Miyakogusa Predicted Gene
- Lj0g3v0066389.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0066389.1 Non Chatacterized Hit- tr|B9FPU0|B9FPU0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,33.94,5e-17,seg,NULL; Protein kinase-like (PK-like),Protein
kinase-like domain; no description,NULL,CUFF.3118.1
(758 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G44200.1 | Symbols: ATNEK6, NEK6, IBO1 | NIMA (never in mitos... 275 8e-74
AT3G20860.1 | Symbols: ATNEK5, NEK5 | NIMA-related kinase 5 | ch... 60 5e-09
AT1G54510.3 | Symbols: NEK1 | NIMA-related serine/threonine kina... 57 4e-08
AT1G54510.2 | Symbols: NEK1 | NIMA-related serine/threonine kina... 57 4e-08
AT1G54510.1 | Symbols: ATNEK1, NEK1 | NIMA-related serine/threon... 57 4e-08
AT3G63280.2 | Symbols: ATNEK4, NEK4 | NIMA-related kinase 4 | ch... 55 1e-07
AT3G63280.1 | Symbols: ATNEK4, NEK4 | NIMA-related kinase 4 | ch... 55 1e-07
AT3G04810.2 | Symbols: ATNEK2, NEK2 | NIMA-related kinase 2 | ch... 55 2e-07
AT3G04810.1 | Symbols: ATNEK2, NEK2 | NIMA-related kinase 2 | ch... 55 2e-07
AT5G28290.1 | Symbols: ATNEK3, NEK3 | NIMA-related kinase 3 | ch... 52 1e-06
>AT3G44200.1 | Symbols: ATNEK6, NEK6, IBO1 | NIMA (never in mitosis,
gene A)-related 6 | chr3:15906788-15911365 FORWARD
LENGTH=956
Length = 956
Score = 275 bits (703), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 262/771 (33%), Positives = 374/771 (48%), Gaps = 93/771 (12%)
Query: 15 KTLIRGMLRKNPEHRPTASEILKHPYLQPYVHQYRSSFCSPTASSPEKLISAAHGSQKNM 74
K LI+GMLRKNPE+RP ASEILKHPYLQPYV QYR + S + +PEK +++ G +++M
Sbjct: 236 KALIKGMLRKNPEYRPNASEILKHPYLQPYVEQYRPTL-SAASITPEKPLNSREG-RRSM 293
Query: 75 AGXXXXXXXXXXXXXXXXNERNITKAVPKCESETTEAXXXXXXXXXXXXXXXXXXXXXXX 134
A +++NI VP ++ TE
Sbjct: 294 A-ESQNSNSSSEKDNFYVSDKNIRYVVPSNGNKVTETDSGFVDDEDILDHVQQSAENGNL 352
Query: 135 N--VNTKTDKQEVMKQTHKERHSNAVF-KQPKKTKNIVMALKDEKVRETSSPLRSNRIKA 191
TK D ++K H ++ + + + PK +NI+M LK+EK RE SP+RSNR +
Sbjct: 353 QSVSATKPDGHGILKPVHSDQRPDVIQPRHPKTIRNIMMVLKEEKARENGSPMRSNRSRP 412
Query: 192 GGVSTQKINTETETPSKLPKPNFGVSALKPNLDVATDA-PSKATPDSAKQMQGRHTSKHQ 250
V TQK N ETPSK+PK G A + +T PSK DSA+ G KH
Sbjct: 413 SSVPTQKNN--VETPSKIPK--LGDIAHSSKTNASTPIPPSKLASDSAR-TPGSFPPKHH 467
Query: 251 LPVINSTPKNRPRYNVTSSGP-IKHIEDHGVPIRSKQKTPPSSLKPPSFPGRM-RQAGLD 308
+PVI+S+PK +PR + S P KH + + ++ +Q+TPP+ + S RQ G D
Sbjct: 468 MPVIDSSPKLKPRNDRISPSPAAKHEAEEAMSVKRRQRTPPTLPRRTSLIAHQSRQLGAD 527
Query: 309 NPNV-ANDTGKSSQNKIAQEAKMSHQQLTNGHPQHISKEFTREPLKAFESSSKGIETKXX 367
N+ A +T K + ++ SHQ + P T EP + S+KG++++
Sbjct: 528 ISNMAAKETAKLHPSVPSESETNSHQSRVHASPVST----TPEPKRTSVGSAKGMQSESS 583
Query: 368 XXXXXXXXIQGFELSDFATT-FIDLSAPMLP-DHECSNHPENVESHPNSSSPPQNLSGET 425
+Q FEL D A+T +ID++ P DH S H E S P+ SS
