Miyakogusa Predicted Gene
- Lj0g3v0059669.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0059669.1 Non Chatacterized Hit- tr|I1HZ89|I1HZ89_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,28.15,1e-18,no
description,Bromodomain; BROMODOMAIN_2,Bromodomain;
BROMODOMAIN-CONTAINING PROTEIN,NULL; FALZ-REL,CUFF.2667.1
(410 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G34900.1 | Symbols: GTE01, IMB1, GTE1 | Transcription factor ... 277 1e-74
AT2G34900.2 | Symbols: IMB1 | Transcription factor GTE6 | chr2:1... 255 5e-68
AT3G52280.1 | Symbols: GTE6 | general transcription factor group... 239 3e-63
AT3G52280.2 | Symbols: GTE6 | general transcription factor group... 234 7e-62
AT1G73150.1 | Symbols: GTE3 | global transcription factor group ... 93 3e-19
AT1G06230.3 | Symbols: GTE4 | global transcription factor group ... 88 9e-18
AT1G06230.2 | Symbols: GTE4 | global transcription factor group ... 88 9e-18
AT1G06230.1 | Symbols: GTE4 | global transcription factor group ... 88 9e-18
AT5G10550.1 | Symbols: GTE2 | global transcription factor group ... 86 4e-17
AT5G65630.1 | Symbols: GTE7 | global transcription factor group ... 80 2e-15
AT5G14270.2 | Symbols: BET9 | bromodomain and extraterminal doma... 79 5e-15
AT5G14270.1 | Symbols: ATBET9, BET9 | bromodomain and extratermi... 79 6e-15
AT1G17790.1 | Symbols: | DNA-binding bromodomain-containing pro... 79 7e-15
AT3G27260.1 | Symbols: GTE8 | global transcription factor group ... 77 2e-14
AT3G27260.2 | Symbols: GTE8 | global transcription factor group ... 77 3e-14
AT5G63320.3 | Symbols: NPX1 | nuclear protein X1 | chr5:25377180... 75 7e-14
AT5G63320.2 | Symbols: NPX1 | nuclear protein X1 | chr5:25377180... 75 7e-14
AT5G46550.1 | Symbols: | DNA-binding bromodomain-containing pro... 74 2e-13
AT5G63320.1 | Symbols: NPX1 | nuclear protein X1 | chr5:25374413... 72 6e-13
AT3G01770.1 | Symbols: ATBET10, BET10 | bromodomain and extrater... 72 7e-13
AT5G55040.2 | Symbols: | DNA-binding bromodomain-containing pro... 67 2e-11
AT5G55040.1 | Symbols: | DNA-binding bromodomain-containing pro... 67 2e-11
AT1G58025.2 | Symbols: | DNA-binding bromodomain-containing pro... 62 6e-10
AT1G58025.3 | Symbols: | DNA-binding bromodomain-containing pro... 62 6e-10
AT1G58025.1 | Symbols: | DNA-binding bromodomain-containing pro... 62 6e-10
AT1G76380.2 | Symbols: | DNA-binding bromodomain-containing pro... 59 6e-09
AT1G76380.1 | Symbols: | DNA-binding bromodomain-containing pro... 59 6e-09
AT1G76380.3 | Symbols: | DNA-binding bromodomain-containing pro... 58 2e-08
AT1G20670.1 | Symbols: | DNA-binding bromodomain-containing pro... 57 2e-08
>AT2G34900.1 | Symbols: GTE01, IMB1, GTE1 | Transcription factor
GTE6 | chr2:14723333-14725562 REVERSE LENGTH=386
Length = 386
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/345 (44%), Positives = 215/345 (62%), Gaps = 23/345 (6%)
Query: 82 EENLNRYRHFVNEILTKVQRLEKQVNEVEQFYNPTDGV-QVNHYKGRGMHLSGTKKSILQ 140
E L + V+EI +V +LE++V EVE FY+ DG Q N K G K +I Q
Sbjct: 30 ESELENFGTCVDEITDRVNQLEQKVVEVEHFYSTKDGAAQTNTSKSNS---GGKKIAISQ 86
