Miyakogusa Predicted Gene
- Lj0g3v0060759.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0060759.1 tr|A2Q465|A2Q465_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_040s0046 PE,92.46,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; HELICASE_ATP_BIND_1,Helicase,
superfamily 1/2, ATP-,CUFF.2797.1
(503 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 781 0.0
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 651 0.0
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 580 e-165
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 430 e-120
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 430 e-120
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 430 e-120
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 430 e-120
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 423 e-118
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 418 e-117
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 387 e-107
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 374 e-103
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 373 e-103
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 369 e-102
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 342 3e-94
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 333 2e-91
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 307 1e-83
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 306 3e-83
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 302 3e-82
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 302 3e-82
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 302 3e-82
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 291 8e-79
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 286 2e-77
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 282 4e-76
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 229 4e-60
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 228 7e-60
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 223 2e-58
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 223 2e-58
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 223 2e-58
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 223 3e-58
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 222 5e-58
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 221 8e-58
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 221 8e-58
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 214 1e-55
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 211 9e-55
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 205 7e-53
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 197 2e-50
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 196 4e-50
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 195 5e-50
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 195 6e-50
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 194 9e-50
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 194 1e-49
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 192 5e-49
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 191 9e-49
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 188 7e-48
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 188 7e-48
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 187 1e-47
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 186 2e-47
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 186 4e-47
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 1e-46
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 1e-46
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 1e-46
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 2e-46
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 181 1e-45
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 181 1e-45
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 177 2e-44
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 173 2e-43
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 173 2e-43
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 168 9e-42
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 165 7e-41
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 165 8e-41
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 164 1e-40
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 161 9e-40
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 161 9e-40
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 153 2e-37
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 153 3e-37
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 153 3e-37
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 152 4e-37
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 150 2e-36
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 149 5e-36
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 144 1e-34
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 142 8e-34
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 137 2e-32
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 136 3e-32
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 133 4e-31
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 127 2e-29
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 121 1e-27
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 95 9e-20
AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 74 2e-13
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 71 2e-12
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 69 5e-12
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 66 5e-11
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 64 3e-10
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 60 5e-09
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 59 7e-09
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 59 8e-09
AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 | chr3:1698180-... 50 3e-06
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/465 (81%), Positives = 417/465 (89%), Gaps = 6/465 (1%)
Query: 41 DDGGSGSPRKINLDGLSHFEKNFYTESPSVRAMTEAEVDEYRLRREITVEGRDVPKPVKT 100
D+ G+ SPRK++LDGL+ FEKNFY ESP+V AMT+ EV+EYR REITVEG+D+PKPVK+
Sbjct: 41 DNDGNESPRKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKS 100
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F DVGFP+YVLEEVKKAGF EPTPIQSQGWPMA+KGRDLIGIAETGSGKTL+YLLPAIVH
Sbjct: 101 FRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVH 160
Query: 161 VNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQ 220
VNAQP+L GDGPIVLVLAPTRELAVQIQQE +KFG+SS+IK+TCIYGGVPKGPQVRDLQ
Sbjct: 161 VNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQ 220
Query: 221 KGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQT 280
KGVEIVIATPGRLIDM+ES++TNLRRVTYLVLDEADRMLDMGFDPQIRKIVS IRPDRQT
Sbjct: 221 KGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQT 280
Query: 281 LYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLED 340
LYWSATWPKEVEQL++KFLY+PYKVIIGS DLKAN AI+Q VD++ E QKY+KLVKLLED
Sbjct: 281 LYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLED 340
Query: 341 IMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTA 400
IMDGSRIL+F+DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF+SGKSPIMTA
Sbjct: 341 IMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTA 400
Query: 401 TDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELI 460
TDVAARGLDVKDVKYVINYDFPGSLEDYVH FFT ANARFAKEL
Sbjct: 401 TDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELT 460
Query: 461 TILEEAGQRVSPDLAAMGRG-APPPPS-GGFRDRGKGYGSGRPWS 503
IL+EAGQ+VSP+LA+MGR APPPP GGFRDR GS R WS
Sbjct: 461 NILQEAGQKVSPELASMGRSTAPPPPGLGGFRDR----GSRRGWS 501
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/430 (71%), Positives = 360/430 (83%)
Query: 50 KINLDGLSHFEKNFYTESPSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEY 109
K N L HFEKNFY ESP+V+AMTE +V YR R+I+VEGRDVPKP+K F D FP+
Sbjct: 116 KQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDN 175
Query: 110 VLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDP 169
+LE + K GF EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L
Sbjct: 176 ILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQ 235
Query: 170 GDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIAT 229
DGPIVL+LAPTRELAVQIQ+E KFG S ++STCIYGG PKGPQ+RDL++GVEIVIAT
Sbjct: 236 DDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIAT 295
Query: 230 PGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPK 289
PGRLIDMLE HTNL+RVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTL WSATWP+
Sbjct: 296 PGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPR 355
Query: 290 EVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILI 349
EVE LAR+FL DPYK IIGS DLKAN +I Q ++IVP +KY++L+ LL+ +MDGS+ILI
Sbjct: 356 EVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI 415
Query: 350 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLD 409
F++TK+GCDQ+TRQLRMDGWPAL+IHGDK+Q+ERD VL+EFKSG+SPIMTATDVAARGLD
Sbjct: 416 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLD 475
Query: 410 VKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQR 469
VKD+K V+NYDFP +LEDY+H FFT NA+FA+EL+ IL+EAGQ
Sbjct: 476 VKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQV 535
Query: 470 VSPDLAAMGR 479
V P L+A+ R
Sbjct: 536 VPPTLSALVR 545
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 580 bits (1494), Expect = e-165, Method: Compositional matrix adjust.
Identities = 272/359 (75%), Positives = 314/359 (87%)
Query: 50 KINLDGLSHFEKNFYTESPSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEY 109
K N L HFEKNFY ESP+V+AMTE +V YR R+I+VEGRDVPKP+K F D FP+
Sbjct: 116 KQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDN 175
Query: 110 VLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDP 169
+LE + K GF EPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L
Sbjct: 176 ILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQ 235
Query: 170 GDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIAT 229
DGPIVL+LAPTRELAVQIQ+E KFG S ++STCIYGG PKGPQ+RDL++GVEIVIAT
Sbjct: 236 DDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIAT 295
Query: 230 PGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPK 289
PGRLIDMLE HTNL+RVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTL WSATWP+
Sbjct: 296 PGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPR 355
Query: 290 EVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILI 349
EVE LAR+FL DPYK IIGS DLKAN +I Q ++IVP +KY++L+ LL+ +MDGS+ILI
Sbjct: 356 EVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI 415
Query: 350 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGL 408
F++TK+GCDQ+TRQLRMDGWPAL+IHGDK+Q+ERD VL+EFKSG+SPIMTATDVAARGL
Sbjct: 416 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/413 (52%), Positives = 286/413 (69%), Gaps = 5/413 (1%)
Query: 68 PSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQS 127
PS +E + Y R EITV G VP P+ +F GFP +L EV AGF PTPIQ+
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 128 QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL-DPGDGPIVLVLAPTRELAV 186
Q WP+A++GRD++ IA+TGSGKTL YL+P +H+ Q I D GP +LVL+PTRELA
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRELAT 244
Query: 187 QIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRR 246
QIQ+E KFG SSRI TC+YGG PKGPQ+RDL++G +IV+ATPGRL D+LE +LR+
Sbjct: 245 QIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQ 304
Query: 247 VTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI 306
++YLVLDEADRMLDMGF+PQIRKIV +I RQTL ++ATWPK V ++A L +P +V
Sbjct: 305 ISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVN 364
Query: 307 IGSED-LKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLR 365
IG+ D L AN +I Q++++V +K +L ++L GS+++IF TK+ CDQ+TR L
Sbjct: 365 IGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLT 424
Query: 366 MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSL 425
+ A +IHGDKSQ ERD VL++F+SG++P++ ATDVAARGLDVKD++ V+NYDFP +
Sbjct: 425 RQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGV 483
Query: 426 EDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMG 478
EDYVH FF +++ A +LI ILE A QRV P + M
Sbjct: 484 EDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/413 (52%), Positives = 286/413 (69%), Gaps = 5/413 (1%)
Query: 68 PSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQS 127
PS +E + Y R EITV G VP P+ +F GFP +L EV AGF PTPIQ+
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 128 QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL-DPGDGPIVLVLAPTRELAV 186
Q WP+A++GRD++ IA+TGSGKTL YL+P +H+ Q I D GP +LVL+PTRELA
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRELAT 244
Query: 187 QIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRR 246
QIQ+E KFG SSRI TC+YGG PKGPQ+RDL++G +IV+ATPGRL D+LE +LR+
Sbjct: 245 QIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQ 304
Query: 247 VTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI 306
++YLVLDEADRMLDMGF+PQIRKIV +I RQTL ++ATWPK V ++A L +P +V
Sbjct: 305 ISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVN 364
Query: 307 IGSED-LKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLR 365
IG+ D L AN +I Q++++V +K +L ++L GS+++IF TK+ CDQ+TR L
Sbjct: 365 IGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLT 424
Query: 366 MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSL 425
+ A +IHGDKSQ ERD VL++F+SG++P++ ATDVAARGLDVKD++ V+NYDFP +
Sbjct: 425 RQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGV 483
Query: 426 EDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMG 478
EDYVH FF +++ A +LI ILE A QRV P + M
Sbjct: 484 EDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/413 (52%), Positives = 286/413 (69%), Gaps = 5/413 (1%)
Query: 68 PSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQS 127
PS +E + Y R EITV G VP P+ +F GFP +L EV AGF PTPIQ+
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 128 QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL-DPGDGPIVLVLAPTRELAV 186
Q WP+A++GRD++ IA+TGSGKTL YL+P +H+ Q I D GP +LVL+PTRELA
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRELAT 244
Query: 187 QIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRR 246
QIQ+E KFG SSRI TC+YGG PKGPQ+RDL++G +IV+ATPGRL D+LE +LR+
Sbjct: 245 QIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQ 304
Query: 247 VTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI 306
++YLVLDEADRMLDMGF+PQIRKIV +I RQTL ++ATWPK V ++A L +P +V
Sbjct: 305 ISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVN 364
Query: 307 IGSED-LKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLR 365
IG+ D L AN +I Q++++V +K +L ++L GS+++IF TK+ CDQ+TR L
Sbjct: 365 IGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLT 424
Query: 366 MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSL 425
+ A +IHGDKSQ ERD VL++F+SG++P++ ATDVAARGLDVKD++ V+NYDFP +
Sbjct: 425 RQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGV 483
Query: 426 EDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMG 478
EDYVH FF +++ A +LI ILE A QRV P + M
Sbjct: 484 EDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/413 (52%), Positives = 286/413 (69%), Gaps = 5/413 (1%)
Query: 68 PSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQS 127
