Miyakogusa Predicted Gene

Lj0g3v0062359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0062359.1 tr|I1NE68|I1NE68_SOYBN Superoxide dismutase
OS=Glycine max GN=Gma.53316 PE=3 SV=1,86.64,0,SUPEROXIDE DISMUTASE
[FE],NULL; SUPEROXIDE DISMUTASE 2,Manganese/iron superoxide dismutase;
SOD_MN,M,CUFF.2804.1
         (262 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23310.1 | Symbols: FSD3 | Fe superoxide dismutase 3 | chr5:7...   378   e-105
AT5G51100.1 | Symbols: FSD2 | Fe superoxide dismutase 2 | chr5:2...   239   2e-63
AT4G25100.5 | Symbols: FSD1 | Fe superoxide dismutase 1 | chr4:1...   212   3e-55
AT4G25100.2 | Symbols: FSD1 | Fe superoxide dismutase 1 | chr4:1...   212   3e-55
AT4G25100.3 | Symbols: FSD1 | Fe superoxide dismutase 1 | chr4:1...   212   3e-55
AT4G25100.1 | Symbols: FSD1, ATFSD1 | Fe superoxide dismutase 1 ...   212   3e-55
AT4G25100.4 | Symbols: FSD1 | Fe superoxide dismutase 1 | chr4:1...   181   4e-46
AT3G10920.1 | Symbols: MSD1, MEE33, ATMSD1 | manganese superoxid...   109   2e-24
AT3G56350.1 | Symbols:  | Iron/manganese superoxide dismutase fa...   105   4e-23
AT3G10920.2 | Symbols: MSD1 | manganese superoxide dismutase 1 |...   103   1e-22

>AT5G23310.1 | Symbols: FSD3 | Fe superoxide dismutase 3 |
           chr5:7850624-7852241 FORWARD LENGTH=263
          Length = 263

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/266 (68%), Positives = 216/266 (81%), Gaps = 7/266 (2%)

Query: 1   MACCYFNPIPTSSHPILSDLSRKFKIPKLLHRNRRFNGSPRSS----KVTAFYGLKTPPY 56
           M+ C    + TS    +SD S + K PKLL+ + +       S    KV A+YGLKTPPY
Sbjct: 1   MSSCV---VTTSCFYTISDSSIRLKSPKLLNLSNQQRRRSLRSRGGLKVEAYYGLKTPPY 57

Query: 57  ELDALEPYMSKKTIDMHWGEHHRNFVEGLNRQLEKDDILYGHTLDELVKVTYNNGNPLPE 116
            LDALEPYMS++T+++HWG+HHR +V+ LN+QL KDD LYG+T++EL+K TYNNGNPLPE
Sbjct: 58  PLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEELIKATYNNGNPLPE 117

Query: 117 FNNAAEVWNHDFFWESMQPGGGDMPILGLLEQIEKDFGSFTNFKEKFIEAALTLFGSGWV 176
           FNNAA+V+NHDFFWESMQPGGGD P  G+LEQI+KDFGSFTNF+EKF  AALT FGSGWV
Sbjct: 118 FNNAAQVYNHDFFWESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKFTNAALTQFGSGWV 177

Query: 177 WLVLKREERRLAIVKTSNAICPTVWDDIPIINLDLWEHAYYLDYKNDRAKYVNVFMDHLV 236
           WLVLKREERRL +VKTSNAI P VWDDIPII +D+WEH+YYLDYKNDRAKY+N F++HLV
Sbjct: 178 WLVLKREERRLEVVKTSNAINPLVWDDIPIICVDVWEHSYYLDYKNDRAKYINTFLNHLV 237

Query: 237 SWNAATERLAWGEAFVNLGEPKIPVA 262
           SWNAA  R+A  EAFVNLGEP IP+A
Sbjct: 238 SWNAAMSRMARAEAFVNLGEPNIPIA 263


>AT5G51100.1 | Symbols: FSD2 | Fe superoxide dismutase 2 |
           chr5:20773357-20775635 REVERSE LENGTH=305
          Length = 305

 Score =  239 bits (609), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 115/219 (52%), Positives = 150/219 (68%), Gaps = 16/219 (7%)

Query: 42  SSKVTAFYGLKTPPYELDALEPYMSKKTIDMHWGEHHRNFVEGLNRQLEKDDILYGHTLD 101
           S  +TA + LK PPY LDALEP+MS++T+D HWG+HH+ +VE LN+Q+   D L   +L+
Sbjct: 46  SGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTD-LDALSLE 104