Query: 141 GGSSR-----------EVLGMQELMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYE 189
+S+ + + +LM +F T+ +I Q +WA PFLEPVDVKGL L+DYY+
Sbjct: 87 PNNSKGNSAGKEKSKGKHVSSPDLMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYK 146
Query: 190 IIEKPMDFSTIRRKMDAKDGSGYKNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEK 249
+IEKPMD TI++KM++ S Y NVREIY+DVRL+FKNAM+YN+ K D++VMA++LLEK
Sbjct: 147 VIEKPMDLGTIKKKMES---SEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEK 203
Query: 250 FEKKWLQLLPK---XXXXXXXXXXXXXXNAHIAQEANCANMAREISFELGEVDTDLKNLK 306
FE+KWL ++PK N + EA A MAR++S EL E+D L+ L+
Sbjct: 204 FEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLR 263
Query: 307 AMVIENCRKLSAQEKVTLGTALTKLSHENLMRAMQIISENNPNFQPDVEEVNLDIDAQSD 366
V++ CRKLS QEK L AL +LS E+L +A++++SE+NP+F EV LDID Q+D
Sbjct: 264 ESVVQRCRKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTD 323
Query: 367 YTLWRLNIFAKSALEVQGRTHADTVA--NHNSNVEEEERSNKRRR 409
TLWRL +F + AL+ ++ T A N+N+ E ++N +RR
Sbjct: 324 VTLWRLKVFVQEALKAANKSSGGTNAQNNNNTGTGEINKNNAKRR 368
>AT2G34900.2 | Symbols: IMB1 | Transcription factor GTE6 |
chr2:14723333-14724800 REVERSE LENGTH=276
Length = 276
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/261 (48%), Positives = 177/261 (67%), Gaps = 8/261 (3%)
Query: 154 MHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYK 213
M +F T+ +I Q +WA PFLEPVDVKGL L+DYY++IEKPMD TI++KM++ S Y
Sbjct: 1 MRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMES---SEYS 57
Query: 214 NVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQLLPKXXXXXXXXXXXXX 273
NVREIY+DVRL+FKNAM+YN+ K D++VMA++LLEKFE+KWL ++PK
Sbjct: 58 NVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEA 117
Query: 274 ---XNAHIAQEANCANMAREISFELGEVDTDLKNLKAMVIENCRKLSAQEKVTLGTALTK 330
N + EA A MAR++S EL E+D L+ L+ V++ CRKLS QEK L AL +
Sbjct: 118 EKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGR 177
Query: 331 LSHENLMRAMQIISENNPNFQPDVEEVNLDIDAQSDYTLWRLNIFAKSALEVQGRTHADT 390
LS E+L +A++++SE+NP+F EV LDID Q+D TLWRL +F + AL+ ++ T
Sbjct: 178 LSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKSSGGT 237
Query: 391 VA--NHNSNVEEEERSNKRRR 409
A N+N+ E ++N +RR
Sbjct: 238 NAQNNNNTGTGEINKNNAKRR 258
>AT3G52280.1 | Symbols: GTE6 | general transcription factor group E6
| chr3:19389103-19391289 REVERSE LENGTH=369
Length = 369
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 206/344 (59%), Gaps = 27/344 (7%)
Query: 92 VNEILTKVQRLEKQVNEVEQFYNPTDGVQVNHYKGR----GMHLSGTKKSILQGGSSREV 147
V+E+L V LE ++ EVE+FY+ GV + G+ G H+ G +K I Q + RE
Sbjct: 28 VDEVLQWVDSLEHKLKEVEEFYSSI-GVSNSGSIGKDTEKGRHVVGIRK-IQQEAARREA 85
Query: 148 LG---MQELMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKM 204
+ MQ+LM +F TI +ITQ + A PF+ PV+V+GL L+DY+E+I+KPMDFSTI+ +M
Sbjct: 86 VAAKRMQDLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQM 145
Query: 205 DAKDGSGYKNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQLLPKXXXX 264
+AKDG+GYK+V +IY+D+RL+F+NAM YN+ D++ MAK LLEKFE+KW LPK
Sbjct: 146 EAKDGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEE 205
Query: 265 XXXXXXXXXXNAH---IAQEANCANMAREISFELGEVDTDLKNLKAMVIENCRKLSAQEK 321
