Miyakogusa Predicted Gene

Lj0g3v0065739.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0065739.2 Non Chatacterized Hit- tr|I1HH80|I1HH80_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,49.51,5e-19,seg,NULL; HMA_2,Heavy metal-associated domain, HMA; GB
DEF: HYPOTHETICAL PROTEIN AT2G37390,NULL; COP,CUFF.3058.2
         (230 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37390.1 | Symbols: NAKR2 | Chloroplast-targeted copper chape...    98   5e-21
AT3G53530.1 | Symbols: NAKR3 | Chloroplast-targeted copper chape...    96   1e-20
AT2G37390.2 | Symbols: NAKR2 | Chloroplast-targeted copper chape...    96   2e-20
AT3G53530.2 | Symbols: NAKR3 | Chloroplast-targeted copper chape...    92   4e-19
AT5G02600.1 | Symbols: NAKR1 | Heavy metal transport/detoxificat...    91   5e-19
AT5G02600.2 | Symbols: NAKR1 | Heavy metal transport/detoxificat...    91   5e-19
AT2G28660.1 | Symbols:  | Chloroplast-targeted copper chaperone ...    91   9e-19
AT3G24450.1 | Symbols:  | Heavy metal transport/detoxification s...    64   7e-11
AT1G66240.1 | Symbols: ATX1, ATATX1 | homolog of anti-oxidant 1 ...    62   5e-10
AT3G56240.1 | Symbols: CCH | copper chaperone | chr3:20863460-20...    60   1e-09
AT5G27690.1 | Symbols:  | Heavy metal transport/detoxification s...    57   7e-09
AT5G19090.3 | Symbols:  | Heavy metal transport/detoxification s...    49   2e-06
AT5G19090.2 | Symbols:  | Heavy metal transport/detoxification s...    49   2e-06
AT3G05220.1 | Symbols:  | Heavy metal transport/detoxification s...    49   3e-06
AT5G19090.1 | Symbols:  | Heavy metal transport/detoxification s...    49   3e-06
AT1G56210.1 | Symbols:  | Heavy metal transport/detoxification s...    49   3e-06
AT3G06130.1 | Symbols:  | Heavy metal transport/detoxification s...    48   7e-06
AT3G06130.2 | Symbols:  | Heavy metal transport/detoxification s...    47   8e-06

>AT2G37390.1 | Symbols: NAKR2 | Chloroplast-targeted copper
           chaperone protein | chr2:15694300-15695461 FORWARD
           LENGTH=259
          Length = 259

 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 5/122 (4%)

Query: 91  ITTDSSSRRHLLGDVP--LIDWVSESKKITTMASSPHGAKAKPMVLTRNDSSSAHSKDQV 148
           I T   S R+LLG  P  +   V +    T  A +P G   +   LT   ++   +  QV
Sbjct: 126 IKTPVGSTRYLLGSDPDSITGSVDQDPAKTVEAEAPAG---EDKTLTEKKTTCGDTDQQV 182

Query: 149 VVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLDXXXXXXXXXXXQ 208
           VVL+VSLHC+ C GKVRKH+++M+GVTSFNID   KKVT+ GD++PL+           Q
Sbjct: 183 VVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKNAQ 242

Query: 209 LW 210
            W
Sbjct: 243 FW 244


>AT3G53530.1 | Symbols: NAKR3 | Chloroplast-targeted copper
           chaperone protein | chr3:19845199-19846583 FORWARD
           LENGTH=247
          Length = 247

 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 109/244 (44%), Gaps = 45/244 (18%)

Query: 1   MKRMDLFCSSPASTAVTSSFVLHRSRSTKTYDH------DRRKTQLHVPCSSQLPINPKP 54
           MK    +C+S ASTA  +     R+ + +  D       D R++    PCSS        
Sbjct: 1   MKAGMFYCASQASTATANG---ERTVTARAIDRHNPIIKDGRRS-FTAPCSSG-----DD 51

Query: 55  YFEKHRK--------STSSDNKQHNSETRRKSSVEVNDLYTQYPIT-------------- 92
           Y   +R+        S+S D K    +  R+S+         Y ++              
Sbjct: 52  YVAPYRQLSKITRVPSSSGDGKSVQVDKGRRSNSGSLMKLISYDVSLARKSFGCVVATPK 111