Query: 102 ELVKVTYNNGNPLPEFNNAAEVWNHDFFWESMQPGGGDMPILGLLEQIEKDFGSFTNFKE 161
           E+V ++YN GN LP FNNAA+ WNH+FFWES+QPGGG  P   LL  IE+DFGSF  F E
Sbjct: 105 EVVLLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLE 164

Query: 162 KFIEAALTLFGSGWVWLVL---------------KREERRLAIVKTSNAICPTVWDDIPI 206
           +F  AA + FGSGW WL                 K E+++L IVKT NA+ P VWD  P+
Sbjct: 165 RFKSAAASNFGSGWTWLAYKANRLDVANAVNPLPKEEDKKLVIVKTPNAVNPLVWDYSPL 224

Query: 207 INLDLWEHAYYLDYKNDRAKYVNVFMDHLVSWNAATERL 245
           + +D WEHAYYLD++N RA+Y+N FM+ LVSW   + RL
Sbjct: 225 LTIDTWEHAYYLDFENRRAEYINTFMEKLVSWETVSTRL 263


>AT4G25100.5 | Symbols: FSD1 | Fe superoxide dismutase 1 |
           chr4:12884649-12886501 REVERSE LENGTH=212
          Length = 212

 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 108/209 (51%), Positives = 144/209 (68%), Gaps = 3/209 (1%)

Query: 42  SSKVTAFYGLKTPPYELDALEPYMSKKTIDMHWGEHHRNFVEGLNRQLEKDDILYGHTLD 101
           SS VTA Y LK PP+ LDALEP+MSK+T++ HWG+HHR +V+ L +Q+   + L G  L+
Sbjct: 4   SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLE 62

Query: 102 ELVKVTYNNGNPLPEFNNAAEVWNHDFFWESMQPGGGDMPILGLLEQIEKDFGSFTNFKE 161
            ++  TYNNG+ LP FNNAA+ WNH+FFWESM+PGGG  P   LL  +E+DF S+  F E
Sbjct: 63  HIIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYE 122

Query: 162 KFIEAALTLFGSGWVWLVLKREERRLAIVKTSNAICPTVWDDIPIINLDLWEHAYYLDYK 221
           +F  AA T FG+GW WL    E  +L +VKT NA+ P V    P++ +D+WEHAYYLD++
Sbjct: 123 EFNAAAATQFGAGWAWLAYSNE--KLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQ 180

Query: 222 NDRAKYVNVFMDHLVSWNAATERLAWGEA 250
           N R  Y+  FM +LVSW A + RL   +A
Sbjct: 181 NRRPDYIKTFMTNLVSWEAVSARLEAAKA 209


>AT4G25100.2 | Symbols: FSD1 | Fe superoxide dismutase 1 |
           chr4:12884649-12886501 REVERSE LENGTH=212
          Length = 212

 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 108/209 (51%), Positives = 144/209 (68%), Gaps = 3/209 (1%)

Query: 42  SSKVTAFYGLKTPPYELDALEPYMSKKTIDMHWGEHHRNFVEGLNRQLEKDDILYGHTLD 101
           SS VTA Y LK PP+ LDALEP+MSK+T++ HWG+HHR +V+ L +Q+   + L G  L+
Sbjct: 4   SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLE 62

Query: 102 ELVKVTYNNGNPLPEFNNAAEVWNHDFFWESMQPGGGDMPILGLLEQIEKDFGSFTNFKE 161
            ++  TYNNG+ LP FNNAA+ WNH+FFWESM+PGGG  P   LL  +E+DF S+  F E
Sbjct: 63  HIIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYE 122

Query: 162 KFIEAALTLFGSGWVWLVLKREERRLAIVKTSNAICPTVWDDIPIINLDLWEHAYYLDYK 221
           +F  AA T FG+GW WL    E  +L +VKT NA+ P V    P++ +D+WEHAYYLD++
Sbjct: 123 EFNAAAATQFGAGWAWLAYSNE--KLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQ 180

Query: 222 NDRAKYVNVFMDHLVSWNAATERLAWGEA 250
           N R  Y+  FM +LVSW A + RL   +A
Sbjct: 181 NRRPDYIKTFMTNLVSWEAVSARLEAAKA 209


>AT4G25100.3 | Symbols: FSD1 | Fe superoxide dismutase 1 |
           chr4:12884649-12886501 REVERSE LENGTH=212
          Length = 212

 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 108/209 (51%), Positives = 144/209 (68%), Gaps = 3/209 (1%)

Query: 42  SSKVTAFYGLKTPPYELDALEPYMSKKTIDMHWGEHHRNFVEGLNRQLEKDDILYGHTLD 101
           SS VTA Y LK PP+ LDALEP+MSK+T++ HWG+HHR +V+ L +Q+   + L G  L+
Sbjct: 4   SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLE 62

