Miyakogusa Predicted Gene

Lj0g3v0065729.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0065729.1 Non Chatacterized Hit- tr|I3SJJ0|I3SJJ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,95.12,0,Ribosomal_L29,Ribosomal protein L29; SUBFAMILY NOT
NAMED,NULL; 60S RIBOSOMAL PROTEIN L35,NULL; seg,N,CUFF.3057.1
         (123 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G02610.1 | Symbols:  | Ribosomal L29 family protein  | chr5:5...   184   2e-47
AT2G39390.1 | Symbols:  | Ribosomal L29 family protein  | chr2:1...   183   2e-47
AT3G55170.2 | Symbols:  | Ribosomal L29 family protein  | chr3:2...   181   7e-47
AT3G55170.1 | Symbols:  | Ribosomal L29 family protein  | chr3:2...   181   7e-47
AT3G09500.1 | Symbols:  | Ribosomal L29 family protein  | chr3:2...   181   1e-46
AT5G02610.2 | Symbols:  | Ribosomal L29 family protein  | chr5:5...   170   2e-43

>AT5G02610.1 | Symbols:  | Ribosomal L29 family protein  |
           chr5:587611-588547 FORWARD LENGTH=123
          Length = 123

 Score =  184 bits (466), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/123 (78%), Positives = 103/123 (83%)

Query: 1   MARIKVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR+KS                  RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
           ISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKKKE+YFP+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYA 120

Query: 121 VKV 123
           +KV
Sbjct: 121 IKV 123


>AT2G39390.1 | Symbols:  | Ribosomal L29 family protein  |
           chr2:16450803-16451762 REVERSE LENGTH=123
          Length = 123

 Score =  183 bits (465), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/123 (78%), Positives = 102/123 (82%)

Query: 1   MARIKVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR KS                  RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
           ISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKKKE+YFP+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 VKV 123
           +KV
Sbjct: 121 IKV 123


>AT3G55170.2 | Symbols:  | Ribosomal L29 family protein  |
           chr3:20453136-20454293 REVERSE LENGTH=123
          Length = 123

 Score =  181 bits (460), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 95/123 (77%), Positives = 102/123 (82%)

Query: 1   MARIKVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR+KS                  RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
            SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKKK++YFP+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120

Query: 121 VKV 123
           +KV
Sbjct: 121 IKV 123


>AT3G55170.1 | Symbols:  | Ribosomal L29 family protein  |
           chr3:20453136-20454293 REVERSE LENGTH=123
          Length = 123

 Score =  181 bits (460), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 95/123 (77%), Positives = 102/123 (82%)

Query: 1   MARIKVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR+KS                  RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
            SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKKK++YFP+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120

Query: 121 VKV 123
           +KV
Sbjct: 121 IKV 123


>AT3G09500.1 | Symbols:  | Ribosomal L29 family protein  |
           chr3:2917047-2917895 FORWARD LENGTH=123
          Length = 123

 Score =  181 bits (458), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 96/123 (78%), Positives = 101/123 (82%)

Query: 1   MARIKVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKV+ELR KS                  RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120
            SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKKKE+YFP+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 VKV 123
           +KV
Sbjct: 121 IKV 123


>AT5G02610.2 | Symbols:  | Ribosomal L29 family protein  |
           chr5:587611-588547 FORWARD LENGTH=146
          Length = 146

 Score =  170 bits (431), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/146 (66%), Positives = 103/146 (70%), Gaps = 23/146 (15%)

Query: 1   MARIKVYELRNKSXXXXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKI------------- 47
           MARIKV+ELR+KS                  RVAKVTGGAPNKLSKI             
Sbjct: 1   MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIRMDVDLAYDSNMY 60

Query: 48  ----------KVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTK 97
                     KVVR SIAQVLTVISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTK
Sbjct: 61  LRSIKFGPCIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTK 120

Query: 98  HQASLKTEREKKKELYFPLRKYAVKV 123
           HQASLKTEREKKKE+YFP+RKYA+KV
Sbjct: 121 HQASLKTEREKKKEMYFPVRKYAIKV 146