Sbjct: 584 NSISSSLSMQAFELCDDASTPYIDMTEHTTPDDHRRSCHSEYSYSFPDISS--------- 634
Query: 426 SLLTPNFRHATITSIEKVSPSLTLDHSVQDSQVKFASDDSFLRNQTTTPAASGCDKRSVD 485
++ H+T + ++ S++ VQ++ + R Q + P D +
Sbjct: 635 EMMIRRDEHSTSMRLTEIPDSVS---GVQNTIAHHQPE----REQGSCPTVLKDDSPATL 687
Query: 486 PSAEVTPQIKELQNISEEMTSTKSLKHQLPSVAETATQII-STKISSQKVLQEEKETVL- 543
S E P + Q+ ++ T K +P A + S +++S + K +V+
Sbjct: 688 QSYE--PNTSQHQHGDDKFT-VKEFVSSVPGPAPLPLHVEPSHQVNSH---SDNKTSVMS 741
Query: 544 QNPAPEKPAS-GHLPPAFDDVIHVIRHSSYRMGSEL-VKESV---VQNVDVGKFINIARD 598
QN A EK S H P DDVIHVIRHSS+R+GS+ V ESV VQNVD+GK IN+ RD
Sbjct: 742 QNSALEKNNSHSHPHPVVDDVIHVIRHSSFRVGSDQPVMESVEVGVQNVDMGKLINVVRD 801
Query: 599 NSETRKVKSNCSEATNSESNISDNLEIRNLSTPKSPNVXXXXXXXXXXXXXXXXXHPSVK 658
E RK + SE+ + S IS+ + R PK P+
Sbjct: 802 EMEVRK-GATPSESPTTRSIISEP-DSRTEPRPKEPD----------------------- 836
Query: 659 KQDVKTPDTLLSKSDS-TGCTKFNPPTT-----------AEEAPVKETLDVKSSTQRXXX 706
P T S++ S C+ +P T PVKETLD+KS QR
Sbjct: 837 ------PITNYSETKSFNSCSDSSPAETRTNSFVPEEETTPTPPVKETLDIKSFRQRAEA 890
Query: 707 XXXXXXXXXXXXQQNRLEELSIVLKPFGKDKVSPRETAIWLAKSLKGLMVD 757
+Q+RLEEL+IVL+PFGK+KVSPRETAIWLAKSLKG+M++
Sbjct: 891 LEGLLELSADLLEQSRLEELAIVLQPFGKNKVSPRETAIWLAKSLKGMMIE 941
>AT3G20860.1 | Symbols: ATNEK5, NEK5 | NIMA-related kinase 5 |
chr3:7306147-7308434 FORWARD LENGTH=427
Length = 427
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 30/33 (90%)
Query: 15 KTLIRGMLRKNPEHRPTASEILKHPYLQPYVHQ 47
K LI+ MLRKNPEHRPTA+E+L+HP+LQPY+ Q
Sbjct: 242 KRLIKSMLRKNPEHRPTAAELLRHPHLQPYLAQ 274
>AT1G54510.3 | Symbols: NEK1 | NIMA-related serine/threonine kinase
1 | chr1:20358603-20362006 REVERSE LENGTH=612
Length = 612
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%)
Query: 695 LDVKSSTQRXXXXXXXXXXXXXXXQQNRLEELSIVLKPFGKDKVSPRETAIWLAKSLK 752
D S QR Q+ R +EL+++LKPFG KVSPRETAIW+AKSLK
Sbjct: 532 FDPSSYRQRADALEGLLEFSARLLQEGRYDELNVLLKPFGPGKVSPRETAIWIAKSLK 589
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 29/34 (85%)
Query: 12 APRKTLIRGMLRKNPEHRPTASEILKHPYLQPYV 45
P + L++ MLRKNPE RP+AS++L+HP+LQPYV
Sbjct: 229 GPFRGLVKSMLRKNPEVRPSASDLLRHPHLQPYV 262
>AT1G54510.2 | Symbols: NEK1 | NIMA-related serine/threonine kinase
1 | chr1:20358603-20362006 REVERSE LENGTH=612
Length = 612
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%)
Query: 695 LDVKSSTQRXXXXXXXXXXXXXXXQQNRLEELSIVLKPFGKDKVSPRETAIWLAKSLK 752
D S QR Q+ R +EL+++LKPFG KVSPRETAIW+AKSLK
Sbjct: 532 FDPSSYRQRADALEGLLEFSARLLQEGRYDELNVLLKPFGPGKVSPRETAIWIAKSLK 589
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 29/34 (85%)
Query: 12 APRKTLIRGMLRKNPEHRPTASEILKHPYLQPYV 45
P + L++ MLRKNPE RP+AS++L+HP+LQPYV
Sbjct: 229 GPFRGLVKSMLRKNPEVRPSASDLLRHPHLQPYV 262
>AT1G54510.1 | Symbols: ATNEK1, NEK1 | NIMA-related serine/threonine