A +A+EA+ RE+ E+ + +L+ L V+E CRK++ +EK
Sbjct: 206 EKIREEEEKQAAKEALLAKEASHIKTTRELGNEICHANDELEKLMRKVVERCRKITIEEK 265
Query: 322 VTLGTALTKLSHENLMRAMQIISENNPNFQPDVEEVNLDIDAQSDYTLWRLNIFAKSAL- 380
+G AL KLS ++L + + I+++ NP+FQP EEV++++D + TLWRL F K AL
Sbjct: 266 RNIGLALLKLSPDDLQKVLGIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKDALD 325
Query: 381 --------------EVQGRTHADTVANHNSNVEEEERSNKRRRV 410
E+ G + N+ + ER KR R+
Sbjct: 326 NAMKKKKEEETKTRELSGAQKKEVSKKRNATTKLAERKTKRSRI 369
>AT3G52280.2 | Symbols: GTE6 | general transcription factor group E6
| chr3:19389103-19391289 REVERSE LENGTH=386
Length = 386
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 204/341 (59%), Gaps = 27/341 (7%)
Query: 95 ILTKVQRLEKQVNEVEQFYNPTDGVQVNHYKGR----GMHLSGTKKSILQGGSSREVLG- 149
+L + + LE ++ EVE+FY+ GV + G+ G H+ G +K I Q + RE +
Sbjct: 48 VLHRYELLEHKLKEVEEFYSSI-GVSNSGSIGKDTEKGRHVVGIRK-IQQEAARREAVAA 105
Query: 150 --MQELMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAK 207
MQ+LM +F TI +ITQ + A PF+ PV+V+GL L+DY+E+I+KPMDFSTI+ +M+AK
Sbjct: 106 KRMQDLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAK 165
Query: 208 DGSGYKNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQLLPKXXXXXXX 267
DG+GYK+V +IY+D+RL+F+NAM YN+ D++ MAK LLEKFE+KW LPK
Sbjct: 166 DGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKI 225
Query: 268 XXXXXXXNAH---IAQEANCANMAREISFELGEVDTDLKNLKAMVIENCRKLSAQEKVTL 324
A +A+EA+ RE+ E+ + +L+ L V+E CRK++ +EK +
Sbjct: 226 REEEEKQAAKEALLAKEASHIKTTRELGNEICHANDELEKLMRKVVERCRKITIEEKRNI 285
Query: 325 GTALTKLSHENLMRAMQIISENNPNFQPDVEEVNLDIDAQSDYTLWRLNIFAKSAL---- 380
G AL KLS ++L + + I+++ NP+FQP EEV++++D + TLWRL F K AL
Sbjct: 286 GLALLKLSPDDLQKVLGIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKDALDNAM 345
Query: 381 -----------EVQGRTHADTVANHNSNVEEEERSNKRRRV 410
E+ G + N+ + ER KR R+
Sbjct: 346 KKKKEEETKTRELSGAQKKEVSKKRNATTKLAERKTKRSRI 386
>AT1G73150.1 | Symbols: GTE3 | global transcription factor group E3
| chr1:27504327-27505996 REVERSE LENGTH=461
Length = 461
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 142/332 (42%), Gaps = 46/332 (13%)
Query: 75 ASCSNVTEENLNR-YRHFVNEILTKVQRLEKQVNEVEQFYNPTDGVQVNHYKGRGMHLSG 133
+S S + NL R + + E+ + ++RLE Q N + P ++ +G
Sbjct: 53 SSISKLEVRNLKRKLQAELEEVRSLIKRLEPQGNN----FAPVPNKKLKTA-------NG 101
Query: 134 TKKSILQGGSSREVLGMQELMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEK 193
KK + G ++ + G +++ +L ++ + + F PVDV L L+DY+ II++
Sbjct: 102 GKKGGVHGAAADK--GTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKE 159
Query: 194 PMDFSTIRRKMDAKDGSGYKNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKK 253
PMD T++ ++ S YK+ E DVRL F NAM YN HD++ MA+ LL FE+K
Sbjct: 160 PMDLGTVKTRLSK---SLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEK 216
Query: 254 WLQLLPKXXXXXXXXXXXXXXNAHIAQEANCAN--------------------MAREISF 293
W+ L + + H N N + +
Sbjct: 217 WVPLETQYELLIRKQQPVRDIDFHAPVSTNTHNVEALPLPAPTPSLSPPPPPKVVENRTL 276
Query: 294 ELGEVDTD------LKNLKAMVIENC---RKLSAQEKVTLGTALTKLSHENLMRAMQIIS 344
E E T+ L + ++E R L+ EK L L L ++ L +QII
Sbjct: 277 ERAESMTNPVKPAVLPVVPEKLVEEASANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIK 336