PS +E + Y R EITV G VP P+ +F GFP +L EV AGF PTPIQ+
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 128 QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL-DPGDGPIVLVLAPTRELAV 186
Q WP+A++GRD++ IA+TGSGKTL YL+P +H+ Q I D GP +LVL+PTRELA
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRELAT 244
Query: 187 QIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRR 246
QIQ+E KFG SSRI TC+YGG PKGPQ+RDL++G +IV+ATPGRL D+LE +LR+
Sbjct: 245 QIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQ 304
Query: 247 VTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI 306
++YLVLDEADRMLDMGF+PQIRKIV +I RQTL ++ATWPK V ++A L +P +V
Sbjct: 305 ISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVN 364
Query: 307 IGSED-LKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLR 365
IG+ D L AN +I Q++++V +K +L ++L GS+++IF TK+ CDQ+TR L
Sbjct: 365 IGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLT 424
Query: 366 MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSL 425
+ A +IHGDKSQ ERD VL++F+SG++P++ ATDVAARGLDVKD++ V+NYDFP +
Sbjct: 425 RQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGV 483
Query: 426 EDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMG 478
EDYVH FF +++ A +LI ILE A QRV P + M
Sbjct: 484 EDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/416 (50%), Positives = 286/416 (68%), Gaps = 13/416 (3%)
Query: 64 YTESPSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPT 123
+ SP V ++ E+ YR + E+T G ++P P TF G P +L E+ AGF PT
Sbjct: 402 FVTSPDVPHLSPVEI--YRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPT 459
Query: 124 PIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV---HVNAQPILDPGDGPIVLVLAP 180
PIQ+Q WP+AL+ RD++ IA+TGSGKTL YL+PA + H D +GP VL+LAP
Sbjct: 460 PIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRN----DSRNGPTVLILAP 515
Query: 181 TRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH 240
TRELA QIQ E +FG SSRI TC+YGG PKGPQ+++L++G +IV+ATPGRL D+LE
Sbjct: 516 TRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMK 575
Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
+ ++V+ LVLDEADRMLDMGF+PQIRKIV++I P RQTL ++ATWPKEV ++A L
Sbjct: 576 MIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLV 635
Query: 301 DPYKVIIGSED-LKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQ 359
+P +V IG D L AN AI QYV++VP+ +K +L ++L GS+++IF TK+ CD
Sbjct: 636 NPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDH 695
Query: 360 ITRQL-RMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVIN 418
+ R + R G A+ IHGDK+Q ERDWVL++F+SGKS ++ ATDVAARGLD+KD++ VIN
Sbjct: 696 LARSVGRHFG--AVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVIN 753
Query: 419 YDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDL 474
YDFP +EDYVH FFT + ++A +LI +LE A Q+V P +
Sbjct: 754 YDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQV 809
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/412 (50%), Positives = 284/412 (68%), Gaps = 5/412 (1%)
Query: 68 PSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQS 127
PS A E + Y + EITV G VP P+ +F G P +L EV AGF P+PIQ+
Sbjct: 130 PSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQA 189
Query: 128 QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL-DPGDGPIVLVLAPTRELAV 186
Q WP+A++ RD++ IA+TGSGKTL YL+P +H+ Q I D GP +LVL+PTRELA
Sbjct: 190 QSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHL--QRIHNDSRMGPTILVLSPTRELAT 247
Query: 187 QIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRR 246
QIQ E KFG SS+I C+YGG PKGPQ++++++GV+IV+ATPGRL D+LE +L +
Sbjct: 248 QIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQ 307
Query: 247 VTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI 306
V+YLVLDEADRMLDMGF+PQIRKIV+++ RQTL ++ATWPKEV ++A L +P +V
Sbjct: 308 VSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVN 367
Query: 307 IGSED-LKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLR 365
IG+ D L AN +I Q ++++ +K+ +L ++L GS+I+IF TK+ CDQ+ R L
Sbjct: 368 IGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLT 427
Query: 366 MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSL 425
+ A +IHGDKSQAERD VL++F+SG++P++ ATDVAARGLDVKD++ V+NYDFP +
Sbjct: 428 RT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGV 486
Query: 426 EDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAM 477
EDYVH FF +A+ A +LI ILE A Q+V P + M
Sbjct: 487 EDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREM 538
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/381 (50%), Positives = 266/381 (69%), Gaps = 10/381 (2%)
Query: 104 VGFPEYVL-----EEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
GF Y++ V AGF P+PIQ+Q WP+A++ RD++ IA+TGSGKTL YL+P
Sbjct: 229 AGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGF 288
Query: 159 VHVNAQPIL-DPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVR 217
+H+ Q I D GP +LVL+PTRELA QIQ E KFG SS+I C+YGG PKGPQ++
Sbjct: 289 MHL--QRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLK 346
Query: 218 DLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPD 277
++++GV+IV+ATPGRL D+LE +L +V+YLVLDEADRMLDMGF+PQIRKIV+++
Sbjct: 347 EIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTK 406
Query: 278 RQTLYWSATWPKEVEQLARKFLYDPYKVIIGSED-LKANHAIKQYVDIVPEKQKYDKLVK 336
RQTL ++ATWPKEV ++A L +P +V IG+ D L AN +I Q ++++ +K+ +L +
Sbjct: 407 RQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQ 466
Query: 337 LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSP 396
+L GS+I+IF TK+ CDQ+ R L + A +IHGDKSQAERD VL++F+SG++P
Sbjct: 467 ILRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTP 525
Query: 397 IMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFA 456
++ ATDVAARGLDVKD++ V+NYDFP +EDYVH FF +A+ A
Sbjct: 526 VLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHA 585
Query: 457 KELITILEEAGQRVSPDLAAM 477
+LI ILE A Q+V P + M
Sbjct: 586 SDLIKILEGANQKVPPQVREM 606
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/443 (42%), Positives = 278/443 (62%), Gaps = 5/443 (1%)
Query: 59 FEKNFYTESPSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAG 118
F KNFY E + MT+ EV+ YR E+ V G+DVP+P+K ++ G +L+ +KK
Sbjct: 151 FRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLN 210
Query: 119 FVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVL 178
+ +P PIQ+Q P+ + GRD IG+A+TGSGKTL ++LP + H+ QP ++ GDGPI LV+
Sbjct: 211 YEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVM 270
Query: 179 APTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE 238
APTREL QI + KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L
Sbjct: 271 APTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILC 330
Query: 239 SHH---TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLA 295
+ TNLRRVT+LV+DEADRM DMGF+PQI +I+ IRP+RQT+ +SAT+P++VE LA
Sbjct: 331 TSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLA 390
Query: 296 RKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKK 355
RK L P ++ +G + N I Q V++ PE ++ +L++LL + + +IL+F+ +++
Sbjct: 391 RKVLNKPVEIQVGGRSV-VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQE 449
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKY 415
CD + R + +P LS+HG K Q +R+ +S+FK+ ++ AT VAARGLDVK+++
Sbjct: 450 KCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELEL 509
Query: 416 VINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLA 475
V+N+D P EDYVH F + +A++A +L+ LE + Q V DL
Sbjct: 510 VVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLK 569
Query: 476 AMGRGAPPPPSGGFRD-RGKGYG 497
A+ G G G GYG
Sbjct: 570 ALADGFMVKVKQGIEQAHGTGYG 592
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/443 (42%), Positives = 278/443 (62%), Gaps = 5/443 (1%)
Query: 59 FEKNFYTESPSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAG 118
F KNFY E + MT+ EV+ YR E+ V G+DVP+P+K ++ G +L+ +KK
Sbjct: 489 FRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLN 548
Query: 119 FVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVL 178
+ +P PIQ+Q P+ + GRD IG+A+TGSGKTL ++LP + H+ QP ++ GDGPI LV+
Sbjct: 549 YEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVM 608
Query: 179 APTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE 238
APTREL QI + KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L
Sbjct: 609 APTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILC 668
Query: 239 SHH---TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLA 295
+ TNLRRVT+LV+DEADRM DMGF+PQI +I+ IRP+RQT+ +SAT+P++VE LA
Sbjct: 669 TSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLA 728
Query: 296 RKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKK 355
RK L P ++ +G + N I Q V++ PE ++ +L++LL + + +IL+F+ +++
Sbjct: 729 RKVLNKPVEIQVGGRSV-VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQE 787
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKY 415
CD + R + +P LS+HG K Q +R+ +S+FK+ ++ AT VAARGLDVK+++
Sbjct: 788 KCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELEL 847
Query: 416 VINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLA 475
V+N+D P EDYVH F + +A++A +L+ LE + Q V DL
Sbjct: 848 VVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLK 907
Query: 476 AMGRGAPPPPSGGFRD-RGKGYG 497
A+ G G G GYG
Sbjct: 908 ALADGFMVKVKQGIEQAHGTGYG 930
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/422 (45%), Positives = 264/422 (62%), Gaps = 3/422 (0%)
Query: 59 FEKNFYTESPSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAG 118
K+FY E S+ MTE E +YR R I V G DV +PVKTF D GF ++ +KK
Sbjct: 188 INKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQA 247
Query: 119 FVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVL 178
+ +PT IQ Q P+ L GRD+IGIA+TGSGKT A++LP IVH+ QP L +GPI ++
Sbjct: 248 YEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVIC 307
Query: 179 APTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE 238
APTRELA QI E KF + ++ + +YGG+ K Q ++L+ G EIV+ATPGRLIDML+
Sbjct: 308 APTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLK 367
Query: 239 SHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKF 298
+ R +YLVLDEADRM D+GF+PQ+R IV QIRPDRQTL +SAT P +VE+LAR+
Sbjct: 368 MKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREI 427
Query: 299 LYDPYKVIIGSEDLKANHAIKQYVDIVP-EKQKYDKLVKLLEDIMDGSRILIFMDTKKGC 357
L DP +V +G + AN I Q V+++P + +K L++ L ++D +L+F K
Sbjct: 428 LSDPIRVTVGEVGM-ANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATV 486
Query: 358 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVI 417
D+I QL ++ + ++HGDK QA R L +FKSG ++ ATDVAARGLD+K +K V+
Sbjct: 487 DEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVV 546
Query: 418 NYDFPGSLEDYVHXX-XXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAA 476
NYD ++ +VH T ARFA EL+ L AGQ V P+L
Sbjct: 547 NYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTD 606
Query: 477 MG 478
+
Sbjct: 607 LA 608
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/406 (46%), Positives = 256/406 (63%), Gaps = 13/406 (3%)
Query: 84 RREITVEGRDVPKP----VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDL 139
++++ V G+ V + +KTF + PE VL+ K F +P+PIQS WP L GRDL
Sbjct: 97 QQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDL 154
Query: 140 IGIAETGSGKTLAYLLPAIVHVNAQPILDPGD----GPIVLVLAPTRELAVQIQQECTKF 195
IGIA+TGSGKTLA+ +PAI+HV + G P LVL+PTRELAVQI +
Sbjct: 155 IGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREA 214
Query: 196 GASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEA 255
G +KS C+YGG KGPQ+ ++ GV+IVI TPGRL D++ES+ L V+++VLDEA
Sbjct: 215 GEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEA 274
Query: 256 DRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY-DPYKVIIGSEDLKA 314
DRMLDMGF+ +R I+S RQ + +SATWP +V +LA++F+ +P KVIIGS DL A
Sbjct: 275 DRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAA 334
Query: 315 NHAIKQYVDIVPEKQKYDKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPAL 372
NH + Q ++++ E+ + +L+ LLE +R+L+F K +++ R L+ GW A+
Sbjct: 335 NHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAV 394
Query: 373 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXX 432
SIHG+K+Q+ER LS FK G P++ ATDVAARGLD+ DV+ VINY FP + EDYVH
Sbjct: 395 SIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRI 454
Query: 433 XXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMG 478
FFT N A EL+ +L EAGQ V DL G
Sbjct: 455 GRTGRAGKKGVAHTFFTPLNKGLAGELVNVLREAGQVVPADLLKFG 500
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 261/443 (58%), Gaps = 34/443 (7%)
Query: 59 FEKNFYTESPSVRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAG 118
F KNFY E + MT+ V+ YR E+ V G+DVP+P++ ++ G +L+ +KK
Sbjct: 356 FRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLN 415
Query: 119 FVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVL 178
+ +P PIQ+Q P+ + GRD IG+A+TGSGKTL ++LP + H+ QP ++ GDGPI LV+
Sbjct: 416 YEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVM 475
Query: 179 APTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE 238
APTREL QI + KF + I +YGG Q+ +L++G EIV+ TPGR+ID+L
Sbjct: 476 APTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILC 535
Query: 239 SHH---TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLA 295
+ TNLRRVTYLV+DEADRM DMGF+PQI +IV IRPDRQT+ +SAT+P++VE LA
Sbjct: 536 TSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLA 595
Query: 296 RKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKK 355
RK L P ++ +G + N I Q V+I PE +++ +L++LL + + ++L+F+ +++
Sbjct: 596 RKVLNKPVEIQVGGRSV-VNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQE 654
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKY 415
+S+FKS ++ AT VAARGLDVK+++
Sbjct: 655 KS-----------------------------ISDFKSDVCNLLIATSVAARGLDVKELEL 685
Query: 416 VINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDLA 475
V+N+D P EDYVH F + +A++A +L+ LE + Q V D+
Sbjct: 686 VVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDVK 745
Query: 476 AMGRGAPPPPSGGFRD-RGKGYG 497
A+ G G G GYG
Sbjct: 746 AVAEGFMAKVKQGIEQAHGTGYG 768
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/403 (41%), Positives = 244/403 (60%), Gaps = 24/403 (5%)
Query: 87 ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETG 146
I G +VP PV TF ++ E + +++ +V+PTP+Q P+ L+GRDL+ A+TG
Sbjct: 147 IETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTG 206
Query: 147 SGKTLAYLLPAIVHV-NAQPILDPGDG----PIVLVLAPTRELAVQIQQECTKFGASSRI 201
SGKT A+ P I + Q + P P+ ++L+PTRELA QI E KF + +
Sbjct: 207 SGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGV 266
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDM 261
K YGG P Q+R+L++GV+I++ATPGRL D+LE +++ + +L LDEADRMLDM
Sbjct: 267 KVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 326
Query: 262 GFDPQIRKIVSQI----RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIG----SEDLK 313
GF+PQIRKIV Q+ R RQTL +SAT+P+E+++LA FL + + +G S DL
Sbjct: 327 GFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDL- 385
Query: 314 ANHAIKQYVDIVPEKQKYDKLVKLL----EDIMDGSR--ILIFMDTKKGCDQITRQLRMD 367
I Q V+ V + K L+ LL E+ + G + L+F++TK+G D + L ++
Sbjct: 386 ----IVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCIN 441
Query: 368 GWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLED 427
G+PA SIHGD++Q ER+ L FKSG++PI+ ATDVAARGLD+ V +V+N+D P ++D
Sbjct: 442 GFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 501
Query: 428 YVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRV 470
