Miyakogusa Predicted Gene

Lj0g3v0060599.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0060599.1 Non Chatacterized Hit- tr|H6A2P4|H6A2P4_WHEAT
Putative uncharacterized protein OS=Triticum aestivum
,42.66,8e-16,seg,NULL;
coiled-coil,NULL,NODE_65586_length_979_cov_19.603678.path1.1
         (280 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17665.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   251   6e-67

>AT1G17665.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 15 plant structures; EXPRESSED
           DURING: 11 growth stages; Has 149 Blast hits to 146
           proteins in 39 species: Archae - 0; Bacteria - 4;
           Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other
           Eukaryotes - 89 (source: NCBI BLink). |
           chr1:6072432-6074484 REVERSE LENGTH=338
          Length = 338

 Score =  251 bits (640), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 128/185 (69%), Positives = 152/185 (82%), Gaps = 1/185 (0%)

Query: 95  NESSDPGSDSGVRFETACLYPFTSSSSAMQRKIKQQYDELVKSNDSKKLTLAQVVQFANS 154
           N  +D  S S  + E  CLYPFTS+SSA QRKIKQQYD+LVK N++K LTLAQV +FAN 
Sbjct: 152 NPRTDSISISENKPEFVCLYPFTSTSSATQRKIKQQYDQLVKCNNAKGLTLAQVGEFANC 211

Query: 155 LVDARDELQHKADAIQRKFIITKALLCKANRSSFDRLHQQIYKLELEQKRLEEDAFVYNS 214
           L++A++ELQHK++ I+RKF ITKALL KA+RSSFDRL QQIYKLE+EQKR+EEDA VYN 
Sbjct: 212 LIEAKNELQHKSEVIKRKFSITKALLFKADRSSFDRLRQQIYKLEMEQKRVEEDALVYNW 271

Query: 215 LQQQLKLSPAYQKMLELGACME-KEKSCGHGDNRDDEFAEISFEELLAQEKKDSFWQKNG 273
           LQQQLKLSPAY+K+LE+ A ME K+KS    DN DDEF++ISFEELL QEKKDSFW KNG
Sbjct: 272 LQQQLKLSPAYKKVLEISASMELKDKSSTELDNPDDEFSDISFEELLEQEKKDSFWHKNG 331

Query: 274 KSRLC 278
           + R C
Sbjct: 332 RLRTC 336