Miyakogusa Predicted Gene

Lj0g3v0066429.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0066429.2 tr|D5C1T7|D5C1T7_NITHN Transaldolase
OS=Nitrosococcus halophilus (strain Nc4) GN=Nhal_1585 PE=3
SV=1,48.81,2e-16,no description,Aldolase-type TIM barrel;
Transaldolase,Transaldolase; Aldolase,NULL,CUFF.3123.2
         (98 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13420.1 | Symbols:  | Aldolase-type TIM barrel family protei...   131   1e-31

>AT5G13420.1 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr5:4302080-4304212 REVERSE LENGTH=438
          Length = 438

 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 60/89 (67%), Positives = 71/89 (79%)

Query: 1   MRASINVKNPAYPDTSYVESLIGPDTISTMPSQAFQAFMDHGVLSRTIDTKVSEAQGIYN 60
           + AS +VKNPAY DT YV  LIGPDT+STMP QA +AF DHG++ RTID  VSEA+GIY+
Sbjct: 332 LWASTSVKNPAYSDTLYVAPLIGPDTVSTMPDQALEAFADHGIVKRTIDANVSEAEGIYS 391

Query: 61  AIEKLGIDWNAVGSQLEHEVIDSFTKSLQ 89
           A+EKLGIDWN VG QLE E +DSF KS +
Sbjct: 392 ALEKLGIDWNKVGEQLEDEGVDSFKKSFE 420