Miyakogusa Predicted Gene
- Lj0g3v0060589.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0060589.1 Non Chatacterized Hit- tr|I1M5C7|I1M5C7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20167 PE,82.82,0,no
description,WD40/YVTN repeat-like-containing domain; coiled-coil,NULL;
WD_REPEATS_2,WD40 repeat;
,NODE_58275_length_1453_cov_76.980042.path1.1
(464 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G19520.1 | Symbols: FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4 | Tr... 694 0.0
AT4G29730.1 | Symbols: NFC5, MSI5 | nucleosome/chromatin assembl... 607 e-174
AT2G16780.1 | Symbols: MSI2, MSI02, NFC02, NFC2 | Transducin fam... 206 3e-53
AT5G58230.1 | Symbols: MSI1, MEE70, ATMSI1 | Transducin/WD40 rep... 195 6e-50
AT4G35050.1 | Symbols: MSI3, NFC3 | Transducin family protein / ... 195 7e-50
AT2G19540.1 | Symbols: | Transducin family protein / WD-40 repe... 105 5e-23
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 67 2e-11
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 61 1e-09
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 61 1e-09
AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | Tran... 61 1e-09
AT1G29260.1 | Symbols: PEX7, ATPEX7 | peroxin 7 | chr1:10224923-... 61 2e-09
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 60 3e-09
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 59 8e-09
AT4G32990.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 58 1e-08
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 56 6e-08
AT1G71840.1 | Symbols: | transducin family protein / WD-40 repe... 55 1e-07
AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 54 2e-07
AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 54 2e-07
AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 54 2e-07
AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 54 3e-07
AT1G20540.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 53 5e-07
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r... 52 6e-07
AT3G63460.2 | Symbols: | transducin family protein / WD-40 repe... 51 1e-06
AT3G63460.1 | Symbols: | transducin family protein / WD-40 repe... 51 1e-06
AT3G63460.3 | Symbols: | transducin family protein / WD-40 repe... 51 2e-06
AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfam... 50 2e-06
AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfam... 50 3e-06
AT5G26900.1 | Symbols: | Transducin family protein / WD-40 repe... 50 5e-06
AT3G15980.5 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 49 5e-06
AT3G15980.4 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 49 5e-06
AT3G15980.1 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 49 6e-06
AT3G15980.3 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 49 6e-06
AT3G15980.2 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 49 6e-06
AT5G27945.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 6e-06
AT2G32700.2 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 49 7e-06
AT2G32700.1 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 49 7e-06
AT2G32700.4 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 49 7e-06
AT2G32700.5 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 49 7e-06
AT2G32700.3 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 49 7e-06
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 49 7e-06
AT2G32700.7 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 49 7e-06
AT2G32700.6 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387... 49 8e-06
AT1G79990.3 | Symbols: | structural molecules | chr1:30085910-3... 49 1e-05
AT1G52360.1 | Symbols: | Coatomer, beta' subunit | chr1:1949928... 49 1e-05
>AT2G19520.1 | Symbols: FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4 |
Transducin family protein / WD-40 repeat family protein
| chr2:8456006-8459235 FORWARD LENGTH=507
Length = 507
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/446 (73%), Positives = 371/446 (83%), Gaps = 8/446 (1%)
Query: 15 AVEQRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEHATYKNRHRLYLSEQTDGTVP 74
+V+++Y+QWK LVP+LYDWLANHNLVWPSLSCRWGPQLE ATYKNR RLYLSEQTDG+VP
Sbjct: 63 SVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVP 122
Query: 75 NTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTILHPGEVNRIRELPQDGKIVAT 134
NTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKK+KTI+HPGEVNRIRELPQ+ KIVAT
Sbjct: 123 NTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVAT 182
Query: 135 HTDSPNVLIWDVESQPNRQAVLGAPTSRPDLVLTGHKDDAEFALDMCPTEPFVLSGGKDK 194
HTDSP+VLIWDVE+QPNR AVLGA SRPDL+LTGH+D+AEFAL MCPTEPFVLSGGKDK
Sbjct: 183 HTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDK 242
Query: 195 CVVLWSIHDHISTLGVEAGSTTPKQGSGSKVTGNSEKTTESPSVAPRGIYKGHTDTVEDV 254
VVLWSI DHI+T+G ++ S+ GS K TG ESP+V PRG+Y GH DTVEDV
Sbjct: 243 SVVLWSIQDHITTIGTDSKSS----GSIIKQTGEGTDKNESPTVGPRGVYHGHEDTVEDV 298
Query: 255 QFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTGSA 314
F P+SA EFCSVGDDS LILWDAR G+ PV KVEKAHD DLHCVDWNPHD N ILTGSA
Sbjct: 299 AFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSA 358
Query: 315 DNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIWDYEK 374
DNTV +FDRRK G+GSP++KF+GH AAVLCVQW PDKSSVFGS+AEDG+LNIWDY++
Sbjct: 359 DNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDR 418
