Miyakogusa Predicted Gene

Lj0g3v0059869.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0059869.1 tr|F5AIA8|F5AIA8_HELAN More axillary branches 2
(Fragment) OS=Helianthus annuus PE=4 SV=1,35.47,2e-18,Liste_lipo_26:
bacterial surface protein 26-residu,Bacterial surface protein
26-residue repeat; Leuc,CUFF.2651.1
         (509 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42620.1 | Symbols: MAX2, ORE9, PPS | RNI-like superfamily pr...   385   e-107
AT5G01720.1 | Symbols:  | RNI-like superfamily protein | chr5:26...    51   2e-06
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1...    50   3e-06
AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein | c...    50   5e-06
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei...    49   6e-06
AT1G80570.1 | Symbols:  | RNI-like superfamily protein | chr1:30...    49   9e-06
AT1G80570.3 | Symbols:  | RNI-like superfamily protein | chr1:30...    49   9e-06

>AT2G42620.1 | Symbols: MAX2, ORE9, PPS | RNI-like superfamily
           protein | chr2:17756170-17758251 FORWARD LENGTH=693
          Length = 693

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 215/422 (50%), Positives = 281/422 (66%), Gaps = 25/422 (5%)

Query: 84  ISSESEFDGLFEHCRS-LTSLDLSSFYDWSTWNLLSALKSNPVTTASMRRLNLLTASLKE 142
           I +  +F  +FEHC   L SLDLS+FY W T +L   L       A + RL+LLTAS  E
Sbjct: 143 IPTGGDFVPIFEHCGGFLESLDLSNFYHW-TEDLPPVLLRYADVAARLTRLDLLTASFTE 201

Query: 143 GIKSVEIQDITRACPNLEHLLLACTFDPKHSGYVGDETLLAIASNCPKLTLLHLGDTASL 202
           G KS EI  IT++CPNL+   +ACTFDP++  +VGDETL A+A++ PKLTLLH+ DTASL
Sbjct: 202 GYKSSEIVSITKSCPNLKTFRVACTFDPRYFEFVGDETLSAVATSSPKLTLLHMVDTASL 261

Query: 203 SNLRGDPEDTGVDARISGAAMVEFFCGLPLLEELVLDVCKNVRDSCFLLEVLGTKCPKLR 262
           +N R  P     D+ ++   ++E F GLP LEELVLDV K+V+ S   LE L +KC KLR
Sbjct: 262 ANPRAIPGTEAGDSAVTAGTLIEVFSGLPNLEELVLDVGKDVKHSGVALEALNSKCKKLR 321

Query: 263 VLQLRQFQWICLAI-WSQLHGVALCQGLQSLSISNCADLTDKGLIVIARGCSRLVKFHVQ 321
           VL+L QFQ +C A  W +L GVALC GLQSLSI N  DLTD GL+ I RGC +L  F +Q
Sbjct: 322 VLKLGQFQGVCSATEWRRLDGVALCGGLQSLSIKNSGDLTDMGLVAIGRGCCKLTTFEIQ 381

Query: 322 GCKGITEKGLKALACLLRRTLTDVKISCCLNLDASACLRALEPIRGRVERLHVDCVWSGL 381
           GC+ +T  GL+ +  L  +TLTDV+ISCC NLD +A L+A+EPI  R++RLH+DCVWSG 
Sbjct: 382 GCENVTVDGLRTMVSLRSKTLTDVRISCCKNLDTAASLKAIEPICDRIKRLHIDCVWSGS 441

Query: 382 KETDVDLNNLEEPCSSNLNDEFIGCPGSVELEGTSQNKRQRCSYS------SSSEVENGY 435
           ++ +V+   +E   +S  + E        E +   +  ++RC YS      S+S+V NG+
Sbjct: 442 EDEEVE-GRVE---TSEADHE--------EEDDGYERSQKRCKYSFEEEHCSTSDV-NGF 488

Query: 436 RCS--RNWDRLRCLSLWIGVCDLLTPLPMAGLEDCPNLEEIRIRVEGDCKGKPEQPESGF 493
            CS  R W++L  LSLWI V + LTPLPM GL+DCPNLEEIRI++EGDC+GK    E  F
Sbjct: 489 -CSEDRVWEKLEYLSLWINVGEFLTPLPMTGLDDCPNLEEIRIKIEGDCRGKRRPAEPEF 547

