Miyakogusa Predicted Gene

Lj0g3v0069469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0069469.1 tr|I0YVI9|I0YVI9_9CHLO TPR-like protein
OS=Coccomyxa subellipsoidea C-169 PE=4 SV=1,41.8,2e-18,SUBFAMILY NOT
NAMED,NULL; OSMOSIS RESPONSIVE FACTOR,NULL; Tetratricopeptide
repeats,Tetratricopeptid,CUFF.3332.1
         (209 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G77230.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   194   2e-50
AT4G30480.2 | Symbols: TPR1, AtTPR1 | Tetratricopeptide repeat (...    57   1e-08
AT1G62740.1 | Symbols: Hop2 | stress-inducible protein, putative...    52   2e-07
AT4G12400.1 | Symbols: Hop3 | stress-inducible protein, putative...    51   4e-07
AT4G12400.2 | Symbols: Hop3 | stress-inducible protein, putative...    51   5e-07
AT2G32450.1 | Symbols:  | Calcium-binding tetratricopeptide fami...    50   1e-06
AT4G08320.1 | Symbols: TPR8 | Tetratricopeptide repeat (TPR)-lik...    50   2e-06
AT4G30480.1 | Symbols: TPR1, AtTPR1 | Tetratricopeptide repeat (...    49   2e-06
AT3G11540.1 | Symbols: SPY | Tetratricopeptide repeat (TPR)-like...    49   3e-06
AT1G05150.1 | Symbols:  | Calcium-binding tetratricopeptide fami...    49   3e-06
AT3G58620.1 | Symbols: TTL4 | tetratricopetide-repeat thioredoxi...    49   3e-06
AT1G12270.1 | Symbols: Hop1 | stress-inducible protein, putative...    47   6e-06
AT4G08320.2 | Symbols: TPR8 | Tetratricopeptide repeat (TPR)-lik...    47   8e-06

>AT1G77230.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:29016129-29017873 FORWARD
           LENGTH=218
          Length = 218

 Score =  194 bits (494), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 107/217 (49%), Positives = 139/217 (64%), Gaps = 14/217 (6%)

Query: 1   MKVTWKNNNKKQKQRCLPTLSHFTDPPFXXXXXXXXXXX----------XXXXXXXXXGV 50
           MK+TW   NK  K+R    LS+F D PF                                
Sbjct: 1   MKLTW---NKNPKKRSRLVLSNFPDLPFEKDDSLESQSHLHFREDDIDRRQTTDQLDSSE 57

Query: 51  RAAPNPDQSLE-EARQLAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQ 109
               +P ++ + EA++LA+  +AQGD  A +GKY+EALGKWEAAL L P+  +LHEQKAQ
Sbjct: 58  VGGNHPRENFDVEAKKLAESIRAQGDKFAEEGKYQEALGKWEAALNLVPEDAILHEQKAQ 117

Query: 110 VLLEIGDAWNALKAATRATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYQ 169
           VLLE+GDAW ALKAATRATE++PSWAEAW TLGRAQLNFGEPD+AI SF+ AL +  D +
Sbjct: 118 VLLELGDAWKALKAATRATEIDPSWAEAWTTLGRAQLNFGEPDSAIRSFESALLINADSR 177

Query: 170 EARDDRQTALRLVKKRKQLHSSGLSDIQNRYSVGEKD 206
           EA+DD ++A +L+KKR+QL +SG      R+ V +K+
Sbjct: 178 EAKDDLKSAKQLIKKREQLQTSGQDTDTTRFVVNDKN 214


>AT4G30480.2 | Symbols: TPR1, AtTPR1 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr4:14897500-14898937
           FORWARD LENGTH=277
          Length = 277

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 61  EEARQLAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIP-------VLHEQKAQVLLE 113
           E+A   A E +A+G+ L V+G Y EAL K+  AL L  ++P       + +  +    L+
Sbjct: 99  EKALAEANEAKAEGNKLFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLK 158

Query: 114 IGDAWNALKAATRATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYQEAR 172
           +G     +K  T+A EL P++ +A V    A       ++A+    + L L P   +AR
Sbjct: 159 LGKCEETIKECTKALELNPTYNKALVRRAEAHEKLEHFEDAVTDLKKILELDPSNDQAR 217


>AT1G62740.1 | Symbols: Hop2 | stress-inducible protein, putative |
           chr1:23231026-23233380 FORWARD LENGTH=571
          Length = 571

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 48/101 (47%)

Query: 66  LAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAAT 125
           +A E +A+G+     G +  A+  +  A+ L P   VL   ++     +     AL  A 
Sbjct: 1   MADEAKAKGNAAFSSGDFNSAVNHFTDAINLTPTNHVLFSNRSAAHASLNHYDEALSDAK 60