Query: 345 ENNPNFQPDVEEVNLDIDAQSDYTLWRLNIFA 376
+ P +E+ LDID+ TLW L F
Sbjct: 337 KRTPELSQQDDEIELDIDSLDLETLWELFRFV 368
>AT1G06230.3 | Symbols: GTE4 | global transcription factor group E4
| chr1:1907626-1910183 FORWARD LENGTH=766
Length = 766
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 173 FLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIYSDVRLIFKNAMKY 232
F PVDVKGL L DYY IIE PMD TI+ + + YK+ RE DVRL F NAM Y
Sbjct: 441 FNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMK---NLYKSPREFAEDVRLTFHNAMTY 497
Query: 233 NDRKHDIHVMAKNLLEKFEKKW 254
N D+H+MA LL+ FE++W
Sbjct: 498 NPEGQDVHLMAVTLLQIFEERW 519
>AT1G06230.2 | Symbols: GTE4 | global transcription factor group E4
| chr1:1907626-1910183 FORWARD LENGTH=766
Length = 766
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 173 FLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIYSDVRLIFKNAMKY 232
F PVDVKGL L DYY IIE PMD TI+ + + YK+ RE DVRL F NAM Y
Sbjct: 441 FNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMK---NLYKSPREFAEDVRLTFHNAMTY 497
Query: 233 NDRKHDIHVMAKNLLEKFEKKW 254
N D+H+MA LL+ FE++W
Sbjct: 498 NPEGQDVHLMAVTLLQIFEERW 519
>AT1G06230.1 | Symbols: GTE4 | global transcription factor group E4
| chr1:1907626-1910183 FORWARD LENGTH=766
Length = 766
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 173 FLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIYSDVRLIFKNAMKY 232
F PVDVKGL L DYY IIE PMD TI+ + + YK+ RE DVRL F NAM Y
Sbjct: 441 FNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMK---NLYKSPREFAEDVRLTFHNAMTY 497
Query: 233 NDRKHDIHVMAKNLLEKFEKKW 254
N D+H+MA LL+ FE++W
Sbjct: 498 NPEGQDVHLMAVTLLQIFEERW 519
>AT5G10550.1 | Symbols: GTE2 | global transcription factor group E2
| chr5:3332855-3335232 REVERSE LENGTH=678
Length = 678
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 150 MQELMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDG 209
++ +M IL ++ + +W+ FL PVDV GL L+DY+ I++KPMD T+ KM+ + G
Sbjct: 246 LKSMMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTV--KMNLEKG 303
Query: 210 SGYKNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFE 251
Y++ + SDVRL F NAM YN + D+++MA+ LL +F+
Sbjct: 304 L-YRSPIDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFD 344
>AT5G65630.1 | Symbols: GTE7 | global transcription factor group E7
| chr5:26226311-26228257 REVERSE LENGTH=590
Length = 590
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 26/200 (13%)
Query: 72 NFGASCSNVTEENLNRYRHFVNEILTKVQRLEKQVNEVEQFYNPTD-----GVQVNHYKG 126
N S+ E R+ + +I +R+E E +Q Y + +N++ G
Sbjct: 71 NLAGYTSSQLRELKKRFTSELKQIRILRERIESGTFETQQGYTIPEVPAVRSAPLNNFTG 130
Query: 127 R-----------GMHLSGTKKSILQGGSSRE----VLGMQELMHRFETILDEITQDRWAE 171
++SG K+S G S E + GM ++ IL ++ + +WA
Sbjct: 131 EKNDLGPKKKKQKKNVSGLKRSNQFGPSDPESEKLLAGM---LNTCSQILVKLMKHKWAW 187
Query: 172 PFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIYSDVRLIFKNAMK 231
F PVDV GL L+DY+++++KPMD T++ +D Y + + +DVRL F NAM
Sbjct: 188 VFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDK---GFYVSPIDFATDVRLTFDNAMT 244
Query: 232 YNDRKHDIHVMAKNLLEKFE 251