Query: 494 GL 495
           GL
Sbjct: 548 GL 549


>AT5G01720.1 | Symbols:  | RNI-like superfamily protein |
           chr5:267118-270391 REVERSE LENGTH=665
          Length = 665

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 9/136 (6%)

Query: 240 VCKNVRDSCFLLEVLGTKCPKLRVLQL-RQFQWICLAIWSQLHGVALCQGLQSLSISNCA 298
           +C N+ D    L  +G  C  LR L L R      + I +   G   C  L++++IS C 
Sbjct: 440 ICLNITDKG--LSYIGMGCSNLRELDLYRSVGITDVGISTIAQG---CIHLETINISYCQ 494

Query: 299 DLTDKGLIVIARGCSRLVKFHVQGCKGITEKGLKALACLLRRTLTDVKISCCLNLDASAC 358
           D+TDK L+ +++ CS L  F  +GC  IT +GL A+A   +R L  V +  C +++  A 
Sbjct: 495 DITDKSLVSLSK-CSLLQTFESRGCPNITSQGLAAIAVRCKR-LAKVDLKKCPSIN-DAG 551

Query: 359 LRALEPIRGRVERLHV 374
           L AL      +++++V
Sbjct: 552 LLALAHFSQNLKQINV 567


>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
           chr2:10848018-10850275 REVERSE LENGTH=628
          Length = 628

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 28/186 (15%)

Query: 152 ITRACPNLEHLLL-ACTFDPKHSGYVGDETLLAIASNCPKLTLLHLGDTASLSNLRGDPE 210
           I ++CPNL  L L AC+        +GDE LLAIA +C KL  + + +   +        
Sbjct: 224 IAKSCPNLTELTLEACS-------RIGDEGLLAIARSCSKLKSVSIKNCPLV-------R 269

Query: 211 DTGVDARISGAAMVEFFCGLPLLEELVLDVCKNVRDSCFLLEVLGTKCPKLRVLQLRQFQ 270
           D G+ + +S        C L  L+  +L    NV D    L V+G     +  L L    
Sbjct: 270 DQGIASLLSNTT-----CSLAKLKLQML----NVTD--VSLAVVGHYGLSITDLVLAGLS 318

Query: 271 WIC-LAIWSQLHGVALCQGLQSLSISNCADLTDKGLIVIARGCSRLVKFHVQGCKGITEK 329
            +     W   +GV L Q L SL+I+ C  +TD GL  + +GC  + K  +     +++ 
Sbjct: 319 HVSEKGFWVMGNGVGL-QKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDN 377

Query: 330 GLKALA 335
           GL + A
Sbjct: 378 GLVSFA 383



 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 69/254 (27%)

Query: 130 MRRLNLLTASLKEGIKSVEIQDITRACPNLEHLLLACTFDPKHSGYVGDETLLAIASNCP 189
           +++LN LT +  +G+  + ++ + + CPN++  +++       S  + D  L++ A    
Sbjct: 334 LQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIIS------KSPLLSDNGLVSFAK--- 384

Query: 190 KLTLLHLGDTASLSNLRGDPEDTGVDARISGAAMVEFFCGLPLLEELVLDVCKNVRDSCF 249
                     ASLS                             LE L L+ C  V    F
Sbjct: 385 ----------ASLS-----------------------------LESLQLEECHRVTQFGF 405

Query: 250 LLEVLGTKCPKLRVLQLRQFQWI-CLAIWSQLHGV---ALCQGLQSLSISNCADLTDKGL 305
              +L   C +    +L+ F  + CL+I     G+   + C  L+SLSI NC    D  L
Sbjct: 406 FGSLL--NCGE----KLKAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPGFGDANL 459

Query: 306 IVIARGCSRLVKFHVQGCKGITEKGLKALACLLRRTLTDVKISCCLNLDASACLRALEPI 365
             I + C +L    + G KGITE G      L++ +L  +  S C NL      R +  I
Sbjct: 460 AAIGKLCPQLEDIDLCGLKGITESGFLH---LIQSSLVKINFSGCSNLTD----RVISAI 512

