Miyakogusa Predicted Gene
- Lj0g3v0069139.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0069139.1 tr|Q3LUM2|Q3LUM2_GOSHI Elongation factor 1-alpha
OS=Gossypium hirsutum GN=EF1A5 PE=2 SV=1,95.35,0,no description,NULL;
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain,Translation elongation
factor EF1,CUFF.3317.1
(301 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60390.3 | Symbols: | GTP binding Elongation factor Tu famil... 590 e-169
AT5G60390.1 | Symbols: | GTP binding Elongation factor Tu famil... 590 e-169
AT1G07940.2 | Symbols: | GTP binding Elongation factor Tu famil... 590 e-169
AT1G07940.1 | Symbols: | GTP binding Elongation factor Tu famil... 590 e-169
AT1G07930.1 | Symbols: | GTP binding Elongation factor Tu famil... 590 e-169
AT1G07920.1 | Symbols: | GTP binding Elongation factor Tu famil... 590 e-169
AT5G60390.2 | Symbols: | GTP binding Elongation factor Tu famil... 464 e-131
AT1G07930.2 | Symbols: | GTP binding Elongation factor Tu famil... 230 1e-60
AT1G35550.1 | Symbols: | elongation factor Tu C-terminal domain... 176 1e-44
AT1G18070.2 | Symbols: | Translation elongation factor EF1A/ini... 155 2e-38
AT1G18070.1 | Symbols: | Translation elongation factor EF1A/ini... 155 2e-38
AT1G18070.3 | Symbols: | Translation elongation factor EF1A/ini... 148 4e-36
AT5G10630.2 | Symbols: | Translation elongation factor EF1A/ini... 135 5e-32
AT5G10630.1 | Symbols: | Translation elongation factor EF1A/ini... 135 5e-32
AT4G02930.1 | Symbols: | GTP binding Elongation factor Tu famil... 81 1e-15
AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase ho... 75 5e-14
>AT5G60390.3 | Symbols: | GTP binding Elongation factor Tu family
protein | chr5:24289226-24290675 FORWARD LENGTH=449
Length = 449
Score = 590 bits (1522), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/300 (94%), Positives = 294/300 (98%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 60
MICCCNKMDATTPKYSK+R+DEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 207
Query: 61 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGIVVT 120
LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG+IKPG+VVT
Sbjct: 208 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVT 267
Query: 121 FGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAAN 180
F PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AAN
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 181 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDA 240
FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDA
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDA 387
Query: 241 GLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAQKKG 300
G+VKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTGAKVTKAA KKG
Sbjct: 388 GMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKG 447
>AT5G60390.1 | Symbols: | GTP binding Elongation factor Tu family
protein | chr5:24289226-24290675 FORWARD LENGTH=449
Length = 449
Score = 590 bits (1522), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/300 (94%), Positives = 294/300 (98%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 60
MICCCNKMDATTPKYSK+R+DEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 207
Query: 61 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGIVVT 120
LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG+IKPG+VVT
Sbjct: 208 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVT 267
Query: 121 FGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAAN 180
F PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AAN
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 181 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDA 240
FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDA
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDA 387
Query: 241 GLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAQKKG 300
G+VKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTGAKVTKAA KKG
Sbjct: 388 GMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKG 447
>AT1G07940.2 | Symbols: | GTP binding Elongation factor Tu family
protein | chr1:2463350-2464792 REVERSE LENGTH=449
Length = 449
Score = 590 bits (1522), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/300 (94%), Positives = 294/300 (98%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 60
MICCCNKMDATTPKYSK+R+DEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 207
Query: 61 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGIVVT 120
LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG+IKPG+VVT
Sbjct: 208 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVT 267
Query: 121 FGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAAN 180
F PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AAN
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 181 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDA 240
FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDA
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDA 387