YN + D++ MA LL+ F+
Sbjct: 245 YNPKGQDVYFMADKLLDHFD 264
>AT5G14270.2 | Symbols: BET9 | bromodomain and extraterminal domain
protein 9 | chr5:4605173-4608517 FORWARD LENGTH=689
Length = 689
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 153 LMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGY 212
LM + E +L + ++ F PVDV L++ DY+ +IE PMD T++ K+ + Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTS---GTY 193
Query: 213 KNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQL 257
E +DVRL F NAM YN +D++VMA L + FE +W L
Sbjct: 194 SCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTL 238
>AT5G14270.1 | Symbols: ATBET9, BET9 | bromodomain and extraterminal
domain protein 9 | chr5:4605173-4608517 FORWARD
LENGTH=688
Length = 688
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 153 LMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGY 212
LM + E +L + ++ F PVDV L++ DY+ +IE PMD T++ K+ + Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTS---GTY 193
Query: 213 KNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQL 257
E +DVRL F NAM YN +D++VMA L + FE +W L
Sbjct: 194 SCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTL 238
>AT1G17790.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:6125532-6127276 REVERSE LENGTH=487
Length = 487
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 20/188 (10%)
Query: 75 ASCSNVTEENLNR-YRHFVNEILTKVQRLEKQVNEVEQFYNPTDGVQVNHYKGRGMHL-- 131
+S S + NL R + ++E+ + ++R + + N P + + GR +
Sbjct: 61 SSISKLEVRNLKRKLKSELDEVRSLIKRFDPEAN-------PGGSMAKSGVVGRSKKVKT 113
Query: 132 --SGTKKSILQGGSSREVLGMQELMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYE 189
G KKS G+ + G ++ ++L ++ + + A F PVD KGL L+DY+
Sbjct: 114 GNGGGKKS--GHGADK---GTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHN 168
Query: 190 IIEKPMDFSTIRRKMDAKDGSGYKNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEK 249
I+++PMD T++ K+ S YK+ + DVRL F NA+ YN HD++ A+ LL
Sbjct: 169 IVKEPMDLGTVKTKLGK---SLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNM 225
Query: 250 FEKKWLQL 257
FE KW+ +
Sbjct: 226 FEDKWVSI 233
>AT3G27260.1 | Symbols: GTE8 | global transcription factor group E8
| chr3:10068411-10072403 FORWARD LENGTH=813
Length = 813
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 13/107 (12%)
Query: 153 LMHRFETILDEITQDRWAEP----FLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKD 208
LM + +T+L ++ W+ P F PVDV L++ DY I+ PMD T+++ +
Sbjct: 176 LMKQCDTLLRKL----WSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL---- 227
Query: 209 GSG-YKNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKW 254
SG Y + E +DVRL F NAM YN HD+H+M L + FE +W
Sbjct: 228 ASGVYSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARW 274
>AT3G27260.2 | Symbols: GTE8 | global transcription factor group E8
| chr3:10068558-10072403 FORWARD LENGTH=764
Length = 764
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 13/107 (12%)
Query: 153 LMHRFETILDEITQDRWAEP----FLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKD 208
LM + +T+L ++ W+ P F PVDV L++ DY I+ PMD T+++ +
Sbjct: 127 LMKQCDTLLRKL----WSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL---- 178
