Miyakogusa Predicted Gene

Lj0g3v0068489.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068489.2 Non Chatacterized Hit- tr|I1LXY1|I1LXY1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3920 PE=,94.44,0,no
description,NULL; Meth_synt_2,Methionine synthase, vitamin-B12
independent; 5-METHYLTETRAHYDROPTE,CUFF.3256.2
         (260 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G03780.3 | Symbols: ATMS2, MS2 | methionine synthase 2 | chr3...   506   e-144
AT3G03780.2 | Symbols: ATMS2, MS2 | methionine synthase 2 | chr3...   506   e-144
AT3G03780.1 | Symbols: ATMS2, MS2 | methionine synthase 2 | chr3...   506   e-144
AT5G17920.2 | Symbols: ATCIMS | Cobalamin-independent synthase f...   505   e-143
AT5G17920.1 | Symbols: ATCIMS, ATMETS, ATMS1 | Cobalamin-indepen...   505   e-143
AT5G20980.2 | Symbols: ATMS3, MS3 | methionine synthase 3 | chr5...   489   e-138
AT5G20980.1 | Symbols: ATMS3, MS3 | methionine synthase 3 | chr5...   489   e-138

>AT3G03780.3 | Symbols: ATMS2, MS2 | methionine synthase 2 |
           chr3:957602-960740 FORWARD LENGTH=765
          Length = 765

 Score =  506 bits (1303), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 239/270 (88%), Positives = 248/270 (91%), Gaps = 10/270 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYG          FWSSTAQS+TKRPMK
Sbjct: 496 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKPMTVFWSSTAQSMTKRPMK 555

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVR+DQPR ETCYQIALAIKDEVEDLEK GI VIQIDEAALREGLPL
Sbjct: 556 GMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPL 615

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RK+E +FYL+WAVHSFRITNCGV D+TQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS
Sbjct: 616 RKAEHSFYLDWAVHSFRITNCGVQDSTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 675

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLLSVFREGVKYGAGIGPGVYDIHSPRIP T+EIADRINKMLAVLE NILWVNPDCGL
Sbjct: 676 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTDEIADRINKMLAVLEQNILWVNPDCGL 735

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQLASAK 260
           KTRKYTEVK AL  MV AAKLIR+QL SAK
Sbjct: 736 KTRKYTEVKPALKAMVDAAKLIRSQLGSAK 765


>AT3G03780.2 | Symbols: ATMS2, MS2 | methionine synthase 2 |
           chr3:957602-960740 FORWARD LENGTH=765
          Length = 765

 Score =  506 bits (1303), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 239/270 (88%), Positives = 248/270 (91%), Gaps = 10/270 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYG          FWSSTAQS+TKRPMK
Sbjct: 496 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKPMTVFWSSTAQSMTKRPMK 555

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVR+DQPR ETCYQIALAIKDEVEDLEK GI VIQIDEAALREGLPL
Sbjct: 556 GMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPL 615

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RK+E +FYL+WAVHSFRITNCGV D+TQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS
Sbjct: 616 RKAEHSFYLDWAVHSFRITNCGVQDSTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 675

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLLSVFREGVKYGAGIGPGVYDIHSPRIP T+EIADRINKMLAVLE NILWVNPDCGL
Sbjct: 676 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTDEIADRINKMLAVLEQNILWVNPDCGL 735

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQLASAK 260
           KTRKYTEVK AL  MV AAKLIR+QL SAK
Sbjct: 736 KTRKYTEVKPALKAMVDAAKLIRSQLGSAK 765


>AT3G03780.1 | Symbols: ATMS2, MS2 | methionine synthase 2 |
           chr3:957602-960740 FORWARD LENGTH=765
          Length = 765

 Score =  506 bits (1303), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 239/270 (88%), Positives = 248/270 (91%), Gaps = 10/270 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYG          FWSSTAQS+TKRPMK
Sbjct: 496 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKPMTVFWSSTAQSMTKRPMK 555

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVR+DQPR ETCYQIALAIKDEVEDLEK GI VIQIDEAALREGLPL
Sbjct: 556 GMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPL 615

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RK+E +FYL+WAVHSFRITNCGV D+TQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS
Sbjct: 616 RKAEHSFYLDWAVHSFRITNCGVQDSTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 675

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLLSVFREGVKYGAGIGPGVYDIHSPRIP T+EIADRINKMLAVLE NILWVNPDCGL
Sbjct: 676 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTDEIADRINKMLAVLEQNILWVNPDCGL 735

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQLASAK 260
           KTRKYTEVK AL  MV AAKLIR+QL SAK
Sbjct: 736 KTRKYTEVKPALKAMVDAAKLIRSQLGSAK 765


>AT5G17920.2 | Symbols: ATCIMS | Cobalamin-independent synthase
           family protein | chr5:5935771-5939195 FORWARD LENGTH=765
          Length = 765

 Score =  505 bits (1301), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 238/270 (88%), Positives = 248/270 (91%), Gaps = 10/270 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYG          FWS+ AQS+T RPMK
Sbjct: 496 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMK 555

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVR+DQPR ETCYQIALAIKDEVEDLEK GI VIQIDEAALREGLPL
Sbjct: 556 GMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPL 615

