Miyakogusa Predicted Gene

Lj0g3v0060199.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0060199.1 Non Chatacterized Hit- tr|I1LB72|I1LB72_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13075
PE,86.99,0,seg,NULL; no description,Protein phosphatase 2C-like;
PROTEIN PHOSPHATASE 2C CONTAINING
PROTEIN,NULL,NODE_23144_length_470_cov_223.912766.path1.1
         (124 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09160.1 | Symbols:  | Protein phosphatase 2C family protein ...   198   5e-52
AT1G09160.2 | Symbols:  | Protein phosphatase 2C family protein ...   198   5e-52
AT1G68410.2 | Symbols:  | Protein phosphatase 2C family protein ...   183   3e-47
AT1G68410.1 | Symbols:  | Protein phosphatase 2C family protein ...   183   3e-47
AT1G47380.1 | Symbols:  | Protein phosphatase 2C family protein ...   159   4e-40
AT2G20630.1 | Symbols: PIA1 | PP2C induced by AVRRPM1 | chr2:889...    47   4e-06
AT2G34740.2 | Symbols:  | Protein phosphatase 2C family protein ...    46   5e-06
AT2G20630.2 | Symbols: PIA1 | PP2C induced by AVRRPM1 | chr2:889...    46   5e-06
AT2G34740.1 | Symbols:  | Protein phosphatase 2C family protein ...    46   6e-06
AT1G67820.1 | Symbols:  | Protein phosphatase 2C family protein ...    45   9e-06

>AT1G09160.1 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:2953199-2955059 REVERSE LENGTH=428
          Length = 428

 Score =  198 bits (504), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 97/123 (78%), Positives = 106/123 (86%)

Query: 2   SAAIFTKENIINNVMSALPQDLSRDEWLQALPRALVAAFVKTDIEFQQKGENSGTTATFV 61
           SAAI+TKE+++ NV+SA+PQ  SRDEWLQALPRALVA FVKTDIEFQQKGE SGTT TFV
Sbjct: 79  SAAIYTKEHLLENVVSAIPQGASRDEWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFV 138

Query: 62  LIDGWTVTVACVGDSRCILDTQGGVVSLLTVDHRLXXXXXXXXXXTASGGEVGRLNVFGG 121
           +IDGWT+TVA VGDSRCILDTQGGVVSLLTVDHRL          TASGGEVGRLNVFGG
Sbjct: 139 IIDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERITASGGEVGRLNVFGG 198

Query: 122 SEV 124
           +EV
Sbjct: 199 NEV 201


>AT1G09160.2 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:2953199-2955059 REVERSE LENGTH=428
          Length = 428

 Score =  198 bits (504), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 97/123 (78%), Positives = 106/123 (86%)

Query: 2   SAAIFTKENIINNVMSALPQDLSRDEWLQALPRALVAAFVKTDIEFQQKGENSGTTATFV 61
           SAAI+TKE+++ NV+SA+PQ  SRDEWLQALPRALVA FVKTDIEFQQKGE SGTT TFV
Sbjct: 79  SAAIYTKEHLLENVVSAIPQGASRDEWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFV 138

Query: 62  LIDGWTVTVACVGDSRCILDTQGGVVSLLTVDHRLXXXXXXXXXXTASGGEVGRLNVFGG 121
           +IDGWT+TVA VGDSRCILDTQGGVVSLLTVDHRL          TASGGEVGRLNVFGG
Sbjct: 139 IIDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERITASGGEVGRLNVFGG 198

Query: 122 SEV 124
           +EV
Sbjct: 199 NEV 201


>AT1G68410.2 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:25650262-25652255 REVERSE LENGTH=436
          Length = 436

 Score =  183 bits (464), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 102/123 (82%)

Query: 2   SAAIFTKENIINNVMSALPQDLSRDEWLQALPRALVAAFVKTDIEFQQKGENSGTTATFV 61
           +AA++T+EN++N+V+SALP  LSRDEWL ALPRALV+ FVKTD EFQ +GE SGTTATFV
Sbjct: 84  AAAVYTRENLLNHVISALPSGLSRDEWLHALPRALVSGFVKTDKEFQSRGETSGTTATFV 143

Query: 62  LIDGWTVTVACVGDSRCILDTQGGVVSLLTVDHRLXXXXXXXXXXTASGGEVGRLNVFGG 121
           ++DGWTVTVACVGDSRCILDT+GG VS LTVDHRL          TASGGEVGRL++ GG
Sbjct: 144 IVDGWTVTVACVGDSRCILDTKGGSVSNLTVDHRLEDNTEERERVTASGGEVGRLSIVGG 203

Query: 122 SEV 124
            E+
Sbjct: 204 VEI 206


>AT1G68410.1 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:25650262-25652255 REVERSE LENGTH=436
          Length = 436

 Score =  183 bits (464), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 102/123 (82%)

Query: 2   SAAIFTKENIINNVMSALPQDLSRDEWLQALPRALVAAFVKTDIEFQQKGENSGTTATFV 61
           +AA++T+EN++N+V+SALP  LSRDEWL ALPRALV+ FVKTD EFQ +GE SGTTATFV
Sbjct: 84  AAAVYTRENLLNHVISALPSGLSRDEWLHALPRALVSGFVKTDKEFQSRGETSGTTATFV 143

Query: 62  LIDGWTVTVACVGDSRCILDTQGGVVSLLTVDHRLXXXXXXXXXXTASGGEVGRLNVFGG 121
           ++DGWTVTVACVGDSRCILDT+GG VS LTVDHRL          TASGGEVGRL++ GG
Sbjct: 144 IVDGWTVTVACVGDSRCILDTKGGSVSNLTVDHRLEDNTEERERVTASGGEVGRLSIVGG 203

