Miyakogusa Predicted Gene
- Lj0g3v0060129.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0060129.1 Non Chatacterized Hit- tr|I1NJ45|I1NJ45_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,89.3,0,SUBFAMILY NOT
NAMED,NULL; SYNTAXIN,NULL; SNARE,Target SNARE coiled-coil domain;
Syntaxin,Syntaxin, N,NODE_69111_length_1537_cov_29.936890.path1.1
(323 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G05710.2 | Symbols: SYP43, ATSYP43 | syntaxin of plants 43 | ... 511 e-145
AT3G05710.1 | Symbols: SYP43, ATSYP43 | syntaxin of plants 43 | ... 505 e-143
AT5G26980.2 | Symbols: SYP41, ATSYP41, ATTLG2A | syntaxin of pla... 496 e-140
AT5G26980.1 | Symbols: SYP41, ATSYP41, ATTLG2A | syntaxin of pla... 496 e-140
AT4G02195.1 | Symbols: SYP42, TLG2B, ATSYP42, ATTLG2B | syntaxin... 421 e-118
AT5G46860.1 | Symbols: VAM3, ATVAM3, SYP22, ATSYP22, SGR3 | Synt... 61 9e-10
AT5G16830.1 | Symbols: SYP21, ATSYP21, PEP12, ATPEP12, PEP12P | ... 59 4e-09
>AT3G05710.2 | Symbols: SYP43, ATSYP43 | syntaxin of plants 43 |
chr3:1685262-1687229 FORWARD LENGTH=331
Length = 331
Score = 511 bits (1316), Expect = e-145, Method: Compositional matrix adjust.
Identities = 251/335 (74%), Positives = 287/335 (85%), Gaps = 16/335 (4%)
Query: 1 MATRNRTLLFRKHRDALKSVRFXXXXXXXXXXX------------GPVIELVSTSLLNPN 48
MATRNRTLLFRK+R++L+SVR GPVIE+ STSLLNPN
Sbjct: 1 MATRNRTLLFRKYRNSLRSVRAPMGSSSSSTLTEHNSLTGAKSGLGPVIEMASTSLLNPN 60
Query: 49 RSYTPLSTEDPANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMP 108
RSY P+STEDP NSS+G I TVGLPP WVDVSEEIS +QRAR+KMAEL KAHAKALMP
Sbjct: 61 RSYAPVSTEDPGNSSRGTI--TVGLPPDWVDVSEEISVYIQRARTKMAELGKAHAKALMP 118
Query: 109 SFGDGKEDQHAIESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLS 168
SFGDGKEDQH IE+LT E+T L+K+SEK+L+RLSAAGPSEDSNVRKNVQRSLATDLQNLS
Sbjct: 119 SFGDGKEDQHQIETLTQEVTFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLS 178
Query: 169 VELRKKQSTYLKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNMVFSEHQMAKLKKSEA 228
+ELRKKQSTYLKRLR QKE DG DLE+NLNG + + EDDD D+MVFSEHQM+K+KKSE
Sbjct: 179 MELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDFDDMVFSEHQMSKIKKSEE 236
Query: 229 FTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQK 288
++EREKEIQQVVESV+ELAQIMKDLS LVIDQGTIVDRIDYNIQNVA+TV+DGLKQLQK
Sbjct: 237 ISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQK 296
Query: 289 AERTQKKGGMVMCATVLLIMCFVMLVLLVIKEIIL 323
AERTQ++GGMVMCA+VL+I+CF+MLVLL++KEI+L
Sbjct: 297 AERTQRQGGMVMCASVLVILCFIMLVLLILKEILL 331
>AT3G05710.1 | Symbols: SYP43, ATSYP43 | syntaxin of plants 43 |
chr3:1685262-1687229 FORWARD LENGTH=330
Length = 330
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/335 (74%), Positives = 286/335 (85%), Gaps = 17/335 (5%)
Query: 1 MATRNRTLLFRKHRDALKSVRFXXXXXXXXXXX------------GPVIELVSTSLLNPN 48
MATRNRTLLFRK+R++L+SVR GPVIE+ STSLLNPN
Sbjct: 1 MATRNRTLLFRKYRNSLRSVRAPMGSSSSSTLTEHNSLTGAKSGLGPVIEMASTSLLNPN 60
Query: 49 RSYTPLSTEDPANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMP 108
RSY P+STEDP NS +G I TVGLPP WVDVSEEIS +QRAR+KMAEL KAHAKALMP
Sbjct: 61 RSYAPVSTEDPGNS-RGTI--TVGLPPDWVDVSEEISVYIQRARTKMAELGKAHAKALMP 117
Query: 109 SFGDGKEDQHAIESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLS 168
SFGDGKEDQH IE+LT E+T L+K+SEK+L+RLSAAGPSEDSNVRKNVQRSLATDLQNLS
Sbjct: 118 SFGDGKEDQHQIETLTQEVTFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLS 177