YVH FF N A+ L +++EA Q V
Sbjct: 502 YVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEV 544
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/406 (42%), Positives = 243/406 (59%), Gaps = 25/406 (6%)
Query: 87 ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETG 146
I G +VP PV TF ++ E + +++ +V+PTP+Q P+ GRDL+ A+TG
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTG 193
Query: 147 SGKTLAYLLPAIVHV-NAQPILDP----GDGPIVLVLAPTRELAVQIQQECTKFGASSRI 201
SGKT A+ P I + Q I P G P+ ++L+PTRELA QI E KF + +
Sbjct: 194 SGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGV 253
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDM 261
K YGG P Q+R+L++GV+I++ATPGRL D+LE +L+ V +L LDEADRMLDM
Sbjct: 254 KVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDM 313
Query: 262 GFDPQIRKIVSQIRPD----RQTLYWSATWPKEVEQLARKFLYDPYKVIIG----SEDLK 313
GF+PQIRKIV Q+ RQT+ +SAT+P+E+++LA FL + + +G S DL
Sbjct: 314 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDL- 372
Query: 314 ANHAIKQYVDIVPEKQKYDKLVKLL----EDIMDGSR--ILIFMDTKKGCDQITRQLRMD 367
I Q V+ V + K L+ LL E+ G + L+F++TKKG D + L ++
Sbjct: 373 ----IVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCIN 428
Query: 368 GWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLED 427
G+PA +IHGD+SQ ER+ L FK+G++PI+ ATDVAARGLD+ V +V+N+D P ++D
Sbjct: 429 GFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 488
Query: 428 YVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPD 473
YVH FF N AK L +++EA Q V PD
Sbjct: 489 YVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEV-PD 533
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 236/401 (58%), Gaps = 22/401 (5%)
Query: 87 ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETG 146
+ G DVP PV TF D+ + + +++ +V PTP+Q P+ L RDL+ A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 147 SGKTLAYLLPAIVHVNAQPILDPGDG-----PIVLVLAPTRELAVQIQQECTKFGASSRI 201
SGKT A+ P I + ++ G P ++L+PTRELA QI E KF + +
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDM 261
K YGG P Q+R+L++G +I++ATPGRL D+LE +++ + +L LDEADRMLDM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 262 GFDPQIRKIVSQI----RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIG----SEDLK 313
GF+PQIRKIV Q+ R RQT+ +SAT+P ++++LA F+ + + +G S DL
Sbjct: 319 GFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDL- 377
Query: 314 ANHAIKQYVDIVPEKQKYDKLVKLL----EDIMDGSRILIFMDTKKGCDQITRQLRMDGW 369
I Q V+ V E K L+ LL E S L+F++TK+G D + L M+ +
Sbjct: 378 ----ITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEF 433
Query: 370 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 429
PA SIHGD++Q ER+ L FK+G++PI+ ATDVAARGLD+ V +V+N+D P ++DYV
Sbjct: 434 PATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 493
Query: 430 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRV 470
H FF NA+ A+ L +++EA Q V
Sbjct: 494 HRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEV 534
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 236/401 (58%), Gaps = 22/401 (5%)
Query: 87 ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETG 146
+ G DVP PV TF D+ + + +++ +V PTP+Q P+ L RDL+ A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 147 SGKTLAYLLPAIVHVNAQPILDPGDG-----PIVLVLAPTRELAVQIQQECTKFGASSRI 201
SGKT A+ P I + ++ G P ++L+PTRELA QI E KF + +
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDM 261
K YGG P Q+R+L++G +I++ATPGRL D+LE +++ + +L LDEADRMLDM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 262 GFDPQIRKIVSQI----RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIG----SEDLK 313
GF+PQIRKIV Q+ R RQT+ +SAT+P ++++LA F+ + + +G S DL
Sbjct: 319 GFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDL- 377
Query: 314 ANHAIKQYVDIVPEKQKYDKLVKLL----EDIMDGSRILIFMDTKKGCDQITRQLRMDGW 369
I Q V+ V E K L+ LL E S L+F++TK+G D + L M+ +
Sbjct: 378 ----ITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEF 433
Query: 370 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 429
PA SIHGD++Q ER+ L FK+G++PI+ ATDVAARGLD+ V +V+N+D P ++DYV
Sbjct: 434 PATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 493
Query: 430 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRV 470
H FF NA+ A+ L +++EA Q V
Sbjct: 494 HRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEV 534
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 236/401 (58%), Gaps = 22/401 (5%)
Query: 87 ITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETG 146
+ G DVP PV TF D+ + + +++ +V PTP+Q P+ L RDL+ A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 147 SGKTLAYLLPAIVHVNAQPILDPGDG-----PIVLVLAPTRELAVQIQQECTKFGASSRI 201
SGKT A+ P I + ++ G P ++L+PTRELA QI E KF + +
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDM 261
K YGG P Q+R+L++G +I++ATPGRL D+LE +++ + +L LDEADRMLDM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 262 GFDPQIRKIVSQI----RPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIG----SEDLK 313
GF+PQIRKIV Q+ R RQT+ +SAT+P ++++LA F+ + + +G S DL
Sbjct: 319 GFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDL- 377
Query: 314 ANHAIKQYVDIVPEKQKYDKLVKLL----EDIMDGSRILIFMDTKKGCDQITRQLRMDGW 369
I Q V+ V E K L+ LL E S L+F++TK+G D + L M+ +
Sbjct: 378 ----ITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEF 433
Query: 370 PALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYV 429
PA SIHGD++Q ER+ L FK+G++PI+ ATDVAARGLD+ V +V+N+D P ++DYV
Sbjct: 434 PATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 493
Query: 430 HXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRV 470
H FF NA+ A+ L +++EA Q V
Sbjct: 494 HRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEV 534
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 291 bits (744), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 240/420 (57%), Gaps = 15/420 (3%)
Query: 70 VRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQG 129
VR M+ ++D R + ITV G D+P P+K F D+ FP +L +K G + PTPIQ QG
Sbjct: 68 VRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQG 127
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDP---GDGPIVLVLAPTRELAV 186
P+ L GRD+IGIA TGSGKTL ++LP I+ + I+ P G+GPI LV+ P+RELA
Sbjct: 128 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAK 187
Query: 187 QIQQECTKFGAS------SRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH 240
Q +F AS R++S GGV Q+ ++KGV IV+ATPGRL D+L
Sbjct: 188 QTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKK 247
Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
+L L LDEADR++D+GF+ IR + + RQTL +SAT P +++ A L
Sbjct: 248 KMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALV 307
Query: 301 DPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGS-RILIFMDTKKGCDQ 359
P V +G AN + Q V+ V ++ K+V LLE + + +LIF + K D
Sbjct: 308 KPVTVNVGRAG-AANLDVIQEVEYVKQEA---KIVYLLECLQKTTPPVLIFCENKADVDD 363
Query: 360 ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINY 419
I L + G A++IHG K Q +RD+ +S FK+GK ++ ATDVA++GLD D+++VINY
Sbjct: 364 IHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINY 423
Query: 420 DFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFA-KELITILEEAGQRVSPDLAAMG 478
D PG +E+YVH F + +L +L+EA QR+ P LA +
Sbjct: 424 DMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELN 483
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/420 (39%), Positives = 242/420 (57%), Gaps = 15/420 (3%)
Query: 70 VRAMTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQG 129
+R M+ + D R + I V G D+P P+K F D+ FP VL+ +K+ G V+PTPIQ QG
Sbjct: 117 IRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQG 176
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDP---GDGPIVLVLAPTRELAV 186
P+ L GRD+IGIA TGSGKTL ++LP I+ + ++ P G+GPI L++ P+RELA
Sbjct: 177 LPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELAR 236
Query: 187 QIQQECTKFGASSR------IKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH 240
Q + +F A ++S GG+ Q+ +++GV IV+ATPGRL DML
Sbjct: 237 QTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 296
Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300
+L YL LDEADR++D+GF+ IR++ + RQTL +SAT P +++ AR L
Sbjct: 297 KMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALV 356
Query: 301 DPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGS-RILIFMDTKKGCDQ 359
P V +G AN + Q V+ V ++ K+V LLE + S +LIF + K D
Sbjct: 357 KPVTVNVGRAG-AANLDVIQEVEYVKQEA---KIVYLLECLQKTSPPVLIFCENKADVDD 412
Query: 360 ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINY 419
I L + G A++IHG K Q +R++ +S FK+GK ++ ATDVA++GLD D+++VINY
Sbjct: 413 IHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINY 472
Query: 420 DFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFA-KELITILEEAGQRVSPDLAAMG 478
D P +E+YVH F + +L +L+EA QR+ P LA +
Sbjct: 473 DMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELN 532
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 247/423 (58%), Gaps = 22/423 (5%)
Query: 73 MTEAEVDEYRLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPM 132
MTE + +R I+ +G +P+P++++ + +L+ V++AG+ +P+PIQ P+
Sbjct: 287 MTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPL 346
Query: 133 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL---DPGDGPIVLVLAPTRELAVQIQ 189
L+ RD+IGIAETGSGKT A++LP + +++ P + + +GP +V+APTRELA QI+
Sbjct: 347 GLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIE 406
Query: 190 QECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTY 249
+E KF + T I GG Q + +G EIVIATPGRLID LE + L + Y
Sbjct: 407 EETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNY 466
Query: 250 LVLDEADRMLDMGFDPQIRKIV-----SQIRPD------------RQTLYWSATWPKEVE 292
+VLDEADRM+DMGF+PQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 467 VVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVE 526
Query: 293 QLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMD 352
+LARK+L +P V IG+ K I Q+V ++ E +K+ +L KLL+++ + + I +F++
Sbjct: 527 RLARKYLRNPVVVTIGTAG-KTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAI-VFVN 584
Query: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 412
TKK CD I + L G+ ++HG KSQ +R+ L F++ + ++ ATDV RG+D+ D
Sbjct: 585 TKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPD 644
Query: 413 VKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSP 472
V +VINYD P +E Y H F T + +L +L ++ V P
Sbjct: 645 VAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPP 704
Query: 473 DLA 475
+LA
Sbjct: 705 ELA 707
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 199/346 (57%), Gaps = 8/346 (2%)
Query: 86 EITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAET 145
++ E D +P+ +FND+G E VL V + GF +P+ IQ + L+GRD+I A++
Sbjct: 22 KLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQS 81
Query: 146 GSGKTLAYLLPAIVHVNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGASSRIKST 204
G+GKT +++ ++ ++D + L+L+PTRELA Q ++ G + I++
Sbjct: 82 GTGKT------SMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAH 135
Query: 205 CIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFD 264
GG G +R L+ GV +V TPGR+ DM++ R + L+LDE+D ML GF
Sbjct: 136 ACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFK 195
Query: 265 PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDI 324
QI + + PD Q SAT P E+ ++ KF+ +P K+++ ++L + +V +
Sbjct: 196 DQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAV 255
Query: 325 VPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERD 384
E+ K+D L L D + ++ +IF +TK+ D ++ ++R + S+HGD Q ERD
Sbjct: 256 EKEEWKFDTLCDLY-DTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERD 314
Query: 385 WVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
+++EF+SG S ++ TDV ARG+DV+ V VINYD P + E Y+H
Sbjct: 315 AIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH 360
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 204/394 (51%), Gaps = 29/394 (7%)
Query: 122 PTPIQS--QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL---DPGDGPIVL 176
P P+++ + P+ L+ RD+IGI+ TGSGKT A++LP + +++ P + + +GP L
Sbjct: 223 PHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYAL 282
Query: 177 VLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
V+ PTRELA QI++E KF K+ I G Q L +G EIVIATPGRL+D
Sbjct: 283 VMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDC 342
Query: 237 LESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPD-----------------RQ 279
LE + L + YLVLDEADRM+DM F+PQ+ +++ + R
Sbjct: 343 LERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRT 402
Query: 280 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 339
T +SAT VE+LARKFL +P V IG + I Q V + E K+ +L KL++
Sbjct: 403 TYMFSATMLLSVERLARKFLRNPVVVTIG----ETTKFITQQVIMTKESDKFSRLKKLID 458
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDG-WPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
D+ D ++F++T+ D I + L G ++H KSQ +RD+ L EFK + ++
Sbjct: 459 DLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVL 518
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKE 458
TDV RGLD+ D+ VINYD P +++ Y H F T +
Sbjct: 519 VTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYG 578
Query: 459 LITILEEAGQRVSPDLAAMGRGAPPPPSGGFRDR 492
L L E V P+LA P G F DR
Sbjct: 579 LKQKLNECNSLVPPELARHEASKFKP--GTFPDR 610
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 194/336 (57%), Gaps = 9/336 (2%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
+ + P+ + E ++K G PIQ AL+GRD+I A+TG+GKTLA+ +P I
Sbjct: 104 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 163
Query: 161 VNAQP-----ILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQ 215
+ + G P LVLAPTRELA Q+++E + ++ + + C+YGGV Q
Sbjct: 164 LTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQ 221
Query: 216 VRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIR 275
L +GV++V+ TPGR+ID++E L V YLVLDEAD+ML +GF+ + I+ +
Sbjct: 222 QSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLP 281
Query: 276 PDRQTLYWSATWPKEVEQLARKFLYDPYKV-IIGSEDLKANHAIKQYVDIVPEKQKYDKL 334
RQ++ +SAT P V++LARK+L +P + ++G +D K IK Y K L
Sbjct: 282 TKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTIL 341
Query: 335 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGK 394
L+ G + ++F TK+ D+++ L + ++HGD SQ +R+ L+ F+ GK
Sbjct: 342 SDLITVYAKGGKTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGK 400
Query: 395 SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
++ ATDVA+RGLD+ +V VI+Y+ P E +VH
Sbjct: 401 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 436
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 194/336 (57%), Gaps = 9/336 (2%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
+ + P+ + E ++K G PIQ AL+GRD+I A+TG+GKTLA+ +P I
Sbjct: 104 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 163
Query: 161 VNAQP-----ILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQ 215
+ + G P LVLAPTRELA Q+++E + ++ + + C+YGGV Q
Sbjct: 164 LTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQ 221
Query: 216 VRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIR 275
L +GV++V+ TPGR+ID++E L V YLVLDEAD+ML +GF+ + I+ +
Sbjct: 222 QSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLP 281
Query: 276 PDRQTLYWSATWPKEVEQLARKFLYDPYKV-IIGSEDLKANHAIKQYVDIVPEKQKYDKL 334
RQ++ +SAT P V++LARK+L +P + ++G +D K IK Y K L
Sbjct: 282 TKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTIL 341
Query: 335 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGK 394