Query: 93  TDSSSRRHLLGDVPLIDWVSESKKITTM----ASSPHGAKAKPMVLTRNDSSSAHSKDQV 148
           T   S R+LLG  P+    S  +         AS+P    + P  +     SS    DQV
Sbjct: 112 TPPGSTRYLLGSDPVSLAGSTGQDTVATEESEASAPKRGSSGP--VEEKKKSSGSGSDQV 169

Query: 149 VVLRVSLHC--KACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLDXXXXXXXXXX 206
           VVLRVSLHC  + C GKV+KH+SKM+GVTSFNID  +KKVT+ GD++PL+          
Sbjct: 170 VVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCLSKVKN 229

Query: 207 XQLW 210
            Q W
Sbjct: 230 AQFW 233


>AT2G37390.2 | Symbols: NAKR2 | Chloroplast-targeted copper
           chaperone protein | chr2:15694300-15695461 FORWARD
           LENGTH=258
          Length = 258

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 70/122 (57%), Gaps = 6/122 (4%)

Query: 91  ITTDSSSRRHLLGDVP--LIDWVSESKKITTMASSPHGAKAKPMVLTRNDSSSAHSKDQV 148
           I T   S R+LLG  P  +   V +    T  A +P G   +   LT   ++   + DQV
Sbjct: 126 IKTPVGSTRYLLGSDPDSITGSVDQDPAKTVEAEAPAG---EDKTLTEKKTTCGDT-DQV 181

Query: 149 VVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLDXXXXXXXXXXXQ 208
           VVL+VSLHC+ C GKVRKH+++M+GVTSFNID   KKVT+ GD++PL+           Q
Sbjct: 182 VVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKNAQ 241

Query: 209 LW 210
            W
Sbjct: 242 FW 243


>AT3G53530.2 | Symbols: NAKR3 | Chloroplast-targeted copper
           chaperone protein | chr3:19845199-19846583 FORWARD
           LENGTH=248
          Length = 248

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 109/245 (44%), Gaps = 46/245 (18%)

Query: 1   MKRMDLFCSSPASTAVTSSFVLHRSRSTKTYDH------DRRKTQLHVPCSSQLPINPKP 54
           MK    +C+S ASTA  +     R+ + +  D       D R++    PCSS        
Sbjct: 1   MKAGMFYCASQASTATANG---ERTVTARAIDRHNPIIKDGRRS-FTAPCSSG-----DD 51

Query: 55  YFEKHRK--------STSSDNKQHNSETRRKSSVEVNDLYTQYPIT-------------- 92
           Y   +R+        S+S D K    +  R+S+         Y ++              
Sbjct: 52  YVAPYRQLSKITRVPSSSGDGKSVQVDKGRRSNSGSLMKLISYDVSLARKSFGCVVATPK 111

Query: 93  TDSSSRRHLLGDVPLIDWVSESKKITTM----ASSPHGAKAKPMVLTRNDSSSAHSKDQV 148
           T   S R+LLG  P+    S  +         AS+P    + P  +     SS    DQV
Sbjct: 112 TPPGSTRYLLGSDPVSLAGSTGQDTVATEESEASAPKRGSSGP--VEEKKKSSGSGSDQV 169

Query: 149 VVLRVSLHC--KACVGKVRKHISKME-GVTSFNIDMVTKKVTIIGDVSPLDXXXXXXXXX 205
           VVLRVSLHC  + C GKV+KH+SKM+ GVTSFNID  +KKVT+ GD++PL+         
Sbjct: 170 VVLRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVTGDITPLEVLGCLSKVK 229

Query: 206 XXQLW 210
             Q W
Sbjct: 230 NAQFW 234


>AT5G02600.1 | Symbols: NAKR1 | Heavy metal transport/detoxification
           superfamily protein  | chr5:585713-586855 REVERSE
           LENGTH=319
          Length = 319

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 47/67 (70%)

Query: 144 SKDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLDXXXXXXX 203
           S DQVVVLRVSLHCK C GKV+KH+SK++GVTS+NID   KKVT+ GDV+PL        
Sbjct: 247 SSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISK 306

Query: 204 XXXXQLW 210
               Q W
Sbjct: 307 VKNAQFW 313


>AT5G02600.2 | Symbols: NAKR1 | Heavy metal transport/detoxification
           superfamily protein  | chr5:584486-586855 REVERSE
           LENGTH=319
          Length = 319

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 47/67 (70%)

Query: 144 SKDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLDXXXXXXX 203
           S DQVVVLRVSLHCK C GKV+KH+SK++GVTS+NID   KKVT+ GDV+PL        
Sbjct: 247 SSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISK 306

