Miyakogusa Predicted Gene

Lj0g3v0062309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0062309.1 Non Chatacterized Hit- tr|E1ZLR1|E1ZLR1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,25.99,4e-17,FAMILY NOT NAMED,NULL; ATHOOK,AT hook-like; WD40
repeat-like,WD40-repeat-containing domain; DNA bind,CUFF.2802.1
         (1062 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19485.2 | Symbols:  | Transducin/WD40 repeat-like superfamil...   500   e-141
AT1G19485.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   500   e-141

>AT1G19485.2 | Symbols:  | Transducin/WD40 repeat-like superfamily
            protein | chr1:6747167-6751443 FORWARD LENGTH=815
          Length = 815

 Score =  500 bits (1288), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 283/626 (45%), Positives = 379/626 (60%), Gaps = 37/626 (5%)

Query: 435  TTNKRKRG-PKKHDATNDKSAPMKRPRGRSKRNSREVTISDLNCNDQFV-PLAVQFPEDS 492
            T  K+ RG P+KH     +    K+PRGR ++ S      +L+ +  +V  L+V++PE+S
Sbjct: 206  TEPKKPRGRPRKHPVETTEP---KKPRGRPRKKSTAELPVELDDDVLYVEALSVRYPENS 262

Query: 493  AEFITPDVAHGNCNEHAAQQCSDTEQKHAKKVDFASNSETFVKSRLNIDHMEGRSNEDVS 552
                TP               ++T+  +       S+    +K  +     + +S E+  
Sbjct: 263  VVPATP------LRILRETPVTETKVNNEGSGQVLSSDNANIKLPVRRKRQKTKSTEESC 316

Query: 553  QPLLIQCGNATNHQMCCSSELEPPAATCSIPDVTMPRVVSCVAHNGKVAWDVKWRPLNNS 612
             P++++   A  +          P++  S   V +PRVV C+AHNGKV WD+KWRP    
Sbjct: 317  TPMILEYSEAVGNVP------SKPSSGISEDIVALPRVVLCLAHNGKVVWDMKWRPSYAG 370

Query: 613  DSLCKHRMGYLAVLLGNGSLEVWEVPLPHVLRAIY--GQREGTDPRFIKLDPVFKCSMLK 670
            DSL KH MGYLAVLLGNGSLEVW+VP+P    A+Y   ++  TDPRF+KL PVFKCS LK
Sbjct: 371  DSLNKHSMGYLAVLLGNGSLEVWDVPMPKATSALYLSSKKAATDPRFVKLAPVFKCSNLK 430

Query: 671  RGGRQSIPLTMEWSVTPPHEYLLAGCHDGTVALWKFSTNSSSKCDDTKPVLCFGGDTVPI 730
             G  +SIPLT+EWS     ++LLAGCHDGTVALWKFST  SS  +DT+P+L F  DT PI
Sbjct: 431  CGDTKSIPLTVEWSTLGNPDFLLAGCHDGTVALWKFSTTKSS--EDTRPLLFFSADTAPI 488

Query: 731  RTVAWAPFEGDPESSNIIATAGHEGLKFWDLRNPFRPLRNLHPAPRIIYSLDWTSKPSSI 790
            R VAWAP E D ES+NI+ATAGH GLKFWDLR+PFRPL +LHP PR IYSLDW   PS +
Sbjct: 489  RAVAWAPGESDQESANIVATAGHAGLKFWDLRDPFRPLWDLHPVPRFIYSLDWLQDPSCV 548

Query: 791  IMSFDDGTMRTMSLMKAANELPVTGTTYNGKKQPWMHGSTFSTSAIWSVHVSPITGMAAY 850
            ++SFDDGT+R +SL+K A ++P TG  Y   KQ  +     ST  IWS+ VS +TG+AAY
Sbjct: 549  LLSFDDGTLRILSLVKVAYDVPATGRPYPNTKQQGLSVYNCSTFPIWSIQVSRLTGIAAY 608

Query: 851  CCADGTAIRFQLTTKAVETDNSHNRIPYFLCGSQSEEESTLIVNTPVPNTRFPLRKP-QE 909
            C ADG+   F+LTTKAVE D + NR P++LCG  + ++ST IV++PVP+    L+KP  E
Sbjct: 609  CTADGSIFHFELTTKAVEKD-TRNRTPHYLCGQLTMKDSTFIVHSPVPDIPIVLKKPVGE 667

Query: 910  RARHAHSFREFLSKENLSKSVNNQMAKANDADSQTLALCDGDNLSLESDEALSSGEQHGR 969
                    R  L+ E+ S+  +N       +D Q LA    ++  LES+   ++ +    
Sbjct: 668  TGEKQRCLRSLLN-ESPSRYASNV------SDVQPLAFAHVEDPGLESESEGTNNKAAKS 720