Query: 209 GSG-YKNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKW 254
SG Y + E +DVRL F NAM YN HD+H+M L + FE +W
Sbjct: 179 ASGVYSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARW 225
>AT5G63320.3 | Symbols: NPX1 | nuclear protein X1 |
chr5:25377180-25378783 REVERSE LENGTH=477
Length = 477
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 27/227 (11%)
Query: 153 LMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGY 212
+M ET+L+ + + PF PVD L++ DY+ +I+ PMD TIR ++ + Y
Sbjct: 161 VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGE---Y 217
Query: 213 KNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQLLPKXXXXXXXXXXXX 272
+ + +DVRL F N++ YN + H MA+ + + FE W + K
Sbjct: 218 SSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKK----------IP 267
Query: 273 XXNAHIAQEANCANMAREISFELGEV--------DTDLKNLKAMVIENCRKLSAQEKVTL 324
+ + A++ EI FE+ + D L+ A ++ ++ EK L
Sbjct: 268 MSKPPVIPLTSSASLESEIPFEVAPMRKKEAAMNDNKLRVEPAKLV-----MTDGEKKKL 322
Query: 325 GTALTKLSHENLMRAMQIISE-NNPNFQPDVEEVNLDIDAQSDYTLW 370
G L L + + ++ E + + Q E+ +DI+A SD L+
Sbjct: 323 GQDLMALEEDFPQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILF 369
>AT5G63320.2 | Symbols: NPX1 | nuclear protein X1 |
chr5:25377180-25378783 REVERSE LENGTH=477
Length = 477
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 27/227 (11%)
Query: 153 LMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGY 212
+M ET+L+ + + PF PVD L++ DY+ +I+ PMD TIR ++ + Y
Sbjct: 161 VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGE---Y 217
Query: 213 KNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQLLPKXXXXXXXXXXXX 272
+ + +DVRL F N++ YN + H MA+ + + FE W + K
Sbjct: 218 SSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKK----------IP 267
Query: 273 XXNAHIAQEANCANMAREISFELGEV--------DTDLKNLKAMVIENCRKLSAQEKVTL 324
+ + A++ EI FE+ + D L+ A ++ ++ EK L
Sbjct: 268 MSKPPVIPLTSSASLESEIPFEVAPMRKKEAAMNDNKLRVEPAKLV-----MTDGEKKKL 322
Query: 325 GTALTKLSHENLMRAMQIISE-NNPNFQPDVEEVNLDIDAQSDYTLW 370
G L L + + ++ E + + Q E+ +DI+A SD L+
Sbjct: 323 GQDLMALEEDFPQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILF 369
>AT5G46550.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr5:18884439-18886503 REVERSE LENGTH=494
Length = 494
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 173 FLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIYSDVRLIFKNAMKY 232
F EPVD +++ DY+ +I+KPMD T++ K+ + Y N E +DVRL F NAM Y
Sbjct: 89 FKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLK---NVYSNADEFAADVRLTFANAMHY 145
Query: 233 NDRKHDIHVMAKNLLEKFEKKWLQLLPK 260
N +++H +AK + E FE +W L+ K
Sbjct: 146 NPLWNEVHTIAKEINEIFEVRWESLMKK 173
>AT5G63320.1 | Symbols: NPX1 | nuclear protein X1 |
chr5:25374413-25378783 REVERSE LENGTH=1061
Length = 1061
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 27/227 (11%)
Query: 153 LMHRFETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGY 212
+M ET+L+ + + PF PVD L++ DY+ +I+ PMD TIR ++ + Y
Sbjct: 161 VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGE---Y 217
