Miyakogusa Predicted Gene

Lj0g3v0059259.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0059259.1 Non Chatacterized Hit- tr|D7SP48|D7SP48_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.07,3e-17,coiled-coil,NULL,CUFF.2628.1
         (130 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36270.1 | Symbols:  | ATP binding | chr4:17161159-17164227 R...    77   2e-15
AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV 1 |...    74   4e-14
AT4G36280.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...    71   2e-13

>AT4G36270.1 | Symbols:  | ATP binding | chr4:17161159-17164227
           REVERSE LENGTH=486
          Length = 486

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 46/169 (27%)

Query: 1   MVNDYWKGHCHLVGY-------------------------QPLNFKSQNVQKETQIRQSA 35
           +V++YW  HCH+ GY                          PL   S  + +  QI +  
Sbjct: 317 IVSNYWNTHCHVFGYCTYGMPADKSKRIAIPDQPPTVNTFNPLPLPSDEISQGGQIIRDQ 376

Query: 36  GRSTNTQN--------VHQDDLYIDQ-TIAGATSTGTPGPVAVD---------KNKICEE 77
             + NT N        V Q    I + +++ ATS+      AVD          ++I EE
Sbjct: 377 PPTVNTFNPLPLPSDRVSQGGPIIREISLSNATSSRI---AAVDTENNLVGKSAHEISEE 433

Query: 78  NIQLFMKCEEFRKKETELKQTVENLEEDLKDLQRKCRQLSAFLVAKKKQ 126
           NIQLFM+CEE+ KKETEL+QTV NL ++L++ + KC +L+  + AK+++
Sbjct: 434 NIQLFMRCEEYVKKETELEQTVSNLAKELEETKSKCARLALLVDAKRRE 482


>AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV 1 |
           chr4:17169669-17173187 REVERSE LENGTH=635
          Length = 635

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 45/169 (26%)

Query: 1   MVNDYWKGHCHLVGYQPLNFKSQNVQKETQIRQSAGRSTNTQNV---------HQDDLYI 51
           + +DYW+ HCH+ GYQ     +   ++     Q    + NT N          H   +  
Sbjct: 465 ITSDYWQNHCHIFGYQTAQIPADKSKRTVIPDQPP--TVNTYNPSPLPSDRISHGGPIIR 522

Query: 52  DQTIAGATSTGTPG-------------------------PVAVDKN---------KICEE 77
           +  ++ ATS+ T                           P A D           +I EE
Sbjct: 523 EINLSNATSSRTAAVAAPHLRNYTGLRNNFQPVQLNPQPPAAGDTGNNLVGKLAAEIREE 582

Query: 78  NIQLFMKCEEFRKKETELKQTVENLEEDLKDLQRKCRQLSAFLVAKKKQ 126
           N+QLFM+CEE+ KKE E++QTV++LE++L++++ KC QL+  + AKKK+
Sbjct: 583 NLQLFMRCEEYVKKENEVEQTVKSLEKELEEIKSKCAQLALLVDAKKKE 631


>AT4G36280.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein |
           chr4:17165513-17169277 REVERSE LENGTH=626
          Length = 626

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 50/171 (29%)

Query: 1   MVNDYWKGHCHLVGY-----------------QPLNFKSQNVQKETQIRQSAG----RST 39
           +V  YW  HCHL+GY                 QP    + N       + S G    R  
Sbjct: 457 IVYSYWYSHCHLLGYHKYQMPADKSKKIAIPDQPPTISTVNPSPLPSDKISQGGPIIREI 516

Query: 40  NTQNVHQDDLYIDQTIAGAT-----STG----------TPGPVAVD---------KNKIC 75
           N  N         +T+A A+     STG           P P A D           +I 
Sbjct: 517 NLSNATSS-----RTVAFASPHLRNSTGLRSNFQPVQLNPQPTAADTGNNLDGKSAGEIR 571

Query: 76  EENIQLFMKCEEFRKKETELKQTVENLEEDLKDLQRKCRQLSAFLVAKKKQ 126
           +EN+QLFM+CEE+ KKE E +QTV++LE++L++ + KC  L+  + AKKK+
Sbjct: 572 QENLQLFMRCEEYIKKENETEQTVKSLEKELEEFKSKCAHLALLVDAKKKE 622