Query: 375 VDTTGSAADPKGSDNPPGLFFRHAGHRDKIVDFHWNASEPWTIXXXXXXXXXXXXXXXLQ 434
V S + + +P GLFF+HAGHRDK+VDFHWNAS+PWTI LQ
Sbjct: 419 V----SKKSDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQ 474
Query: 435 IWRMIDLIYRPEEEVLDELDKLQSQI 460
IWRM DLIYRPEEEV+ EL+K +S +
Sbjct: 475 IWRMSDLIYRPEEEVVAELEKFKSHV 500
>AT4G29730.1 | Symbols: NFC5, MSI5 | nucleosome/chromatin assembly
factor group C5 | chr4:14559255-14562522 REVERSE
LENGTH=487
Length = 487
Score = 607 bits (1565), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/448 (65%), Positives = 339/448 (75%), Gaps = 18/448 (4%)
Query: 13 RNAVEQRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEHATYKNRHRLYLSEQTDGT 72
+ V+ Y+QWK+L+P+LYD NH LVWPSLSCRWGPQLE A K + RLYLSEQT+G+
Sbjct: 51 KATVDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSKTQ-RLYLSEQTNGS 109
Query: 73 VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTILHPGEVNRIRELPQDGKIV 132
VPNTLVIANCE V Q NE+A SPFVKK+KTI+HPGEVNRIRELPQ+ KIV
Sbjct: 110 VPNTLVIANCETVN---------RQLNEKAHSPFVKKYKTIIHPGEVNRIRELPQNSKIV 160
Query: 133 ATHTDSPNVLIWDVESQPNRQAVLGAPTSRPDLVLTGHKDDAEFALDMCPTEPFVLSGGK 192
ATHTDSP++LIW+ E+QP+R AVLGAP SRPDL+L GH+DDAEFAL MCPTEPFVLSGGK
Sbjct: 161 ATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCPTEPFVLSGGK 220
Query: 193 DKCVVLWSIHDHISTLGVEAGSTTPKQGSGSKVTGNSEKTTESPSVAPRGIYKGHTDTVE 252
DK V+LW+I DHI+ AGS + GS K TG T PSV PRGIY GH DTVE
Sbjct: 221 DKSVILWNIQDHITM----AGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNGHKDTVE 276
Query: 253 DVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTG 312
DV FCPSSA EFCSVGDDS L+LWDAR G++P KVEKAHD DLHCVDWNPHD N ILTG
Sbjct: 277 DVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTG 336
Query: 313 SADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIWDY 372
SADNTV +FDRR + G+GSPV+KF+GH AAVLCVQW PDKSSVFGS+AEDG+LNIWD
Sbjct: 337 SADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDC 396
Query: 373 EKVDTTGSAADPKGSDNPPGLFFRHAGHRDKIVDFHWNASEPWTIXXXXXXXXXXXXXXX 432
++V A + P GLFF+HAGHRDK+VDFHW+ PWTI
Sbjct: 397 DRVGKKSERA----TKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNCESIGGGGT 452
Query: 433 LQIWRMIDLIYRPEEEVLDELDKLQSQI 460
LQIWRM DLIYRPE+EVL EL+K +S +
Sbjct: 453 LQIWRMSDLIYRPEDEVLTELEKFKSHV 480
>AT2G16780.1 | Symbols: MSI2, MSI02, NFC02, NFC2 | Transducin family
protein / WD-40 repeat family protein |
chr2:7281615-7283583 REVERSE LENGTH=415
Length = 415
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 209/449 (46%), Gaps = 53/449 (11%)
Query: 16 VEQRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEHA----TYKNRHRLYLSEQTDG 71
VE+ ++ WK P LYD L +H L WPSL+ W P + +Y H+L L T G
Sbjct: 14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSG 73
Query: 72 TVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTILHPGEVNRIRELPQDGKI 131
+ + L++A+ VV P A I N++ P V+ + I GEVNR R +PQ +
Sbjct: 74 SAQDFLMVAD--VVTPTPNAEPGIGGANQDPFIPKVEIRQRIRVDGEVNRARCMPQKPTL 131
Query: 132 VATHTDSPNVLIWDVESQPNRQAVLGAPTSRPDLVLTGHKDDAEFALDMCP-TEPFVLSG 190
V T V ++D + PDL L GH D + L P E ++LSG
Sbjct: 132 VGAKTSGCEVFLFDYAKHAAKSQT---SECDPDLRLVGH-DKEGYGLSWSPFKEGYLLSG 187
Query: 191 GKDKCVVLWSIHDHISTLGVEAGSTTPKQGSGSKVTGNSEKTTESPSVAPRGIYKGHTDT 250
+D+ + LW + S TP+ KV + +Y+GH
Sbjct: 188 SQDQKICLWDV------------SATPQ----DKV------------LNAMFVYEGHESA 219
Query: 251 VEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFIL 310
+ DV + + F S G+D RL++WD R + + K H+ +++ + +NP + +
Sbjct: 220 IADVSWHMKNENLFGSAGEDGRLVIWDTR--TNQMQHQVKVHEREVNYLSFNPFNEWVLA 277
Query: 311 TGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIW 370
T S+D+TV +FD RK N +P+H H+ V V+W P+ +V S+ ED L +W
Sbjct: 278 TASSDSTVALFDLRKLN-----APLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVW 332
Query: 371 DYEKVDTTGSAADPKGSDNPPGLFFRHAGHRDKIVDFHWNASEPWTIXXXXXXXXXXXXX 430
D +V + D PP L F H GH+ KI DF WN +EPW I
Sbjct: 333 DLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVI-------ASVAED 385
Query: 431 XXLQIWRMIDLIYRPEEEVLDELDKLQSQ 459
LQ+W+M + IYR EE+ D + + Q
Sbjct: 386 NSLQVWQMAESIYRDEEDAEDIKEDITQQ 414
>AT5G58230.1 | Symbols: MSI1, MEE70, ATMSI1 | Transducin/WD40
repeat-like superfamily protein | chr5:23556112-23557994
FORWARD LENGTH=424
Length = 424
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 141/448 (31%), Positives = 202/448 (45%), Gaps = 63/448 (14%)
Query: 16 VEQRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEHATYKNR--HRLYLSEQTDGTV 73
+ + Y WK P LYD + H L WPSL+ W P E + K+ ++ L T +
Sbjct: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSESE 76
Query: 74 PNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKFKTILHPGEVNRIRE 124
PN L++A ++ P Q++++ RS F V+ + I H GEVNR R
Sbjct: 77 PNYLMLAQVQL--PLDDTESEARQYDDD-RSEFGGFGCATGKVQIIQQINHDGEVNRARY 133
Query: 125 LPQDGKIVATHTDSPNVLIWDVESQPNRQAVLGAPTSRPDLVLTGHKDDAEFALDMCP-T 183
+PQ+ I+AT T + V ++D P++ + GA PDL L GH + + L
Sbjct: 134 MPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGA--CNPDLKLRGHSSEG-YGLSWSKFK 190
Query: 184 EPFVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQGSGSKVTGNSEKTTESPSVAPRGI 243
+ +LSG D + LW I + TPK + S+ + I
Sbjct: 191 QGHLLSGSDDAQICLWDI------------NATPK----------------NKSLDAQQI 222
Query: 244 YKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARV--GSTPVAKVEKAHDGDLHCVDW 301