Query: 102 ELVKVTYNNGNPLPEFNNAAEVWNHDFFWESMQPGGGDMPILGLLEQIEKDFGSFTNFKE 161
            ++  TYNNG+ LP FNNAA+ WNH+FFWESM+PGGG  P   LL  +E+DF S+  F E
Sbjct: 63  HIIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYE 122

Query: 162 KFIEAALTLFGSGWVWLVLKREERRLAIVKTSNAICPTVWDDIPIINLDLWEHAYYLDYK 221
           +F  AA T FG+GW WL    E  +L +VKT NA+ P V    P++ +D+WEHAYYLD++
Sbjct: 123 EFNAAAATQFGAGWAWLAYSNE--KLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQ 180

Query: 222 NDRAKYVNVFMDHLVSWNAATERLAWGEA 250
           N R  Y+  FM +LVSW A + RL   +A
Sbjct: 181 NRRPDYIKTFMTNLVSWEAVSARLEAAKA 209


>AT4G25100.1 | Symbols: FSD1, ATFSD1 | Fe superoxide dismutase 1 |
           chr4:12884649-12886501 REVERSE LENGTH=212
          Length = 212

 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 108/209 (51%), Positives = 144/209 (68%), Gaps = 3/209 (1%)

Query: 42  SSKVTAFYGLKTPPYELDALEPYMSKKTIDMHWGEHHRNFVEGLNRQLEKDDILYGHTLD 101
           SS VTA Y LK PP+ LDALEP+MSK+T++ HWG+HHR +V+ L +Q+   + L G  L+
Sbjct: 4   SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLE 62

Query: 102 ELVKVTYNNGNPLPEFNNAAEVWNHDFFWESMQPGGGDMPILGLLEQIEKDFGSFTNFKE 161
            ++  TYNNG+ LP FNNAA+ WNH+FFWESM+PGGG  P   LL  +E+DF S+  F E
Sbjct: 63  HIIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYE 122

Query: 162 KFIEAALTLFGSGWVWLVLKREERRLAIVKTSNAICPTVWDDIPIINLDLWEHAYYLDYK 221
           +F  AA T FG+GW WL    E  +L +VKT NA+ P V    P++ +D+WEHAYYLD++
Sbjct: 123 EFNAAAATQFGAGWAWLAYSNE--KLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQ 180

Query: 222 NDRAKYVNVFMDHLVSWNAATERLAWGEA 250
           N R  Y+  FM +LVSW A + RL   +A
Sbjct: 181 NRRPDYIKTFMTNLVSWEAVSARLEAAKA 209


>AT4G25100.4 | Symbols: FSD1 | Fe superoxide dismutase 1 |
           chr4:12884649-12885660 REVERSE LENGTH=186
          Length = 186

 Score =  181 bits (459), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 92/186 (49%), Positives = 126/186 (67%), Gaps = 3/186 (1%)

Query: 65  MSKKTIDMHWGEHHRNFVEGLNRQLEKDDILYGHTLDELVKVTYNNGNPLPEFNNAAEVW 124
           MSK+T++ HWG+HHR +V+ L +Q+   + L G  L+ ++  TYNNG+ LP FNNAA+ W
Sbjct: 1   MSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLEHIIHSTYNNGDLLPAFNNAAQAW 59

Query: 125 NHDFFWESMQPGGGDMPILGLLEQIEKDFGSFTNFKEKFIEAALTLFGSGWVWLVLKREE 184
           NH+FFWESM+PGGG  P   LL  +E+DF S+  F E+F  AA T FG+GW WL    E 
Sbjct: 60  NHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFNAAAATQFGAGWAWLAYSNE- 118

Query: 185 RRLAIVKTSNAICPTVWDDIPIINLDLWEHAYYLDYKNDRAKYVNVFMDHLVSWNAATER 244
            +L +VKT NA+ P V    P++ +D+WEHAYYLD++N R  Y+  FM +LVSW A + R
Sbjct: 119 -KLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSAR 177

Query: 245 LAWGEA 250
           L   +A
Sbjct: 178 LEAAKA 183


>AT3G10920.1 | Symbols: MSD1, MEE33, ATMSD1 | manganese superoxide
           dismutase 1 | chr3:3418015-3419581 FORWARD LENGTH=231
          Length = 231

 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 20/214 (9%)

