Miyakogusa Predicted Gene

Lj0g3v0058969.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0058969.1 Non Chatacterized Hit- tr|I1L3L8|I1L3L8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,43.14,5e-17,ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT
CLPX,Clp protease, ATP-binding subunit ClpX; HSL AND ,CUFF.2633.1
         (566 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53350.1 | Symbols: CLPX | CLP protease regulatory subunit X ...   523   e-148
AT1G33360.1 | Symbols:  | ATP-dependent Clp protease | chr1:1209...   506   e-143
AT5G49840.1 | Symbols:  | ATP-dependent Clp protease | chr5:2025...   504   e-143

>AT5G53350.1 | Symbols: CLPX | CLP protease regulatory subunit X |
           chr5:21644060-21647503 FORWARD LENGTH=579
          Length = 579

 Score =  523 bits (1346), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/373 (69%), Positives = 307/373 (82%), Gaps = 8/373 (2%)

Query: 185 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSSDQ-------DTDLVQPEK 237
           I   LN+FV+GQE+ KK+LSVAVYNHY R+   ++Q  S            D D+V+ EK
Sbjct: 164 ICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEK 223

Query: 238 SNVLLIGPTGSGKTLLAKTLARIVNVPFAIADATTFTQAGYVGEDVESILYKLLVEADFD 297
           SN+LL+GPTGSGKTLLAKTLAR VNVPF IADATT TQAGYVGEDVESILYKLL  AD++
Sbjct: 224 SNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYN 283

Query: 298 VELAQRGIVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVVSVPDKGARKHQS 357
           V  AQ+GIVY+DEVDKITKK ESLNI RDVSGEGVQQALLKMLE T+V+VP+KGARKH  
Sbjct: 284 VAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPR 343

Query: 358 GDSVLIDTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMRACGLPDAAVTSSLL 417
           GD++ IDTK+ILFICGGAFV++EK ISER+ DSSIGFG PVRANMRA G+ +AAV S+L+
Sbjct: 344 GDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLM 403

Query: 418 ENVESGDLIAYGLIPEFVGRFPILAGLSALSEDQLLQVLIEPKNALVKQYKKMFRMNDVN 477
           E VES DLIAYGLIPEFVGRFP+L  LSAL+E+QL+QVL EPKNAL KQYKKM++MN V 
Sbjct: 404 ETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVK 463

Query: 478 LHFTDNALRLIAKKAMAKNTGARGLRALLENILTEAMFEVPDKADIGN-IEGVLVDEEAV 536
           LHFT++ALRLIA+KA+ KNTGARGLRALLE+IL ++M+E+PD+    + IE V+VDEEAV
Sbjct: 464 LHFTESALRLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAV 523

Query: 537 GSLNGHGCGAKIL 549
                 G GAKIL
Sbjct: 524 EGEGRRGSGAKIL 536


>AT1G33360.1 | Symbols:  | ATP-dependent Clp protease |
           chr1:12092111-12095789 FORWARD LENGTH=656
          Length = 656

 Score =  506 bits (1303), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 256/370 (69%), Positives = 302/370 (81%), Gaps = 2/370 (0%)

Query: 185 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSSD-QDTDLVQPEKSNVLLI 243
           I   L++FV+GQ + KK+LSVAVYNHY R+   + +  S +    D D V+ +KSNVLL+
Sbjct: 255 ICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQPIDDDDNVELDKSNVLLM 314

Query: 244 GPTGSGKTLLAKTLARIVNVPFAIADATTFTQAGYVGEDVESILYKLLVEADFDVELAQR 303
           GPTGSGKTLLAKTLAR+VNVPF IADATT TQAGYVG+DVESIL+KLL  A+F+V+ AQ+
Sbjct: 315 GPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQ 374

Query: 304 GIVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVVSVPDKGARKHQSGDSVLI 363
           GIVY+DEVDKITKK ESLNI RDVSGEGVQQALLK+LE T+V+VP KGARKH  GD + I
Sbjct: 375 GIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQI 434

Query: 364 DTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMRACGLPDAAVTSSLLENVESG 423
           DTK+ILFICGGAFV+LEK I +R+QDSSIGFG PVRANM   G+   A+TSSLLE+VES 
Sbjct: 435 DTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESA 494

