Miyakogusa Predicted Gene
- Lj0g3v0069149.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0069149.1 tr|P93769|P93769_TOBAC Elongation factor 1-alpha
OS=Nicotiana tabacum GN=tel1 PE=2 SV=1,98.32,0,P-loop containing
nucleoside triphosphate hydrolases,NULL; ELONGATNFCT,Elongation
factor, GTP-bindin,CUFF.3318.1
(179 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60390.3 | Symbols: | GTP binding Elongation factor Tu famil... 372 e-104
AT5G60390.1 | Symbols: | GTP binding Elongation factor Tu famil... 372 e-104
AT1G07940.2 | Symbols: | GTP binding Elongation factor Tu famil... 372 e-104
AT1G07940.1 | Symbols: | GTP binding Elongation factor Tu famil... 372 e-104
AT1G07930.1 | Symbols: | GTP binding Elongation factor Tu famil... 372 e-104
AT1G07920.1 | Symbols: | GTP binding Elongation factor Tu famil... 372 e-104
AT1G07930.2 | Symbols: | GTP binding Elongation factor Tu famil... 370 e-103
AT5G60390.2 | Symbols: | GTP binding Elongation factor Tu famil... 370 e-103
AT5G10630.2 | Symbols: | Translation elongation factor EF1A/ini... 175 2e-44
AT5G10630.1 | Symbols: | Translation elongation factor EF1A/ini... 175 2e-44
AT1G18070.2 | Symbols: | Translation elongation factor EF1A/ini... 171 3e-43
AT1G18070.1 | Symbols: | Translation elongation factor EF1A/ini... 171 3e-43
AT1G18070.3 | Symbols: | Translation elongation factor EF1A/ini... 171 4e-43
AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase ho... 104 3e-23
AT4G02930.1 | Symbols: | GTP binding Elongation factor Tu famil... 100 7e-22
AT5G39900.1 | Symbols: | Small GTP-binding protein | chr5:15976... 59 2e-09
AT5G08650.1 | Symbols: | Small GTP-binding protein | chr5:28065... 58 3e-09
AT3G22980.1 | Symbols: | Ribosomal protein S5/Elongation factor... 57 5e-09
AT2G45030.1 | Symbols: | Translation elongation factor EFG/EF2 ... 57 9e-09
AT1G45332.1 | Symbols: | Translation elongation factor EFG/EF2 ... 57 9e-09
AT2G31060.3 | Symbols: | elongation factor family protein | chr... 55 3e-08
AT1G62750.1 | Symbols: ATSCO1, ATSCO1/CPEF-G, SCO1 | Translation... 53 1e-07
AT2G31060.2 | Symbols: | elongation factor family protein | chr... 51 4e-07
AT1G06220.1 | Symbols: MEE5, CLO, GFA1 | Ribosomal protein S5/El... 50 1e-06
AT1G06220.2 | Symbols: MEE5 | Ribosomal protein S5/Elongation fa... 50 1e-06
AT5G13650.2 | Symbols: | elongation factor family protein | chr... 48 4e-06
AT5G13650.1 | Symbols: | elongation factor family protein | chr... 48 4e-06
>AT5G60390.3 | Symbols: | GTP binding Elongation factor Tu family
protein | chr5:24289226-24290675 FORWARD LENGTH=449
Length = 449
Score = 372 bits (956), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/179 (98%), Positives = 179/179 (100%)
Query: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+R+DEI+KEVSSYLK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>AT5G60390.1 | Symbols: | GTP binding Elongation factor Tu family
protein | chr5:24289226-24290675 FORWARD LENGTH=449
Length = 449
Score = 372 bits (956), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/179 (98%), Positives = 179/179 (100%)
Query: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+R+DEI+KEVSSYLK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>AT1G07940.2 | Symbols: | GTP binding Elongation factor Tu family
protein | chr1:2463350-2464792 REVERSE LENGTH=449
Length = 449
Score = 372 bits (956), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/179 (98%), Positives = 179/179 (100%)
Query: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+R+DEI+KEVSSYLK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>AT1G07940.1 | Symbols: | GTP binding Elongation factor Tu family
protein | chr1:2463350-2464792 REVERSE LENGTH=449
Length = 449
Score = 372 bits (956), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/179 (98%), Positives = 179/179 (100%)
Query: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+R+DEI+KEVSSYLK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>AT1G07930.1 | Symbols: | GTP binding Elongation factor Tu family
protein | chr1:2459014-2460458 FORWARD LENGTH=449
Length = 449
Score = 372 bits (956), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/179 (98%), Positives = 179/179 (100%)
Query: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+R+DEI+KEVSSYLK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>AT1G07920.1 | Symbols: | GTP binding Elongation factor Tu family
protein | chr1:2455559-2457001 FORWARD LENGTH=449
Length = 449
Score = 372 bits (956), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/179 (98%), Positives = 179/179 (100%)