Query: 970  EKLSSSRKKKAVE---STAIVCTDD---VSTSRRAVDDEKSDFGGIPEVFPPKMVALHRV 1023
            +        +A E   S A+VC  +       RR      S+ G   E FPPKMVA+HRV
Sbjct: 721  KAKKGKNNARAEEDENSRALVCVKEDGGEEEGRRKAASNNSN-GMKAEGFPPKMVAMHRV 779

Query: 1024 RWNMNMGSERWLCYGGASGVLRCQQI 1049
            RWNMN GSERWLCYGGA+G++RCQ+I
Sbjct: 780  RWNMNKGSERWLCYGGAAGIVRCQEI 805



 Score =  201 bits (512), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/300 (37%), Positives = 170/300 (56%), Gaps = 58/300 (19%)

Query: 58  ISLFDYSVENFFRDMDTIARLCGNEEQHHIDLDQSEIQRMSSSVTFLRQWRDFKYPSRSI 117
           ISLFDYS E+  + +++I  LCG   + + D+D+++I  +SSSVTFLR+WR + +  +S 
Sbjct: 8   ISLFDYSAESHLKAVESITDLCG---EANADIDENDINILSSSVTFLREWRHYNFEPKSF 64

Query: 118 RFAHGLESSECCQGKDVGALSLPQFSSAIVPK---HDMQKEVESQDSRDFVMNVGGSIWA 174
            F +  E +   Q KD+ + +LPQFSSA  PK   HD +     + S+DFVM+VGGS+WA
Sbjct: 65  AFYNEAEKNH--QPKDINSQTLPQFSSARAPKVKIHDDESSSSGEISKDFVMHVGGSVWA 122

Query: 175 LDWCPRIHEDPDCSIKCEFIAVAAHPPGSSYHKIGASLAGRGVVQIWCIVNVRGQNEDTS 234
           ++WCPR+H +PD   KCEF+AVA HPP S  HKIG  L GRG++QIWCI+N   + +D+ 
Sbjct: 123 MEWCPRVHGNPDAQAKCEFLAVATHPPDSYSHKIGIPLIGRGIIQIWCIINATCK-KDSG 181

Query: 235 SVTEKRK---GRPKKD-GGTNDKSSQMKRPRGRPRKNSTVIAVDDTNCDTQDMPSLNIRG 290
            V++K K   G+ +K   G   ++++ K+PRGRPRK+                       
Sbjct: 182 QVSDKGKKLTGKSRKQPSGETTETTEPKKPRGRPRKHPV--------------------- 220

Query: 291 YNEDTSSVTEKRKGRPKKDGGTNDKSSQMKRPRGRPRKNSTVIAMDETNCDTQDMPSLNI 350
                                   ++++ K+PRGRPRK ST     E + D   + +L++
Sbjct: 221 ------------------------ETTEPKKPRGRPRKKSTAELPVELDDDVLYVEALSV 256


>AT1G19485.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
            protein | chr1:6747167-6751443 FORWARD LENGTH=815
          Length = 815

 Score =  500 bits (1288), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 283/626 (45%), Positives = 379/626 (60%), Gaps = 37/626 (5%)

Query: 435  TTNKRKRG-PKKHDATNDKSAPMKRPRGRSKRNSREVTISDLNCNDQFV-PLAVQFPEDS 492
            T  K+ RG P+KH     +    K+PRGR ++ S      +L+ +  +V  L+V++PE+S
Sbjct: 206  TEPKKPRGRPRKHPVETTEP---KKPRGRPRKKSTAELPVELDDDVLYVEALSVRYPENS 262

Query: 493  AEFITPDVAHGNCNEHAAQQCSDTEQKHAKKVDFASNSETFVKSRLNIDHMEGRSNEDVS 552
                TP               ++T+  +       S+    +K  +     + +S E+  
Sbjct: 263  VVPATP------LRILRETPVTETKVNNEGSGQVLSSDNANIKLPVRRKRQKTKSTEESC 316

Query: 553  QPLLIQCGNATNHQMCCSSELEPPAATCSIPDVTMPRVVSCVAHNGKVAWDVKWRPLNNS 612
             P++++   A  +          P++  S   V +PRVV C+AHNGKV WD+KWRP    
Sbjct: 317  TPMILEYSEAVGNVP------SKPSSGISEDIVALPRVVLCLAHNGKVVWDMKWRPSYAG 370

Query: 613  DSLCKHRMGYLAVLLGNGSLEVWEVPLPHVLRAIY--GQREGTDPRFIKLDPVFKCSMLK 670
            DSL KH MGYLAVLLGNGSLEVW+VP+P    A+Y   ++  TDPRF+KL PVFKCS LK
Sbjct: 371  DSLNKHSMGYLAVLLGNGSLEVWDVPMPKATSALYLSSKKAATDPRFVKLAPVFKCSNLK 430