Query: 241 GLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAQKKG 300
G+VKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTGAKVTKAA KKG
Sbjct: 388 GMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKG 447
>AT1G07940.1 | Symbols: | GTP binding Elongation factor Tu family
protein | chr1:2463350-2464792 REVERSE LENGTH=449
Length = 449
Score = 590 bits (1522), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/300 (94%), Positives = 294/300 (98%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 60
MICCCNKMDATTPKYSK+R+DEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 207
Query: 61 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGIVVT 120
LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG+IKPG+VVT
Sbjct: 208 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVT 267
Query: 121 FGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAAN 180
F PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AAN
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 181 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDA 240
FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDA
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDA 387
Query: 241 GLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAQKKG 300
G+VKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTGAKVTKAA KKG
Sbjct: 388 GMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKG 447
>AT1G07930.1 | Symbols: | GTP binding Elongation factor Tu family
protein | chr1:2459014-2460458 FORWARD LENGTH=449
Length = 449
Score = 590 bits (1522), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/300 (94%), Positives = 294/300 (98%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 60
MICCCNKMDATTPKYSK+R+DEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 207
Query: 61 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGIVVT 120
LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG+IKPG+VVT
Sbjct: 208 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVT 267
Query: 121 FGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAAN 180
F PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AAN
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 181 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDA 240
FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDA
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDA 387
Query: 241 GLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAQKKG 300
G+VKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTGAKVTKAA KKG
Sbjct: 388 GMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKG 447
>AT1G07920.1 | Symbols: | GTP binding Elongation factor Tu family
protein | chr1:2455559-2457001 FORWARD LENGTH=449
Length = 449
Score = 590 bits (1522), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/300 (94%), Positives = 294/300 (98%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 60
MICCCNKMDATTPKYSK+R+DEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 207
Query: 61 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGIVVT 120
LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG+IKPG+VVT
Sbjct: 208 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVT 267
Query: 121 FGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAAN 180
F PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AAN
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 181 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDA 240
FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDA
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDA 387
Query: 241 GLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAQKKG 300
G+VKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTGAKVTKAA KKG
Sbjct: 388 GMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKG 447
>AT5G60390.2 | Symbols: | GTP binding Elongation factor Tu family
protein | chr5:24289226-24290577 FORWARD LENGTH=400
Length = 400
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 219/232 (94%), Positives = 228/232 (98%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 60
MICCCNKMDATTPKYSK+R+DEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 207
Query: 61 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGIVVT 120
LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG+IKPG+VVT
Sbjct: 208 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVT 267
Query: 121 FGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAAN 180
F PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AAN
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 181 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEP 232
FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEP
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEP 379
>AT1G07930.2 | Symbols: | GTP binding Elongation factor Tu family
protein | chr1:2459014-2460458 FORWARD LENGTH=372
Length = 372
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 105/108 (97%), Positives = 108/108 (100%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 60