Query: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+R+DEI+KEVSSYLK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>AT1G07930.2 | Symbols: | GTP binding Elongation factor Tu family
protein | chr1:2459014-2460458 FORWARD LENGTH=372
Length = 372
Score = 370 bits (951), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/179 (98%), Positives = 179/179 (100%)
Query: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+R+DEI+KEVSSYLK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>AT5G60390.2 | Symbols: | GTP binding Elongation factor Tu family
protein | chr5:24289226-24290577 FORWARD LENGTH=400
Length = 400
Score = 370 bits (950), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/179 (98%), Positives = 179/179 (100%)
Query: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK+R+DEI+KEVSSYLK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>AT5G10630.2 | Symbols: | Translation elongation factor
EF1A/initiation factor IF2gamma family protein |
chr5:3360561-3364414 FORWARD LENGTH=668
Length = 668
Score = 175 bits (443), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/174 (47%), Positives = 119/174 (68%), Gaps = 3/174 (1%)
Query: 7 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAE 66
+N+ ++GHVDSGKST +G L++ LG I ++ + ++EKEA K SF YAW LD+ E
Sbjct: 240 QLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEE 299
Query: 67 RERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAG 126
RERGIT+ +A+ F + +++ ++D+PGH+DF+ NMI G +QAD A+L+ID++ G FEAG
Sbjct: 300 RERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAG 359
Query: 127 ISK-DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
GQTREHA + GV+Q+I NKMD YSK RFD I + V S+L+
Sbjct: 360 FDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQ 411
>AT5G10630.1 | Symbols: | Translation elongation factor
EF1A/initiation factor IF2gamma family protein |
chr5:3360561-3364414 FORWARD LENGTH=667
Length = 667
Score = 175 bits (443), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/174 (47%), Positives = 119/174 (68%), Gaps = 3/174 (1%)
Query: 7 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAE 66
+N+ ++GHVDSGKST +G L++ LG I ++ + ++EKEA K SF YAW LD+ E
Sbjct: 239 QLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEE 298
Query: 67 RERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAG 126
RERGIT+ +A+ F + +++ ++D+PGH+DF+ NMI G +QAD A+L+ID++ G FEAG
Sbjct: 299 RERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAG 358
Query: 127 ISK-DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
GQTREHA + GV+Q+I NKMD YSK RFD I + V S+L+
Sbjct: 359 FDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQ 410
>AT1G18070.2 | Symbols: | Translation elongation factor
EF1A/initiation factor IF2gamma family protein |
chr1:6214236-6218211 REVERSE LENGTH=532
Length = 532
Score = 171 bits (433), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 118/175 (67%)
Query: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
K H+N+V IGHVD+GKST G +++ G +D R I+++EKEA + ++ S+ A+++D +
Sbjct: 99 KRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNE 158
Query: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
ER +G T+++ FET T++DAPGH+ ++ NMI+G SQAD VL+I + G FE
Sbjct: 159 EERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFE 218
Query: 125 AGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
G + GQTREH LA TLGV ++I NKMD T +SK R+DEI +++ +LK
Sbjct: 219 TGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLK 273
>AT1G18070.1 | Symbols: | Translation elongation factor
EF1A/initiation factor IF2gamma family protein |
chr1:6214236-6218211 REVERSE LENGTH=532
Length = 532
Score = 171 bits (433), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 118/175 (67%)
Query: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
K H+N+V IGHVD+GKST G +++ G +D R I+++EKEA + ++ S+ A+++D +
Sbjct: 99 KRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNE 158
Query: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
ER +G T+++ FET T++DAPGH+ ++ NMI+G SQAD VL+I + G FE
Sbjct: 159 EERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFE 218
Query: 125 AGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
G + GQTREH LA TLGV ++I NKMD T +SK R+DEI +++ +LK
Sbjct: 219 TGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLK 273
>AT1G18070.3 | Symbols: | Translation elongation factor
EF1A/initiation factor IF2gamma family protein |
chr1:6214236-6218211 REVERSE LENGTH=543
Length = 543
Score = 171 bits (432), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 118/175 (67%)
Query: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
K H+N+V IGHVD+GKST G +++ G +D R I+++EKEA + ++ S+ A+++D +