Query: 213 KNVREIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQLLPKXXXXXXXXXXXX 272
+ + +DVRL F N++ YN + H MA+ + + FE W + K
Sbjct: 218 SSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKK----------IP 267
Query: 273 XXNAHIAQEANCANMAREISFELGEV--------DTDLKNLKAMVIENCRKLSAQEKVTL 324
+ + A++ EI FE+ + D L+ A ++ ++ EK L
Sbjct: 268 MSKPPVIPLTSSASLESEIPFEVAPMRKKEAAMNDNKLRVEPAKLV-----MTDGEKKKL 322
Query: 325 GTALTKLSHENLMRAMQIISE-NNPNFQPDVEEVNLDIDAQSDYTLW 370
G L L + + ++ E + + Q E+ +DI+A SD L+
Sbjct: 323 GQDLMALEEDFPQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILF 369
>AT3G01770.1 | Symbols: ATBET10, BET10 | bromodomain and
extraterminal domain protein 10 | chr3:275582-278386
REVERSE LENGTH=620
Length = 620
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 71 PNFGASCSNVTEENLNRYRHFVNEILTKVQRLEKQVNE---VEQFYNPTDGVQVNHYKGR 127
P S+++ ++ H + + L +++ +K V + + + T V+ K
Sbjct: 39 PRIVLPLSDLSSSERRKWIHTLRQELEQLRSFQKSVGDLLPISKIVTSTPASNVSRPKSF 98
Query: 128 GMHL--SGTKKSILQGGSSREVLGMQELMHRF---ETILDEITQDRWAEPFLEPVDVKGL 182
GM +G K +L +++ M R E++L + + F PVDV L
Sbjct: 99 GMSRCSTGPGKRVLPFTATKPEPVTTSTMLRMKQCESLLKRLMSQQHCWLFNTPVDVVKL 158
Query: 183 DLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIYSDVRLIFKNAMKYNDRKHDIHVM 242
++ DY+ II+ PMD T++ K+ + Y + E +DVRL F+NAM YN ++++
Sbjct: 159 NIPDYFTIIKHPMDLGTVKSKLTS---GTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRF 215
Query: 243 AKNLLEKFEKKW 254
A L + FE +W
Sbjct: 216 ADTLSKFFEVRW 227
>AT5G55040.2 | Symbols: | DNA-binding bromodomain-containing
protein | chr5:22327727-22331703 REVERSE LENGTH=916
Length = 916
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 9/105 (8%)
Query: 157 FETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVR 216
E ILD++ + + EPVD + +L DY+++IE PMDFST+R+K+ +GS Y +
Sbjct: 191 LELILDKLQKKDIYGVYAEPVDPE--ELPDYHDMIEHPMDFSTVRKKL--ANGS-YSTLE 245
Query: 217 EIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLE----KFEKKWLQL 257
E+ SDV LI NAM+YN + A+ + E KFEK L++
Sbjct: 246 ELESDVLLICSNAMQYNSSDTVYYKQARTIQEMGKRKFEKARLKI 290
>AT5G55040.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr5:22327727-22331703 REVERSE LENGTH=916
Length = 916
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 9/105 (8%)
Query: 157 FETILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVR 216
E ILD++ + + EPVD + +L DY+++IE PMDFST+R+K+ +GS Y +
Sbjct: 191 LELILDKLQKKDIYGVYAEPVDPE--ELPDYHDMIEHPMDFSTVRKKL--ANGS-YSTLE 245
Query: 217 EIYSDVRLIFKNAMKYNDRKHDIHVMAKNLLE----KFEKKWLQL 257
E+ SDV LI NAM+YN + A+ + E KFEK L++
Sbjct: 246 ELESDVLLICSNAMQYNSSDTVYYKQARTIQEMGKRKFEKARLKI 290
>AT1G58025.2 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:21457755-21461757 REVERSE LENGTH=582
Length = 582
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 160 ILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIY 219
++ +I + A+PF PV+ + L + DY++II+ PMDF TI + G+ Y N ++Y
Sbjct: 222 VIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEK--GNKYMNSEDVY 279
Query: 220 SDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKW 254
DV I+ N KYN + I + K + + F K W
Sbjct: 280 KDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYW 314