Query: 671  RGGRQSIPLTMEWSVTPPHEYLLAGCHDGTVALWKFSTNSSSKCDDTKPVLCFGGDTVPI 730
             G  +SIPLT+EWS     ++LLAGCHDGTVALWKFST  SS  +DT+P+L F  DT PI
Sbjct: 431  CGDTKSIPLTVEWSTLGNPDFLLAGCHDGTVALWKFSTTKSS--EDTRPLLFFSADTAPI 488

Query: 731  RTVAWAPFEGDPESSNIIATAGHEGLKFWDLRNPFRPLRNLHPAPRIIYSLDWTSKPSSI 790
            R VAWAP E D ES+NI+ATAGH GLKFWDLR+PFRPL +LHP PR IYSLDW   PS +
Sbjct: 489  RAVAWAPGESDQESANIVATAGHAGLKFWDLRDPFRPLWDLHPVPRFIYSLDWLQDPSCV 548

Query: 791  IMSFDDGTMRTMSLMKAANELPVTGTTYNGKKQPWMHGSTFSTSAIWSVHVSPITGMAAY 850
            ++SFDDGT+R +SL+K A ++P TG  Y   KQ  +     ST  IWS+ VS +TG+AAY
Sbjct: 549  LLSFDDGTLRILSLVKVAYDVPATGRPYPNTKQQGLSVYNCSTFPIWSIQVSRLTGIAAY 608

Query: 851  CCADGTAIRFQLTTKAVETDNSHNRIPYFLCGSQSEEESTLIVNTPVPNTRFPLRKP-QE 909
            C ADG+   F+LTTKAVE D + NR P++LCG  + ++ST IV++PVP+    L+KP  E
Sbjct: 609  CTADGSIFHFELTTKAVEKD-TRNRTPHYLCGQLTMKDSTFIVHSPVPDIPIVLKKPVGE 667

Query: 910  RARHAHSFREFLSKENLSKSVNNQMAKANDADSQTLALCDGDNLSLESDEALSSGEQHGR 969
                    R  L+ E+ S+  +N       +D Q LA    ++  LES+   ++ +    
Sbjct: 668  TGEKQRCLRSLLN-ESPSRYASNV------SDVQPLAFAHVEDPGLESESEGTNNKAAKS 720

Query: 970  EKLSSSRKKKAVE---STAIVCTDD---VSTSRRAVDDEKSDFGGIPEVFPPKMVALHRV 1023
            +        +A E   S A+VC  +       RR      S+ G   E FPPKMVA+HRV
Sbjct: 721  KAKKGKNNARAEEDENSRALVCVKEDGGEEEGRRKAASNNSN-GMKAEGFPPKMVAMHRV 779

Query: 1024 RWNMNMGSERWLCYGGASGVLRCQQI 1049
            RWNMN GSERWLCYGGA+G++RCQ+I
Sbjct: 780  RWNMNKGSERWLCYGGAAGIVRCQEI 805



 Score =  201 bits (512), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/300 (37%), Positives = 170/300 (56%), Gaps = 58/300 (19%)

Query: 58  ISLFDYSVENFFRDMDTIARLCGNEEQHHIDLDQSEIQRMSSSVTFLRQWRDFKYPSRSI 117
           ISLFDYS E+  + +++I  LCG   + + D+D+++I  +SSSVTFLR+WR + +  +S 
Sbjct: 8   ISLFDYSAESHLKAVESITDLCG---EANADIDENDINILSSSVTFLREWRHYNFEPKSF 64

Query: 118 RFAHGLESSECCQGKDVGALSLPQFSSAIVPK---HDMQKEVESQDSRDFVMNVGGSIWA 174
            F +  E +   Q KD+ + +LPQFSSA  PK   HD +     + S+DFVM+VGGS+WA
Sbjct: 65  AFYNEAEKNH--QPKDINSQTLPQFSSARAPKVKIHDDESSSSGEISKDFVMHVGGSVWA 122

Query: 175 LDWCPRIHEDPDCSIKCEFIAVAAHPPGSSYHKIGASLAGRGVVQIWCIVNVRGQNEDTS 234
           ++WCPR+H +PD   KCEF+AVA HPP S  HKIG  L GRG++QIWCI+N   + +D+ 
Sbjct: 123 MEWCPRVHGNPDAQAKCEFLAVATHPPDSYSHKIGIPLIGRGIIQIWCIINATCK-KDSG 181

Query: 235 SVTEKRK---GRPKKD-GGTNDKSSQMKRPRGRPRKNSTVIAVDDTNCDTQDMPSLNIRG 290
            V++K K   G+ +K   G   ++++ K+PRGRPRK+                       
Sbjct: 182 QVSDKGKKLTGKSRKQPSGETTETTEPKKPRGRPRKHPV--------------------- 220

Query: 291 YNEDTSSVTEKRKGRPKKDGGTNDKSSQMKRPRGRPRKNSTVIAMDETNCDTQDMPSLNI 350
                                   ++++ K+PRGRPRK ST     E + D   + +L++
Sbjct: 221 ------------------------ETTEPKKPRGRPRKKSTAELPVELDDDVLYVEALSV 256