Sbjct: 99 KRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNE 158
Query: 65 AERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
ER +G T+++ FET T++DAPGH+ ++ NMI+G SQAD VL+I + G FE
Sbjct: 159 EERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFE 218
Query: 125 AGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLK 179
G + GQTREH LA TLGV ++I NKMD T +SK R+DEI +++ +LK
Sbjct: 219 TGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLK 273
>AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase
homolog E1B | chr4:10990036-10991466 FORWARD LENGTH=476
Length = 476
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
++K H+NI IGHVD GK+T T L L I V +++++ +D
Sbjct: 75 RKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE---------------IDA 119
Query: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ G
Sbjct: 120 APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 179
Query: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 156
QT+EH LLA +GV M+ NK D
Sbjct: 180 MP-------QTKEHILLAKQVGVPDMVVFLNKED 206
>AT4G02930.1 | Symbols: | GTP binding Elongation factor Tu family
protein | chr4:1295751-1298354 REVERSE LENGTH=454
Length = 454
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 83/154 (53%), Gaps = 22/154 (14%)
Query: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
+ K H+N+ IGHVD GK+T T I K + E + +A ++ +DK
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTA-------AITKVLAEEGKAKAIAFDE--------IDK 107
Query: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
E++RGITI A ++ET K + +D PGH D++KNMITG +Q D +L++ G
Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167
Query: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 156
QT+EH LLA +GV ++C NK+D
Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVD 194
>AT5G39900.1 | Symbols: | Small GTP-binding protein |
chr5:15976719-15978925 REVERSE LENGTH=663
Length = 663
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 33/160 (20%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
N +I H+D GKST L+ G I K+ LDKL+ ERE
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTGTI----------------KKGHGQPQYLDKLQVERE 111
Query: 69 RGITIDIALWKF---------ETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST 119
RGIT+ E + Y +ID PGH DF + S A+L++D+
Sbjct: 112 RGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAA 171
Query: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
G QT + LAF + ++ NK+D T
Sbjct: 172 QG-------VQAQTVANFYLAFEANLT-IVPVINKIDQPT 203
>AT5G08650.1 | Symbols: | Small GTP-binding protein |
chr5:2806533-2813220 REVERSE LENGTH=681
Length = 681
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 30/169 (17%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 69 RGITIDIAL----WKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
RGITI + + +E T + +ID PGH DF + + + A+L++D++ G
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG--- 188
Query: 125 AGISKDGQTREHALLAFTLGVKQMICCCNKMD--ATTPKYSKSRFDEIV 171
+ QT + LA + ++I NK+D P+ +E++
Sbjct: 189 ----VEAQTLANVYLALENNL-EIIPVLNKIDLPGAEPEKVLREIEEVI 232
>AT3G22980.1 | Symbols: | Ribosomal protein S5/Elongation factor
G/III/V family protein | chr3:8160269-8163316 REVERSE
LENGTH=1015
Length = 1015
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 29/174 (16%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
NI ++ HVD GK+T HLI GG ++ R +D L E+
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG-------------GVLHPRLAGKLRFMDYLDEEQR 57
Query: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
R IT+ + + Y +ID+PGH DF + T +D A++++D+ G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG------- 110
Query: 129 KDGQTREHALLAFTLGVKQMIC-CCNKMD------ATTPKYSKSRFDEIVKEVS 175
+ HA+L K C NK+D +P + +R IV EV+
Sbjct: 111 --VHIQTHAVLRQAWIEKLTPCLVLNKIDRLIFELRLSPMEAYTRLIRIVHEVN 162
>AT2G45030.1 | Symbols: | Translation elongation factor EFG/EF2
protein | chr2:18572411-18576756 FORWARD LENGTH=754
Length = 754
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
NI + H+DSGK+T T +++ G I E E+ R A +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI---------HEIHEVRGRDGVGA-KMDSMDLERE 116
Query: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
+GITI A Y +ID PGH DF + D A+L++ S G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 129 KDGQTREH 136
D Q R +
Sbjct: 177 VDRQMRRY 184
>AT1G45332.1 | Symbols: | Translation elongation factor EFG/EF2
protein | chr1:17172507-17176683 REVERSE LENGTH=754
Length = 754
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
NI + H+DSGK+T T +++ G I E E+ R A +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI---------HEIHEVRGRDGVGA-KMDSMDLERE 116