kinase 1 | chr1:20358603-20362006 REVERSE LENGTH=612
Length = 612
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%)
Query: 695 LDVKSSTQRXXXXXXXXXXXXXXXQQNRLEELSIVLKPFGKDKVSPRETAIWLAKSLK 752
D S QR Q+ R +EL+++LKPFG KVSPRETAIW+AKSLK
Sbjct: 532 FDPSSYRQRADALEGLLEFSARLLQEGRYDELNVLLKPFGPGKVSPRETAIWIAKSLK 589
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 29/34 (85%)
Query: 12 APRKTLIRGMLRKNPEHRPTASEILKHPYLQPYV 45
P + L++ MLRKNPE RP+AS++L+HP+LQPYV
Sbjct: 229 GPFRGLVKSMLRKNPEVRPSASDLLRHPHLQPYV 262
>AT3G63280.2 | Symbols: ATNEK4, NEK4 | NIMA-related kinase 4 |
chr3:23378582-23381362 FORWARD LENGTH=555
Length = 555
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%)
Query: 695 LDVKSSTQRXXXXXXXXXXXXXXXQQNRLEELSIVLKPFGKDKVSPRETAIWLAKSLK 752
D S QR QQ R +EL ++LKPFG ++VS RETAIWL KS K
Sbjct: 494 FDTSSYQQRAEALEGLLEFSAKLLQQERYDELGVLLKPFGAERVSSRETAIWLTKSFK 551
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 15 KTLIRGMLRKNPEHRPTASEILKHPYLQPYVHQYRSSFCSPTASS 59
+ LI+ MLRKNPE RP+A+E+L HP+LQPY+ SP S+
Sbjct: 232 RGLIKSMLRKNPELRPSANELLNHPHLQPYISMVYMKLESPRRST 276
>AT3G63280.1 | Symbols: ATNEK4, NEK4 | NIMA-related kinase 4 |
chr3:23378582-23381362 FORWARD LENGTH=555
Length = 555
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%)
Query: 695 LDVKSSTQRXXXXXXXXXXXXXXXQQNRLEELSIVLKPFGKDKVSPRETAIWLAKSLK 752
D S QR QQ R +EL ++LKPFG ++VS RETAIWL KS K
Sbjct: 494 FDTSSYQQRAEALEGLLEFSAKLLQQERYDELGVLLKPFGAERVSSRETAIWLTKSFK 551
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 15 KTLIRGMLRKNPEHRPTASEILKHPYLQPYVHQYRSSFCSPTASS 59
+ LI+ MLRKNPE RP+A+E+L HP+LQPY+ SP S+
Sbjct: 232 RGLIKSMLRKNPELRPSANELLNHPHLQPYISMVYMKLESPRRST 276
>AT3G04810.2 | Symbols: ATNEK2, NEK2 | NIMA-related kinase 2 |
chr3:1318096-1321101 FORWARD LENGTH=606
Length = 606
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 692 KETLDVKSSTQRXXXXXXXXXXXXXXXQQNRLEELSIVLKPFGKDKVSPRETAIWLAKSL 751
++ D S QR Q R +EL+++L+PFG KVSPRETAIWL+KS
Sbjct: 537 RQRFDPSSYQQRAEALEGLLEFSARLLQDERYDELNVLLRPFGPGKVSPRETAIWLSKSF 596
Query: 752 K 752
K
Sbjct: 597 K 597
>AT3G04810.1 | Symbols: ATNEK2, NEK2 | NIMA-related kinase 2 |
chr3:1318096-1321101 FORWARD LENGTH=606
Length = 606
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 692 KETLDVKSSTQRXXXXXXXXXXXXXXXQQNRLEELSIVLKPFGKDKVSPRETAIWLAKSL 751
++ D S QR Q R +EL+++L+PFG KVSPRETAIWL+KS
Sbjct: 537 RQRFDPSSYQQRAEALEGLLEFSARLLQDERYDELNVLLRPFGPGKVSPRETAIWLSKSF 596
Query: 752 K 752
K
Sbjct: 597 K 597
>AT5G28290.1 | Symbols: ATNEK3, NEK3 | NIMA-related kinase 3 |
chr5:10278880-10281880 REVERSE LENGTH=568
Length = 568
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 722 RLEELSIVLKPFGKDKVSPRETAIWLAKSLK 752
R +EL+++LKPFG KVSPRETAIWL+KS K
Sbjct: 528 RYDELNVLLKPFGPGKVSPRETAIWLSKSFK 558