Miyakogusa Predicted Gene

Lj0g3v0066429.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0066429.1 tr|G4IS83|G4IS83_9RHIZ Transaldolase
OS=Hyphomicrobium denitrificans 1NES1 GN=tal PE=3 SV=1,46.79,3e-19,no
description,Aldolase-type TIM barrel; Transaldolase,Transaldolase;
Aldolase,NULL,CUFF.3123.1
         (118 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13420.1 | Symbols:  | Aldolase-type TIM barrel family protei...   164   9e-42

>AT5G13420.1 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr5:4302080-4304212 REVERSE LENGTH=438
          Length = 438

 Score =  164 bits (416), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 75/108 (69%), Positives = 88/108 (81%)

Query: 2   FSGPRWERLERRGAKKQRLMRASINVKNPAYPDTSYVESLIGPDTISTMPSQAFQAFMDH 61
           FSGPRWE L ++GAKKQRL+ AS +VKNPAY DT YV  LIGPDT+STMP QA +AF DH
Sbjct: 313 FSGPRWEALVKKGAKKQRLLWASTSVKNPAYSDTLYVAPLIGPDTVSTMPDQALEAFADH 372

Query: 62  GVLSRTIDTKVSEAQGIYNAIEKLGIDWNAVGSQLEHEVIDSFTKSLQ 109
           G++ RTID  VSEA+GIY+A+EKLGIDWN VG QLE E +DSF KS +
Sbjct: 373 GIVKRTIDANVSEAEGIYSALEKLGIDWNKVGEQLEDEGVDSFKKSFE 420