P + L++A + G + + VF MR+ ++ ++S
Sbjct: 186 AVEVLDEMPKYGL----EPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTS 241
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
L+ + G+ A E +M+ AG++PD + F +L +HAG DA M R
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDM-RKR 300
Query: 198 GVEASSDHYSCLVDVLSRA-GRLHEAYEVIRGM 229
G E + + Y+ L+ L R R+ EA V M
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM 333
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 28/202 (13%)
Query: 94 DIDPH---PQLGS--GLIEAYGRCGCLVNSCNVFS--KMRDMDKDVVAWSSLISAYALHG 146
D++ H P L + +I YGRCG + +F +++ D V ++SL+ A+A
Sbjct: 322 DMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARER 381
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
+ E +++M+ G D +T+ ++ G D AL + M+ G + Y
Sbjct: 382 NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 207 SCLVDVLSRAGRLHEAYEVIRGM---PVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+ L+D L +A R EA ++ M +K T + + AL+ C G A+ R AE
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI--C------GYAKAGKREEAE 493
Query: 264 ----------VEPENAANYVLL 275
+P+N A V+L
Sbjct: 494 DTFSCMLRSGTKPDNLAYSVML 515
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAW 135
+ + L+KE+ G++ P+ + I GR G + + + +M D DVV +
Sbjct: 241 SVMGLLKEMETLGLK----PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+ LI A + A E F++M+ KPD +T++ +L S D +++ M++
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
D G ++ LVD L +AG EA++ + M
Sbjct: 357 D-GHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
DV ++ L+ AY G+ E +KEM + + IT V+ AG DDAL +
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
+ D ++ Y L+D LS++GRL+EA ++ GM
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWS 136
AL L + G++ P I+ YG+ G V++ F KM+ + ++VA +
Sbjct: 417 ALELFGNMESLGVK----PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
+ + + A G + A + F ++ G+ PD +T+ ++K S G D+A+ + M +
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEV---IRGMPVKVTAKAWGALLGACRNFGEL 251
G E + L++ L +A R+ EA+++ ++ M +K T + LL G++
Sbjct: 533 -GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 11 NLPTALELFH-LM---DVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXX 66
N+ AL+L++ LM D P T+ P+I DG K+ LY
Sbjct: 870 NVDDALDLYYDLMSDRDFSPTACTYGPLI-------DGLSKSGRLYE------------- 909
Query: 67 XXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM- 125
A L + + YG R P+ + + LI +G+ G +C +F +M
Sbjct: 910 ------------AKQLFEGMLDYGCR----PNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 126 -RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 184
+ D+ +S L+ + G L FKE++ +G+ PD + + ++ + +
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 185 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
+AL F M+ G+ Y+ L+ L AG + EA ++
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 101/261 (38%), Gaps = 17/261 (6%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAAL----N 81
PNE T+ P++ + + A+ L RKM +L N
Sbjct: 210 PNEVTYGPVLKVMCKSGQTAL-AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLI 139
L E+ G + DI + + LI + G + + M R + DVVA+S+LI
Sbjct: 269 LFNEMEIKGFKADIIIY----TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
+ G+ + A E KEM G+ PD +T+ ++ D A + + G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA-NHMLDLMVSKGC 383
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGR 259
+ ++ L++ +A + + E+ R M ++ + F ELG E+A
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 260 -----ASAEVEPENAANYVLL 275
S V P+ + +LL
Sbjct: 444 LFQEMVSRRVRPDIVSYKILL 464
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 97 PHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLISAYALHGEAKAALET 154
P+ + + LI Y + + + +F KM R + D V +++LI + G+ + A E
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F+EM V+PD +++ +L G + AL F ++++ +E Y+ ++ +
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS-KMELDIGIYNIIIHGMC 503
Query: 215 RAGRLHEAYEVIRGMP---VKVTAKAWGALLGACRNFGELGLAEIAGRASAEV-EPENAA 270
A ++ +A+++ +P VK K + ++G G L A++ R E N
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 271 NYVLLAKMYASVG 283
Y +L + + G
Sbjct: 564 TYNILIRAHLGEG 576