Miyakogusa Predicted Gene

Lj0g3v0069249.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0069249.1 tr|G7LB10|G7LB10_MEDTR Cell division protease
ftsH-like protein OS=Medicago truncatula GN=MTR_8g0568,76.27,0,FTSH
HOMOLOG,NULL; METALLOPROTEASE M41 FTSH,NULL; P-loop containing
nucleoside triphosphate hydrolas,CUFF.3313.1
         (532 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79560.1 | Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH pro...   686   0.0  

>AT1G79560.1 | Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH
           protease 12 | chr1:29926976-29932308 FORWARD LENGTH=1008
          Length = 1008

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/547 (62%), Positives = 420/547 (76%), Gaps = 16/547 (2%)

Query: 1   MDLIISHSPNPLFVSSSPFPSTSQNPTFLTFAAPY---SRRRKLKFRASASADPNGAGAS 57
           M++ IS+ PNPL  SS+     S++   + F A Y   + R+K  FR  AS   +G+ ++
Sbjct: 1   MEIAISYKPNPLISSSTQLLKRSKSFGLVRFPAKYGLGATRKKQLFRVYASESSSGSSSN 60

Query: 58  S-----WF---QPLQRASRRFWVKFGDLVKKETGVDLEDGAVKLGEFV----DGVKYNGD 105
           S     W    Q ++  + R   K G+ VK E G D E+ + ++ E+V    D V     
Sbjct: 61  SDGGFSWVRLAQSIRLGAERIGEKIGESVKTEIGFDSEEASGRVNEYVARVKDSVHKGHH 120

Query: 106 EFGRIGTRSVTQFVDWNRLERWKDLKNWEPKRIGALVLYILVVAFACRGVYVAIQAPYLN 165
           E  R    +V  F+DWN+ E WKD++NW+ KR+ AL +Y   +  +C+ VYVAIQAP + 
Sbjct: 121 ELTRFKNETVPSFIDWNKWEHWKDIRNWDGKRVAALFIYAFALLLSCQRVYVAIQAPRVE 180

Query: 166 RQRKELTEAYMEALIPEPSPSNIRRFEKGMWKRTMPKGLKMKKLIERPDGTLVHDTTYVG 225
           R+R+ELTE++MEALIPEPSP NI +F++ MW++  PKGLK+K+ IE PDGTLVHD++YVG
Sbjct: 181 RERRELTESFMEALIPEPSPGNIEKFKRNMWRKATPKGLKLKRFIEAPDGTLVHDSSYVG 240

Query: 226 EDAWEDDQETPEEHVKQIIKDDERLNRQEKKELTKDLGISGEVQIE-GTWRERLHKWKEI 284
           E+AW+DD ET E  +K+II  + R+  + KK+L++DLG+SGE+    G WRERL  WKE+
Sbjct: 241 ENAWDDDLETTEGSLKKIIGRNARIQTEAKKKLSQDLGVSGEIGDSVGNWRERLATWKEM 300

Query: 285 LRKERLVEQLDSLNAKYVVEFDMKEVENSLRKDVAEKATATPGTRGLWIAKRWWRYRPKL 344
           L +E+L EQL+S  AKYVVEFDMKEVE SLR+DV  + + T GTR LWI+KRWWRYRPKL
Sbjct: 301 LEREKLSEQLNSSAAKYVVEFDMKEVEKSLREDVIGRTSETEGTRALWISKRWWRYRPKL 360

Query: 345 PYNYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPHMFEIITSSGVEVD 404
           PY YFL+KLDSSEVAAVVFTEDLKRLYVTMKEGFPLEY+VDIPLDP++FE I ++GVEVD
Sbjct: 361 PYTYFLQKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYIVDIPLDPYLFETICNAGVEVD 420

Query: 405 LLQKQQIHYFMKVVIALLPGILILWLIRESMTLLLITSKRFLYKKYNQLYDMAHAENFIM 464
           LLQK+QIHYFMKV IALLPGILILW IRES  LLLITSKRFLYKKYNQL+DMA+AENFI+
Sbjct: 421 LLQKRQIHYFMKVFIALLPGILILWFIRESAMLLLITSKRFLYKKYNQLFDMAYAENFIL 480

Query: 465 PVGDVGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQFYEKDVNFVRGVLLSGPPGTGKT 524
           PVGDV ETKSMYKEVVLGGDVWDLLDELMIYMGNPMQ+YEKDV FVRGVLLSGPPGTGKT
Sbjct: 481 PVGDVSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKT 540

Query: 525 LFARTLA 531
           LFARTLA
Sbjct: 541 LFARTLA 547