Query: 424 DLIAYGLIPEFVGRFPILAGLSALSEDQLLQVLIEPKNALVKQYKKMFRMNDVNLHFTDN 483
           DL AYGLIPEFVGRFPIL  LSAL+EDQL++VL+EPKNAL KQYKK+F MN+V LHFT+ 
Sbjct: 495 DLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEK 554

Query: 484 ALRLIAKKAMAKNTGARGLRALLENILTEAMFEVP-DKADIGNIEGVLVDEEAVGSLNGH 542
           AL +I+K+AM KNTGARGLRALLE+ILTEAMFE+P DK     I+ V+VDEE+  S    
Sbjct: 555 ALEIISKQAMVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASR 614

Query: 543 GCGAKILYRD 552
           GC AKIL  D
Sbjct: 615 GCTAKILRGD 624



 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 13/105 (12%)

Query: 62  QRRHKWEXXXXXXXXXXXXXIVYYDHIRADMNCPRCSRNMSVIFSNRPLSISG--HQPGL 119
           Q R K E              V    +RA+ NCPRCS+ M ++FSNR    S    +P  
Sbjct: 40  QERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDD 99

Query: 120 -----------YQALNLCPSCKTAFYFRPLKLSPLHGTFIEIARL 153
                      +Q++N CP+CKTA+ F P  +SPL GTFIEI R+
Sbjct: 100 SDSSGAGDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRV 144


>AT5G49840.1 | Symbols:  | ATP-dependent Clp protease |
           chr5:20255243-20259035 FORWARD LENGTH=608
          Length = 608

 Score =  504 bits (1299), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 261/380 (68%), Positives = 306/380 (80%), Gaps = 11/380 (2%)

Query: 185 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSS-------DQDTDLVQPEK 237
           I   L++FV+GQEK KK+LSVAVYNHY R+  A+ +  S S        D + D V+ +K
Sbjct: 203 ICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNIDHVELDK 262

Query: 238 SNVLLIGPTGSGKTLLAKTLARIVNVPFAIADATTFTQAGYVGEDVESILYKLLVEADFD 297
           SNVLL+GPTGSGKTLLAKTLARIVNVPFAIADAT+ TQA YVGEDVESILYKL VEA  +
Sbjct: 263 SNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLYVEAGCN 322

Query: 298 VELAQRGIVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVVSVP--DKGARKH 355
           VE AQRGIVY+DEVDK+T K  S N GRDVSGEGVQQ+LLK+LE TVVSVP  +KG R+ 
Sbjct: 323 VEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLRRD 382

Query: 356 QSGDSVLIDTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMRACGLPDAAVTSS 415
             GDS+ +DTK+ILFICGGAF++LEK +SER+ D+SIGFG  VR NM   GL  AAVTSS
Sbjct: 383 PRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVTSS 442

Query: 416 LLENVESGDLIAYGLIPEFVGRFPILAGLSALSEDQLLQVLIEPKNALVKQYKKMFRMND 475
           LLE+++S DL+AYGLIPEFVGR PIL  LSAL+EDQL+QVL EPK+AL KQYKK+FRMN+
Sbjct: 443 LLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNN 502

Query: 476 VNLHFTDNALRLIAKKAMAKNTGARGLRALLENILTEAMFEVPDKADIG--NIEGVLVDE 533
           V L FT+ A RLIA+KAM+KNTGARGLR++LE+ILTEAMFEVPD    G  +I+ VLVDE
Sbjct: 503 VQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDE 562

Query: 534 EAVGSLNGHGCGAKILYRDN 553
           EAVGS+   GCGAKIL  DN
Sbjct: 563 EAVGSVGSPGCGAKILKGDN 582



 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 58/70 (82%)

Query: 85  YDHIRADMNCPRCSRNMSVIFSNRPLSISGHQPGLYQALNLCPSCKTAFYFRPLKLSPLH 144
           YDHIR+D+NCPRCS  M VIFSNRPLS++  +PG+YQA+N C  CKTAFYFRP KLSPL 
Sbjct: 74  YDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREPGIYQAVNFCSQCKTAFYFRPFKLSPLQ 133

Query: 145 GTFIEIARLN 154
           G+FIE+ ++ 
Sbjct: 134 GSFIELGKVK 143