Miyakogusa Predicted Gene

Lj0g3v0067879.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0067879.1 Non Chatacterized Hit- tr|B9RPI9|B9RPI9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,60.26,0.000000000000002,coiled-coil,NULL; seg,NULL,CUFF.3444.1
         (443 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50910.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   274   8e-74
AT5G66480.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   194   8e-50

>AT3G50910.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G66480.1); Has 76 Blast hits to 75 proteins in
           28 species: Archae - 0; Bacteria - 10; Metazoa - 7;
           Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes -
           8 (source: NCBI BLink). | chr3:18920189-18921999 FORWARD
           LENGTH=447
          Length = 447

 Score =  274 bits (701), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 182/452 (40%), Positives = 266/452 (58%), Gaps = 36/452 (7%)

Query: 1   MPTFTAIAFDRLIEPGASKPAARRSASTSM--PGPNARKLGR-RTSEPTAPSVSKKPPPR 57
           MPTF+AIA DR++EPGAS       ++T++    P   KL + +   P   +V+     R
Sbjct: 1   MPTFSAIALDRMLEPGASTSVESVPSTTNLFYSKPPISKLEKGKGKLPNERTVT-----R 55

Query: 58  PQLKPSLYATPEVTPLPDAPSSFPPSPYIVNHKRRGP-RLLKSFSEADV--QAKQEVHED 114
           P + P+LYATP+  PLP++PSSFPPSPYI+NHK RGP RLLKS SEA+V   + Q+  E+
Sbjct: 56  PLMSPALYATPDAIPLPNSPSSFPPSPYIINHKSRGPPRLLKSSSEANVVSSSHQKTLEE 115

Query: 115 ENXXXXXXXXXX------------XXXAGDLQVTVMNAEPVNEEQVTGALDTKLSSCNGS 162
           E                            D     ++A  V      G +D  + + +  
Sbjct: 116 ETITAETDVKVSPRRRSTSFSFPITEVTEDDYSNGVHARTVGNYNFDGIVDGPVGNWSPL 175

Query: 163 DLEHGCRENELSSSITNGTHVEKVGALN------SERDVESDDFFDPQDSMSVTSYTDGE 216
           D + G  ++EL ++  NG  +E+V  L+      ++++ ES+DF+DP +S S TS TD E
Sbjct: 176 DGKSGNGKSELDNA-ANG--LERVNGLSEPVPIKTDKESESEDFYDPGESASFTSNTDVE 232

Query: 217 DNTGTERGVKLSTPGGEFFDAWEELSSDGGTQNSLRDVDAXXXXXXXXXXXXXXKRKQVE 276
            + G E   +L+TP GEF+DAW+ELS+D G Q+S+ ++++              KRKQ E
Sbjct: 233 GDAGDESSQRLATPVGEFYDAWDELSTDSGMQSSVNNIESELSEIRLSLLMEIEKRKQTE 292

Query: 277 ESLNSMRSQWERIRKEFSLVGIVLPADLTAIADGEQLSSDCVGDIRQQVHTARFISNAIG 336
           E+L  M+  W+R+R++ + VG+ +P D TA  +   LS +    +R Q+  ARF+S+++G
Sbjct: 293 EALEQMQIHWQRLREQMAQVGLFVPIDPTASTNNMNLSEE----LRCQLEIARFVSDSLG 348

Query: 337 RGTARAEVEMEMEAQLESKNFEISRLLERLHCYETMNREMSQRNQEAVEMAXXXXXXXXX 396
           RG A+AEVEMEME+ LE+KNFEI+RL +RLH YE +NREMSQRNQEA+E+A         
Sbjct: 349 RGMAKAEVEMEMESMLETKNFEITRLSDRLHYYEAVNREMSQRNQEAIEVARRERQKRKK 408

Query: 397 XXXXXXGSVTTAIVLGTAAIAWSYLPTGKGST 428
                 GS+   I LG+AA+AWSY+P  K S+
Sbjct: 409 RQRWIWGSIAATITLGSAALAWSYIPAAKPSS 440


>AT5G66480.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT3G50910.1); Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr5:26544737-26546476 REVERSE LENGTH=444
          Length = 444

 Score =  194 bits (494), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 150/445 (33%), Positives = 231/445 (51%), Gaps = 30/445 (6%)

Query: 1   MPTFTAIAFDRLIEPGASKPAARRSASTSMPGPNARKLGRRTSEPTAPSVSKKPPPRPQL 60
           MPTF+A A  R +  G S  +   S   S P      L   + +P   + +     RPQ+
Sbjct: 1   MPTFSAAALGRSLNSGTSLSSKFPSTLQSKPS----ILNDESKQPKEKTFT-----RPQM 51

Query: 61  KPSLYATPEVTPLPDAPSSFPPSPYIVNHKRRGPRLLKSFSEADVQAKQEVHEDENXXXX 120
            PSLYAT +  P P++PSS+PPSPYI+NHK RGP L    SE D  +      +E     
Sbjct: 52  SPSLYATTKEIPHPNSPSSYPPSPYIINHKARGPVLFNRDSEVDGPSHPITSGEEKISGN 111

Query: 121 XXXXXXXXXAGDLQVTVMNAEPVNEEQVTGA----------------LDTKLSSCNGSDL 164
                    +    ++    E +  +   G                 L T L+  +G D+
Sbjct: 112 VDVEATASLSKSTSLSFPITEAIAVDHTNGVHTQGIHERPVWDCSPPLGTFLNEKSGRDI 171

Query: 165 EHG-CRENELSSSITNGTHVEKVGALNSERDVESDDFFDPQDSMSVTSYTDGEDNTGTER 223
            +G    N  +S++   +++ +   + +++++E ++F++P + +S TS T+ ED    E 
Sbjct: 172 SNGGIGSNNATSNLEWQSYLLEPVRIKADKELEPENFYNPGELVSFTSNTEVEDFERAES 231

Query: 224 GVKLSTPGGEFFDAWEELSSDGGTQNSLRDVDAXXXXXXXXXXXXXXKRKQVEESLNSMR 283
              L+T  GEF+DA +ELS+D G Q+S  ++++              +R+Q E +L  M+
Sbjct: 232 SHSLATHVGEFYDACDELSTDSGMQSSANNIESEVREMRLGLLMEIERRRQAEATLEQMQ 291

Query: 284 SQWERIRKEFSLVGIVLPADLTAIADGEQLSSDCVGDIRQQVHTARFISNAIGRGTARAE 343
             W R+R + + VG+ LP D T      Q S +   ++R Q+   RF+S+ +G   A+ E
Sbjct: 292 VHWRRLRDQLADVGMFLPLDPTR----SQYSMNLADELRCQLEVTRFVSDTLGSDLAKTE 347

Query: 344 VEMEMEAQLESKNFEISRLLERLHCYETMNREMSQRNQEAVEMAXXXXXXXXXXXXXXXG 403
           VEMEMEA+LE+KNFEI+RL +RLH YET+N+EMSQRNQEA+E+A               G
Sbjct: 348 VEMEMEAELEAKNFEITRLSDRLHYYETVNQEMSQRNQEAIEVARRDGQKRKRRQRWIWG 407

Query: 404 SVTTAIVLGTAAIAWSYLPTGKGST 428
           S+   I LG+  +AWSYLP G  S+
Sbjct: 408 SIAATITLGSGVLAWSYLPPGMLSS 432