L+ G + ++F TK+ D+++ L + ++HGD SQ +R+ L+ F+ GK
Sbjct: 342 SDLITVYAKGGKTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGK 400
Query: 395 SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
++ ATDVA+RGLD+ +V VI+Y+ P E +VH
Sbjct: 401 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 436
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 199/337 (59%), Gaps = 10/337 (2%)
Query: 96 KPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKT--LAY 153
KP+K+F+D+G + VL V G+ +P+ IQ + LKGRD+I A++G+GKT +A
Sbjct: 19 KPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAI 78
Query: 154 LLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKG 213
+ IV+++++ + VLVL+P+RELA Q ++ GA + I++ GG G
Sbjct: 79 SVCQIVNISSRKVQ-------VLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIG 131
Query: 214 PQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ 273
++ L++GV V TPGR+ DM++ + V LVLDE+D ML G QI +
Sbjct: 132 EDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRA 191
Query: 274 IRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDK 333
+ D Q SAT P+E+ ++ KF+ DP ++++ ++L + YVD+ E+ K+D
Sbjct: 192 LPHDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDT 251
Query: 334 LVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSG 393
L L + I IF +T++ D +T ++R + S+HGDK Q ERD ++++F+S
Sbjct: 252 LCDLYGRLTINQAI-IFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSF 310
Query: 394 KSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
KS ++ A+DV ARG+DV+ V +VINYD P + E Y+H
Sbjct: 311 KSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIH 347
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 195/332 (58%), Gaps = 9/332 (2%)
Query: 103 DVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLP---AIV 159
D+G +++ +K G + PIQ A++GRD+IG A TG+GKTLA+ +P I+
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 160 HVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 219
NA+ G P LVLAPTRELA Q+++E + S + + C+YGG P G Q+R+L
Sbjct: 180 KFNAKH--GRGKNPQCLVLAPTRELARQVEKEFRESAPS--LDTICLYGGTPIGQQMREL 235
Query: 220 QKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 279
G+++ + TPGR+ID+++ NL V ++VLDEAD+ML +GF + I+ ++ RQ
Sbjct: 236 NYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQ 295
Query: 280 TLYWSATWPKEVEQLARKFLYDPYKV-IIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL 338
++ +SAT P + L +K+L +P + ++G D K I Y + + L+
Sbjct: 296 SMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLV 355
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
++ G + ++F TK+ D++ L + ++HGD SQA+R+ L+ F+ G I+
Sbjct: 356 KEHGKGGKCIVFTQTKRDADRLAFGL-AKSYKCEALHGDISQAQRERTLAGFRDGNFSIL 414
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
ATDVAARGLDV +V VI+Y+ P + E +VH
Sbjct: 415 VATDVAARGLDVPNVDLVIHYELPNNTETFVH 446
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 225/413 (54%), Gaps = 19/413 (4%)
Query: 25 APAASTGYGGSSIKNHDDGGSGSPRKINLDGLSHFEK---NFYTESPSVRAMTEAEVDEY 81
APAA T ++ D +G P + G+ HF+ +F S +E E
Sbjct: 34 APAA-TRVSDLALIGSSDVKAGFPFGVEAKGI-HFQSGPLDFRASMVSQAGFAISESSER 91
Query: 82 RLRREITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIG 141
R+ +V G + +++G +++ + G + PIQ A++GRD+IG
Sbjct: 92 RVGDSESVGGDGL-----AISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIG 146
Query: 142 IAETGSGKTLAYLLP---AIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGAS 198
A TG+GKTLA+ +P I+ NA+ G P+ LVLAPTRELA Q+++E + S
Sbjct: 147 RARTGTGKTLAFGIPIIDKIIKYNAKH--GRGRNPLCLVLAPTRELARQVEKEFRESAPS 204
Query: 199 SRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRM 258
+ + C+YGG P G Q+R L GV++ + TPGR+ID+++ NL V ++VLDEAD+M
Sbjct: 205 --LDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQM 262
Query: 259 LDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKV-IIGSEDLKANHA 317
L +GF + I+ ++ RQ++ +SAT P + L +K+L +P V ++G D K
Sbjct: 263 LQVGFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADG 322
Query: 318 IKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
I Y I + + L+ + G + ++F TK+ D+++ L + ++HGD
Sbjct: 323 ITTYSIIADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYAL-ARSFKCEALHGD 381
Query: 378 KSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
SQ++R+ L+ F+ G I+ ATDVAARGLDV +V +I+Y+ P + E +VH
Sbjct: 382 ISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVH 434
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 214/424 (50%), Gaps = 16/424 (3%)
Query: 60 EKNFYTESPSVRAMTEAEVDEYRLRREITV----EGRDVPKPVKTFNDVGFPEYVLEEVK 115
++ FY P + D LRR++ + +G VP PV TF G P +L ++
Sbjct: 72 DECFYVRDPG-----SSSHDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLE 126
Query: 116 KAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGD---G 172
AG+ PTPIQ Q P AL G+ L+ A+TGSGKT ++L+P I P D
Sbjct: 127 TAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN 186
Query: 173 PIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 232
P+ +VLAPTREL VQ++ + G K+ + GG P Q+ +Q+GVE++I TPGR
Sbjct: 187 PLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGR 246
Query: 233 LIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 292
++D+L H L + VLDE D ML GF Q+ +I Q Q L +SAT +EVE
Sbjct: 247 VVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFSATISREVE 305
Query: 293 QLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMD-GSRILIFM 351
++ + V IG+ + K N A+ Q V KQK KL +L ++++
Sbjct: 306 KVGGSLAKEIILVSIGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYV 364
Query: 352 DTKKGCDQITRQLR-MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDV 410
++ G D + + + G ALSIHG+K ER V+ F G+ P++ +T V RG+D+
Sbjct: 365 SSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDL 424
Query: 411 KDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRV 470
V+ VI +D P ++++Y+H F + +L+ L+ +G +
Sbjct: 425 LVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAI 484
Query: 471 SPDL 474
+L
Sbjct: 485 PKEL 488
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 214/424 (50%), Gaps = 16/424 (3%)
Query: 60 EKNFYTESPSVRAMTEAEVDEYRLRREITV----EGRDVPKPVKTFNDVGFPEYVLEEVK 115
++ FY P + D LRR++ + +G VP PV TF G P +L ++
Sbjct: 72 DECFYVRDPG-----SSSHDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLE 126
Query: 116 KAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGD---G 172
AG+ PTPIQ Q P AL G+ L+ A+TGSGKT ++L+P I P D
Sbjct: 127 TAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN 186
Query: 173 PIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 232
P+ +VLAPTREL VQ++ + G K+ + GG P Q+ +Q+GVE++I TPGR
Sbjct: 187 PLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGR 246
Query: 233 LIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 292
++D+L H L + VLDE D ML GF Q+ +I Q Q L +SAT +EVE
Sbjct: 247 VVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFSATISREVE 305
Query: 293 QLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMD-GSRILIFM 351
++ + V IG+ + K N A+ Q V KQK KL +L ++++
Sbjct: 306 KVGGSLAKEIILVSIGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYV 364
Query: 352 DTKKGCDQITRQLR-MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDV 410
++ G D + + + G ALSIHG+K ER V+ F G+ P++ +T V RG+D+
Sbjct: 365 SSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDL 424
Query: 411 KDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRV 470
V+ VI +D P ++++Y+H F + +L+ L+ +G +
Sbjct: 425 LVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAI 484
Query: 471 SPDL 474
+L
Sbjct: 485 PKEL 488
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 181/304 (59%), Gaps = 9/304 (2%)
Query: 133 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP-----ILDPGDGPIVLVLAPTRELAVQ 187
AL+GRD+I A+TG+GKTLA+ +P I + + G P LVLAPTRELA Q
Sbjct: 43 ALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQ 102
Query: 188 IQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRV 247
+++E + ++ + + C+YGGV Q L +GV++V+ TPGR+ID++E L V
Sbjct: 103 VEKEIKE--SAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEV 160
Query: 248 TYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKV-I 306
YLVLDEAD+ML +GF+ + I+ + RQ++ +SAT P V++LARK+L +P + +
Sbjct: 161 EYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDL 220
Query: 307 IGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G +D K IK Y K L L+ G + ++F TK+ D+++ L
Sbjct: 221 VGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALS- 279
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLE 426
+ ++HGD SQ +R+ L+ F+ GK ++ ATDVA+RGLD+ +V VI+Y+ P E
Sbjct: 280 NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPE 339
Query: 427 DYVH 430
+VH
Sbjct: 340 TFVH 343
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 199/342 (58%), Gaps = 12/342 (3%)
Query: 98 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
VKTF ++G E +++ ++ G+ P+ IQ++ P AL+G+D+IG+A+TGSGKT A+ +P
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIP- 66
Query: 158 IVHVNAQPILD--------PGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGG 209
I+ + + D P VL+PTRELA+QI ++ GA ++ + GG
Sbjct: 67 ILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGG 126
Query: 210 VPKGPQVRDLQKGVEIVIATPGRLID-MLESHHTNLRRVTYLVLDEADRMLDMGFDPQIR 268
+ + Q L K +++ATPGRL D M ++ +L+ + YLVLDEADR+L+ F+ +
Sbjct: 127 IDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLN 186
Query: 269 KIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEK 328
+I+ +I +R+T +SAT K+V +L R L +P K+ S+ +KQ V K
Sbjct: 187 QILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASK-YSTVDTLKQQYRFVAAK 245
Query: 329 QKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLS 388
K LV +L + M S +IF T G + LR G+ A+ I G +Q++R L+
Sbjct: 246 YKDCYLVYILSE-MPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALN 304
Query: 389 EFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
+FK+G+ I+ TDVA+RGLD+ V VINYD P + +DY+H
Sbjct: 305 KFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIH 346
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 199/382 (52%), Gaps = 24/382 (6%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F +G E+ +E K+ G +PTP+Q+ P L GRD++G+A+TGSGKT A+ LP I+H
Sbjct: 60 FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALP-ILH 118
Query: 161 VNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQ 220
A+ DP G LV+ PTRELA Q+ ++ G+ ++ + I GG+ Q L
Sbjct: 119 RLAE---DPY-GVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLV 174
Query: 221 KGVEIVIATPGRLIDMLESHHTN---LRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPD 277
IVI TPGR+ +LE++ R +LVLDEADR+LD+GF ++R I +
Sbjct: 175 SRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKS 234
Query: 278 RQTLYWSATWPKEVEQLA-----RKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYD 332
RQTL +SAT ++ L + + Y+ Y E LK + Q + K
Sbjct: 235 RQTLLFSATMTSNLQALLEHSSNKAYFYEAY------EGLKTVDTLTQQFIFEDKDAKEL 288
Query: 333 KLVKLLEDIMD-GSR-ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF 390
LV +L + D G R +IF+ T + C +++ L +++H SQ+ R LS+F
Sbjct: 289 YLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKF 348
Query: 391 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTA 450
KSGK PI+ ATDVA+RGLD+ V VINYD P DYVH T
Sbjct: 349 KSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITE 408
Query: 451 ANARFAKELITILEEAGQRVSP 472
+ + + I EE G+++ P
Sbjct: 409 TDVKLIHK---IEEEVGKKMEP 427
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 215/421 (51%), Gaps = 23/421 (5%)
Query: 61 KNFYTESPSVRAMTEAEVDEY-RLRREITVEGRDVPKPVKTFNDV----GFPEYVLEEVK 115
KN E+P + E D R + I V G ++P P+K+F ++ G Y+L +
Sbjct: 98 KNEIVENPKKELNRQMERDALSRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLA 157
Query: 116 KAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIV 175
+ GF EPTPIQ Q P+ L GR+ A TGSGKT A++ P ++ + +P DG
Sbjct: 158 ELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLK-RP---STDGIRA 213
Query: 176 LVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVR--DLQK-GVEIVIATPGR 232
++L+P RELA Q +E K IK + + + P V+ D K +++I+TP R
Sbjct: 214 VILSPARELAAQTAREGKKL-----IKGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMR 268
Query: 233 LIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQI-RPDRQTLYWSATWPKEV 291
L +++ +L +V YLVLDE+D++ + QI +V P +SAT P V
Sbjct: 269 LKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSV 328
Query: 292 EQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSR--ILI 349
E+LAR ++D +VIIG ++ A+ +KQ +V + KL+ L + + +LI
Sbjct: 329 EELARSIMHDAVRVIIGRKNT-ASETVKQ--KLVFAGSEEGKLLALRQSFAESLNPPVLI 385
Query: 350 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLD 409
F+ +K+ ++ +L+ + A IH D ER+ + +F++G+ ++ ATDV ARG+D
Sbjct: 386 FVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMD 445
Query: 410 VKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQR 469
K + VINYDFP S Y+H F+T + F + + + +G
Sbjct: 446 FKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCE 505
Query: 470 V 470
V
Sbjct: 506 V 506
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 178/332 (53%), Gaps = 6/332 (1%)
Query: 99 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
++F+ +G E +L + GF +P+ IQ +G KG D+I A++G+GKT + +
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 159 VHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRD 218
++ I LVLAPTRELA QI++ G +K GG R
Sbjct: 99 QQLDFSLIQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 153
Query: 219 LQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 278
LQ GV +V+ TPGR+ DML+ + VLDEAD ML GF QI I + P
Sbjct: 154 LQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 213
Query: 279 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL 338
Q +SAT P E ++ RKF+ P ++++ ++L + YV++ E+ K + L L
Sbjct: 214 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY 273
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
E + ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG S ++
Sbjct: 274 ETLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 332
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ ARG+DV+ V VIN+D P E+Y+H
Sbjct: 333 ITTDLLARGIDVQQVSLVINFDLPTQPENYLH 364
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 178/332 (53%), Gaps = 6/332 (1%)
Query: 99 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
++F+ +G E +L + GF +P+ IQ +G KG D+I A++G+GKT + +
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 159 VHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRD 218
++ I LVLAPTRELA QI++ G +K GG R
Sbjct: 99 QQLDFSLIQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 153
Query: 219 LQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 278
LQ GV +V+ TPGR+ DML+ + VLDEAD ML GF QI I + P
Sbjct: 154 LQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 213
Query: 279 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL 338
Q +SAT P E ++ RKF+ P ++++ ++L + YV++ E+ K + L L
Sbjct: 214 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY 273
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
E + ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG S ++
Sbjct: 274 ETLA-ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 332
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ ARG+DV+ V VIN+D P E+Y+H
Sbjct: 333 ITTDLLARGIDVQQVSLVINFDLPTQPENYLH 364
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 178/332 (53%), Gaps = 6/332 (1%)
Query: 99 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