Query: 204 XXXXQLW 210
               Q W
Sbjct: 307 VKNAQFW 313


>AT2G28660.1 | Symbols:  | Chloroplast-targeted copper chaperone
           protein | chr2:12295419-12296944 FORWARD LENGTH=265
          Length = 265

 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 48/65 (73%)

Query: 146 DQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLDXXXXXXXXX 205
           DQVVVLRVS+HCK C GKVRKHISKMEGVTS+ ID+ TKKVT++G ++P+          
Sbjct: 182 DQVVVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATKKVTVVGKITPVGLVESISKVK 241

Query: 206 XXQLW 210
             QLW
Sbjct: 242 FAQLW 246


>AT3G24450.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:8880286-8881611 REVERSE
           LENGTH=140
          Length = 140

 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 44/70 (62%)

Query: 141 SAHSKDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSPLDXXXX 200
           + H K ++V L+VS+HC  C  KV KHISK++GVT + +++ +KKV + G++ P+D    
Sbjct: 68  AFHLKPKIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNILPVDVLES 127

Query: 201 XXXXXXXQLW 210
                  QLW
Sbjct: 128 ICKVKNAQLW 137


>AT1G66240.1 | Symbols: ATX1, ATATX1 | homolog of anti-oxidant 1 |
           chr1:24686445-24687327 REVERSE LENGTH=106
          Length = 106

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 37/48 (77%)

Query: 147 QVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           Q VVLRV++ C+ CVG V++ + KMEGV SF++D+  +KVT+ G+V P
Sbjct: 33  QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQP 80


>AT3G56240.1 | Symbols: CCH | copper chaperone |
           chr3:20863460-20864402 REVERSE LENGTH=121
          Length = 121

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 147 QVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           Q VVL+V + C+ CVG V + + KMEGV SF+ID+  +KVT+ G+V P
Sbjct: 3   QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEP 50


>AT5G27690.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:9803796-9805036 FORWARD
           LENGTH=352
          Length = 352

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 36/45 (80%)

Query: 150 VLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           VLRVS+HC+ C  K++K +SK++GV + NID+  +KVT+IG+V P
Sbjct: 33  VLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEP 77


>AT5G19090.3 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:6387910-6389855 FORWARD
           LENGTH=465
          Length = 465

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%)

Query: 145 KDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           K Q  VL+V++HC  C  KV+K + K+EGV +  ID    KVT+ G+V P
Sbjct: 8   KIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDP 57


>AT5G19090.2 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:6387910-6389855 FORWARD
           LENGTH=465
          Length = 465

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%)

Query: 145 KDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           K Q  VL+V++HC  C  KV+K + K+EGV +  ID    KVT+ G+V P
Sbjct: 8   KIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDP 57


>AT3G05220.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:1488808-1491171 FORWARD
           LENGTH=577
          Length = 577

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 145 KDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           K Q  VL+V++HC+ C  KV+K + K+EGV S   D+   +VT+ G++ P
Sbjct: 8   KLQTCVLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDP 57


>AT5G19090.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr5:6387910-6389855 FORWARD
           LENGTH=587
          Length = 587

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%)

Query: 145 KDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           K Q  VL+V++HC  C  KV+K + K+EGV +  ID    KVT+ G+V P
Sbjct: 8   KIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDP 57


>AT1G56210.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr1:21035715-21037019 FORWARD
           LENGTH=364
          Length = 364

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%)

Query: 151 LRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           L+VS+HC+ C  KV+K ++ +EGV   +ID+   KVT+IG +SP
Sbjct: 44  LKVSIHCEGCKRKVKKILTSIEGVFKVDIDVKQHKVTVIGIISP 87


>AT3G06130.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:1853048-1854673 REVERSE
           LENGTH=473
          Length = 473

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 31/50 (62%)

Query: 145 KDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           K Q  VL+V++HC  C  KV+K + K+EGV +  ID    KVT+ G V P
Sbjct: 8   KIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDP 57


>AT3G06130.2 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr3:1853193-1854673 REVERSE
           LENGTH=349
          Length = 349

 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 31/50 (62%)

Query: 145 KDQVVVLRVSLHCKACVGKVRKHISKMEGVTSFNIDMVTKKVTIIGDVSP 194
           K Q  VL+V++HC  C  KV+K + K+EGV +  ID    KVT+ G V P
Sbjct: 8   KIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDP 57