MICCCNKMDATTPKYSK+R+DEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN
Sbjct: 148 MICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 207
Query: 61 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRV 108
LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRV 255
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/117 (93%), Positives = 114/117 (97%)
Query: 184 QVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGLV 243
+VIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDAG+V
Sbjct: 254 RVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMV 313
Query: 244 KMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAQKKG 300
KM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTGAKVTKAA KKG
Sbjct: 314 KMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKKG 370
>AT1G35550.1 | Symbols: | elongation factor Tu C-terminal
domain-containing protein | chr1:13112722-13113036
FORWARD LENGTH=104
Length = 104
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 90/104 (86%)
Query: 188 MNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGLVKMIP 247
MNH GQI NGY PVLDCHTSHIAVKF E+LTKID R+G E+EKEPKFLKN +A ++ M P
Sbjct: 1 MNHLGQIKNGYTPVLDCHTSHIAVKFSEILTKIDWRTGHEIEKEPKFLKNSEAAIINMTP 60
Query: 248 TKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAK 291
TKPMVVE +S YPPLGRFA+RDMRQTV VGVIKSV KKDP+GAK
Sbjct: 61 TKPMVVEAYSAYPPLGRFAIRDMRQTVGVGVIKSVVKKDPSGAK 104
>AT1G18070.2 | Symbols: | Translation elongation factor
EF1A/initiation factor IF2gamma family protein |
chr1:6214236-6218211 REVERSE LENGTH=532
Length = 532
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 153/282 (54%), Gaps = 8/282 (2%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDK-IPFVPISGFEGDNMIERST 59
+I NKMD T +SK R+DEI +++ +LK GYN K + F+PISG G NM +R
Sbjct: 242 LIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMG 301
Query: 60 N--LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGI 117
W+ GP+ E LD I P R + P R+P+ D +K +GTV +G+VE+G I+ G
Sbjct: 302 QEICPWWSGPSFFEVLDSIEIPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGD 359
Query: 118 VVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKE 177
+ P +V ++ + ++ A PG+N+ + + +D+ GFV S S +P
Sbjct: 360 SLVVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILSGFVLS-SIVNPVPA 418
Query: 178 AANFTSQVIIMN--HPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFL 235
F +Q+ I+ GY +L H + EL ++ID ++ K ++K+ F+
Sbjct: 419 VTEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELKSQIDLKTRKPMKKKVLFV 478
Query: 236 KNGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVG 277
KNG A + ++ T + +E FS++P LGRF +R +T+AVG
Sbjct: 479 KNGAAVVCRIQVTNSICIEKFSDFPQLGRFTLRTEGKTIAVG 520
>AT1G18070.1 | Symbols: | Translation elongation factor
EF1A/initiation factor IF2gamma family protein |
chr1:6214236-6218211 REVERSE LENGTH=532
Length = 532
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 153/282 (54%), Gaps = 8/282 (2%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDK-IPFVPISGFEGDNMIERST 59
+I NKMD T +SK R+DEI +++ +LK GYN K + F+PISG G NM +R
Sbjct: 242 LIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMG 301
Query: 60 N--LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGI 117
W+ GP+ E LD I P R + P R+P+ D +K +GTV +G+VE+G I+ G
Sbjct: 302 QEICPWWSGPSFFEVLDSIEIPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGD 359
Query: 118 VVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKE 177
+ P +V ++ + ++ A PG+N+ + + +D+ GFV S S +P
Sbjct: 360 SLVVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILSGFVLS-SIVNPVPA 418
Query: 178 AANFTSQVIIMN--HPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFL 235
F +Q+ I+ GY +L H + EL ++ID ++ K ++K+ F+
Sbjct: 419 VTEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELKSQIDLKTRKPMKKKVLFV 478
Query: 236 KNGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVG 277
KNG A + ++ T + +E FS++P LGRF +R +T+AVG
Sbjct: 479 KNGAAVVCRIQVTNSICIEKFSDFPQLGRFTLRTEGKTIAVG 520
>AT1G18070.3 | Symbols: | Translation elongation factor
EF1A/initiation factor IF2gamma family protein |
chr1:6214236-6218211 REVERSE LENGTH=543
Length = 543
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 153/293 (52%), Gaps = 19/293 (6%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDK-IPFVPISGFEGDNMIERST 59
+I NKMD T +SK R+DEI +++ +LK GYN K + F+PISG G NM +R
Sbjct: 242 LIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMG 301
Query: 60 N--LDWYKGPTLLEALDQINEPKRPSDKPLRL-----------PLQDVYKIGGIGTVPVG 106
W+ GP+ E LD I P R + P RL P+ D +K +GTV +G
Sbjct: 302 QEICPWWSGPSFFEVLDSIEIPPRDPNGPFRLLTGIDFMNCRMPIIDKFK--DMGTVVMG 359
Query: 107 RVETGVIKPGIVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 166
+VE+G I+ G + P +V ++ + ++ A PG+N+ + + +D+ GFV
Sbjct: 360 KVESGSIREGDSLVVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILSGFV 419
Query: 167 ASNSKDDPAKEAANFTSQVIIMN--HPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRS 224
S S +P F +Q+ I+ GY +L H + EL ++ID ++