+K H VEDV + F SVGDD L++WD R S PV V AH +++C+ +
Sbjct: 223 FKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSV-VAHSMEVNCLAF 281
Query: 302 NPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSA 361
NP + + TGS D TV +FD RK L + +H F H V V W P ++ S
Sbjct: 282 NPFNEWVVATGSTDKTVKLFDLRK-----LSTALHTFDSHKEEVFQVGWNPKNETILASC 336
Query: 362 AEDGILNIWDYEKVDTTGSAADPKGSDNPPGLFFRHAGHRDKIVDFHWNASEPWTIXXXX 421
L +WD ++D + D D PP L F H GH KI DF WN E W I
Sbjct: 337 CLGRRLMVWDLSRIDEEQTVED--AEDGPPELLFIHGGHTSKISDFSWNPCEDWVI---- 390
Query: 422 XXXXXXXXXXXLQIWRMIDLIYRPEEEV 449
LQIW+M + IY E++
Sbjct: 391 ---SSVAEDNILQIWQMAENIYHDEDDA 415
>AT4G35050.1 | Symbols: MSI3, NFC3 | Transducin family protein /
WD-40 repeat family protein | chr4:16682752-16684751
REVERSE LENGTH=424
Length = 424
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 197/438 (44%), Gaps = 57/438 (13%)
Query: 14 NAVEQRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQ----LEHATYKNRHRLYLSEQT 69
+ VE+ ++ WK P LYD + +H L WPSL+ W P Y H+L L T
Sbjct: 13 DQVEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHT 72
Query: 70 DGTVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTILHPGEVNRIRELPQDG 129
G + L++A+ VV P A + ++E P V+ + I GEVNR R +PQ
Sbjct: 73 SGGAQDFLMVAD--VVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARCMPQKP 130
Query: 130 KIVATHTDSPNVLIWDVESQPNRQAVLGAPTSR---PDLVLTGHKDDAEFALDMCPTEPF 186
+V T V ++D + G P + PDL L GH+ + E +
Sbjct: 131 TLVGAKTSGSEVFLFDYAR------LSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGY 184
Query: 187 VLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQGSGSKVTGNSEKTTESPSVAPRGIYKG 246
+LSG +D+ + LW + T + P +Y+G
Sbjct: 185 LLSGSQDQRICLWDV----------------------------SATATDKVLNPMHVYEG 216
Query: 247 HTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDI 306
H +EDV + + F S GDD +L++WD R + + K H+ +++ + +NP +
Sbjct: 217 HQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLR--TNQMQHQVKVHEREINYLSFNPFNE 274
Query: 307 NFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGI 366
+ T S+D+TV +FD RK L +P+H H+ V V+W P+ +V S+ ED
Sbjct: 275 WVLATASSDSTVALFDLRK-----LTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRR 329
Query: 367 LNIWDYEKVDTTGSAADPKGSDNPPGLFFRHAGHRDKIVDFHWNASEPWTIXXXXXXXXX 426
L +WD +V + D PP L F H GH+ KI DF WN EPW I
Sbjct: 330 LMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVI-------SS 382
Query: 427 XXXXXXLQIWRMIDLIYR 444
LQ+W+M + IYR
Sbjct: 383 VAEDNSLQVWQMAESIYR 400
>AT2G19540.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr2:8461804-8464347 FORWARD LENGTH=469
Length = 469
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 139/330 (42%), Gaps = 59/330 (17%)
Query: 109 KFKTILHPGEVNRIRELPQDGKIVATHTDSPNVLIWDVESQPNRQA---VLGAPTSRPDL 165
+ + + H G VNRIR +PQ+ I + DS +V +WD+ S N A G + P L
Sbjct: 152 QVRRVAHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESETEGKDGTSPVL 211
Query: 166 V------LTGHKDDAEFALDMCP-TEPFVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPK 218
+GHKD+ +A+D P T +LSG + LW
Sbjct: 212 NQAPLVNFSGHKDEG-YAIDWSPATAGRLLSGDCKSMIHLW------------------- 251
Query: 219 QGSGSKVTGNSEKTTESPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDA 278
E + S +V P + GHT +VED+Q+ P+ F S D + +WD
Sbjct: 252 -----------EPASGSWAVDPIP-FAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI 299
Query: 279 RVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKF 338
R+G +P KAH+ D++ + WN + +GS D T + D R +G + V F
Sbjct: 300 RLGKSPALSF-KAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLI--KGGDAVVAHF 356
Query: 339 KGHDAAVLCVQWCPDKSSVFGSAAEDGILNIWDYE-----------KVDTTGSAADPKGS 387
+ H + ++W ++S + D L IWD T P+
Sbjct: 357 EYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQ-- 414
Query: 388 DNPPGLFFRHAGHRDKIVDFHWNASEPWTI 417
D PP L F H G +D + + HW+ P I
Sbjct: 415 DLPPQLLFVHQGQKD-LKELHWHNQIPGMI 443
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 99/260 (38%), Gaps = 60/260 (23%)
Query: 125 LPQDGKIVATHTDSPNVLIWDV-------------ESQPNRQAVLGAPTSRPDLVLTGHK 171
+ DG +VA ++ +WD+ E+ + Q++ G R +L GH
Sbjct: 360 ISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSI-GPNGRRSYTLLLGHS 418
Query: 172 DDAEFALDMCPTEPFVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQGSGSKVTGNSEK 231
++ P FVLS D + LWS +K+ N
Sbjct: 419 GPV-YSATFSPPGDFVLSSSADTTIRLWS----------------------TKLNANLV- 454
Query: 232 TTESPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKA 291
YKGH V D QF P F S D +W + ++
Sbjct: 455 -----------CYKGHNYPVWDAQFSPF-GHYFASCSHDRTARIWS--MDRIQPLRIMAG 500
Query: 292 HDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWC 351
H D+ CV W+P + N+I TGS+D TV ++D + G V F GH + VL +
Sbjct: 501 HLSDVDCVQWHP-NCNYIATGSSDKTVRLWDVQT------GECVRIFIGHRSMVLSLAMS 553
Query: 352 PDKSSVFGSAAEDGILNIWD 371
PD S EDG + +WD
Sbjct: 554 PD-GRYMASGDEDGTIMMWD 572
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 97/245 (39%), Gaps = 59/245 (24%)
Query: 131 IVATHTDSPNVLIWDVESQPNRQAVLGAPTSRPDLVLTGHKDDAEFALDMCPTEPFVLSG 190
+VA S + +WD+E ++ LTGH+ + ++D P F SG
Sbjct: 73 LVAAGAASGTIKLWDLEE------------AKIVRTLTGHRSNC-ISVDFHPFGEFFASG 119
Query: 191 GKDKCVVLWSIHDHISTLGVEAGSTTPKQGSGSKVTGNSEKTTESPSVAPRGIYKGHTDT 250
D + +W I K+G YKGHT
Sbjct: 120 SLDTNLKIWDIR---------------KKGCIH-------------------TYKGHTRG 145
Query: 251 VEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFIL 310
