Miyakogusa Predicted Gene

Lj0g3v0058759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0058759.1 Non Chatacterized Hit- tr|C6T7T8|C6T7T8_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,96,0.000002,
,CUFF.2584.1
         (34 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | actin related protein...    55   1e-08

>AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | actin related protein 2
           | chr3:9952787-9955784 REVERSE LENGTH=389
          Length = 389

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/25 (96%), Positives = 25/25 (100%)

Query: 1   MVYLGGAVLAGIMKNAPEFWINRED 25
           MVYLGGAVLAGIMK+APEFWINRED
Sbjct: 350 MVYLGGAVLAGIMKDAPEFWINRED 374