++F+ +G E +L + GF +P+ IQ +G KG D+I A++G+GKT + +
Sbjct: 29 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 88
Query: 159 VHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRD 218
++ I LVLAPTRELA QI++ G +K GG R
Sbjct: 89 QQLDFSLIQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 143
Query: 219 LQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 278
LQ GV +V+ TPGR+ DML+ + VLDEAD ML GF QI I + P
Sbjct: 144 LQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 203
Query: 279 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL 338
Q +SAT P E ++ RKF+ P ++++ ++L + YV++ E+ K + L L
Sbjct: 204 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY 263
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
E + ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG S ++
Sbjct: 264 ETLA-ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 322
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ ARG+DV+ V VIN+D P E+Y+H
Sbjct: 323 ITTDLLARGIDVQQVSLVINFDLPTQPENYLH 354
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 184/332 (55%), Gaps = 6/332 (1%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F + V +KK G+ PTPIQ + P+ L G D++ +A TGSGKT A+L+P +
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 161 VNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQ 220
+ P G L+L+PTR+LA Q + + G + ++ + + GG Q +L
Sbjct: 90 LKQHV---PQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELT 146
Query: 221 KGVEIVIATPGRLIDML-ESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 279
KG +++IATPGRL+ +L E LR V Y+V DEAD + MGF Q+ +I++Q+ +RQ
Sbjct: 147 KGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQ 206
Query: 280 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL- 338
TL +SAT P + + A+ L +P V + E+ + ++ + PE +KY L+ L+
Sbjct: 207 TLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPE-EKYSALLYLVR 265
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
E I + LIF+ TK + + +++ +GD Q R +S F++ K+ ++
Sbjct: 266 EHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLL 325
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+AARG+D+ + VIN+DFP + +VH
Sbjct: 326 IVTDIAARGIDIPLLDNVINWDFPPRPKIFVH 357
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 196/348 (56%), Gaps = 18/348 (5%)
Query: 93 DVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLA 152
D P V F + P + E++K G PIQ+ + M L G DL+G A TG GKTLA
Sbjct: 93 DNPNAVSKFR-ISAP--LREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLA 149
Query: 153 YLLPAIVHVNAQPI-----LDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIY 207
++LP + + P + G P VLVL PTRELA Q+ + +G S + S C+Y
Sbjct: 150 FVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLY 209
Query: 208 GGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQI 267
GG Q L++GV+IV+ TPGR+ D +E + + + + VLDEAD ML MGF +
Sbjct: 210 GGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDV 269
Query: 268 RKIVSQIRPDR--QTLYWSATWPKEVEQLARKFLYDPYKVI--IGSEDLKANHAIKQYVD 323
I+ ++ QTL +SAT P V+ ++ +FL K I +G++ +KA+++++ ++
Sbjct: 270 ELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVR-HIA 328
Query: 324 IVPEKQKYDKLV-KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAE 382
I K +L+ ++ G + +IF +TK +++ L DG AL HG+ Q++
Sbjct: 329 IPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLL--DGSRAL--HGEIPQSQ 384
Query: 383 RDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
R+ L+ F++GK + AT+VAARGLD+ DV+ +I + P +E Y+H
Sbjct: 385 REVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIH 432
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 176/332 (53%), Gaps = 6/332 (1%)
Query: 99 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
++F+ +G E +L + GF +P+ IQ +G KG D+I A++G+GKT + +
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 159 VHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRD 218
++ + LVLAPTRELA QI++ G +K GG R
Sbjct: 99 QQLDYALLQCQA-----LVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRI 153
Query: 219 LQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 278
LQ GV +V+ TPGR+ DML + VLDEAD ML GF QI I + P
Sbjct: 154 LQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 213
Query: 279 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL 338
Q +SAT P E ++ RKF+ P ++++ ++L + YV++ E K + L L
Sbjct: 214 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLY 273
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
E + ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG S ++
Sbjct: 274 ETLA-ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 332
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ ARG+DV+ V VIN+D P E+Y+H
Sbjct: 333 ITTDLLARGIDVQQVSLVINFDLPTQPENYLH 364
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 177/332 (53%), Gaps = 11/332 (3%)
Query: 99 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
++F+ +G E +L GF +P+ IQ +G KG D+I A++G+GKT + +
Sbjct: 39 ESFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 93
Query: 159 VHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRD 218
++ I LVLAPTRELA QI++ G +K GG R
Sbjct: 94 QQLDFSLIQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 148
Query: 219 LQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 278
LQ GV +V+ TPGR+ DML+ + VLDEAD ML GF QI I + P
Sbjct: 149 LQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 208
Query: 279 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL 338
Q +SAT P E ++ RKF+ P ++++ ++L + YV++ E+ K + L L
Sbjct: 209 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY 268
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
E + ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG S ++
Sbjct: 269 E-TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 327
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ ARG+DV+ V VIN+D P E+Y+H
Sbjct: 328 ITTDLLARGIDVQQVSLVINFDLPTQPENYLH 359
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 173/332 (52%), Gaps = 12/332 (3%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F D +L + + GF P+PIQ + P+AL GRD++ A+ G+GKT A+ +P +
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 161 VNAQPILDPGDGPIV--LVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRD 218
++ D ++ +++ PTRELA+Q Q C + G +I+ GG +
Sbjct: 193 IDQ-------DNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMR 245
Query: 219 LQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 278
L + V +++ TPGR++D+ + L+ + LV+DEAD++L F P + ++S + R
Sbjct: 246 LYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESR 305
Query: 279 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL 338
Q L +SAT+P V+ +FL +PY +I D I Q+ V E+QK L L
Sbjct: 306 QILMFSATFPVTVKDFKDRFLTNPY--VINLMDELTLKGITQFYAFVEERQKIHCLNTLF 363
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
+ I IF ++ + + +++ G+ IH Q R+ V +F++G +
Sbjct: 364 SKLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 422
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ RG+D++ V VIN+DFP + E Y+H
Sbjct: 423 VCTDLFTRGIDIQAVNVVINFDFPKNAETYLH 454
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 173/332 (52%), Gaps = 12/332 (3%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F D +L + + GF P+PIQ + P+AL GRD++ A+ G+GKT A+ +P +
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 161 VNAQPILDPGDGPIV--LVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRD 218
++ D ++ +++ PTRELA+Q Q C + G +I+ GG +
Sbjct: 193 IDQ-------DNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMR 245
Query: 219 LQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 278
L + V +++ TPGR++D+ + L+ + LV+DEAD++L F P + ++S + R
Sbjct: 246 LYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESR 305
Query: 279 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL 338
Q L +SAT+P V+ +FL +PY +I D I Q+ V E+QK L L
Sbjct: 306 QILMFSATFPVTVKDFKDRFLTNPY--VINLMDELTLKGITQFYAFVEERQKIHCLNTLF 363
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
+ I IF ++ + + +++ G+ IH Q R+ V +F++G +
Sbjct: 364 SKLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 422
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ RG+D++ V VIN+DFP + E Y+H
Sbjct: 423 VCTDLFTRGIDIQAVNVVINFDFPKNAETYLH 454
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 175/332 (52%), Gaps = 11/332 (3%)
Query: 99 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
++F+ +G E +L GF +P+ IQ +G KG D+I A++G+GKT + +
Sbjct: 39 ESFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 93
Query: 159 VHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRD 218
++ + LVLAPTRELA QI++ G +K GG R
Sbjct: 94 QQLDYALLQCQA-----LVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRI 148
Query: 219 LQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 278
LQ GV +V+ TPGR+ DML + VLDEAD ML GF QI I + P
Sbjct: 149 LQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 208
Query: 279 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLL 338
Q +SAT P E ++ RKF+ P ++++ ++L + YV++ E K + L L
Sbjct: 209 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLY 268
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIM 398
E + ++ +IF++T++ D +T ++R + HGD Q RD ++ EF+SG S ++
Sbjct: 269 ETLA-ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 327
Query: 399 TATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ ARG+DV+ V VIN+D P E+Y+H
Sbjct: 328 ITTDLLARGIDVQQVSLVINFDLPTQPENYLH 359
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 180/356 (50%), Gaps = 15/356 (4%)
Query: 128 QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGD---GPIVLVLAPTREL 184
Q P AL G+ L+ A+TGSGKT ++L+P I P D P+ +VLAPTREL
Sbjct: 2 QAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTREL 61
Query: 185 AVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNL 244
VQ++ + G K+ + GG P Q+ +Q+GVE++I TPGR++D+L H L
Sbjct: 62 CVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIEL 121
Query: 245 RRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYK 304
+ VLDE D ML GF Q+ +I Q Q L +SAT +EVE++ +
Sbjct: 122 DNIMTFVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFSATISREVEKVGGSLAKEIIL 180
Query: 305 VIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSR-----ILIFMDTKKGCDQ 359
V IG+ + K N A+ Q V KQK KL DI+ ++++ ++ G D
Sbjct: 181 VSIGNPN-KPNKAVNQLAIWVDAKQKKQKLF----DILRSQNHFKPPAVVYVSSRVGADL 235
Query: 360 ITRQLR-MDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVIN 418
+ + + G ALSIHG+K ER V+ F G+ P++ +T V RG+D+ V+ VI
Sbjct: 236 LANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIV 295
Query: 419 YDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELITILEEAGQRVSPDL 474
+D P ++++Y+H F + +L+ L+ +G + +L
Sbjct: 296 FDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKEL 351
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 186/340 (54%), Gaps = 15/340 (4%)
Query: 99 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
KTF + + + +K+ GF T IQ++ P + G D++G A TGSGKTLA+L+PA
Sbjct: 154 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPA- 212
Query: 159 VHVNAQPILDPGDGPIVLVLAPTRELAVQ---IQQECTKFGASSRIKSTCIYGGVPKGPQ 215
V + + P +G VLV+ PTRELA+Q + +E K+ + + K + GG + +
Sbjct: 213 VELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGK---VIGGEKRKTE 269
Query: 216 VRDLQKGVEIVIATPGRLIDMLESHHTN---LRRVTYLVLDEADRMLDMGFDPQIRKIVS 272
L KGV +++ATPGRL+D LE +TN + + +LV+DEADR+L+ F+ ++KI++
Sbjct: 270 AEILAKGVNLLVATPGRLLDHLE--NTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILN 327
Query: 273 QIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVII--GSEDLKANHAIKQYVDIVPEKQK 330
+ RQT +SAT +VE LAR L P + + G +++ N ++Q +VP +
Sbjct: 328 LLPKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEV-TNEGLEQGYCVVPSAMR 386
Query: 331 YDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF 390
L+ L+ +I++F T K R + L I G Q +R +F
Sbjct: 387 LLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQF 446
Query: 391 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
++ I+ T+VAARGLD V +++ YD P + DY+H
Sbjct: 447 IKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIH 486
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 10/331 (3%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F D +L+ + + GF +P+PIQ + P+AL G D++ A+ G+GKT A+ +P +
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 161 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 219
+ DP + I ++L PTRELA+Q Q C + I+ GG + L
Sbjct: 186 I------DPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRL 239
Query: 220 QKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 279
+ V +++ TPGR++D+ + L+ LV+DEAD++L F P + +++ + +RQ
Sbjct: 240 HQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQ 299
Query: 280 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 339
L +SAT+P V+ + L PY +I D + QY V E+QK L L
Sbjct: 300 FLMFSATFPVTVKAFKDRHLRKPY--VINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFS 357
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 399
+ I IF ++ + + +++ G+ IH Q R+ V EF++G +
Sbjct: 358 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLV 416
Query: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ RG+D++ V VIN+DFP + E Y+H
Sbjct: 417 CTDLFTRGIDIQAVNVVINFDFPRTSESYLH 447
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 10/331 (3%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F D +L+ + + GF +P+PIQ + P+AL G D++ A+ G+GKT A+ +P +
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 161 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 219
+ DP + I ++L PTRELA+Q Q C + I+ GG + L
Sbjct: 186 I------DPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRL 239
Query: 220 QKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 279
+ V +++ TPGR++D+ + L+ LV+DEAD++L F P + +++ + +RQ
Sbjct: 240 HQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQ 299
Query: 280 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 339
L +SAT+P V+ + L PY +I D + QY V E+QK L L
Sbjct: 300 FLMFSATFPVTVKAFKDRHLRKPY--VINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFS 357
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 399
+ I IF ++ + + +++ G+ IH Q R+ V EF++G +
Sbjct: 358 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLV 416
Query: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ RG+D++ V VIN+DFP + E Y+H
Sbjct: 417 CTDLFTRGIDIQAVNVVINFDFPRTSESYLH 447
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 177/350 (50%), Gaps = 6/350 (1%)
Query: 110 VLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDP 169
+L + GF +P+ IQ +G KG D+I A++G+GKT + + ++ +
Sbjct: 52 LLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQ 111
Query: 170 GDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIAT 229
LVLAPTRELA QI++ G +K+ GG R LQ GV +V+ T
Sbjct: 112 A-----LVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGT 166
Query: 230 PGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPK 289
PGR+ D+L + VLDEAD ML GF QI I + Q +SAT P
Sbjct: 167 PGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPP 226
Query: 290 EVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILI 349
E ++ RKF+ P ++++ ++L + YV++ E+ K + L L E + ++ +I
Sbjct: 227 EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLA-ITQSVI 285
Query: 350 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLD 409
F++T++ D +T ++R + HGD Q RD ++ EF+SG S ++ TD+ ARG+D
Sbjct: 286 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 345