V ++F P S G+D+ + +WD G + K+H+G + +D++PH+ +
Sbjct: 146 VNVLRFTPD-GRWVVSGGEDNIVKVWDLTAGK--LLTEFKSHEGQIQSLDFHPHEF-LLA 201
Query: 311 TGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIW 370
TGSAD TV +D F G G P A V C+ + PD +V E L I+
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGP------ETAGVRCLSFNPDGKTVLCGLQES--LKIF 253
Query: 371 DYEKV 375
+E +
Sbjct: 254 SWEPI 258
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 97/245 (39%), Gaps = 59/245 (24%)
Query: 131 IVATHTDSPNVLIWDVESQPNRQAVLGAPTSRPDLVLTGHKDDAEFALDMCPTEPFVLSG 190
+VA S + +WD+E ++ LTGH+ + ++D P F SG
Sbjct: 73 LVAAGAASGTIKLWDLEE------------AKIVRTLTGHRSNC-ISVDFHPFGEFFASG 119
Query: 191 GKDKCVVLWSIHDHISTLGVEAGSTTPKQGSGSKVTGNSEKTTESPSVAPRGIYKGHTDT 250
D + +W I K+G YKGHT
Sbjct: 120 SLDTNLKIWDIR---------------KKGCIH-------------------TYKGHTRG 145
Query: 251 VEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFIL 310
V ++F P S G+D+ + +WD G + K+H+G + +D++PH+ +
Sbjct: 146 VNVLRFTPD-GRWVVSGGEDNIVKVWDLTAGK--LLTEFKSHEGQIQSLDFHPHEF-LLA 201
Query: 311 TGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIW 370
TGSAD TV +D F G G P A V C+ + PD +V E L I+
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGP------ETAGVRCLSFNPDGKTVLCGLQES--LKIF 253
Query: 371 DYEKV 375
+E +
Sbjct: 254 SWEPI 258
>AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 |
Transducin/WD40 repeat-like superfamily protein |
chr2:13978000-13983282 FORWARD LENGTH=675
Length = 675
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 244 YKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNP 303
Y+ H V F + S DD ++ +W R ++ + KA ++ CV +NP
Sbjct: 459 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKA---NICCVKYNP 515
Query: 304 HDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAE 363
N+I GSAD+ +H +D R + P+H F GH AV V++ + SA+
Sbjct: 516 GSSNYIAVGSADHHIHYYDL-----RNISQPLHVFSGHKKAVSYVKFLSNNE--LASAST 568
Query: 364 DGILNIWD 371
D L +WD
Sbjct: 569 DSTLRLWD 576
>AT1G29260.1 | Symbols: PEX7, ATPEX7 | peroxin 7 |
chr1:10224923-10225876 FORWARD LENGTH=317
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 244 YKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARV-GSTPVAKVEKAHDGDLHCVDWN 302
+K H V + P F S D L +WD R GST + AHD ++ DWN
Sbjct: 145 FKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGST---MIIPAHDFEILSCDWN 201
Query: 303 PHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAA 362
+D + T S D TV ++D R + P+ GH AV V++ P + S+ S +
Sbjct: 202 KYDDCILATSSVDKTVKVWDVRSYR-----VPLAVLNGHGYAVRKVKFSPHRRSLIASCS 256
Query: 363 EDGILNIWDY 372
D + +WDY
Sbjct: 257 YDMSVCLWDY 266
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 70/167 (41%), Gaps = 14/167 (8%)
Query: 232 TTESPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKA 291
T P P + GH + + DV F S A S DD L LWD GS + K
Sbjct: 55 TINDPIAEPVQEFTGHENGISDVAF-SSDARFIVSASDDKTLKLWDVETGS--LIKTLIG 111
Query: 292 HDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWC 351
H CV++NP N I++GS D TV ++D G + H V V +
Sbjct: 112 HTNYAFCVNFNPQS-NMIVSGSFDETVRIWDVTT------GKCLKVLPAHSDPVTAVDFN 164
Query: 352 PDKSSVFGSAAEDGILNIWDYEKVDTTGSAADPKGSDNPPGLFFRHA 398
D S + S++ DG+ IWD + D +NPP F R +
Sbjct: 165 RDGSLIV-SSSYDGLCRIWDSGTGHCVKTLID---DENPPVSFVRFS 207
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 244 YKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNP 303
Y+GH+ + D+ + S + CS DD L +WDAR KV + H + CV++NP
Sbjct: 81 YEGHSSGISDLAW-SSDSHYTCSASDDCTLRIWDAR-SPYECLKVLRGHTNFVFCVNFNP 138
Query: 304 HDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAE 363
N I++GS D T+ +++ + G V K H + V + D S + SA+
Sbjct: 139 PS-NLIVSGSFDETIRIWEVKT------GKCVRMIKAHSMPISSVHFNRDGSLIV-SASH 190
Query: 364 DGILNIWDYEKVDTTGSAADPKGSDNPPGLFF 395
DG IWD ++ G+ D P + F
Sbjct: 191 DGSCKIWDAKE----GTCLKTLIDDKSPAVSF 218
>AT4G32990.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:15920230-15922658 FORWARD LENGTH=328
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 52/270 (19%)
Query: 115 HPGEVNRIRELPQDGKIVATHTDSPNVLIWDVESQPNRQAVLGAPTSRPDLVLTGHKDDA 174
H EV + G ++AT +V IW+++ + + + A VLTGH +D
Sbjct: 91 HESEVKSV-SWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIA-------VLTGHSEDV 142
Query: 175 EFALDMCPTEPFVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQGSGSKVTGNSEKTTE 234
+ L PT + S D + +W D + G + V SE
Sbjct: 143 KMVL-WHPTMDVLFSCSYDNTIKIWCSED--------------EDGDYNCVQTLSE---- 183
Query: 235 SPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGS----------TP 284
+ GH+ TV + F ++ + + DD + +W + T
Sbjct: 184 --------LNNGHSSTVWSISF-NAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTH 234
Query: 285 VAKVEKAHDGDLHCVDWNPHDINFILTGSADNTVHMF---DRRKFNNRGLGSPVHKFKGH 341
V + HD ++ V W+ + I +G+ D+T+ +F D + V K K H
Sbjct: 235 VCTLSGFHDRTIYSVHWSRDGV--IASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAH 292
Query: 342 DAAVLCVQWCPDKSS-VFGSAAEDGILNIW 370
+ V VQW PDK S + SA++D ++ IW
Sbjct: 293 EMDVNSVQWAPDKESRLLASASDDKMVKIW 322
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 244 YKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNP 303
YKGHT V ++F P S G+D+ + +WD G + K+H+G + +D++P
Sbjct: 139 YKGHTRGVNVLRFTPD-GRWIVSGGEDNVVKVWDLTAGK--LLHEFKSHEGKIQSLDFHP 195
Query: 304 HDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAE 363