Query: 366 RGR----VERLHVD 375
             R    +E L++D
Sbjct: 513 TARNGWTLEVLNID 526


>AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr4:8845927-8848701 FORWARD LENGTH=610
          Length = 610

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 43/247 (17%)

Query: 93  LFEHCRSLTSLDLSSFYDWSTWNLLSALKSNPVTTASMRRLNLLTASLKEGIKSVEIQDI 152
           L + C SL SLDL   Y          L +       +  LNL      EG+  V + D+
Sbjct: 161 LAQKCTSLKSLDLQGCYVGD-----QGLAAVGKFCKQLEELNL---RFCEGLTDVGVIDL 212

Query: 153 TRAC-PNLEHLLLACTFDPKHSGYVGDETLLAIASNCPKLTLLHLGDTASLSNLRGDPED 211
              C  +L+ + +A       S  + D +L A+ S+C  L +L+L           D E 
Sbjct: 213 VVGCSKSLKSIGVAA------SAKITDLSLEAVGSHCKLLEVLYL-----------DSE- 254

Query: 212 TGVDARISGAAMVEFFCGLPLLEELVLDVCKNVRDSCFLLEVLGTKCPKLRVLQLRQFQW 271
                 I    ++    G   L+ L L  C +V D  F    +G  C  L  L L  FQ 
Sbjct: 255 -----YIHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAF--AAVGELCTSLERLALYSFQH 306

Query: 272 ICLAIWSQLHGVALCQG---LQSLSISNCADLTDKGLIVIARGCSRLVKFHVQGCKGITE 328
                ++     A+ +G   L+ L++S+C  ++ KGL  IA GC  L +  + GC  I  
Sbjct: 307 -----FTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGT 361

Query: 329 KGLKALA 335
           +G++A+ 
Sbjct: 362 RGIEAIG 368



 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 52/272 (19%)

Query: 86  SESEFDGLFEHCRSLTSLDLSSFYDWSTWNL---------LSALKSNPVTTASMRRLNLL 136
           ++  F  + E C SL  L L SF  ++   +         L  L  +     S + L  +
Sbjct: 282 TDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAI 341

Query: 137 TASLKE----------GIKSVEIQDITRACPNLEHL-LLACTFDPKHSGYVGDETLLAIA 185
               KE           I +  I+ I ++CP L+ L LL C         +G+  L  I 
Sbjct: 342 AHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQ-------RIGNSALQEIG 394

Query: 186 SNCPKLTLLHLGDTASLSNLRGDPEDTGVDARISGAAMVEFFCGLPLLEELVLDVCKNVR 245
             C  L +LHL D + + ++                AM     G   L++L +  C  + 
Sbjct: 395 KGCKSLEILHLVDCSGIGDI----------------AMCSIAKGCRNLKKLHIRRCYEIG 438

Query: 246 DSCFLLEVLGTKCPKLRVLQLRQFQWICLAIWSQLHGVALCQG--LQSLSISNCADLTDK 303
           +   +   +G  C  L  L LR     C  + ++   +A+ +G  LQ L++S C  ++D 
Sbjct: 439 NKGII--SIGKHCKSLTELSLR----FCDKVGNKAL-IAIGKGCSLQQLNVSGCNQISDA 491

Query: 304 GLIVIARGCSRLVKFHVQGCKGITEKGLKALA 335
           G+  IARGC +L    +   + I +  L  L 
Sbjct: 492 GITAIARGCPQLTHLDISVLQNIGDMPLAELG 523


>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
           chr1:7497479-7499386 FORWARD LENGTH=360
          Length = 360

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 39/240 (16%)

Query: 100 LTSLDLSSFYDWSTWNLLSALKSNPVTTASMRRLNLLTASLKEGIKSVEIQDITRACPNL 159
           LT L LS    W   N+ S + S       ++ LNL     K  ++   ++ I   C  L
Sbjct: 66  LTRLRLS----WCNNNMNSLVLSLVPKFVKLQTLNLRQD--KPQLEDNAVEAIANHCHEL 119