Query: 410 VKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKEL 459
V+ V VIN+D P E+Y+H F T+ + R ++
Sbjct: 346 VQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADI 395
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 171/331 (51%), Gaps = 10/331 (3%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F D +L + + GF +P+PIQ + P+AL G D++ A+ G+GKT A+ +P +
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215
Query: 161 VNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 219
+ DP + I ++L PTRELA+Q Q C + +I+ GG + L
Sbjct: 216 I------DPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRL 269
Query: 220 QKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQ 279
+ V +++ TPGR++D+ + L+ LV+DEAD++L + F P I +++ + RQ
Sbjct: 270 YQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQ 329
Query: 280 TLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLE 339
L +SAT+P V+ ++L PY II D + QY V E+QK L L
Sbjct: 330 ILMFSATFPVTVKSFKDRYLKKPY--IINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFS 387
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMT 399
+ I IF ++ + + +++ G+ IH Q R+ V +F++G +
Sbjct: 388 KLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLV 446
Query: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
TD+ RG+D++ V VIN+DFP + E Y+H
Sbjct: 447 CTDLFTRGIDIQAVNVVINFDFPRTSESYLH 477
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 177/333 (53%), Gaps = 4/333 (1%)
Query: 100 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
TF ++ +L + G+ +PTPIQ+ P+AL GRDL A TGSGKT A+ LP +
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 160 HVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDL 219
+ +P VL+L PTRELAVQI + IK I GG+ Q L
Sbjct: 228 RLLFRP--KRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVL 285
Query: 220 QKGVEIVIATPGRLIDML-ESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDR 278
+ +IV+ATPGR+ID L S +L + L+LDEADR+L GF +I ++V R
Sbjct: 286 RSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRR 345
Query: 279 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKL- 337
QT+ +SAT +EV++L + L P ++ + ++ V I ++ + V L
Sbjct: 346 QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 405
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPI 397
L S+++IF TK+ ++ + G A +HG+ +QA+R L F+ +
Sbjct: 406 LCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDF 465
Query: 398 MTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
+ ATDVAARGLD+ V+ VINY P ++ YVH
Sbjct: 466 LIATDVAARGLDIIGVQTVINYACPREIDSYVH 498
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 183/348 (52%), Gaps = 5/348 (1%)
Query: 85 REITVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAE 144
+ I + G+ + V TF+ + E +K+ GF T IQ+ L+G+D++G A
Sbjct: 76 KNIVIVGKGIMTNV-TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAAR 134
Query: 145 TGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKST 204
TGSGKTLA+L+PA V + + P +G V+V+ PTRELA+Q + + +
Sbjct: 135 TGSGKTLAFLIPA-VELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVS 193
Query: 205 CIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNL-RRVTYLVLDEADRMLDMGF 263
+ GG + + + + G +VIATPGRL+D L++ + + + LV+DEADR+L+ F
Sbjct: 194 MVIGGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENF 253
Query: 264 DPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLK-ANHAIKQYV 322
+ + KI+ + RQT +SAT +V+ LAR L P V + K N ++Q
Sbjct: 254 EEDMNKILKILPKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGY 313
Query: 323 DIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAE 382
+VP KQ+ L+ L+ ++ +I++F T K T +++ IHG Q
Sbjct: 314 CVVPSKQRLILLISFLKKNLN-KKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNR 372
Query: 383 RDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
R +F K I+ TDVAARGLD+ V ++I YD P +Y+H
Sbjct: 373 RTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIH 420
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 208/395 (52%), Gaps = 19/395 (4%)
Query: 98 VKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
V+ F + + +K A +V+ T +QS P AL GRD++G A TGSGKTLA+++P
Sbjct: 70 VRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPI 129
Query: 158 IVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVR 217
+ ++ + P DG ++++PTRELA Q K G + + + GG +
Sbjct: 130 LEKLHRER-WSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEK 188
Query: 218 DLQKGVEIVIATPGRLID-MLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRP 276
+ + I++ PGRL+ M E+ + ++ L+LDEADR+LD F Q+ I+SQ+
Sbjct: 189 ERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPK 248
Query: 277 DRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKAN-HAIKQYVDIVPEKQKYDKLV 335
RQTL +SAT K+V+ LAR L DP + + +E + A ++ Q V IVP ++K D L
Sbjct: 249 HRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLW 308
Query: 336 KLLEDIMDGSRILIFMDTKKGCD---QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKS 392
++ ++ SRIL+F+ TKK + +LR G P S+HG SQ +R V S+F
Sbjct: 309 SFIKTHLN-SRILVFLSTKKQVKFVHEAFNKLR-PGIPLKSLHGKMSQEKRMGVYSQFIE 366
Query: 393 GKSPIMTATDVAARGLDV-KDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAA 451
+S ++ TDV ARGLD K V +V+ D P + Y+H F T +
Sbjct: 367 RQS-VLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPS 425
Query: 452 NARFAKEL------ITILEEAGQR---VSPDLAAM 477
+ ++L I +++ Q+ VS LAA+
Sbjct: 426 EEKMIEKLQEAKVPIKLIKANNQKLQEVSRLLAAL 460
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 182/352 (51%), Gaps = 18/352 (5%)
Query: 89 VEGRDVPKPVKTFNDVGFPEYVLE-----EVKKAGFVEPTPIQSQGWPMALKGRDLIGIA 143
V G V K + GF +++L+ + +GF P+ +Q + P A+ G D+I A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 144 ETGSGKTLAYLLPAIVHVNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGAS-SRI 201
++G GKT ++L + + +P G + LVL TRELA QI E +F
Sbjct: 91 KSGMGKTAVFVLSTLQQI------EPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDT 144
Query: 202 KSTCIYGGVPKGPQVRDLQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRML 259
K + YGGV +DL K IV+ TPGR++ + +L+ V + +LDE D+ML
Sbjct: 145 KVSVFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 203
Query: 260 D-MGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAI 318
+ + +++I D+Q + +SAT KE+ + +KF+ DP ++ + E H +
Sbjct: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
Query: 319 KQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDK 378
Q+ + E +K KL LL D +D ++++IF+ + ++ + L +P++ IH
Sbjct: 264 VQHYIKLSEMEKNRKLNDLL-DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
Query: 379 SQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
SQ ER FK G I+ ATD+ RG+D++ V VINYD P S + Y+H
Sbjct: 323 SQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 182/352 (51%), Gaps = 18/352 (5%)
Query: 89 VEGRDVPKPVKTFNDVGFPEYVLE-----EVKKAGFVEPTPIQSQGWPMALKGRDLIGIA 143
V G V K + GF +++L+ + +GF P+ +Q + P A+ G D+I A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 144 ETGSGKTLAYLLPAIVHVNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGAS-SRI 201
++G GKT ++L + + +P G + LVL TRELA QI E +F
Sbjct: 91 KSGMGKTAVFVLSTLQQI------EPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDT 144
Query: 202 KSTCIYGGVPKGPQVRDLQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRML 259
K + YGGV +DL K IV+ TPGR++ + +L+ V + +LDE D+ML
Sbjct: 145 KVSVFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 203
Query: 260 D-MGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAI 318
+ + +++I D+Q + +SAT KE+ + +KF+ DP ++ + E H +
Sbjct: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
Query: 319 KQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDK 378
Q+ + E +K KL LL D +D ++++IF+ + ++ + L +P++ IH
Sbjct: 264 VQHYIKLSEMEKNRKLNDLL-DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
Query: 379 SQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
SQ ER FK G I+ ATD+ RG+D++ V VINYD P S + Y+H
Sbjct: 323 SQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 374
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 175/333 (52%), Gaps = 13/333 (3%)
Query: 111 LEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPG 170
L+ +K AG+ T +Q P+ LKG+D++ A+TG+GKT+A+LLP+I V P P
Sbjct: 332 LKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPD 391
Query: 171 DG--PIV-LVLAPTRELAVQIQQEC-TKFGASSRIKSTCIYGGVPKGPQVRDLQKG-VEI 225
+ PI+ LV+ PTRELA Q E T I + GG G + + +Q +I
Sbjct: 392 NKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQI 451
Query: 226 VIATPGRLIDMLES---HHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLY 282
++ATPGRL D +E+ T L+ V LVLDEAD +LDMGF I +I+S + +RQT
Sbjct: 452 LVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPKERQTFL 511
Query: 283 WSATWPKEVEQLARKFLYDPYKVI--IGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLED 340
+SAT P+EV Q+ L ++ + + ++ + ++Q I + + L LL +
Sbjct: 512 FSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSLLYTLLRE 571
Query: 341 IMDGS---RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPI 397
+ G+ ++++F T + L IH K Q+ R V +EF+ K I
Sbjct: 572 HIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNEFRKSKGLI 631
Query: 398 MTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
+ +DV+ARG+D DV V+ P E Y+H
Sbjct: 632 LVTSDVSARGVDYPDVTLVLQVGLPKDREQYIH 664
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 180/351 (51%), Gaps = 18/351 (5%)
Query: 96 KPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLL 155
K V+ F ++G E V+ +++ PT IQ G P ++ + ++ + TGSGKTLAYLL
Sbjct: 109 KLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLL 168
Query: 156 PAIVHVNAQPILDPGDG-----PIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGV 210
P IV + + + G P +VL PTREL+ Q+ + +R +S + GG
Sbjct: 169 P-IVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGS 227
Query: 211 PKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKI 270
PQ L +++V+ TPGR++ +E + + YLVLDEAD M D GF P+IRK
Sbjct: 228 RIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKF 287
Query: 271 VSQIRPDR--------QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYV 322
++ + QT+ +AT V++L + + + K +A ++
Sbjct: 288 LAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFI 347
Query: 323 DIVPEKQKYDKLVKLLE-DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQA 381
+ + K + L+++LE + GS++++F +T + L + ++ HG+
Sbjct: 348 KLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAE 407
Query: 382 ERDWVLSEFK--SGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
+R L +FK G P + TD+AARGLD+ DV +V+ +DFP + DY+H
Sbjct: 408 QRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLH 457
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 170/343 (49%), Gaps = 13/343 (3%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F+ L+ +K AGF T +Q P+ L+G+D++ A+TG+GKT+A+LLPAI
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 161 VNAQP--ILDPGDGPI-VLVLAPTRELAVQIQQEC-TKFGASSRIKSTCIYGGVPKGPQV 216
V P D PI VLV+ PTRELA Q E T I + GG +
Sbjct: 444 VIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQ 503
Query: 217 RDLQKG-VEIVIATPGRLIDMLESHH---TNLRRVTYLVLDEADRMLDMGFDPQIRKIVS 272
R +Q +I++ATPGRL D +E+ T L V LVLDEAD +LDMGF I +I++
Sbjct: 504 RRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIA 563
Query: 273 QIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI--IGSEDLKANHAIKQYVDIVPEKQK 330
+ RQT +SAT P+EV Q+ L ++ I + + + + Q I +
Sbjct: 564 AVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRH 623
Query: 331 YDKL-VKLLEDIMDGS--RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVL 387
+ L V L E I D +++IF T + L IH K Q+ R V
Sbjct: 624 FSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVS 683
Query: 388 SEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
EF+ K+ I+ +DV+ARG+D DV V+ P E Y+H
Sbjct: 684 DEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIH 726
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 187/352 (53%), Gaps = 16/352 (4%)
Query: 92 RDVPKPVKTFNDVGFP--EYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGK 149
+ + K + F+++ P E ++E + ++GF TP+Q++ P +D++ A TGSGK
Sbjct: 7 KTITKALPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGK 66
Query: 150 TLAYLLPAIVHVNAQPILDPGDGPIV-LVLAPTRELAVQIQQECTKFGAS-SRIKSTCIY 207
TLA+LLP I + P ++ ++++PTREL+ QI + F ++ + S +
Sbjct: 67 TLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLV 126
Query: 208 GGVPKGPQVRDLQK-GVEIVIATPGRLIDMLES-HHTNLRRVTYLVLDEADRMLDMGFDP 265
GG + L++ G ++I TPGRL DM++ + R + L+LDEADR+LDMGF
Sbjct: 127 GGREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQK 186
Query: 266 QIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIV 325
Q+ I+S++ R+T +SAT + V LA+ L + +VI G+E K+ + Y + +
Sbjct: 187 QVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAES-KSKTSSGLYCEYL 245
Query: 326 PEK--QKYDKLVKLLEDIMDGSRILIFMDTKKGCDQ-----ITRQLRMDGWPALSIHGDK 378
+ QK +LV LL + + ++ FM C +++ + S HG
Sbjct: 246 KCEADQKSSQLVHLLIENKNKKLVVFFMTC--ACVDYWGLVLSKIPTLKSISFFSTHGKM 303
Query: 379 SQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
Q RD L+ F S ++ TDVAARGLD+ + YV+ YD P + ++H
Sbjct: 304 DQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIH 355
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 172/345 (49%), Gaps = 17/345 (4%)
Query: 101 FNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F+ L+ ++ AGF T +Q P+ L+G+D++ A+TG+GKT+A+LLP+I
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 161 V-NAQPILDPGDGP--IVLVLAPTRELAVQIQQECT---KFGASSRIKSTCIYGGVPKGP 214
V A P P IVLV+ PTRELA Q E K+ S I + GG
Sbjct: 142 VIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPS--IGVQVVIGGTKLPT 199
Query: 215 QVRDLQKG-VEIVIATPGRL---IDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKI 270
+ R LQK +I++ATPGRL ID T L V LVLDEAD +LDMGF +I +I
Sbjct: 200 EQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERI 259
Query: 271 VSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSED--LKANHAIKQYVDIVPEK 328
++ + RQT +SAT EV Q+ L ++ + ++ + + + Q I
Sbjct: 260 IAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLD 319
Query: 329 QKYDKLVKLLED-IMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDW 385
+ + L LL+ I D G +++IF T + L IH K Q+ R
Sbjct: 320 RHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTR 379
Query: 386 VLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
V EF+ KS I+ +DV+ARG+D DV V+ P E Y+H
Sbjct: 380 VSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIH 424
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 194/430 (45%), Gaps = 87/430 (20%)
Query: 85 REITVEGRDVPKPVK------TFNDVGFPEYVLEEVK-KAGFVEPTPIQSQGWPMALKGR 137
RE E +D K +F+ +G + +++K + GF PT +Q+Q P+ L GR
Sbjct: 9 RETKQEAKDASKAKSGLFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGR 68
Query: 138 DLIGIAETGSGKTLAYLLPAIVHVNAQ-PILDPGDGPIVLVLAPTRELAVQIQQECTKFG 196
D++ A TG+GKT+AYL P I H+ P +D G LV+ PTREL +Q+ + K
Sbjct: 69 DVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLL 128
Query: 197 ASSR-IKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH----HTNLRRVTYLV 251
I + GG K + L+KG+ I+IATPGRL+D L++ H NLR +++
Sbjct: 129 HRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLR---WVI 185
Query: 252 LDEADRMLDMGFDPQIRKIVS-------------QIRP---DRQTLYWSATWPKEVEQLA 295
DEAD +L++G+ +I +I+ I P +Q L SAT +V LA
Sbjct: 186 FDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLA 245
Query: 296 RKFLYDPYKVIIGSEDLKANHAIK----------------------------------QY 321