H+ + TGSAD TV +D F G G V C+ + PD SV E
Sbjct: 196 HEF-LLATGSADKTVKFWDLETFELIGSGGT------ETTGVRCLTFNPDGKSVLCGLQE 248
Query: 364 DGILNIWDYEKV 375
L I+ +E +
Sbjct: 249 S--LKIFSWEPI 258
>AT1G71840.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:27022424-27024380 FORWARD
LENGTH=407
Length = 407
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 93/224 (41%), Gaps = 56/224 (25%)
Query: 128 DGKIVATHTDSPNVLIWDVESQPNRQAVLGAPTSRPDLVLTGHKDDAEFALDMCPTEPFV 187
DGK++ T +D ++++W+ ++ + V G P L LD+
Sbjct: 208 DGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLT----------CLDINSNSSLA 257
Query: 188 LSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQGSGSKVTGNSEKTTESPSVAPRGIYKGH 247
+SG KD V HI + VTG + S H
Sbjct: 258 ISGSKDGSV-------HIVNI----------------VTGKVVSSLNS-----------H 283
Query: 248 TDTVEDVQFCPSSA--PEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHD 305
TD+VE V+F PSSA P + G D +LI+WD + STP E H+ + + W
Sbjct: 284 TDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQ-HSTPRFICE--HEEGVTSLTWIGTS 340
Query: 306 INFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQ 349
++ TG A+ TV ++D LG+ VH + GH AV +
Sbjct: 341 -KYLATGCANGTVSIWDSL------LGNCVHTYHGHQDAVQAIS 377
>AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477586-16479266 REVERSE LENGTH=347
Length = 347
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 243 IYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVG---STPVAKVEKAHDGDLHCV 299
+ GH V Q+ P+ + D ILWD G S + + H D+ V
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 210
Query: 300 DWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFG 359
+ + N+ ++GS D+T ++D R + V F GH+ V V++ PD FG
Sbjct: 211 SISGSNPNWFISGSCDSTARLWDTRAASR-----AVRTFHGHEGDVNTVKFFPDGYR-FG 264
Query: 360 SAAEDGILNIWD 371
+ ++DG ++D
Sbjct: 265 TGSDDGTCRLYD 276
>AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16479266 REVERSE LENGTH=377
Length = 377
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 243 IYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVG---STPVAKVEKAHDGDLHCV 299
+ GH V Q+ P+ + D ILWD G S + + H D+ V
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 210
Query: 300 DWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFG 359
+ + N+ ++GS D+T ++D R + V F GH+ V V++ PD FG
Sbjct: 211 SISGSNPNWFISGSCDSTARLWDTRAASR-----AVRTFHGHEGDVNTVKFFPDGYR-FG 264
Query: 360 SAAEDGILNIWD 371
+ ++DG ++D
Sbjct: 265 TGSDDGTCRLYD 276
>AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16479266 REVERSE LENGTH=372
Length = 372
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 243 IYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVG---STPVAKVEKAHDGDLHCV 299
+ GH V Q+ P+ + D ILWD G S + + H D+ V
Sbjct: 146 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 205
Query: 300 DWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFG 359
+ + N+ ++GS D+T ++D R + V F GH+ V V++ PD FG
Sbjct: 206 SISGSNPNWFISGSCDSTARLWDTRAASR-----AVRTFHGHEGDVNTVKFFPDGYR-FG 259
Query: 360 SAAEDGILNIWD 371
+ ++DG ++D
Sbjct: 260 TGSDDGTCRLYD 271
>AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16478769 REVERSE LENGTH=315
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 243 IYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVG---STPVAKVEKAHDGDLHCV 299
+ GH V Q+ P+ + D ILWD G S + + H D+ V
Sbjct: 89 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 148
Query: 300 DWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFG 359
+ + N+ ++GS D+T ++D R + V F GH+ V V++ PD FG
Sbjct: 149 SISGSNPNWFISGSCDSTARLWDTRAASR-----AVRTFHGHEGDVNTVKFFPDGYR-FG 202
Query: 360 SAAEDGILNIWD 371
+ ++DG ++D
Sbjct: 203 TGSDDGTCRLYD 214
>AT1G20540.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:7112652-7115191 FORWARD LENGTH=351
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 270 DSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNR 329
+S + WD R V +E AH + VD+NP + ++T ++ +H++D RK
Sbjct: 189 ESSVQFWDLRT-MKKVNSIEHAH---VRGVDYNPKREHILVTAEDESGIHVWDLRKAK-- 242
Query: 330 GLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIWDYEKVDTTGSAADPKGSDN 389
PV + GH V+ P+ + SA D ++N+W + +++D K S++
Sbjct: 243 ---VPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW-----YASATSSDDKTSES 294
Query: 390 PPG--------LFFRHAGHRDKIVDFHWNASEPWTI 417
P L + + D + W++ EPW
Sbjct: 295 PVESTRQRVNPLLNSYTDYEDSVYGLAWSSREPWVF 330
>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
repeat family protein | chr5:5504541-5509266 REVERSE
LENGTH=876
Length = 876
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 48/277 (17%)
Query: 118 EVNRIRELPQDGKIVATHTDSPNVLIWDVESQPNRQAVLGAPTSRPDLVLTGHKDDAEFA 177
E+ ++ L + + +A T+ V ++DV T VL GHK+ +
Sbjct: 360 EIADMKFLGDEEQFLAVATNLEEVRVYDV------------ATMSCSYVLAGHKE-VVLS 406
Query: 178 LDMCPTEP---FVLSGGKDKCVVLWSIHDHISTLGVEAGS--------------TTPKQG 220
LD C + +++G KDK V LW+ S +GV G + G
Sbjct: 407 LDTCVSSSGNVLIVTGSKDKTVRLWNATSK-SCIGVGTGHNGDILAVAFAKKSFSFFVSG 465
Query: 221 SGSK------VTGNSEKTTESPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLI 274
SG + + G SE + E ++ R + H + V + + C+ +D
Sbjct: 466 SGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSL-VCTGSEDRTAS 524
Query: 275 LWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSP 334
+W R+ K H + V+++ D ++T S D TV ++ GS
Sbjct: 525 IW--RLPDLVHVVTLKGHKRRIFSVEFSTVD-QCVMTASGDKTVKIWAISD------GSC 575