>AT1G58025.3 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:21458219-21461757 REVERSE LENGTH=573
Length = 573
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 160 ILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIY 219
++ +I + A+PF PV+ + L + DY++II+ PMDF TI + G+ Y N ++Y
Sbjct: 222 VIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEK--GNKYMNSEDVY 279
Query: 220 SDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKW 254
DV I+ N KYN + I + K + + F K W
Sbjct: 280 KDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYW 314
>AT1G58025.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:21458219-21461757 REVERSE LENGTH=572
Length = 572
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 160 ILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIY 219
++ +I + A+PF PV+ + L + DY++II+ PMDF TI + G+ Y N ++Y
Sbjct: 222 VIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEK--GNKYMNSEDVY 279
Query: 220 SDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKW 254
DV I+ N KYN + I + K + + F K W
Sbjct: 280 KDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYW 314
>AT1G76380.2 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:28651416-28654536 REVERSE LENGTH=580
Length = 580
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 160 ILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIY 219
ILD + + + +P D + +L DYYEII+ PMDF+T+R+K+++ Y + +
Sbjct: 153 ILDRVQKKDTYGVYSDPADPE--ELPDYYEIIKNPMDFTTLRKKLES---GAYTTLEQFE 207
Query: 220 SDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQL 257
DV LI NAM+YN + A+ +LE +K + L
Sbjct: 208 QDVFLICTNAMEYNSADTVYYRQARAMLELAKKDFGNL 245
>AT1G76380.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:28651416-28654536 REVERSE LENGTH=579
Length = 579
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 160 ILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIY 219
ILD + + + +P D + +L DYYEII+ PMDF+T+R+K+++ Y + +
Sbjct: 152 ILDRVQKKDTYGVYSDPADPE--ELPDYYEIIKNPMDFTTLRKKLES---GAYTTLEQFE 206
Query: 220 SDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQL 257
DV LI NAM+YN + A+ +LE +K + L
Sbjct: 207 QDVFLICTNAMEYNSADTVYYRQARAMLELAKKDFGNL 244
>AT1G76380.3 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:28651416-28654536 REVERSE LENGTH=579
Length = 579
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 160 ILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIY 219
ILD + + + +P D + +L DYYEII+ PMDF+T+R+K+++ Y + +
Sbjct: 152 ILDRVQKKDTYGVYSDPADPE--ELPDYYEIIKNPMDFTTLRKKLES---GAYTTLEQFE 206
Query: 220 SDVRLIFKNAMKYNDRKHDIHVMAKNLLEKFEKKWLQL 257
++V LI NAM+YN + A+ +LE +K + L
Sbjct: 207 ANVFLICTNAMEYNSADTVYYRQARAMLELAKKDFGNL 244
>AT1G20670.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:7164537-7167933 REVERSE LENGTH=652
Length = 652
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 160 ILDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIY 219
ILD + + + +PVD + +L DY+EII+ PMDFST+R K+D+ Y + +
Sbjct: 183 ILDRLQKKDTYGVYSDPVDPE--ELPDYFEIIKNPMDFSTLRNKLDS---GAYSTLEQFE 237
Query: 220 SDVRLIFKNAMKYN 233
DV LI NAM+YN
Sbjct: 238 RDVFLICTNAMEYN 251