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RKSE AFYL+WAVHSFRITNCGV D+TQIHTHMCYS+FNDIIHSIIDMDADVITIENSRS
Sbjct: 616 RKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRS 675

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLLSVFREGVKYGAGIGPGVYDIHSPRIP +EEIADR+NKMLAVLE NILWVNPDCGL
Sbjct: 676 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRVNKMLAVLEQNILWVNPDCGL 735

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQLASAK 260
           KTRKYTEVK AL NMV AAKLIR+QLASAK
Sbjct: 736 KTRKYTEVKPALKNMVDAAKLIRSQLASAK 765


>AT5G17920.1 | Symbols: ATCIMS, ATMETS, ATMS1 |
           Cobalamin-independent synthase family protein |
           chr5:5935771-5939195 FORWARD LENGTH=765
          Length = 765

 Score =  505 bits (1301), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 238/270 (88%), Positives = 248/270 (91%), Gaps = 10/270 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYG          FWS+ AQS+T RPMK
Sbjct: 496 MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMK 555

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVR+DQPR ETCYQIALAIKDEVEDLEK GI VIQIDEAALREGLPL
Sbjct: 556 GMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPL 615

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RKSE AFYL+WAVHSFRITNCGV D+TQIHTHMCYS+FNDIIHSIIDMDADVITIENSRS
Sbjct: 616 RKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRS 675

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLLSVFREGVKYGAGIGPGVYDIHSPRIP +EEIADR+NKMLAVLE NILWVNPDCGL
Sbjct: 676 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRVNKMLAVLEQNILWVNPDCGL 735

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQLASAK 260
           KTRKYTEVK AL NMV AAKLIR+QLASAK
Sbjct: 736 KTRKYTEVKPALKNMVDAAKLIRSQLASAK 765


>AT5G20980.2 | Symbols: ATMS3, MS3 | methionine synthase 3 |
           chr5:7124397-7128353 REVERSE LENGTH=812
          Length = 812

 Score =  489 bits (1258), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 227/266 (85%), Positives = 246/266 (92%), Gaps = 10/266 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVE+FGEQLSGFAFT+NGWVQSYGSRCVKPPIIYG          FWSS AQ +T+RPMK
Sbjct: 544 MVEFFGEQLSGFAFTSNGWVQSYGSRCVKPPIIYGDITRPKAMTVFWSSMAQKMTQRPMK 603

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVR+DQPR ETC+QIALAIKDEVEDLEKAG++VIQIDEAALREGLPL
Sbjct: 604 GMLTGPVTILNWSFVRNDQPRHETCFQIALAIKDEVEDLEKAGVTVIQIDEAALREGLPL 663

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RKSE+ FYL+WAVH+FRITN GV D+TQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS
Sbjct: 664 RKSEQKFYLDWAVHAFRITNSGVQDSTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 723

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLLSVF EGVKYGAGIGPGVYDIHSPRIP TEEIA+RINKMLAVL+S +LWVNPDCGL
Sbjct: 724 DEKLLSVFHEGVKYGAGIGPGVYDIHSPRIPSTEEIAERINKMLAVLDSKVLWVNPDCGL 783

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQL 256
           KTR Y+EVK+AL+NMVAAAKLIR+QL
Sbjct: 784 KTRNYSEVKSALSNMVAAAKLIRSQL 809


>AT5G20980.1 | Symbols: ATMS3, MS3 | methionine synthase 3 |
           chr5:7124397-7128353 REVERSE LENGTH=812
          Length = 812

 Score =  489 bits (1258), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 227/266 (85%), Positives = 246/266 (92%), Gaps = 10/266 (3%)

Query: 1   MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYG----------FWSSTAQSLTKRPMK 50
           MVE+FGEQLSGFAFT+NGWVQSYGSRCVKPPIIYG          FWSS AQ +T+RPMK
Sbjct: 544 MVEFFGEQLSGFAFTSNGWVQSYGSRCVKPPIIYGDITRPKAMTVFWSSMAQKMTQRPMK 603

Query: 51  GMLTGPVTILNWSFVRDDQPRFETCYQIALAIKDEVEDLEKAGISVIQIDEAALREGLPL 110
           GMLTGPVTILNWSFVR+DQPR ETC+QIALAIKDEVEDLEKAG++VIQIDEAALREGLPL
Sbjct: 604 GMLTGPVTILNWSFVRNDQPRHETCFQIALAIKDEVEDLEKAGVTVIQIDEAALREGLPL 663

Query: 111 RKSEEAFYLNWAVHSFRITNCGVNDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 170
           RKSE+ FYL+WAVH+FRITN GV D+TQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS
Sbjct: 664 RKSEQKFYLDWAVHAFRITNSGVQDSTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 723

Query: 171 DEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLESNILWVNPDCGL 230
           DEKLLSVF EGVKYGAGIGPGVYDIHSPRIP TEEIA+RINKMLAVL+S +LWVNPDCGL
Sbjct: 724 DEKLLSVFHEGVKYGAGIGPGVYDIHSPRIPSTEEIAERINKMLAVLDSKVLWVNPDCGL 783

Query: 231 KTRKYTEVKAALTNMVAAAKLIRNQL 256
           KTR Y+EVK+AL+NMVAAAKLIR+QL
Sbjct: 784 KTRNYSEVKSALSNMVAAAKLIRSQL 809