Miyakogusa Predicted Gene

Lj0g3v0068329.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068329.1 Non Chatacterized Hit- tr|K4AVE9|K4AVE9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,91.84,5e-18,PurA,PUR-alpha/beta/gamma, DNA/RNA-binding;
PUR-TRANSCRIPTIONAL ACTIVATOR,PUR-alpha/beta/gamma,
DNA/,NODE_32396_length_814_cov_492.296082.path1.1
         (158 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32080.2 | Symbols: PUR ALPHA-1 | purin-rich alpha 1 | chr2:1...   266   3e-72
AT2G32080.1 | Symbols: PUR ALPHA-1 | purin-rich alpha 1 | chr2:1...   266   3e-72

>AT2G32080.2 | Symbols: PUR ALPHA-1 | purin-rich alpha 1 |
           chr2:13642716-13644036 REVERSE LENGTH=295
          Length = 295

 Score =  266 bits (681), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 128/140 (91%), Positives = 135/140 (96%)

Query: 19  DVELLCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYV 78
           DVEL+ KTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVP SGISWFLDLFNYYV
Sbjct: 28  DVELVSKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYV 87

Query: 79  NSDDQDLFSKELQLDTKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSSRDEGWAA 138
           NS++ +LFSKELQLD+KVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSS DEGWAA
Sbjct: 88  NSEEHELFSKELQLDSKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSSPDEGWAA 147

Query: 139 FRNILAEINEASRLFIMPNQ 158
           FRNILAEI+EAS LF+MPNQ
Sbjct: 148 FRNILAEIHEASGLFVMPNQ 167



 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 37/56 (66%)

Query: 23  LCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYV 78
           + K ++ + K F+FDL  N RG +L+ISE   + RS+II+P SG+  F ++  ++V
Sbjct: 217 VSKVIRADQKRFFFDLGNNNRGHFLRISEVAGSDRSSIILPLSGLKQFHEVIGHFV 272


>AT2G32080.1 | Symbols: PUR ALPHA-1 | purin-rich alpha 1 |
           chr2:13642716-13644036 REVERSE LENGTH=296
          Length = 296

 Score =  266 bits (681), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 128/140 (91%), Positives = 135/140 (96%)

Query: 19  DVELLCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYV 78
           DVEL+ KTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVP SGISWFLDLFNYYV
Sbjct: 28  DVELVSKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYV 87

Query: 79  NSDDQDLFSKELQLDTKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSSRDEGWAA 138
           NS++ +LFSKELQLD+KVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSS DEGWAA
Sbjct: 88  NSEEHELFSKELQLDSKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSSPDEGWAA 147

Query: 139 FRNILAEINEASRLFIMPNQ 158
           FRNILAEI+EAS LF+MPNQ
Sbjct: 148 FRNILAEIHEASGLFVMPNQ 167



 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 37/56 (66%)

Query: 23  LCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYV 78
           + K ++ + K F+FDL  N RG +L+ISE   + RS+II+P SG+  F ++  ++V
Sbjct: 218 VSKVIRADQKRFFFDLGNNNRGHFLRISEVAGSDRSSIILPLSGLKQFHEVIGHFV 273