Query: 160 EHLLLACTFDPKHSGYVGDETLLAIASNCPKLTLLHLGDTASLSNLRGDPEDTGVDARIS 219
           + L      D   S  + D +L A+A  CP LT L+L    S S       DT +     
Sbjct: 120 QEL------DLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFS-------DTAI----- 161

Query: 220 GAAMVEFFCGLPLLEELVLDVC---KNVRDSCFLLEVLGTKCPKLRVLQLRQFQWICL-A 275
             A +  FC     +  VL++C   K V D+   LE +G  C +++ L L   + I    
Sbjct: 162 --AYLTRFCR----KLKVLNLCGCVKAVTDNA--LEAIGNNCNQMQSLNLGWCENISDDG 213

Query: 276 IWSQLHGVALCQGLQSLSISNCADLTDKGLIVIARGCSRLVKFHVQGCKGITEKGLKALA 335
           + S  +G   C  L++L +  C  +TD+ ++ +A  C  L    +  C+ IT++ + +LA
Sbjct: 214 VMSLAYG---CPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLA 270


>AT1G80570.1 | Symbols:  | RNI-like superfamily protein |
           chr1:30290828-30292231 FORWARD LENGTH=467
          Length = 467

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 32/218 (14%)

Query: 125 VTTASMRRLNLLTASLKEGIKSVEIQDITRACPNLEHLLLACTFDPKHSGYVGDETLLAI 184
           V T +   L  LT S    I  V I  ++ +CP L  L L   F P+ +G      +L++
Sbjct: 91  VLTTNCHSLTDLTLSFCTFITDVGIGHLS-SCPELSSLKL--NFAPRITGC----GVLSL 143

Query: 185 ASNCPKLTLLHLGDTASLSNLRGDPEDTGVDARISGAAMVEFFCGLPLLEELVLDVCKNV 244
           A  C KL  LHL    +                ++    +E+F  L  LEEL +  C+ +
Sbjct: 144 AVGCKKLRRLHLIRCLN----------------VASVEWLEYFGKLETLEELCIKNCRAI 187

Query: 245 RDSCFLLEVLGTKCPKLRVLQLR-QFQWICLAIWSQL------HGVALCQGLQSLSISNC 297
            +   +   L     KL  LQ      +  + ++ QL        +  C  L  LS+ NC
Sbjct: 188 GEGDLI--KLRNSWRKLTSLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNC 245

Query: 298 ADLTDKGLIVIARGCSRLVKFHVQGCKGITEKGLKALA 335
                +GL  + R C  L K H+  C G+++  + AL 
Sbjct: 246 IIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDIIALV 283


>AT1G80570.3 | Symbols:  | RNI-like superfamily protein |
           chr1:30290828-30292231 FORWARD LENGTH=467
          Length = 467

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 32/218 (14%)

Query: 125 VTTASMRRLNLLTASLKEGIKSVEIQDITRACPNLEHLLLACTFDPKHSGYVGDETLLAI 184
           V T +   L  LT S    I  V I  ++ +CP L  L L   F P+ +G      +L++
Sbjct: 91  VLTTNCHSLTDLTLSFCTFITDVGIGHLS-SCPELSSLKL--NFAPRITGC----GVLSL 143

Query: 185 ASNCPKLTLLHLGDTASLSNLRGDPEDTGVDARISGAAMVEFFCGLPLLEELVLDVCKNV 244
           A  C KL  LHL    +                ++    +E+F  L  LEEL +  C+ +
Sbjct: 144 AVGCKKLRRLHLIRCLN----------------VASVEWLEYFGKLETLEELCIKNCRAI 187

Query: 245 RDSCFLLEVLGTKCPKLRVLQLR-QFQWICLAIWSQL------HGVALCQGLQSLSISNC 297
            +   +   L     KL  LQ      +  + ++ QL        +  C  L  LS+ NC
Sbjct: 188 GEGDLI--KLRNSWRKLTSLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNC 245

Query: 298 ADLTDKGLIVIARGCSRLVKFHVQGCKGITEKGLKALA 335
                +GL  + R C  L K H+  C G+++  + AL 
Sbjct: 246 IIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDIIALV 283