Query: 126 RATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKP 166
           +  EL+P W + +  LG A L   + D A+E++ + L + P
Sbjct: 61  KTVELKPDWGKGYSRLGAAHLGLNQFDEAVEAYSKGLEIDP 101



 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 58/119 (48%)

Query: 66  LAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAAT 125
           +  E + +G++   + KY +A+  +  A+   P  P  +  +A    ++G     LK A 
Sbjct: 381 IGDEEREKGNDFFKEQKYPDAVRHYTEAIKRNPKDPRAYSNRAACYTKLGAMPEGLKDAE 440

Query: 126 RATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYQEARDDRQTALRLVKK 184
           +  EL+P++ + +   G  Q    E DNA+E++ + L   P+ QE  D  +  ++ + K
Sbjct: 441 KCIELDPTFLKGYSRKGAVQFFMKEYDNAMETYQKGLEHDPNNQELLDGVKRCVQQINK 499


>AT4G12400.1 | Symbols: Hop3 | stress-inducible protein, putative |
           chr4:7339024-7341239 REVERSE LENGTH=530
          Length = 530

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%)

Query: 66  LAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAAT 125
           +A+E +++G+     G Y  A+  +  A+ L+P   +L+  ++     +     AL  A 
Sbjct: 1   MAEEAKSKGNAAFSSGDYATAITHFTEAINLSPTNHILYSNRSASYASLHRYEEALSDAK 60

Query: 126 RATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKP 166
           +  EL+P W++ +  LG A +   + D A++S+ + L + P
Sbjct: 61  KTIELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDP 101



 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 55/119 (46%)

Query: 66  LAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAAT 125
           +A+E + +G+    + KY EA+  +  A+   P+    +  +A    ++G     LK A 
Sbjct: 368 IAEEEREKGNGFFKEQKYPEAVKHYSEAIKRNPNDVRAYSNRAACYTKLGALPEGLKDAE 427

Query: 126 RATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYQEARDDRQTALRLVKK 184
           +  EL+PS+ + +   G  Q    E D A+E++   L   P  QE  D  +  +  + K
Sbjct: 428 KCIELDPSFTKGYSRKGAIQFFMKEYDKAMETYQEGLKHDPKNQEFLDGVRRCVEQINK 486


>AT4G12400.2 | Symbols: Hop3 | stress-inducible protein, putative |
           chr4:7338866-7341239 REVERSE LENGTH=558
          Length = 558

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%)

Query: 66  LAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAAT 125
           +A+E +++G+     G Y  A+  +  A+ L+P   +L+  ++     +     AL  A 
Sbjct: 1   MAEEAKSKGNAAFSSGDYATAITHFTEAINLSPTNHILYSNRSASYASLHRYEEALSDAK 60

Query: 126 RATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKP 166
           +  EL+P W++ +  LG A +   + D A++S+ + L + P
Sbjct: 61  KTIELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDP 101



 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 55/119 (46%)

Query: 66  LAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAAT 125
           +A+E + +G+    + KY EA+  +  A+   P+    +  +A    ++G     LK A 
Sbjct: 368 IAEEEREKGNGFFKEQKYPEAVKHYSEAIKRNPNDVRAYSNRAACYTKLGALPEGLKDAE 427

Query: 126 RATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYQEARDDRQTALRLVKK 184
           +  EL+PS+ + +   G  Q    E D A+E++   L   P  QE  D  +  +  + K
Sbjct: 428 KCIELDPSFTKGYSRKGAIQFFMKEYDKAMETYQEGLKHDPKNQEFLDGVRRCVEQINK 486


>AT2G32450.1 | Symbols:  | Calcium-binding tetratricopeptide family
           protein | chr2:13778614-13781022 FORWARD LENGTH=802
          Length = 802

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%)

Query: 74  GDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAATRATELEPS 133
           G  L   G+YR A+   E A+ L PD    H   A  L  +G+   A++   RA +L+P 
Sbjct: 346 GSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHAMGEDERAIEVFQRAIDLKPG 405

Query: 134 WAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYQEARDDRQTAL 179
             +A   LG   ++ G    A E + R LA+ P++  A+ ++  +L
Sbjct: 406 HVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSL 451


>AT4G08320.1 | Symbols: TPR8 | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:5252853-5254990 FORWARD
           LENGTH=426
          Length = 426

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 62  EARQLAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNAL 121
           +   LA+  + QG+       Y EA+  +  A+ L     V +  +A    +I     A+
Sbjct: 170 DVNSLAETLKCQGNKAMQSNLYLEAVELYSFAIALTDKNAVFYCNRAAAYTQINMCSEAI 229