Query: 169 VELRKKQSTYLKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNMVFSEHQMAKLKKSEA 228
+ELRKKQSTYLKRLR QKE DG DLE+NLNG + + EDDD D+MVFSEHQM+K+KKSE
Sbjct: 178 MELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDFDDMVFSEHQMSKIKKSEE 235
Query: 229 FTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQK 288
++EREKEIQQVVESV+ELAQIMKDLS LVIDQGTIVDRIDYNIQNVA+TV+DGLKQLQK
Sbjct: 236 ISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQK 295
Query: 289 AERTQKKGGMVMCATVLLIMCFVMLVLLVIKEIIL 323
AERTQ++GGMVMCA+VL+I+CF+MLVLL++KEI+L
Sbjct: 296 AERTQRQGGMVMCASVLVILCFIMLVLLILKEILL 330
>AT5G26980.2 | Symbols: SYP41, ATSYP41, ATTLG2A | syntaxin of plants
41 | chr5:9488724-9490604 REVERSE LENGTH=322
Length = 322
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/327 (76%), Positives = 283/327 (86%), Gaps = 9/327 (2%)
Query: 1 MATRNRTLLFRKHRDALKSVRFXXXXXXXXXXX----GPVIELVSTSLLNPNRSYTPLST 56
MATRNRTLLFRK+R++L+SVR GPVIE+ STSLLNPNRSY P+ST
Sbjct: 1 MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRSYAPIST 60
Query: 57 EDPANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMPSFGDGKED 116
EDP SSKGAI TVGLPPAWVDVSEEIS N+QRAR+KMAEL KAHAKALMPSFGDGKED
Sbjct: 61 EDPGTSSKGAI--TVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKED 118
Query: 117 QHAIESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLSVELRKKQS 176
QH IESLT EIT L+K+SEK+L+RLSA+GPSEDSNVRKNVQRSLATDLQ LS+ELRKKQS
Sbjct: 119 QHNIESLTQEITFLLKKSEKQLQRLSASGPSEDSNVRKNVQRSLATDLQLLSMELRKKQS 178
Query: 177 TYLKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNMVFSEHQMAKLKKSEAFTVEREKE 236
TYLKRLRQQKE DG+DLE+NL+ + R E+DD +M +EHQM+K+KKSE +VEREKE
Sbjct: 179 TYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDFGDM-LNEHQMSKIKKSEEVSVEREKE 235
Query: 237 IQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKG 296
IQQVVESVN+LAQIMKDLS LVIDQGTIVDRIDYNI+NVATTVEDGLKQLQKAERTQ+ G
Sbjct: 236 IQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQKAERTQRHG 295
Query: 297 GMVMCATVLLIMCFVMLVLLVIKEIIL 323
GMV CA+VL+I+CF+ML+LL++KEI L
Sbjct: 296 GMVKCASVLVILCFIMLLLLILKEIFL 322
>AT5G26980.1 | Symbols: SYP41, ATSYP41, ATTLG2A | syntaxin of plants
41 | chr5:9488724-9490604 REVERSE LENGTH=322
Length = 322
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/327 (76%), Positives = 283/327 (86%), Gaps = 9/327 (2%)
Query: 1 MATRNRTLLFRKHRDALKSVRFXXXXXXXXXXX----GPVIELVSTSLLNPNRSYTPLST 56
MATRNRTLLFRK+R++L+SVR GPVIE+ STSLLNPNRSY P+ST
Sbjct: 1 MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRSYAPIST 60
Query: 57 EDPANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMPSFGDGKED 116
EDP SSKGAI TVGLPPAWVDVSEEIS N+QRAR+KMAEL KAHAKALMPSFGDGKED
Sbjct: 61 EDPGTSSKGAI--TVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKED 118
Query: 117 QHAIESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLSVELRKKQS 176
QH IESLT EIT L+K+SEK+L+RLSA+GPSEDSNVRKNVQRSLATDLQ LS+ELRKKQS
Sbjct: 119 QHNIESLTQEITFLLKKSEKQLQRLSASGPSEDSNVRKNVQRSLATDLQLLSMELRKKQS 178
Query: 177 TYLKRLRQQKEGQDGVDLEINLNGGKSRYEDDDLDNMVFSEHQMAKLKKSEAFTVEREKE 236
TYLKRLRQQKE DG+DLE+NL+ + R E+DD +M +EHQM+K+KKSE +VEREKE
Sbjct: 179 TYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDFGDM-LNEHQMSKIKKSEEVSVEREKE 235
Query: 237 IQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKG 296
IQQVVESVN+LAQIMKDLS LVIDQGTIVDRIDYNI+NVATTVEDGLKQLQKAERTQ+ G
Sbjct: 236 IQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQKAERTQRHG 295
