Miyakogusa Predicted Gene
- Lj0g3v0069039.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0069039.1 Non Chatacterized Hit- tr|Q9C9B8|Q9C9B8_ARATH
Putative uncharacterized protein F2P9.16 OS=Arabidopsi,68.12,2e-19,
,CUFF.3299.1
(106 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G73970.1 | Symbols: | unknown protein; Has 34 Blast hits to ... 100 3e-22
>AT1G73970.1 | Symbols: | unknown protein; Has 34 Blast hits to 33
proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink). |
chr1:27817140-27819963 FORWARD LENGTH=803
Length = 803
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 58/69 (84%)
Query: 11 VGIQVLPNLMKLLAQLITKLPQDAQNIVLNELYSQVADSDDVIRKPTLVSWLQSLSYVCT 70
V IQVLP LMK LAQL+ KLP++ QN+VL ELY QVA+SDDVIRKP+LVSWLQSL+Y+C+
Sbjct: 721 VDIQVLPYLMKSLAQLVIKLPKERQNVVLGELYGQVAESDDVIRKPSLVSWLQSLNYLCS 780
Query: 71 NSTNQNAAS 79
N+ + AS
Sbjct: 781 NNRTEVLAS 789