Query: 335 VHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIWD 371
+ F+GH ++VL + D + F S DG+L +W+
Sbjct: 576 LKTFEGHTSSVLRASFITDGTQ-FVSCGADGLLKLWN 611
>AT3G63460.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:23431009-23437241 REVERSE
LENGTH=1102
Length = 1102
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 264 FCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDR 323
S + ++WD R P+ + + WNP+ I+ S D++
Sbjct: 188 LASTSYNGTTVIWDLR-KQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPTL-- 244
Query: 324 RKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIWD 371
+ ++ R + SPV +F GH V+ ++WCP SS + A+D WD
Sbjct: 245 KLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
>AT3G63460.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:23431009-23437241 REVERSE
LENGTH=1104
Length = 1104
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 264 FCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDR 323
S + ++WD R P+ + + WNP+ I+ S D++
Sbjct: 188 LASTSYNGTTVIWDLR-KQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPTL-- 244
Query: 324 RKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIWD 371
+ ++ R + SPV +F GH V+ ++WCP SS + A+D WD
Sbjct: 245 KLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
>AT3G63460.3 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:23431009-23437241 REVERSE
LENGTH=1094
Length = 1094
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 264 FCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDR 323
S + ++WD R P+ + + WNP+ I+ S D++
Sbjct: 188 LASTSYNGTTVIWDLR-KQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPTL-- 244
Query: 324 RKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGILNIWD 371
+ ++ R + SPV +F GH V+ ++WCP SS + A+D WD
Sbjct: 245 KLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
>AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331506 REVERSE LENGTH=653
Length = 653
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 246 GHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHD 305
H +++ D+ FC + +FCS DD+ + +WD + H D+ VDW+P
Sbjct: 211 AHKESIRDLSFCKTDL-KFCSCSDDTTVKVWDFTKCVDESSLT--GHGWDVKSVDWHPTK 267
Query: 306 INFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDG 365
+ +++G D V ++D R G + GH VL V+W + + + +A++D
Sbjct: 268 -SLLVSGGKDQLVKLWDTRS------GRELCSLHGHKNIVLSVKWNQNGNWLL-TASKDQ 319
Query: 366 ILNIWD 371
I+ ++D
Sbjct: 320 IIKLYD 325
>AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331557 REVERSE LENGTH=647
Length = 647
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Query: 247 HTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDI 306
H +++ D+ FC + +FCS DD+ + +WD + H D+ VDW+P
Sbjct: 206 HKESIRDLSFCKTDL-KFCSCSDDTTVKVWDFTKCVDESSLT--GHGWDVKSVDWHPTK- 261
Query: 307 NFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSAAEDGI 366
+ +++G D V ++D R G + GH VL V+W + + + +A++D I
Sbjct: 262 SLLVSGGKDQLVKLWDTRS------GRELCSLHGHKNIVLSVKWNQNGNWLL-TASKDQI 314
Query: 367 LNIWDYEKV 375
+ ++D +
Sbjct: 315 IKLYDIRTM 323
>AT5G26900.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr5:9463752-9465086 FORWARD LENGTH=444
Length = 444
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 268 GDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFN 327
G D +++ D R+ S+ + + H ++ + W+ N +G DN VH++DR +
Sbjct: 228 GMDGKIVNNDVRIRSS-IVETYLGHTEEVCGLKWSESG-NKQASGGNDNVVHIWDRSLAS 285
Query: 328 NRGLGSPVHKFKGHDAAVLCVQWCPDKSSVF--GSAAEDGILNIWD 371
++ +H+F+ H AAV + WCP ++S+ G DG + W+
Sbjct: 286 SKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWN 331
>AT3G15980.5 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=930
Length = 930
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 177 ALDMCPTEPFVLSGGKDKCVVLWSIHDH-------ISTLGVEAGSTTP-KQGSGSKVTGN 228
++D+ PTEP++L+ V +W+ ++ L V + P KQ +
Sbjct: 20 SVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDM 79
Query: 229 SEKTTESPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKV 288
+ ++ +++ H+D + V P + P S DD + LWD G ++
Sbjct: 80 YIRVYNYNTMDKVKVFEAHSDYIRCVAVHP-TLPYVLSSSDDMLIKLWDWENG-WACTQI 137
Query: 289 EKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFK--GHDAAVL 346
+ H + V +NP D N + S D T+ +++ LGSP F H V
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN--------LGSPDPNFTLDAHQKGVN 189
Query: 347 CVQWCP--DKSSVFGSAAEDGILNIWDYE 373
CV + DK + + ++D +WDY+
Sbjct: 190 CVDYFTGGDKPYLI-TGSDDHTAKVWDYQ 217
>AT3G15980.4 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=914
Length = 914
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 177 ALDMCPTEPFVLSGGKDKCVVLWSIHDH-------ISTLGVEAGSTTP-KQGSGSKVTGN 228
++D+ PTEP++L+ V +W+ ++ L V + P KQ +
Sbjct: 20 SVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDM 79
Query: 229 SEKTTESPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKV 288
+ ++ +++ H+D + V P + P S DD + LWD G ++
Sbjct: 80 YIRVYNYNTMDKVKVFEAHSDYIRCVAVHP-TLPYVLSSSDDMLIKLWDWENG-WACTQI 137
Query: 289 EKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFK--GHDAAVL 346
+ H + V +NP D N + S D T+ +++ LGSP F H V
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN--------LGSPDPNFTLDAHQKGVN 189
Query: 347 CVQWCP--DKSSVFGSAAEDGILNIWDYE 373
CV + DK + + ++D +WDY+
Sbjct: 190 CVDYFTGGDKPYLI-TGSDDHTAKVWDYQ 217
>AT3G15980.1 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=909