Sbjct: 420 LS-SIVNPVPAVTEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELKSQIDLKT 478
Query: 225 GKELEKEPKFLKNGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVG 277
K ++K+ F+KNG A + ++ T + +E FS++P LGRF +R +T+AVG
Sbjct: 479 RKPMKKKVLFVKNGAAVVCRIQVTNSICIEKFSDFPQLGRFTLRTEGKTIAVG 531
>AT5G10630.2 | Symbols: | Translation elongation factor
EF1A/initiation factor IF2gamma family protein |
chr5:3360561-3364414 FORWARD LENGTH=668
Length = 668
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 7/286 (2%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 60
+I NKMD YSK RFD I + V S+L+ + + ++P+S E N++ ++
Sbjct: 382 VIVAINKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSD 439
Query: 61 ---LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPV-GRVETGVIKPG 116
WY+GP LL+A+D + P R KPL +P+ D + G V G++E G ++PG
Sbjct: 440 NRLSSWYQGPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQVSACGKLEAGAVRPG 499
Query: 117 IVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAK 176
V P+G ++S+E +A A GDNV ++ + + G V + D P
Sbjct: 500 SKVMVMPSGDQGTIRSLERDSQACTIARAGDNVALALQGIDANQVMAGDVLCH-PDFPVS 558
Query: 177 EAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLK 236
A + V+++ I G H + A +L+ +D ++G+ +K P+ L
Sbjct: 559 VATHLELMVLVLEGATPILLGSQLEFHVHHAKEAATVVKLVAMLDPKTGQPTKKSPRCLT 618
Query: 237 NGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 282
+ ++++ P+ VETFSE LGR +R +TVA+G + +
Sbjct: 619 AKQSAMLEVSLQNPVCVETFSESRALGRVFLRSSGRTVAMGKVTRI 664
>AT5G10630.1 | Symbols: | Translation elongation factor
EF1A/initiation factor IF2gamma family protein |
chr5:3360561-3364414 FORWARD LENGTH=667
Length = 667
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 7/286 (2%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN 60
+I NKMD YSK RFD I + V S+L+ + + ++P+S E N++ ++
Sbjct: 381 VIVAINKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSD 438
Query: 61 ---LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPV-GRVETGVIKPG 116
WY+GP LL+A+D + P R KPL +P+ D + G V G++E G ++PG
Sbjct: 439 NRLSSWYQGPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQVSACGKLEAGAVRPG 498
Query: 117 IVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAK 176
V P+G ++S+E +A A GDNV ++ + + G V + D P
Sbjct: 499 SKVMVMPSGDQGTIRSLERDSQACTIARAGDNVALALQGIDANQVMAGDVLCH-PDFPVS 557
Query: 177 EAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLK 236
A + V+++ I G H + A +L+ +D ++G+ +K P+ L
Sbjct: 558 VATHLELMVLVLEGATPILLGSQLEFHVHHAKEAATVVKLVAMLDPKTGQPTKKSPRCLT 617
Query: 237 NGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 282
+ ++++ P+ VETFSE LGR +R +TVA+G + +
Sbjct: 618 AKQSAMLEVSLQNPVCVETFSESRALGRVFLRSSGRTVAMGKVTRI 663
>AT4G02930.1 | Symbols: | GTP binding Elongation factor Tu family
protein | chr4:1295751-1298354 REVERSE LENGTH=454
Length = 454
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 130/298 (43%), Gaps = 47/298 (15%)
Query: 1 MICCCNKMDATTPKYSKSRFDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGDN-MIE 56
++C NK+D + ++E+ S+ K G D IP + +S +G N I
Sbjct: 186 LVCFLNKVDVVDDPELLELVEMELRELLSFYKFPG---DDIPIIRGSALSALQGTNDEIG 242
Query: 57 RSTNLDWYKGPTLLEALDQ-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKP 115
R L L++A+D+ I +P R DKP +P++DV+ I G GTV GR+E GVIK
Sbjct: 243 RQAILK------LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKV 296
Query: 116 GIVVTF-----GPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNS 170
G V G L + V VEM + L GDNVG ++ + +D++RG V +
Sbjct: 297 GEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVI--A 354
Query: 171 KDDPAKEAANFTSQVIIMN------HPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRS 224
K K F +++ ++ H N Y P T+ I K
Sbjct: 355 KPGSCKTYKKFEAEIYVLTKDEGGRHTAFFSN-YRPQFYLRTADITGKV----------- 402
Query: 225 GKELEKEPKFLKNGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 282
EL + K + GD P+ +ET RFA+R+ +TV GV+ V
Sbjct: 403 --ELPENVKMVMPGDNVTAVFELIMPVPLETGQ------RFALREGGRTVGAGVVSKV 452
>AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase
homolog E1B | chr4:10990036-10991466 FORWARD LENGTH=476
Length = 476
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 24/258 (9%)
Query: 36 YNPDKIPFVPISGFEG------DNMIERSTNLDWYKGPTLLEALDQ-INEPKRPSDKPLR 88
+N D IP + S + ++R N K L++A+D I P+R ++ P
Sbjct: 230 FNGDDIPIISGSALLAVETLTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFL 289
Query: 89 LPLQDVYKIGGIGTVPVGRVETGVIKPGIVVTFGPTGL----TTEVKSVEMHHEALQEAL 144
L ++DV+ I G GTV GRVE G +K G V GL + V VEM + L EAL
Sbjct: 290 LAVEDVFSITGRGTVATGRVERGTVKVGETVDL--VGLRETRSYTVTGVEMFQKILDEAL 347
Query: 145 PGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDC 204
GDNVG ++ + D++RG V + P + + II + G ++P
Sbjct: 348 AGDNVGLLLRGIQKADIQRGMVLAK----PGSITPHTKFEAIIYVLKKEEGGRHSPFFAG 403
Query: 205 HTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGLVKMIPTKPMVVETFSEYPPLGR 264
+ ++ ++ K+ + + ++E K + GD + + P+ E R
Sbjct: 404 YRPQFYMRTTDVTGKVTKIMNDK-DEESKMVMPGDRVKIVVELIVPVACEQGM------R 456
Query: 265 FAVRDMRQTVAVGVIKSV 282
FA+R+ +TV GVI ++
Sbjct: 457 FAIREGGKTVGAGVIGTI 474