+ L DP + + + L+ N +I+ Q
Sbjct: 246 KLSLDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQR 305
Query: 322 VDIVPEKQKYDKLVKLLEDIMD---GSRILIFMDTKKGCDQITRQLRMDGWP-------- 370
VP + L+ +L+++ + ++++F T+ D L WP
Sbjct: 306 YLRVPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEE 365
Query: 371 ----------ALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYD 420
+HG Q +R FK+ K ++ +TDVAARGLD V+ +I YD
Sbjct: 366 GTKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYD 425
Query: 421 FPGSLEDYVH 430
PG +YVH
Sbjct: 426 CPGEATEYVH 435
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 182/393 (46%), Gaps = 59/393 (15%)
Query: 89 VEGRDVPKPVKTFNDVGFPEYVLE-----EVKKAGFVEPTPIQSQGWPMALKGRDLIGIA 143
V G V K + GF +++L+ + +GF P+ +Q + P A+ G D+I A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 144 ETGSGKTLAYLLPAIVHVNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGAS-SRI 201
++G GKT ++L + + +P G + LVL TRELA QI E +F
Sbjct: 91 KSGMGKTAVFVLSTLQQI------EPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDT 144
Query: 202 KSTCIYGGVPKGPQVRDLQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRML 259
K + YGGV +DL K IV+ TPGR++ + +L+ V + +LDE D+ML
Sbjct: 145 KVSVFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 203
Query: 260 D-MGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFL------------------- 299
+ + +++I D+Q + +SAT KE+ + +KF+
Sbjct: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGF 263
Query: 300 ----------------------YDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKL 337
DP ++ + E H + Q+ + E +K KL L
Sbjct: 264 GSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDL 323
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPI 397
L D +D ++++IF+ + ++ + L +P++ IH SQ ER FK G I
Sbjct: 324 L-DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 382
Query: 398 MTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
+ ATD+ RG+D++ V VINYD P S + Y+H
Sbjct: 383 LVATDLVGRGIDIERVNIVINYDMPDSADTYLH 415
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 177/357 (49%), Gaps = 18/357 (5%)
Query: 90 EGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGK 149
E D K F++ L+ + +G V+ T +Q L G+D + A+TG+GK
Sbjct: 366 EPHDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGK 425
Query: 150 TLAYLLPAIVHVNAQPILDPGDG-----PI-VLVLAPTRELAVQIQQECTKFGASSR-IK 202
++A+LLPAI V ++ G G PI VL+L PTRELA QI E + I
Sbjct: 426 SMAFLLPAIETV--LKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIG 483
Query: 203 STCIYGGVP-KGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTYLVLDEADRM 258
+ GG + Q R + +I+IATPGRL+D +E+ + L + ++DEAD +
Sbjct: 484 VQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLL 543
Query: 259 LDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI--IGSEDLKANH 316
LD+GF + KI+ + RQ+L +SAT PKEV ++++ L + I IG ++ +
Sbjct: 544 LDLGFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHD 603
Query: 317 AIKQYVDIVPEKQKYDKLVKLLEDIMDGS---RILIFMDTKKGCDQITRQLRMDGWPALS 373
+KQ + P + + + LL++ ++ +I++F T + LR
Sbjct: 604 KVKQSCIVAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVRE 663
Query: 374 IHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
IH K Q R V EFK I+ +DV+ARG++ DV VI P E Y+H
Sbjct: 664 IHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIH 720
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 13/298 (4%)
Query: 138 DLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFG 196
D+I A++G GKT ++L + + +P G + LVL TRELA QI E +F
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQI------EPSPGQVSALVLCHTRELAYQICNEFVRFS 55
Query: 197 ASS-RIKSTCIYGGVPKGPQVRDLQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLD 253
K + YGGV +DL K IV+ TPGR++ + +L+ V + +LD
Sbjct: 56 TYLPDTKVSVFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILD 114
Query: 254 EADRMLD-MGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDL 312
E D+ML+ + +++I D+Q + +SAT KE+ + +KF+ DP ++ + E
Sbjct: 115 ECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK 174
Query: 313 KANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 372
H + Q+ + E +K KL LL D +D ++++IF+ + ++ + L +P++
Sbjct: 175 LTLHGLVQHYIKLSEMEKNRKLNDLL-DALDFNQVVIFVKSVSRAAELNKLLVECNFPSI 233
Query: 373 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
IH SQ ER FK G I+ ATD+ RG+D++ V VINYD P S + Y+H
Sbjct: 234 CIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 291
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 179/358 (50%), Gaps = 20/358 (5%)
Query: 90 EGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGK 149
E D K F++ L+ + +G ++ T +Q L G+D + A+TG+GK
Sbjct: 319 EPHDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGK 378
Query: 150 TLAYLLPAIVHVNAQPILDPGDG-----PI-VLVLAPTRELAVQIQQE---CTKFGASSR 200
++A+LLPAI V ++ G G PI L+L PTRELA QI E KF
Sbjct: 379 SMAFLLPAIETV--LKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIG 436
Query: 201 IKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTYLVLDEADR 257
++ T I G K Q R + +I+IATPGRL+D +E+ + L + ++DEAD
Sbjct: 437 VQ-TLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADL 495
Query: 258 MLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVI--IGSEDLKAN 315
+LD+GF + KI+ + RQ+L +SAT PKEV ++++ L + I IG ++ +
Sbjct: 496 LLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETH 555
Query: 316 HAIKQYVDIVPEKQKYDKLVKLLEDIMDGS---RILIFMDTKKGCDQITRQLRMDGWPAL 372
++Q + P + + + LL++ ++ + +I++F T + LR
Sbjct: 556 DKVRQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVR 615
Query: 373 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
IH K Q R V EFK I+ +DV+ARG++ DV VI P E Y+H
Sbjct: 616 EIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIH 673
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 177/343 (51%), Gaps = 27/343 (7%)
Query: 110 VLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDP 169
++E + ++ F TP+Q+ P+ +D+ A TGSGKTLA+++P + + P
Sbjct: 27 IIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPP 86
Query: 170 GDGPIV-LVLAPTRELAVQIQQECTKFGAS-SRIKSTCIYGGVPKGPQVRDLQK-GVEIV 226
++ ++++PTREL+ QI F ++ + + S + GG ++ +++ G ++
Sbjct: 87 KPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVL 146
Query: 227 IATPGRLIDMLESHHT-NLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSA 285
I TPGRL D++E + R + L+LDEADR+L+MGF Q+ I+S++ R+T +SA
Sbjct: 147 IGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTGLFSA 206
Query: 286 TWPKEVEQLARKFLYDPYKVII-------GSEDLKANHAIK----QYVDIVPEKQKYDKL 334
T + VE+LA+ L +P +V + S+ L + +Y++ +K K +L
Sbjct: 207 TQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADK-KSSQL 265
Query: 335 VKLLEDIMDGSRILIFMDTKKGCDQITR-QLRMDGWPALS------IHGDKSQAERDWVL 387
V LL D I+ FM C + L + PAL IHGD Q RD L
Sbjct: 266 VDLLIKNSDKKLIVFFM----TCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKAL 321
Query: 388 SEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
+ F S + TDVAARGLD+ + YV+ YD P + H
Sbjct: 322 ASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNH 364
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 175/385 (45%), Gaps = 54/385 (14%)
Query: 99 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K+F ++G P+ +L+ +++ GF PT +QS P +KG D + + TGSGKTLAYLLP +
Sbjct: 110 KSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPIL 169
Query: 159 VHV--------NAQPILDPGDGPIVLVLAPTRELAVQIQQECTK-FGASSRIKSTCIYGG 209
+ ++ D +++AP+REL +QI +E K G R + GG
Sbjct: 170 SEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGG 229
Query: 210 VPKGPQVRDLQKGV-EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIR 268
+ Q L+K IV+ TPGR+ ++ + + +LVLDE D +L F I
Sbjct: 230 ANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIH 289
Query: 269 KIVSQI--------------RPDRQTLYWSATWPKEVEQLARKFLYDPYKV--------- 305
+I+ + R +RQT+ SAT P V + A+ + ++P V
Sbjct: 290 RILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLD 349
Query: 306 --------------------IIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGS 345
I + A+K Y I + K D L + + +D
Sbjct: 350 TVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVH-ALDAQ 408
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAA 405
++ FM+ + + +L G + +HGD + R VL +FK+G+ ++ +++A
Sbjct: 409 SVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSA 468
Query: 406 RGLDVKDVKYVINYDFPGSLEDYVH 430
RGLDV + V+N + P Y H
Sbjct: 469 RGLDVAECDLVVNLELPTDAVHYAH 493
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 169/336 (50%), Gaps = 16/336 (4%)
Query: 101 FNDVGF-PEYVLEEVKKAGFVEPTPIQSQGWPMALK--GRDLIGIAETGSGKTLAYLLPA 157
F D+ PE + + F +P+ IQ+ PM + + LI A GSGKT ++L
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGM 152
Query: 158 IVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGP--Q 215
+ V+ P L P L + PTRELA Q + K G + I + +G
Sbjct: 153 LSRVD--PTLRE---PQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAA 207
Query: 216 VRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDM-GF---DPQIRKIV 271
R +VI TPG L + L + LV DEAD ML GF +I K +
Sbjct: 208 TRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDI 267
Query: 272 SQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKY 331
++ P+ Q L +SAT+ + V+ + + DP ++ + EDL A ++KQY + P++Q
Sbjct: 268 GRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDL-ALDSVKQYKVVCPKEQNK 326
Query: 332 DKLVK-LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF 390
+++K + ++ D + +IF+ TK ++ + L G+ S+HG+ ++++RD ++ EF
Sbjct: 327 IEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEF 386
Query: 391 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLE 426
K + ++ ATDV ARG D + V V+NY+ P E
Sbjct: 387 KECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYE 422
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 181/410 (44%), Gaps = 75/410 (18%)
Query: 89 VEGRDVPKPVKTFNDVGFPEYVLE-----EVKKAGFVEPTPIQSQGWPMALKGRDLIGIA 143
V G V K + GF +++L+ + +GF P+ +Q + P A+ G D+I A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 144 ETGSGKTLAYLLPAIVHVNAQPILDPGDGPI-VLVLAPTRELAVQIQQECTKFGASS-RI 201
++G GKT ++L + + +P G + LVL TRELA QI E +F
Sbjct: 91 KSGMGKTAVFVLSTLQQI------EPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDT 144
Query: 202 KSTCIYGGVPKGPQVRDLQKGV--EIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRML 259
K + YGGV +DL K IV+ TPGR++ + +L+ V + +LDE D+ML
Sbjct: 145 KVSVFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 203
Query: 260 D-MGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYD----------------- 301
+ + +++I D+Q + +SAT KE+ + +KF+ D
Sbjct: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDFLENETVSVRLFSFGVE 263
Query: 302 ---------PYKVIIGSEDLKANHAIKQYVDIVPEK------------------------ 328
+ V++ +A I EK
Sbjct: 264 NSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLV 323
Query: 329 QKYDKLVKL--------LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQ 380
Q Y KL ++ L D +D ++++IF+ + ++ + L +P++ IH SQ
Sbjct: 324 QHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 383
Query: 381 AERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
ER FK G I+ ATD+ RG+D++ V VINYD P S + Y+H
Sbjct: 384 EERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 433
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 39/364 (10%)
Query: 99 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
KTF ++G E +++ +K+ F P IQ+ + + G+ I ++GSGKTLAYL+P I
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433
Query: 159 VHVNAQPIL-----DPGDGPIVLVLAPTRELAVQIQQECTKFGASSR-IKSTCIYGGVPK 212
+ + + PG P V+VL PT ELA Q+ C S +S + GG +
Sbjct: 434 QRLREEELQGHSKSSPG-CPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQ 492
Query: 213 GPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRML-DMGFDPQIRKIV 271
Q+ +L++GV+++IATPGR ++ L + +LDE D + D F+ ++ ++
Sbjct: 493 RTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLI 552
Query: 272 SQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYV--------- 322
+ Q L+ +AT P E+ + D +V++G + ++A+++++
Sbjct: 553 NSSPVTAQYLFVTATLPLEIYNKLVEVFPD-CEVVMGPRVHRVSNALEEFLVDCSGDDNA 611
Query: 323 DIVPEKQKYDKLVKLLEDIMDG--SRILIFMDTKKGC----------DQITRQLRMDGWP 370
+ PE +K LL+ + + S+ +IF + + C D+ RQL +
Sbjct: 612 EKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHV---- 667
Query: 371 ALSIHGDKSQAERDWVLSEFKSGK----SPIMTATDVAARGLDVKDVKYVINYDFPGSLE 426
L H SQ R + EF S + S + TD A+RG+D V +V+ +DFP
Sbjct: 668 -LPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPS 726
Query: 427 DYVH 430
+YV
Sbjct: 727 EYVR 730
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 159/321 (49%), Gaps = 44/321 (13%)
Query: 108 EYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL 167
E ++E + ++GF TP+Q++ P +D++ A TGSGKTLA+LLP I +
Sbjct: 26 EDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSY 85
Query: 168 DPGDGPIV-LVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVR-DL----QK 221
P ++ ++++PTREL+ QI K + R+ K +V D+ ++
Sbjct: 86 PPKPHQVMGVIISPTRELSAQIH----KVARAVRL-------DFAKCREVEADMNTLEEE 134
Query: 222 GVEIVIATPGRLIDMLES-HHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQT 280
G ++I TPGRL DM++ + R + L+LDEADR+LDMGF Q+ I+S++ R+T
Sbjct: 135 GANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRT 194
Query: 281 LYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLED 340
+SAT + V LA+ L +PY +K D QK +LV LL +
Sbjct: 195 GLFSATQTQAVADLAKAGLRNPY--------------LKCEAD-----QKSSQLVHLLIE 235
Query: 341 IMDGSRILIFMDTKKGCDQ-----ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKS 395
+ ++ FM C I++ + HG Q RD L+ F S
Sbjct: 236 NKNKKLVVFFMTC--ACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASS 293
Query: 396 PIMTATDVAARGLDVKDVKYV 416
++ TDVAARGLD+ + Y+
Sbjct: 294 GVLLCTDVAARGLDIPGIVYI 314
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 182/397 (45%), Gaps = 85/397 (21%)
Query: 110 VLEEVKKAGFVEPTPIQSQGWPMA-LKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILD 168
+++ + + F EPT IQ + +A +G+D+IG AETGSGKTLA+ LP + Q +LD
Sbjct: 201 LMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPIL-----QRLLD 255
Query: 169 -------------------PGDGPI-VLVLAPTRELAVQIQQECTKFGASSRIKSTCIYG 208
DG + L++ PTRELA+Q+ + + +K I G
Sbjct: 256 EREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVG 315
Query: 209 GVPKGPQVRDLQKGVEIVIATPGRLIDML---ESHHTNLRRVTYLVLDEADRMLDMGFDP 265
G+ Q R L++ EIV+ATPGRL +++ E H L +++ VLDEADRM++ G
Sbjct: 316 GMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFR 375
Query: 266 QIRKIVSQI------------------------RPDRQTLYWSATWP------------- 288
+++ I+ + + RQT +SAT
Sbjct: 376 ELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGS 435
Query: 289 -----------KEVEQLA-RKFLYDPYKVIIGSEDLKANHAIKQYVD---IVPEKQKYDK 333
+E L+ R + D +I DL + ++ I E+++ D
Sbjct: 436 SKSKQSSSGEVNSIEVLSERAGMRDNVAII----DLTTTSILAPKIEESFIKCEEKEKDA 491
Query: 334 LVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSG 393
+ + + R ++F + I+ L++ G ++ + Q R + F++
Sbjct: 492 YLYYILSVHGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRAS 551
Query: 394 KSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
++ I+ ATD+ ARG+D+K+V+ +I+Y P S E YVH
Sbjct: 552 ENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVH 588
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 182/400 (45%), Gaps = 51/400 (12%)
Query: 67 SPSVRAMTEAEVDEYRLRREI-TVEGRDVPKPVKTFNDVGFPEYVLEEVKKAGFVEPTPI 125
SPS R + V E E +V VP ++ PE++L +++ GFV PT I