Query: 122 KAATRATELEPSWAEAWVTLGRAQLNFGEPDNAIE-SFDRALALKPDYQEARDDRQTALR 180
           K   ++ E++P++++A+  LG A    G+   AIE  F +AL L P  +  +++ + A +
Sbjct: 230 KDCLKSIEIDPNYSKAYSRLGLAYYAQGKYAEAIEKGFKKALLLDPHNESVKENIRVAEQ 289

Query: 181 LVKKRKQ 187
            +++ +Q
Sbjct: 290 KIREEQQ 296


>AT4G30480.1 | Symbols: TPR1, AtTPR1 | Tetratricopeptide repeat
           (TPR)-like superfamily protein | chr4:14897500-14898557
           FORWARD LENGTH=208
          Length = 208

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 7/80 (8%)

Query: 67  AKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIP-------VLHEQKAQVLLEIGDAWN 119
           A E +A+G+ L V+G Y EAL K+  AL L  ++P       + +  +    L++G    
Sbjct: 105 ANEAKAEGNKLFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEE 164

Query: 120 ALKAATRATELEPSWAEAWV 139
            +K  T+A EL P++ +A V
Sbjct: 165 TIKECTKALELNPTYNKALV 184


>AT3G11540.1 | Symbols: SPY | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:3632842-3637547 FORWARD
           LENGTH=914
          Length = 914

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%)

Query: 74  GDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAATRATELEPS 133
           G +L + G  +E + K+  AL + P     +     V  E+    NAL    +A    P 
Sbjct: 159 GTSLKLAGNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDNALSCYEKAALERPM 218

Query: 134 WAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYQEARDDRQTAL 179
           +AEA+  +G    N G+ + AI  ++R LA+ P+++ A+++   AL
Sbjct: 219 YAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNMAIAL 264


>AT1G05150.1 | Symbols:  | Calcium-binding tetratricopeptide family
           protein | chr1:1484280-1486706 REVERSE LENGTH=808
          Length = 808

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 51/106 (48%)

Query: 74  GDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAATRATELEPS 133
           G  L   G+YR A+   E A+ L PD    H   A  L  +G+   A++   RA +L+P 
Sbjct: 351 GSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIEVFQRAIDLKPG 410

Query: 134 WAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYQEARDDRQTAL 179
             +A   LG   ++ G    A E + R L + P++  A+ ++  +L
Sbjct: 411 HVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQLNKAVSL 456


>AT3G58620.1 | Symbols: TTL4 | tetratricopetide-repeat
           thioredoxin-like 4 | chr3:21680397-21682959 FORWARD
           LENGTH=682
          Length = 682

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 43/88 (48%)

Query: 67  AKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAATR 126
           ++E +  G+ +   G Y EAL  ++ A++L+P+ P     +A  L   G    A+K    
Sbjct: 211 SEEVKKAGNVMYRKGNYAEALALYDRAISLSPENPAYRSNRAAALAASGRLEEAVKECLE 270

Query: 127 ATELEPSWAEAWVTLGRAQLNFGEPDNA 154
           A   +PS+A A   L    L  GE +NA
Sbjct: 271 AVRCDPSYARAHQRLASLYLRLGEAENA 298


>AT1G12270.1 | Symbols: Hop1 | stress-inducible protein, putative |
           chr1:4172105-4174575 FORWARD LENGTH=572
          Length = 572

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 57/120 (47%)

Query: 65  QLAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAA 124
           +L  E + +G++   + KY EA+  +  A+   P+    +  +A    ++G     LK A
Sbjct: 381 KLGDEEREKGNDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGLKDA 440

Query: 125 TRATELEPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKPDYQEARDDRQTALRLVKK 184
            +  EL+P++++ +      Q    E DNA+E++   L   P  QE  D  +  ++ + K
Sbjct: 441 EKCIELDPTFSKGYSRKAAVQFFLKEYDNAMETYQAGLEHDPSNQELLDGVKRCVQQINK 500


>AT4G08320.2 | Symbols: TPR8 | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:5252853-5254990 FORWARD
           LENGTH=427
          Length = 427

 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 1/118 (0%)

Query: 62  EARQLAKEFQAQGDNLAVDGKYREALGKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNAL 121
           +   LA+  + QG+       Y EA+  +  A+ L     V +  +A    +I     A+
Sbjct: 170 DVNSLAETLKCQGNKAMQSNLYLEAVELYSFAIALTDKNAVFYCNRAAAYTQINMCSEAI 229

Query: 122 KAATRATELEPSWAEAWVTLGRAQLNFGEPDNAIE-SFDRALALKPDYQEARDDRQTA 178
           K   ++ E++P++++A+  LG A    G+   AIE  F +AL L P  +  +++ + A
Sbjct: 230 KDCLKSIEIDPNYSKAYSRLGLAYYAQGKYAEAIEKGFKKALLLDPHNESVKENIRVA 287