Miyakogusa Predicted Gene

Lj0g3v0068279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068279.1 Non Chatacterized Hit- tr|H9WV19|H9WV19_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,59.02,0.0000000001,seg,NULL,
NODE_2536_length_1224_cov_287.145416.path1.1
         (247 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G07990.1 | Symbols:  | SIT4 phosphatase-associated family pro...   140   1e-33
AT2G28360.1 | Symbols:  | SIT4 phosphatase-associated family pro...   136   2e-32
AT3G45190.1 | Symbols:  | SIT4 phosphatase-associated family pro...   107   1e-23

>AT1G07990.1 | Symbols:  | SIT4 phosphatase-associated family
           protein | chr1:2477413-2482898 FORWARD LENGTH=802
          Length = 802

 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/204 (44%), Positives = 118/204 (57%), Gaps = 31/204 (15%)

Query: 45  DFISGSTDSNSMNGGAMNFESENTSASHDTGFFRFEASDK-EGSYGDRPMPDWVGWGEPS 103
           D ++G+   N++N    NF+ E+        FF F  S K E ++ ++P P+WVGWGEPS
Sbjct: 629 DDLTGNPKDNALNTTETNFQMESP-----LDFFDFNTSQKAEEAFAEQP-PEWVGWGEPS 682

Query: 104 DMQVGNSSTNPFVDHDESGNNLSSKPELGXXXXXXXXXGETVSSNGLPSTIDSMEGIVES 163
           DMQ   +  NPF+D D+      SK  +           E++  NG              
Sbjct: 683 DMQASGTGLNPFIDDDDDD---DSKHIMNLDIPMAEVKSESMIPNG-------------- 725

Query: 164 SQRSGAVPSLFEEDVEFVGVELEGTEKAMDQALKEGIVGEAGPLKRNMVPKVAEKENSEE 223
           S+RS     LFE+DVEFVGVE EG EKAM+QA+KEGIVGEAG +K+N   ++AE    EE
Sbjct: 726 SERS-----LFEKDVEFVGVEPEGAEKAMEQAMKEGIVGEAGVMKKN--KEMAEDSKPEE 778

Query: 224 GGAGVKEFNDTNYWRVDQEVAVLE 247
              GVKEFND NYW+VDQEV VLE
Sbjct: 779 SSGGVKEFNDNNYWKVDQEVGVLE 802


>AT2G28360.1 | Symbols:  | SIT4 phosphatase-associated family
           protein | chr2:12124604-12129879 REVERSE LENGTH=788
          Length = 788

 Score =  136 bits (342), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/147 (56%), Positives = 91/147 (61%), Gaps = 19/147 (12%)

Query: 101 EPSDMQVGNSSTNPFVDHDESGNNLSSKPELGXXXXXXXXXGETVSSNGLPSTIDSMEGI 160
           EPSDMQV +SS NPF+D       L  KPE             +   +  PS        
Sbjct: 661 EPSDMQVTSSSLNPFID----VPMLDVKPEPVIPNSSPTSSESSSLGHKSPS-------- 708

Query: 161 VESSQRSGAVPSLFEEDVEFVGVELEGTEKAMDQALKEGIVGEAGPLKRNMVPKVAEKEN 220
                 S AV +LFEEDVEFVGVE EGTEKAMDQALKEGIVGEAGPLKRN+V KV E EN
Sbjct: 709 ------SPAVRALFEEDVEFVGVEPEGTEKAMDQALKEGIVGEAGPLKRNIVQKVPENEN 762

Query: 221 SEEGGAGVKEFNDTNYWRVDQEVAVLE 247
             E  +GV EFND N+WRVDQEV VLE
Sbjct: 763 QAE-NSGVTEFNDANFWRVDQEVTVLE 788


>AT3G45190.1 | Symbols:  | SIT4 phosphatase-associated family
           protein | chr3:16541994-16548161 REVERSE LENGTH=789
          Length = 789

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/82 (65%), Positives = 65/82 (79%), Gaps = 3/82 (3%)

Query: 166 RSGAVPSLFEEDVEFVGVELEGTEKAMDQALKEGIVGEAGPLKRNMVPKVAEKENSEEGG 225
           RS  VPSLF +DVEFVGVE EGTE+AMDQALKEGIVGEAGP+KRN       KE+ ++  
Sbjct: 711 RSPPVPSLFGKDVEFVGVEPEGTERAMDQALKEGIVGEAGPMKRNTTTASPGKESPDD-- 768

Query: 226 AGVKEFNDTNYWRVDQEVAVLE 247
             ++E+NDTNYW+VDQEV V+E
Sbjct: 769 -SMQEYNDTNYWKVDQEVTVVE 789