Miyakogusa Predicted Gene

Lj0g3v0067789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0067789.1 tr|Q9C9I0|Q9C9I0_ARATH At1g71430 OS=Arabidopsis
thaliana GN=F26A9.19 PE=2 SV=1,55.26,5e-19,seg,NULL,CUFF.3218.1
         (192 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G71430.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   100   8e-22

>AT1G71430.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 13 growth stages; Has 64
           Blast hits to 64 proteins in 28 species: Archae - 0;
           Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42;
           Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
           | chr1:26920564-26921058 FORWARD LENGTH=164
          Length = 164

 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 6/113 (5%)

Query: 3   ERSKELLQLEHKGMPLSS-IESTLLVCDGKRESNPKTKTLPRNGTPLTAPVQPSQLLGKV 61
           E  K+LL+LE K    SS ++S LL+C  K +   K +  P    P  APV  SQLLGK+
Sbjct: 5   ENCKDLLKLELKNPSSSSAMDSALLMCTDKNKKKKKMEA-PPPSKPTIAPVPKSQLLGKL 63

Query: 62  KDFLGVMSEANKRLELDAKDHPENYNIEELTGNETKVIEMDLMLGVADLHTPE 114
           K FLGVM+EANK+ E     +PE YNIE LTGNE+++IEMDLMLGVADL+TPE
Sbjct: 64  KGFLGVMAEANKKSE----ANPEAYNIEALTGNESELIEMDLMLGVADLNTPE 112