Query: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
+GITI A Y +ID PGH DF + D A+L++ S G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 129 KDGQTREH 136
D Q R +
Sbjct: 177 VDRQMRRY 184
>AT2G31060.3 | Symbols: | elongation factor family protein |
chr2:13213496-13218544 REVERSE LENGTH=671
Length = 671
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
N+ VI HVD GK+T L+ + G + +D + ERE
Sbjct: 61 NVAVIAHVDHGKTTLMDRLLRQCGA-------------------DIPHERAMDSINLERE 101
Query: 69 RGITIDIALWKFETTKYY----CTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFE 124
RGITI + F T+ ++ ++D PGH DF + + A+L++D+ G
Sbjct: 102 RGITISSKVSPFVTSIFWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPL- 160
Query: 125 AGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEI 170
QT+ A G++ I NK+D P ++ R DE+
Sbjct: 161 ------AQTKFVLAKALKYGLRP-ILLLNKVD--RPSVTEERCDEV 197
>AT1G62750.1 | Symbols: ATSCO1, ATSCO1/CPEF-G, SCO1 | Translation
elongation factor EFG/EF2 protein |
chr1:23233622-23236321 REVERSE LENGTH=783
Length = 783
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
NI ++ H+D+GK+TTT ++Y G + ++ E E A +D ++ E+E
Sbjct: 98 NIGIMAHIDAGKTTTTERILYYTGR-NYKIGEVHEGTAT------------MDWMEQEQE 144
Query: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
RGITI A K+ +ID PGH DF + D A+ + DS AG+
Sbjct: 145 RGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV-----AGVE 199
Query: 129 KDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSS 176
+T A GV + IC NKMD + ++R D IV + +
Sbjct: 200 PQSETVWRQ--ADKYGVPR-ICFVNKMDRLGANFFRTR-DMIVTNLGA 243
>AT2G31060.2 | Symbols: | elongation factor family protein |
chr2:13213496-13218544 REVERSE LENGTH=667
Length = 667
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 29/162 (17%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
N+ VI HVD GK+T L+ + G + +D + ERE
Sbjct: 61 NVAVIAHVDHGKTTLMDRLLRQCGA-------------------DIPHERAMDSINLERE 101
Query: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
RGITI + ++D PGH DF + + A+L++D+ G
Sbjct: 102 RGITISSKVTSIFWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPL----- 156
Query: 129 KDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEI 170
QT+ A G++ I NK+D P ++ R DE+
Sbjct: 157 --AQTKFVLAKALKYGLRP-ILLLNKVD--RPSVTEERCDEV 193
>AT1G06220.1 | Symbols: MEE5, CLO, GFA1 | Ribosomal protein
S5/Elongation factor G/III/V family protein |
chr1:1900524-1904583 FORWARD LENGTH=987
Length = 987
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 17/118 (14%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
N+ ++GH+ GK+ L+ + + N ++ K+ D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQ------------THHMSTFNAKNEKHMKYTDTRVDEQE 187
Query: 69 RGITI-----DIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
R I+I + L + Y C ++D PGH +F M AD AVLI+D+ G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>AT1G06220.2 | Symbols: MEE5 | Ribosomal protein S5/Elongation
factor G/III/V family protein | chr1:1900524-1904583
FORWARD LENGTH=987
Length = 987
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 17/118 (14%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
N+ ++GH+ GK+ L+ + + N ++ K+ D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQ------------THHMSTFNAKNEKHMKYTDTRVDEQE 187
Query: 69 RGITI-----DIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
R I+I + L + Y C ++D PGH +F M AD AVLI+D+ G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>AT5G13650.2 | Symbols: | elongation factor family protein |
chr5:4397821-4402364 FORWARD LENGTH=676
Length = 676
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 21/116 (18%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
NI ++ HVD GK+T ++ + + ++ M +R ++D ERE
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQ---------AKVFRDNQVMQER------IMDSNDLERE 129
Query: 69 RGITIDIALWKFETTKYYCT---VIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
RGITI L K + Y T +ID PGH DF + + D +L++DS G
Sbjct: 130 RGITI---LSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 182
>AT5G13650.1 | Symbols: | elongation factor family protein |
chr5:4397821-4402364 FORWARD LENGTH=675
Length = 675
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 21/116 (18%)
Query: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
NI ++ HVD GK+T ++ + + ++ M +R ++D ERE
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQ---------AKVFRDNQVMQER------IMDSNDLERE 128
Query: 69 RGITIDIALWKFETTKYYCT---VIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
RGITI L K + Y T +ID PGH DF + + D +L++DS G
Sbjct: 129 RGITI---LSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 181