Query: 122 SEV 124
            E+
Sbjct: 204 VEI 206


>AT1G47380.1 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:17373004-17375305 REVERSE LENGTH=428
          Length = 428

 Score =  159 bits (402), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 74/123 (60%), Positives = 94/123 (76%)

Query: 2   SAAIFTKENIINNVMSALPQDLSRDEWLQALPRALVAAFVKTDIEFQQKGENSGTTATFV 61
           +AAI+TKEN++NNV++A+P DL+RDEW+ ALPRALVA FVKTD +FQ++   SGTT TFV
Sbjct: 75  AAAIYTKENLLNNVLAAIPSDLNRDEWVAALPRALVAGFVKTDKDFQERARTSGTTVTFV 134

Query: 62  LIDGWTVTVACVGDSRCILDTQGGVVSLLTVDHRLXXXXXXXXXXTASGGEVGRLNVFGG 121
           +++GW V+VA VGDSRCIL+   G V  L+ DHRL          TASGGEVGRLN  GG
Sbjct: 135 IVEGWVVSVASVGDSRCILEPAEGGVYYLSADHRLEINEEERDRVTASGGEVGRLNTGGG 194

Query: 122 SEV 124
           +E+
Sbjct: 195 TEI 197


>AT2G20630.1 | Symbols: PIA1 | PP2C induced by AVRRPM1 |
           chr2:8897826-8899648 REVERSE LENGTH=279
          Length = 279

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 12/96 (12%)

Query: 4   AIFTKENIINNVMSALPQDLSRDEWLQALPRALVAAFVKTDIEFQQK----GENSGTTAT 59
           A + + N+ +N++        +D W      A+  A++ TD    ++    G+   T  T
Sbjct: 76  AKYLQTNLFDNILK------EKDFWTDT-KNAIRNAYISTDAVILEQSLKLGKGGSTAVT 128

Query: 60  FVLIDGWTVTVACVGDSRCILDTQGGVVSLLTVDHR 95
            +LIDG T+ +A VGDSR ++ ++ GV S L+VDH 
Sbjct: 129 GILIDGKTLVIANVGDSRAVM-SKNGVASQLSVDHE 163


>AT2G34740.2 | Symbols:  | Protein phosphatase 2C family protein |
           chr2:14658475-14660139 FORWARD LENGTH=325
          Length = 325

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 23  LSRDEWLQALPRALVAAFVKTDIEFQQK--GENSGTTA-TFVLIDGWTVTVACVGDSRCI 79
           LS+ ++ +   +A+  A+  TD    Q   G   G+TA T ++IDG  + VA VGDSR I
Sbjct: 158 LSQPDFWRNPKKAIKRAYKSTDDYILQNVVGPRGGSTAVTAIVIDGKKIVVANVGDSRAI 217

Query: 80  LDTQGGVVSLLTVDH 94
           L  +  VV  +TVDH
Sbjct: 218 LCRESDVVKQITVDH 232


>AT2G20630.2 | Symbols: PIA1 | PP2C induced by AVRRPM1 |
           chr2:8897335-8899648 REVERSE LENGTH=290
          Length = 290

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 12/95 (12%)

Query: 4   AIFTKENIINNVMSALPQDLSRDEWLQALPRALVAAFVKTDIEFQQK----GENSGTTAT 59
           A + + N+ +N++        +D W      A+  A++ TD    ++    G+   T  T
Sbjct: 76  AKYLQTNLFDNILK------EKDFWTDT-KNAIRNAYISTDAVILEQSLKLGKGGSTAVT 128

Query: 60  FVLIDGWTVTVACVGDSRCILDTQGGVVSLLTVDH 94
            +LIDG T+ +A VGDSR ++ ++ GV S L+VDH
Sbjct: 129 GILIDGKTLVIANVGDSRAVM-SKNGVASQLSVDH 162


>AT2G34740.1 | Symbols:  | Protein phosphatase 2C family protein |
           chr2:14658730-14660305 FORWARD LENGTH=339
          Length = 339

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 23  LSRDEWLQALPRALVAAFVKTDIEFQQK--GENSGTTA-TFVLIDGWTVTVACVGDSRCI 79
           LS+ ++ +   +A+  A+  TD    Q   G   G+TA T ++IDG  + VA VGDSR I
Sbjct: 144 LSQPDFWRNPKKAIKRAYKSTDDYILQNVVGPRGGSTAVTAIVIDGKKIVVANVGDSRAI 203

Query: 80  LDTQGGVVSLLTVDH 94
           L  +  VV  +TVDH
Sbjct: 204 LCRESDVVKQITVDH 218


>AT1G67820.1 | Symbols:  | Protein phosphatase 2C family protein |
           chr1:25429882-25431484 FORWARD LENGTH=445
          Length = 445

 Score = 45.4 bits (106), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)

Query: 3   AAIFTKENIINNVMSALPQDLSRDEWLQALPRALVAAFVKTDIEFQQKGENSGTTATFVL 62
           AA F  EN+   V+  +     ++E ++A      AAF++TD +F +KG  SG      +
Sbjct: 163 AAEFVAENLHKYVVEMMENCKGKEEKVEAFK----AAFLRTDRDFLEKGVVSGACCVTAV 218

Query: 63  IDGWTVTVACVGDSRCILDTQGGVVSLLTVDHR 95
           I    + V+ +GD R +L  + GV   LT DH+
Sbjct: 219 IQDQEMIVSNLGDCRAVL-CRAGVAEALTDDHK 250