Query: 297 GMVMCATVLLIMCFVMLVLLVIKEIIL 323
GMV CA+VL+I+CF+ML+LL++KEI L
Sbjct: 296 GMVKCASVLVILCFIMLLLLILKEIFL 322
>AT4G02195.1 | Symbols: SYP42, TLG2B, ATSYP42, ATTLG2B | syntaxin of
plants 42 | chr4:970099-972192 REVERSE LENGTH=323
Length = 323
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 1 MATRNRTLLFRKHRDALKSVRFXXXXXXXXXXXGPVIELVSTSLLNPNRS-YTPLSTEDP 59
MATRNRT ++RKHRDA KS R GPVIE+VS S N S Y PL++ DP
Sbjct: 1 MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDP 60
Query: 60 ANSSKGAIPITVGLPPAWVDVSEEISANVQRARSKMAELAKAHAKALMPSFGDGKEDQHA 119
SS A T+G+PPAWVD SEEI+ N+Q+ R KM ELAKAH+KALMP+FGD K
Sbjct: 61 GPSSSDAF--TIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHRE 118
Query: 120 IESLTYEITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSTYL 179
+E LT+EITDL+++SEK+L+ LS GPSE+SN+RKNVQRSLATDLQNLS+ELR+KQSTYL
Sbjct: 119 VEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYL 178
Query: 180 KRLRQQKEGQDGVDLEINLNGGKSRY-EDDDLDNMVFSEHQMAKLKKSEAFTVEREKEIQ 238
KRL+QQKEGQD VDLE N+NG SR E+D+L M F EHQ KLK+ + + ERE+EIQ
Sbjct: 179 KRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQ 238
Query: 239 QVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKGGM 298
QV+ SVN+LAQIMKDLS LVIDQGTIVDRIDYN+QNV+T+VE+G KQLQKAERTQ++G M
Sbjct: 239 QVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAM 298
Query: 299 VMCATVLLIMCFVMLVLLVIKEIIL 323
V CAT+LL++C +M+VLL++K I+
Sbjct: 299 VKCATILLVLCLIMIVLLILKNILF 323
>AT5G46860.1 | Symbols: VAM3, ATVAM3, SYP22, ATSYP22, SGR3 |
Syntaxin/t-SNARE family protein | chr5:19012342-19013795
REVERSE LENGTH=268
Length = 268
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 127 ITDLIKRSEKKLRRLSAAGPSEDSNVRKNVQRS-LATDLQNLSVELRKKQSTYLKRLRQQ 185
I L+K + KL+ S N K + + LA D Q + E +K Q T +R
Sbjct: 69 IGQLVKDTSAKLKEASETDHQSGVNPSKKIADAKLARDFQAVLKEFQKAQQTAAER---- 124
Query: 186 KEGQDGVDLEINLNGGKSRYEDDDLDNMVFSEHQMAKLKK------------SEAFTVER 233
+ + + S Y ++D + Q+ + K+ +EA ER
Sbjct: 125 ---ETTYTPFVPQSALPSSYTAGEVDKVPEQRAQLQESKRQELVLLDNEIAFNEAVIEER 181
Query: 234 EKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQ 293
E+ IQ++ + + E+ +I KDL+VLV DQG ++D I +I N G QL +A +TQ
Sbjct: 182 EQGIQEIHQQIGEVNEIFKDLAVLVNDQGVMIDDIGTHIDNSRAATSQGKSQLVQAAKTQ 241
Query: 294 KKGGMVMCATVLLIMCF 310
K + C LL++ F
Sbjct: 242 KSNSSLTC---LLLVIF 255
>AT5G16830.1 | Symbols: SYP21, ATSYP21, PEP12, ATPEP12, PEP12P |
syntaxin of plants 21 | chr5:5533076-5535152 REVERSE
LENGTH=279
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 40/259 (15%)
Query: 74 PPAWVDVSEEISANVQRARSKMAELAKAHAKALMPSFG---DGKEDQHAIESLTYEITDL 130
P + D S+E++A + R + + + L+ S G D E + ++ +I++L
Sbjct: 26 PSSRGDPSQEVAAGIFRISTAVNSFFR-----LVNSIGTPKDTLELRDKLQKTRLQISEL 80
Query: 131 IKRSEKKLRRLSAAG-PSEDSNVRKNVQRSLATDLQNLSVELRKKQSTYLKRLRQQKE-- 187
+K + KL+ S A S ++K LA D Q++ E +K Q RL ++E
Sbjct: 81 VKNTSAKLKEASEADLHGSASQIKKIADAKLAKDFQSVLKEFQKAQ-----RLAAEREIT 135
Query: 188 GQDGVDLEINLNGGKSRYEDDDLD--NMVFSEHQMAKLKK--------------SEAFTV 231
V EI + Y +LD ++ S+ Q L+ +EA
Sbjct: 136 YTPVVTKEI-----PTSYNAPELDTESLRISQQQALLLQSRRQEVVFLDNEITFNEAIIE 190
Query: 232 EREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAER 291
ERE+ I+++ + + ++ + KDL+++V QG IVD I N+ N QL+KA +
Sbjct: 191 EREQGIREIEDQIRDVNGMFKDLALMVNHQGNIVDDISSNLDNSHAATTQATVQLRKAAK 250
Query: 292 TQKKGGMVMCATVLLIMCF 310
TQ+ + C LLI+ F
Sbjct: 251 TQRSNSSLTC---LLILIF 266