Length = 909
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 177 ALDMCPTEPFVLSGGKDKCVVLWSIHDH-------ISTLGVEAGSTTP-KQGSGSKVTGN 228
++D+ PTEP++L+ V +W+ ++ L V + P KQ +
Sbjct: 20 SVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDM 79
Query: 229 SEKTTESPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKV 288
+ ++ +++ H+D + V P + P S DD + LWD G ++
Sbjct: 80 YIRVYNYNTMDKVKVFEAHSDYIRCVAVHP-TLPYVLSSSDDMLIKLWDWENG-WACTQI 137
Query: 289 EKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFK--GHDAAVL 346
+ H + V +NP D N + S D T+ +++ LGSP F H V
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN--------LGSPDPNFTLDAHQKGVN 189
Query: 347 CVQWCP--DKSSVFGSAAEDGILNIWDYE 373
CV + DK + + ++D +WDY+
Sbjct: 190 CVDYFTGGDKPYLI-TGSDDHTAKVWDYQ 217
>AT3G15980.3 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 177 ALDMCPTEPFVLSGGKDKCVVLWSIHDH-------ISTLGVEAGSTTP-KQGSGSKVTGN 228
++D+ PTEP++L+ V +W+ ++ L V + P KQ +
Sbjct: 20 SVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDM 79
Query: 229 SEKTTESPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKV 288
+ ++ +++ H+D + V P + P S DD + LWD G ++
Sbjct: 80 YIRVYNYNTMDKVKVFEAHSDYIRCVAVHP-TLPYVLSSSDDMLIKLWDWENG-WACTQI 137
Query: 289 EKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFK--GHDAAVL 346
+ H + V +NP D N + S D T+ +++ LGSP F H V
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN--------LGSPDPNFTLDAHQKGVN 189
Query: 347 CVQWCP--DKSSVFGSAAEDGILNIWDYE 373
CV + DK + + ++D +WDY+
Sbjct: 190 CVDYFTGGDKPYLI-TGSDDHTAKVWDYQ 217
>AT3G15980.2 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 177 ALDMCPTEPFVLSGGKDKCVVLWSIHDH-------ISTLGVEAGSTTP-KQGSGSKVTGN 228
++D+ PTEP++L+ V +W+ ++ L V + P KQ +
Sbjct: 20 SVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDM 79
Query: 229 SEKTTESPSVAPRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKV 288
+ ++ +++ H+D + V P + P S DD + LWD G ++
Sbjct: 80 YIRVYNYNTMDKVKVFEAHSDYIRCVAVHP-TLPYVLSSSDDMLIKLWDWENG-WACTQI 137
Query: 289 EKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFK--GHDAAVL 346
+ H + V +NP D N + S D T+ +++ LGSP F H V
Sbjct: 138 FEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWN--------LGSPDPNFTLDAHQKGVN 189
Query: 347 CVQWCP--DKSSVFGSAAEDGILNIWDYE 373
CV + DK + + ++D +WDY+
Sbjct: 190 CVDYFTGGDKPYLI-TGSDDHTAKVWDYQ 217
>AT5G27945.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:9976007-9977601 FORWARD LENGTH=428
Length = 428
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 268 GDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFN 327
G D +++ D R+ S+ + H ++ + W+ + +G DN VH++DR +
Sbjct: 212 GMDGKIVNNDVRIRSSIIGTY-VGHTEEVCGLKWSESGKK-LASGGNDNVVHIWDRSLAS 269
Query: 328 NRGLGSPVHKFKGHDAAVLCVQWCPDKSSVF--GSAAEDGILNIWD 371
+ +H+F+ H AAV + WCP ++S+ G DG +N W+
Sbjct: 270 SNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWN 315
>AT2G32700.2 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 37/207 (17%)
Query: 186 FVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQ------------GSGSKVTGNSEKTT 233
+ S G DK V +W++ TL VE +TP++ S T + +KT
Sbjct: 524 LLASAGHDKKVFIWNME----TLQVE---STPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 234 ESPSVAPRGIY----KGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVE 289
+ + G + GH V + F P CS ++ + WD A
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN------ASCV 630
Query: 290 KAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQ 349
+A G V + P F L +++NTV +FD N R V+ FKGH + V V
Sbjct: 631 RAVKGASTQVRFQPRTGQF-LAAASENTVSIFDIENNNKR-----VNIFKGHSSNVHSVC 684
Query: 350 WCPDKSSVFGSAAEDGILNIWDYEKVD 376
W P+ + S +ED + +W D
Sbjct: 685 WSPN-GELVASVSEDAV-KLWSLSSGD 709
>AT2G32700.1 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 37/207 (17%)
Query: 186 FVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQ------------GSGSKVTGNSEKTT 233
+ S G DK V +W++ TL VE +TP++ S T + +KT
Sbjct: 524 LLASAGHDKKVFIWNME----TLQVE---STPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 234 ESPSVAPRGIY----KGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVE 289
+ + G + GH V + F P CS ++ + WD A
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN------ASCV 630
Query: 290 KAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQ 349
+A G V + P F L +++NTV +FD N R V+ FKGH + V V
Sbjct: 631 RAVKGASTQVRFQPRTGQF-LAAASENTVSIFDIENNNKR-----VNIFKGHSSNVHSVC 684
Query: 350 WCPDKSSVFGSAAEDGILNIWDYEKVD 376
W P+ + S +ED + +W D
Sbjct: 685 WSPN-GELVASVSEDAV-KLWSLSSGD 709
>AT2G32700.4 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 37/207 (17%)
Query: 186 FVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQ------------GSGSKVTGNSEKTT 233
+ S G DK V +W++ TL VE +TP++ S T + +KT
Sbjct: 524 LLASAGHDKKVFIWNME----TLQVE---STPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 234 ESPSVAPRGIY----KGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVE 289
+ + G + GH V + F P CS ++ + WD A
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN------ASCV 630
Query: 290 KAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQ 349
+A G V + P F L +++NTV +FD N R V+ FKGH + V V
Sbjct: 631 RAVKGASTQVRFQPRTGQF-LAAASENTVSIFDIENNNKR-----VNIFKGHSSNVHSVC 684
Query: 350 WCPDKSSVFGSAAEDGILNIWDYEKVD 376
W P+ + S +ED + +W D
Sbjct: 685 WSPN-GELVASVSEDAV-KLWSLSSGD 709
