Miyakogusa Predicted Gene

Lj0g3v0065769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0065769.1 tr|D8TT90|D8TT90_VOLCA Inner membrane
ALBINO3-like protein 2, chloroplast (Fragment) OS=Volvox
carte,57.75,3e-17,INNER MEMBRANE ALBINO3-LIKE PROTEIN 1, 2,
CHLOROPLAST,NULL; OXA1,Membrane insertase OXA1/ALB3/YidC; ,CUFF.3066.1
         (186 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G24490.1 | Symbols: ALB4, ARTEMIS | OxaA/YidC-like membrane i...   175   1e-44
AT2G28800.2 | Symbols: ALB3 | 63 kDa inner membrane family prote...   149   2e-36
AT2G28800.1 | Symbols: ALB3 | 63 kDa inner membrane family prote...   149   2e-36
AT2G28800.4 | Symbols: ALB3 | 63 kDa inner membrane family prote...   149   2e-36
AT2G28800.3 | Symbols: ALB3 | 63 kDa inner membrane family prote...   148   2e-36
AT1G24490.2 | Symbols: ALB4, ARTEMIS | OxaA/YidC-like membrane i...    87   7e-18

>AT1G24490.1 | Symbols: ALB4, ARTEMIS | OxaA/YidC-like membrane
           insertion protein | chr1:8682364-8684966 FORWARD
           LENGTH=499
          Length = 499

 Score =  175 bits (444), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 84/110 (76%), Positives = 94/110 (85%)

Query: 76  AEGFLYTVADAAVPSSDTAGXXXXXXXLHNQNNDWFSGIANYMETVLKILKDGLSSVHVP 135
           AE  LYT+ADAAV SS+T            Q+NDWFSGIANYMET+LK+LKDGLS+VHVP
Sbjct: 62  AENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILKVLKDGLSTVHVP 121

Query: 136 YAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAIQQRYAGDQ 185
           Y+YGFAIILLTVLVKAATFPLTKKQVESAMAM++L PQIKAIQ+RYAGDQ
Sbjct: 122 YSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQ 171


>AT2G28800.2 | Symbols: ALB3 | 63 kDa inner membrane family protein
           | chr2:12357419-12359158 REVERSE LENGTH=348
          Length = 348

 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 91/117 (77%), Gaps = 2/117 (1%)

Query: 69  IRELFTRAEGFLYTVADAAVPSSDTAGXXXXXXXLHNQNNDWFSGIANYMETVLKILKDG 128
           I  +FTRAE  LYT+ADAAV  +D+            ++  WF  I++ ME VLKILKDG
Sbjct: 73  IGAIFTRAESLLYTIADAAVVGADSVVTTDSSAV--QKSGGWFGFISDAMELVLKILKDG 130

Query: 129 LSSVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAIQQRYAGDQ 185
           LS+VHVPYAYGFAIILLT++VKAAT+PLTK+QVES +AM+ LQP+IKAIQQRYAG+Q
Sbjct: 131 LSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQ 187


>AT2G28800.1 | Symbols: ALB3 | 63 kDa inner membrane family protein
           | chr2:12356669-12359158 REVERSE LENGTH=462
          Length = 462

 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 91/117 (77%), Gaps = 2/117 (1%)

Query: 69  IRELFTRAEGFLYTVADAAVPSSDTAGXXXXXXXLHNQNNDWFSGIANYMETVLKILKDG 128
           I  +FTRAE  LYT+ADAAV  +D+            ++  WF  I++ ME VLKILKDG
Sbjct: 73  IGAIFTRAESLLYTIADAAVVGADSVVTTDSSAV--QKSGGWFGFISDAMELVLKILKDG 130

Query: 129 LSSVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAIQQRYAGDQ 185
           LS+VHVPYAYGFAIILLT++VKAAT+PLTK+QVES +AM+ LQP+IKAIQQRYAG+Q
Sbjct: 131 LSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQ 187


>AT2G28800.4 | Symbols: ALB3 | 63 kDa inner membrane family protein
           | chr2:12356669-12359158 REVERSE LENGTH=432
          Length = 432

 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 91/117 (77%), Gaps = 2/117 (1%)

Query: 69  IRELFTRAEGFLYTVADAAVPSSDTAGXXXXXXXLHNQNNDWFSGIANYMETVLKILKDG 128
           I  +FTRAE  LYT+ADAAV  +D+            ++  WF  I++ ME VLKILKDG
Sbjct: 73  IGAIFTRAESLLYTIADAAVVGADSVVTTDSSAV--QKSGGWFGFISDAMELVLKILKDG 130

Query: 129 LSSVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAIQQRYAGDQ 185
           LS+VHVPYAYGFAIILLT++VKAAT+PLTK+QVES +AM+ LQP+IKAIQQRYAG+Q
Sbjct: 131 LSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQ 187


>AT2G28800.3 | Symbols: ALB3 | 63 kDa inner membrane family protein
           | chr2:12357133-12359158 REVERSE LENGTH=342
          Length = 342

 Score =  148 bits (374), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 91/117 (77%), Gaps = 2/117 (1%)

Query: 69  IRELFTRAEGFLYTVADAAVPSSDTAGXXXXXXXLHNQNNDWFSGIANYMETVLKILKDG 128
           I  +FTRAE  LYT+ADAAV  +D+            ++  WF  I++ ME VLKILKDG
Sbjct: 73  IGAIFTRAESLLYTIADAAVVGADSVVTTDSSAV--QKSGGWFGFISDAMELVLKILKDG 130

Query: 129 LSSVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAIQQRYAGDQ 185
           LS+VHVPYAYGFAIILLT++VKAAT+PLTK+QVES +AM+ LQP+IKAIQQRYAG+Q
Sbjct: 131 LSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQ 187


>AT1G24490.2 | Symbols: ALB4, ARTEMIS | OxaA/YidC-like membrane
           insertion protein | chr1:8682364-8684966 FORWARD
           LENGTH=462
          Length = 462

 Score = 87.0 bits (214), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 57/110 (51%), Gaps = 37/110 (33%)

Query: 76  AEGFLYTVADAAVPSSDTAGXXXXXXXLHNQNNDWFSGIANYMETVLKILKDGLSSVHVP 135
           AE  LYT+ADAAV SS+T            Q+NDWFSGIANYMET+LK            
Sbjct: 62  AENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILK------------ 109

Query: 136 YAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAIQQRYAGDQ 185
                                    VESAMAM++L PQIKAIQ+RYAGDQ
Sbjct: 110 -------------------------VESAMAMKSLTPQIKAIQERYAGDQ 134