Sbjct: 43 SPSSRIINLQAVAETSSEIESNSVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDI 102
Query: 126 QSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELA 185
Q + P GRD I A+TGSGKTL YLL +N Q +++ PTREL
Sbjct: 103 QREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQ-----RSSVQAVIVVPTRELG 157
Query: 186 VQIQQECTKFGASSRIKST-CIYGGVPKGPQVRDLQKGVE-----IVIATPGRLIDMLES 239
+Q+ + A S I C + G +R + ++ I++AT L MLE
Sbjct: 158 MQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEK 217
Query: 240 HHTNLRRVTYLVLDEADRML----DMGFDPQIRKIVSQIRP--DRQTLYWSATWPKEVEQ 293
H + V LV+DE D + +G +RK+++ RQT++ SA+ P+
Sbjct: 218 HIFRIDSVRVLVVDEVDFLFYSSKQVG---SVRKLLTSFSSCDKRQTVFASASIPQH--- 271
Query: 294 LARKFLYDPYKVIIGSEDLKANHA----------IKQYVDIVPEKQKYDKLVKLLEDIMD 343
+ F++D + D+ H + ++V + + K+ L+ LLE
Sbjct: 272 --KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFV-MCEKTNKHQVLLALLESDAP 328
Query: 344 GSRILIFM-----DTKKGCDQITRQLRMD--------GWPALSIHGDKSQAERDWVLSEF 390
S I IF+ +KK + + L M+ L + GD + R L+E
Sbjct: 329 ESAI-IFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEI 387
Query: 391 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
+ G ++ +TD+AARG+D+ + ++ N+D P ++ DY+H
Sbjct: 388 RQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLH 427
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 175/379 (46%), Gaps = 49/379 (12%)
Query: 99 KTFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K+F ++G ++ + K G +PT IQ P L+G+D++ A+TGSGKTLAYLLP +
Sbjct: 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLL 105
Query: 159 VHV-NAQPILDPGDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCI-YGGVPKGPQV 216
+ +A + P +L P+REL Q+ E + R++ + +
Sbjct: 106 QKLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDM 165
Query: 217 RDLQKGV-EIVIATPGRL-----IDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKI 270
R+ G+ EI+++TP + +LE + ++ LVLDEAD +L G++ +R +
Sbjct: 166 RNALAGLPEILVSTPACIPKCFAAGVLEPTAVS-ESLSILVLDEADLLLSYGYEDNLRSV 224
Query: 271 VSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHA----IKQYVDIVP 326
S I Q L SAT +VE+L + L++P V+ +ED A ++Q+
Sbjct: 225 TSIIPRRCQCLLMSATTSSDVEKLKKLILHNPI-VLTLTEDNDKEEAVPSNVQQFWISCS 283
Query: 327 EKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWV 386
+ K ++ LL+ + +ILIF++T ++ L G + ++G+ Q R +
Sbjct: 284 AQDKLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHI 343
Query: 387 LSEFKSGKSPIMTATDVAA-----------------------------------RGLDVK 411
L +F +G + ATD + RG+D K
Sbjct: 344 LEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFK 403
Query: 412 DVKYVINYDFPGSLEDYVH 430
V VIN+D P S+ Y+H
Sbjct: 404 KVHTVINFDMPQSVTGYIH 422
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 153/357 (42%), Gaps = 68/357 (19%)
Query: 137 RDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQ------- 189
RD+ + TGSGKTL+Y LP + + ++P+ LV+ PTR+LA+Q++
Sbjct: 73 RDICVNSPTGSGKTLSYALPIVQLLASRPV----RCLRALVVLPTRDLALQVKDVFDAIA 128
Query: 190 ------------QECTKFGASSRIKSTCIYGGVPKGPQ--VRDLQKGVEIVIATPGRLID 235
Q S IK+ + G+ P ++L+ V+I++ATPGRL+D
Sbjct: 129 PAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMD 188
Query: 236 MLESHH-TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSAT-------- 286
+ + L + YLV+DE DR+L + + ++ + +L+ S T
Sbjct: 189 HINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFG 248
Query: 287 ------------------WPKEVEQ-LARKFLYDPYKVI-----------IGSEDLKANH 316
+P+ V+ L+ DP K+I G +
Sbjct: 249 SLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPE 308
Query: 317 AIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWP---ALS 373
++ I K LV LL+ +G + +IF + + ++ + L G P A
Sbjct: 309 KLECLRLICETGMKPVYLVALLKS-WEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKE 367
Query: 374 IHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
G +Q+ R L F+ G ++ A+D RG+DVK V VINYD P + ++H
Sbjct: 368 YSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIH 424
>AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:12251845-12254672
FORWARD LENGTH=502
Length = 502
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 131/311 (42%), Gaps = 20/311 (6%)
Query: 170 GDGPIVLVLAPTRELAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVE--IVI 227
G+ P +L L P++ A Q++ C I + ++ G P Q+ L K VE ++
Sbjct: 194 GNSPFLLYLVPSQSKASQVRSVCKALKGIG-IHTVSLHQGAPLDHQISGL-KSVEPEFIV 251
Query: 228 ATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATW 287
ATP RL++++ ++ V+ LV+DE + G+ ++ I I QT+ ++ ++
Sbjct: 252 ATPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSKHQTIVFNNSF 311
Query: 288 PKEVEQLARKFLYDPYKVIIGSEDLKAN-HAIKQYVDIVPEKQKYDKLVKLLEDIMDGSR 346
+ + FL + +E + + I Q V + ++K KL K + + S
Sbjct: 312 SASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEK--KLQKFAKHLDSSSS 369
Query: 347 ILIFMDTK-KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAA 405
LI++ TK + +I L++ G D LSE K + P+ D
Sbjct: 370 KLIYIVTKEESFKKIMAILKLKGISV--------STSSDSKLSEVKKSRKPVAHLIDFEQ 421
Query: 406 RGLDV-KDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARF--AKELITI 462
V +D + V+ DF S+E Y + T +A A L+ +
Sbjct: 422 LDTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHSYITEKDAASYQAGPLVNV 481
Query: 463 LEEAGQRVSPD 473
LE GQ V PD
Sbjct: 482 LENCGQNV-PD 491
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 36/224 (16%)
Query: 100 TFNDVGFPEYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
++ +G + V ++ +GF P+ Q+ P L G+D+I AETGSGKT YL P I
Sbjct: 81 SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIID 140
Query: 160 HVNA----QPILDPGDGP-----IVLVLAPTRELAVQIQQECTKFGASS-----RIKSTC 205
+ + + + P I L+L P L Q+ + R+++ C
Sbjct: 141 QLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVC 200
Query: 206 IYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTN----LRRVTYLVLDEADRMLDM 261
G P + +I+++TP L++ +E LR V Y+V DEAD +L
Sbjct: 201 GSQGWP--------DRLPDIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCG 252
Query: 262 GFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYKV 305
F QI ++++ +R D K+V +LA+ L P ++
Sbjct: 253 SFQNQIIRLINMLRFDE----------KQVSRLAKSNLGRPMEI 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 21/235 (8%)
Query: 266 QIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYDPYK--VIIGSEDLKANH-AIKQ-Y 321
++RKI ++ +Q ++ +AT P ++ A L ++ V + L N +KQ +
Sbjct: 344 RVRKIYTR---SKQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKW 400
Query: 322 VDIVPEKQKYDKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKS 379
V++ + Q D L++ +++ + R ++F +T + + + L H +
Sbjct: 401 VEVTVDSQ-VDALIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHK 459
Query: 380 QAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXX 439
ER +L++F+ + TD AARG+DV +V +VI DF S D++H
Sbjct: 460 LDERANILADFRE-TGGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAG 518
Query: 440 XXXXXXXFFTAANARFAKELITILEEAGQRVSPDLAAMGRGAPPPPSGGFRDRGK 494
+T AN ++L+ + EA + P A R GFR++ K
Sbjct: 519 QYGTVTSLYTEAN----RDLVEAIREAVKMGQPVETAFSR------KRGFRNKVK 563
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 39/235 (16%)
Query: 225 IVIATPGRLIDMLESHHTNLRRVTYLVLDEADRML----DMGFDPQIRKIVSQIRP--DR 278
I++AT L MLE H + V LV+DE D + +G +RK+++ R
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG---SVRKLLTSFSSCDKR 102
Query: 279 QTLYWSATWPKEVEQLARKFLYDPYKVIIGSEDLKANHA----------IKQYVDIVPEK 328
QT++ SA+ P+ + F++D + D+ H + ++V + +
Sbjct: 103 QTVFASASIPQH-----KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFV-MCEKT 156
Query: 329 QKYDKLVKLLEDIMDGSRILIFM-----DTKKGCDQITRQLRMD--------GWPALSIH 375
K+ L+ LLE S I IF+ +KK + + L M+ L +
Sbjct: 157 NKHQVLLALLESDAPESAI-IFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLE 215
Query: 376 GDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
GD + R L+E + G ++ +TD+AARG+D+ + ++ N+D P ++ DY+H
Sbjct: 216 GDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLH 270
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 141/324 (43%), Gaps = 41/324 (12%)
Query: 124 PIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRE 183
P Q + + G D+ + TG GK+L Y LPA++ G I LV++P
Sbjct: 456 PNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALIC-----------GGITLVISP--- 501
Query: 184 LAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQK------GVEIVIATPGRLI--D 235
L IQ + + I + + G+ Q++ Q+ +++ TP ++ D
Sbjct: 502 LVSLIQDQIMNL-LQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSD 560
Query: 236 MLESHHTNLRR---VTYLVLDEADRMLDMGFD----PQIRKIVSQIRPDRQTLYWSATWP 288
L H NL + V+DEA + G D Q I+ Q P+ L +AT
Sbjct: 561 SLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATAT 620
Query: 289 KEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKY----DKLVKLLEDIMDG 344
V++ + L V+ + N + +VP+ +K DK +K E+ D
Sbjct: 621 ASVKEDVVQALGLVNCVVFRQSFNRPN----LWYSVVPKTKKCLEDIDKFIK--ENHFDE 674
Query: 345 SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVA 404
I I+ ++ C++++ +L+ G A HG +R ++ +++ + I+ AT
Sbjct: 675 CGI-IYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVAF 733
Query: 405 ARGLDVKDVKYVINYDFPGSLEDY 428
G++ DV++VI++ P S+E Y
Sbjct: 734 GMGINKPDVRFVIHHSLPKSIEGY 757
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 35/319 (10%)
Query: 126 QSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAP----- 180
Q + + GRD + TG GK++ Y +PA+ PG IVLV++P
Sbjct: 41 QLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAK--------PG---IVLVVSPLIALM 89
Query: 181 -TRELAVQ---IQQECTKFGASSRIKSTCIYGGVPKG-PQVRDLQKGVEIVIATPGRLID 235
+ +A++ I E ++ +K+ I+ + G P VR L E+ IAT G ++
Sbjct: 90 ENQVMALKEKGIAAEYLSSTQATHVKNK-IHEDLDSGKPSVRLLYVTPEL-IATKGFMLK 147
Query: 236 MLESHHTNLRRVTYLVLDEADRMLDMGFD--PQIRKIVSQIR---PDRQTLYWSATWPKE 290
+ + H L + + +DEA + G D P R++ S +R D L +AT +
Sbjct: 148 LRKLHSRGL--LNLIAIDEAHCISSWGHDFRPSYRQL-STLRDSLADVPVLALTATAAPK 204
Query: 291 VEQLARKFLYDPYKVIIGSEDLKANHAIK-QYVDIVPEKQKYDKLVKLLEDIMDGSRILI 349
V++ L +++ S + N + +Y D++ Y L LL+ + I+
Sbjct: 205 VQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKDLL--DNAYTDLGNLLKSCGNICAIIY 262
Query: 350 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLD 409
++ + CD ++ L G + + H + R VL ++ S K I+ AT G+D
Sbjct: 263 CLE-RTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGID 321
Query: 410 VKDVKYVINYDFPGSLEDY 428
KDV+ V +++ P S+E +
Sbjct: 322 KKDVRMVCHFNIPKSMESF 340
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 134/336 (39%), Gaps = 65/336 (19%)
Query: 124 PIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRE 183
P Q + + G D+ + TG GK+L Y LPA++ I LV++P
Sbjct: 472 PNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALLCAG-----------ITLVISP--- 517
Query: 184 LAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQK------GVEIVIATPGRLI--D 235
L IQ + + I + + G+ Q+ LQ+ +++ TP ++ +
Sbjct: 518 LVSLIQDQIMNL-LQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSE 576
Query: 236 MLESHHTNLRRVTYL---VLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 292
L H L + L V+DEA + G D RPD Q L
Sbjct: 577 SLLRHLEILNSRSLLARFVIDEAHCVSQWGHD---------FRPDYQGL----------G 617
Query: 293 QLARKFLYDPYKVIIGSEDLKANHAIKQ---YVDIVPEKQKYD----------KLVKLLE 339
L +KF P + + + Q V+ V +Q ++ K K LE
Sbjct: 618 VLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTNKCLE 677
Query: 340 DIMDGSRI-------LIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKS 392
DI R +I+ ++ C+++T LR+ G A HG +R +V ++
Sbjct: 678 DIDKFIRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSK 737
Query: 393 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDY 428
+ I+ AT G++ DV++VI++ P S+E Y
Sbjct: 738 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGY 773
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 129/316 (40%), Gaps = 41/316 (12%)
Query: 134 LKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQECT 193
+ GRD++ I G GK+L Y LPA++ G LV++P L IQ +
Sbjct: 102 MTGRDVLVIMAAGGGKSLCYQLPAMLR-----------GGTTLVVSPLLSL---IQDQVM 147
Query: 194 KFGAS--SRIKSTCIYGGVPKGPQVRDLQKG---VEIVIATP------GRLIDMLESHHT 242
A S T G + + L+KG ++I+ TP R + LE H
Sbjct: 148 GLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKVSKSKRFMSKLEKCH- 206
Query: 243 NLRRVTYLVLDEADRMLDMG--FDPQIRK--IVSQIRPDRQTLYWSATWPKEVEQLARKF 298
N R++ + +DEA G F P + I+ P + +AT ++V+ +
Sbjct: 207 NAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVALTATATQKVQNDLIEM 266
Query: 299 LYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVK------LLEDIMDGSRILIFMD 352
L+ P V S + N V EK KLV + E + +++
Sbjct: 267 LHIPKCVKFVSSVNRPNLFYS-----VREKSAVGKLVVDEIAEFIRESYSNNESGIVYCF 321
Query: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 412
++K C+QI LR G A H D R+ V + K ++ T G++ D
Sbjct: 322 SRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMGINKPD 381
Query: 413 VKYVINYDFPGSLEDY 428
V++VI++ S+E Y
Sbjct: 382 VRFVIHHSLSKSMETY 397
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 141/326 (43%), Gaps = 48/326 (14%)
Query: 126 QSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELA 185
Q Q M L G + + TG+GK+L Y +PA++ PG I LV++P L
Sbjct: 274 QLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAMIL--------PG---ITLVVSPLVSLM 322
Query: 186 V-QIQQECTKFGASSRIKSTCIYGGVPKGPQ--------VRDLQKGV-EIVIATPGRL-- 233
+ Q++ + I GG+ Q +R L++G+ +++ +P RL
Sbjct: 323 IDQLKH-----------LPSIIKGGLLSSSQRPEEATETLRKLKEGIIKVLFVSPERLLN 371
Query: 234 IDMLESHHTNLRRVTYLVLDEADRMLD--MGFDPQIRKI-----VSQIRPDRQTLYWSAT 286
++ L +L V+ +V+DEA + + F P ++ S+++ + L +AT
Sbjct: 372 VEFLSMFRMSLS-VSLVVVDEAHCVSEWSHNFRPSYMRLKASMLFSELKAE-CILAMTAT 429
Query: 287 WPKEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLED--IMDG 344
Q L P +I L+ N + V + + D L+ L+E +
Sbjct: 430 ATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELS--VSLSGANRMKDLLI-LMESPPYKEI 486
Query: 345 SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVA 404
I+++ + D I++ LR + A H +R + F S K ++ AT
Sbjct: 487 RSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVATVAF 546
Query: 405 ARGLDVKDVKYVINYDFPGSLEDYVH 430
GLD DV VI++ PGS+E+YV
Sbjct: 547 GMGLDKGDVGAVIHFSVPGSMEEYVQ 572
>AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 |
chr3:1698180-1701228 FORWARD LENGTH=606
Length = 606
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 134/321 (41%), Gaps = 33/321 (10%)
Query: 124 PIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRE 183
P+Q Q +++ +D + TG GK+L Y LPA + ++ P +L L +
Sbjct: 209 PLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATLKAGVTIVISP-----LLSLIQDQI 263
Query: 184 LAVQIQQECTKFGASSRIKSTCIYGGVPKGPQVRDLQK------GVEIVIATPGRLI--- 234
+A+ + KFG I +T + LQ+ +++ TP ++
Sbjct: 264 VALNL-----KFG----IPATFLNSQQTSSQAAAVLQELRRDNPSCKLLYVTPEKIAGSS 314
Query: 235 DMLESHHTNLRR--VTYLVLDEADRMLDMG--FDPQIRKI--VSQIRPDRQTLYWSATWP 288
LE+ R+ + V+DEA + G F P R++ + Q P + +AT
Sbjct: 315 SFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVPVMALTATAT 374
Query: 289 KEVEQLARKFLYDPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRIL 348
+ V Q K L P ++ + N +Y IV K+ +L +LL D +
Sbjct: 375 ESVCQDVLKSLRIPRAPVLKMSFDRINL---KYEVIVKTKEPLKQLQELLRDRFKDQSGI 431
Query: 349 IFMDTKKGCDQITRQLRMDG-WPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARG 407
++ +K C + + L + H +R V ++++G+ I+ AT G
Sbjct: 432 VYCLSKSECVDVAKFLNEKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIAFGMG 491
Query: 408 LDVKDVKYVINYDFPGSLEDY 428
+D DV++VI+ ++E Y
Sbjct: 492 IDKADVRFVIHNTLSKAVESY 512