Query: 42  SSKVTAFYGLKT-----PPYELDALEPYMSKKTIDMHWGEHHRNFVEGLNRQLEK-DDIL 95
           SS++    G++T      PY+  ALEP +S + + +H  +HH+ +V   N  LE+ D  +
Sbjct: 19  SSRLLRIRGIQTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAV 78

Query: 96  YGHTLDELVKVTYNNGNPLPEFNNAAEVWNHDFFWESMQP---GGGDMPILGLLEQIEKD 152
                  +VK+         +FN    V NH  FW+++ P   GGG+ P   L   I+  
Sbjct: 79  NKGDASTVVKL-----QSAIKFNGGGHV-NHSIFWKNLAPSSEGGGEPPKGSLGSAIDAH 132

Query: 153 FGSFTNFKEKFIEAALTLFGSGWVWLVLKREERRLAIVKTSNA--ICPTVWDDIPIINLD 210
           FGS     +K       + GSGWVWL L +E ++L +  T+N   +       +P++ +D
Sbjct: 133 FGSLEGLVKKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGSLVPLVGID 192

Query: 211 LWEHAYYLDYKNDRAKYV-NVFMDHLVSWNAATE 243
           +WEHAYYL YKN R +Y+ NV+   +++W  A+E
Sbjct: 193 VWEHAYYLQYKNVRPEYLKNVW--KVINWKYASE 224


>AT3G56350.1 | Symbols:  | Iron/manganese superoxide dismutase
           family protein | chr3:20894155-20895625 REVERSE
           LENGTH=241
          Length = 241

 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 17/197 (8%)

Query: 55  PYELDALEPYMSKKTIDMHWGEHHRNFVEGLNRQLEK-DDILYGHTLDELVKVTYNNGNP 113
           PY  DALEP +S++ + +H  +HH+ +V   N+ L      +       +VK+       
Sbjct: 42  PYAYDALEPAISEEIMRLHHQKHHQTYVTQYNKALNSLRSAMADGDHSSVVKL-----QS 96

Query: 114 LPEFNNAAEVWNHDFFWESMQP---GGGDMPILGLLEQIEKDFGSFTNFKEKFIEAALTL 170
           L +FN    V NH  FW+++ P   GGG  P   L   I+  FGS     +K       +
Sbjct: 97  LIKFNGGGHV-NHAIFWKNLAPVHEGGGKPPHDPLASAIDAHFGSLEGLIQKMNAEGAAV 155

Query: 171 FGSGWVWLVLKREERRLAIVKTSNAICPTVWDD---IPIINLDLWEHAYYLDYKNDRAKY 227
            GSGWVW  L RE +RL +  T+N   P V      +P+I +D+WEHAYY  YKN RA+Y
Sbjct: 156 QGSGWVWFGLDRELKRLVVETTANQ-DPLVTKGSHLVPLIGIDVWEHAYYPQYKNARAEY 214

Query: 228 V-NVFMDHLVSWNAATE 243
           + N++   +++W  A +
Sbjct: 215 LKNIWT--VINWKYAAD 229


>AT3G10920.2 | Symbols: MSD1 | manganese superoxide dismutase 1 |
           chr3:3418015-3419581 FORWARD LENGTH=230
          Length = 230

 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 21/214 (9%)

Query: 42  SSKVTAFYGLKT-----PPYELDALEPYMSKKTIDMHWGEHHRNFVEGLNRQLEK-DDIL 95
           SS++    G++T      PY+  ALEP +S + + +H  +HH+ +V   N  LE+ D  +
Sbjct: 19  SSRLLRIRGIQTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAV 78

Query: 96  YGHTLDELVKVTYNNGNPLPEFNNAAEVWNHDFFWESMQP---GGGDMPILGLLEQIEKD 152
                  +VK+         +FN    V NH  FW+++ P   GGG+ P   L   I+  
Sbjct: 79  NKGDASTVVKL-----QSAIKFNGGGHV-NHSIFWKNLAPSSEGGGEPPKGSLGSAIDAH 132

Query: 153 FGSFTNFKEKFIEAALTLFGSGWVWLVLKREERRLAIVKTSNA--ICPTVWDDIPIINLD 210
           FGS     +K       + GSGW WL L +E ++L +  T+N   +       +P++ +D
Sbjct: 133 FGSLEGLVKKMSAEGAAVQGSGW-WLGLDKELKKLVVDTTANQDPLVTKGGSLVPLVGID 191

Query: 211 LWEHAYYLDYKNDRAKYV-NVFMDHLVSWNAATE 243
           +WEHAYYL YKN R +Y+ NV+   +++W  A+E
Sbjct: 192 VWEHAYYLQYKNVRPEYLKNVW--KVINWKYASE 223