>AT2G32700.5 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 37/207 (17%)
Query: 186 FVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQ------------GSGSKVTGNSEKTT 233
+ S G DK V +W++ TL VE +TP++ S T + +KT
Sbjct: 524 LLASAGHDKKVFIWNME----TLQVE---STPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 234 ESPSVAPRGIY----KGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVE 289
+ + G + GH V + F P CS ++ + WD A
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN------ASCV 630
Query: 290 KAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQ 349
+A G V + P F L +++NTV +FD N R V+ FKGH + V V
Sbjct: 631 RAVKGASTQVRFQPRTGQF-LAAASENTVSIFDIENNNKR-----VNIFKGHSSNVHSVC 684
Query: 350 WCPDKSSVFGSAAEDGILNIWDYEKVD 376
W P+ + S +ED + +W D
Sbjct: 685 WSPN-GELVASVSEDAV-KLWSLSSGD 709
>AT2G32700.3 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=787
Length = 787
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 37/207 (17%)
Query: 186 FVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQ------------GSGSKVTGNSEKTT 233
+ S G DK V +W++ TL VE +TP++ S T + +KT
Sbjct: 524 LLASAGHDKKVFIWNME----TLQVE---STPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 234 ESPSVAPRGIY----KGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVE 289
+ + G + GH V + F P CS ++ + WD A
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN------ASCV 630
Query: 290 KAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQ 349
+A G V + P F L +++NTV +FD N R V+ FKGH + V V
Sbjct: 631 RAVKGASTQVRFQPRTGQF-LAAASENTVSIFDIENNNKR-----VNIFKGHSSNVHSVC 684
Query: 350 WCPDKSSVFGSAAEDGILNIWDYEKVD 376
W P+ + S +ED + +W D
Sbjct: 685 WSPN-GELVASVSEDAV-KLWSLSSGD 709
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
LENGTH=473
Length = 473
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 236 PSVA--PRGIYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHD 293
PSV+ P+ GH V V F P S D + LW+ G V + H
Sbjct: 346 PSVSKQPKKRLTGHQQLVNHVYFSPD-GKWIASASFDKSVRLWNGITGQ--FVTVFRGHV 402
Query: 294 GDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPD 353
G ++ V W+ D +L+GS D+T+ +++ R + GH V V W PD
Sbjct: 403 GPVYQVSWSA-DSRLLLSGSKDSTLKIWEIRTKKLK------QDLPGHADEVFAVDWSPD 455
Query: 354 KSSVFGSAAEDGILNIW 370
V S +D +L +W
Sbjct: 456 GEKVV-SGGKDRVLKLW 471
>AT2G32700.7 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=806
Length = 806
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 37/207 (17%)
Query: 186 FVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQ------------GSGSKVTGNSEKTT 233
+ S G DK V +W++ TL VE +TP++ S T + +KT
Sbjct: 543 LLASAGHDKKVFIWNME----TLQVE---STPEEHAHIITDVRFRPNSTQLATSSFDKTI 595
Query: 234 ESPSVAPRGIY----KGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVE 289
+ + G + GH V + F P CS ++ + WD A
Sbjct: 596 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN------ASCV 649
Query: 290 KAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQ 349
+A G V + P F L +++NTV +FD N R V+ FKGH + V V
Sbjct: 650 RAVKGASTQVRFQPRTGQF-LAAASENTVSIFDIENNNKR-----VNIFKGHSSNVHSVC 703
Query: 350 WCPDKSSVFGSAAEDGILNIWDYEKVD 376
W P+ + S +ED + +W D
Sbjct: 704 WSPN-GELVASVSEDAV-KLWSLSSGD 728
>AT2G32700.6 | Symbols: LUH | LEUNIG_homolog |
chr2:13867235-13871844 FORWARD LENGTH=785
Length = 785
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 37/207 (17%)
Query: 186 FVLSGGKDKCVVLWSIHDHISTLGVEAGSTTPKQ------------GSGSKVTGNSEKTT 233
+ S G DK V +W++ TL VE +TP++ S T + +KT
Sbjct: 522 LLASAGHDKKVFIWNME----TLQVE---STPEEHAHIITDVRFRPNSTQLATSSFDKTI 574
Query: 234 ESPSVAPRGIY----KGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVE 289
+ + G + GH V + F P CS ++ + WD A
Sbjct: 575 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDIN------ASCV 628
Query: 290 KAHDGDLHCVDWNPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQ 349
+A G V + P F L +++NTV +FD N R V+ FKGH + V V
Sbjct: 629 RAVKGASTQVRFQPRTGQF-LAAASENTVSIFDIENNNKR-----VNIFKGHSSNVHSVC 682
Query: 350 WCPDKSSVFGSAAEDGILNIWDYEKVD 376
W P+ + S +ED + +W D
Sbjct: 683 WSPN-GELVASVSEDAV-KLWSLSSGD 707
>AT1G79990.3 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=920
Length = 920
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 243 IYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDW- 301
I++GH+ V V F P F S D + +W+ +GS AH ++CVD+
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN--LGSPDPNFTLDAHLKGVNCVDYF 194
Query: 302 NPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSA 361
D +++TGS D+T ++D + S V +GH V V + P+ + +
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQT------KSCVQTLEGHTHNVSAVSFHPELPIII-TG 247
Query: 362 AEDGILNIW 370
+EDG + IW
Sbjct: 248 SEDGTVRIW 256
>AT1G52360.1 | Symbols: | Coatomer, beta' subunit |
chr1:19499282-19505397 FORWARD LENGTH=926
Length = 926
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 243 IYKGHTDTVEDVQFCPSSAPEFCSVGDDSRLILWDARVGSTPVAKVEKAHDGDLHCVDW- 301
I++GH+ V V F P F S D + +W+ +GS AH ++CVD+
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN--LGSPDPNFTLDAHQKGVNCVDYF 194
Query: 302 NPHDINFILTGSADNTVHMFDRRKFNNRGLGSPVHKFKGHDAAVLCVQWCPDKSSVFGSA 361
D +++TGS D+T ++D + S V +GH V V + P+ + +
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQT------KSCVQTLEGHTHNVSAVCFHPELPIII-TG 247
Query: 362 AEDGILNIW 370
+EDG + IW
Sbjct: 248 SEDGTVRIW 256