Miyakogusa Predicted Gene

Lj0g3v0058489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0058489.1 Non Chatacterized Hit- tr|I1JJ41|I1JJ41_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24483
PE,90.26,0,seg,NULL; COG5,Conserved oligomeric Golgi complex, subunit
5; SUBFAMILY NOT NAMED,NULL; CONSERVED OL,CUFF.2624.1
         (832 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67930.1 | Symbols:  | Golgi transport complex protein-relate...  1030   0.0  

>AT1G67930.1 | Symbols:  | Golgi transport complex protein-related |
           chr1:25474218-25477332 REVERSE LENGTH=832
          Length = 832

 Score = 1030 bits (2662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/749 (67%), Positives = 582/749 (77%), Gaps = 3/749 (0%)

Query: 78  EKLHNAIRLLENQLRSEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 137
           E+LH AIRLL++QLR++V                                          
Sbjct: 84  ERLHQAIRLLDSQLRNDVISRHPELLAQLSSLSHADVSLSSLRSSVSSLQSSIRRVRSDL 143

Query: 138 XEPHRSIATKTSQLSNLHRTTELLQHSVRALRLSKKLRDLMAAADPEKLDLAKAAQFHSE 197
            EP +SI +K+ QLSNLH  TELL HSVR LRLSKKLRDL    DP+K+DL KAAQFH E
Sbjct: 144 SEPIKSIRSKSVQLSNLHTATELLSHSVRTLRLSKKLRDLADFPDPDKIDLTKAAQFHFE 203

Query: 198 ILSLCDEYDLAGIDAVDEELRWVRESGDRLRSEAMKVLERGMEGLNQAEVGTGLQVFYNL 257
           IL++C EYDL GID +DEE+++V E G++LRSEAMKVLERGMEGLNQAEVGTGLQVFYNL
Sbjct: 204 ILTMCKEYDLFGIDVIDEEIKFVTEIGEKLRSEAMKVLERGMEGLNQAEVGTGLQVFYNL 263

Query: 258 GELKGTVEQVVNKYKGMGAKSVSVALDMKAITXXXXXXXXXXXXXXXXXXXXXXXVKARE 317
           GELK TV+Q+VNKYKGM  KSVSVA+DMKAIT                        K RE
Sbjct: 264 GELKSTVDQLVNKYKGMAVKSVSVAMDMKAITSGSGGGFGPGGIRSSGSPHIGGGAKVRE 323

Query: 318 ALWQRLGTCMDQLHSIAVAVWHLQRVLSKKRDPFTHVLLLDEVIQEGDPMLTDRVWEAIA 377
           ALWQR+ +CM+QL S+ VAVWHLQRVLSKKRDPFTHVLLLDEVI+EGD MLTDRVW+A+ 
Sbjct: 324 ALWQRMASCMEQLCSLVVAVWHLQRVLSKKRDPFTHVLLLDEVIKEGDSMLTDRVWDALV 383

Query: 378 KAFASQMKSAFTASSFVKEIFTMGYPKLYSMIENLLERITRDTDVKGVLPAISSGGKDQM 437
           KAF SQMKSA+TASSFVKEIFTMGYPKL SMIENLLERI+RDTDVKGVLPAI+   K+QM
Sbjct: 384 KAFTSQMKSAYTASSFVKEIFTMGYPKLVSMIENLLERISRDTDVKGVLPAINLERKEQM 443

Query: 438 VSAVEIFQSAFLGHCLSRLSDLVNSVFPMSSRGSVPSKXXXXXXXXXXXXXXXAVQMDAR 497
           V+ + IFQ+AFL  C  RLSDLVNS+FPMSSRGS+PSK               AV  DAR
Sbjct: 444 VACIAIFQTAFLSLCFGRLSDLVNSIFPMSSRGSLPSKEQISQVLSHIQDEIEAVHPDAR 503

Query: 498 LTLLVLREIGKVLLLLAERTEYQISTGPESRQVSGPATPAQLKNFTLCQHLQDVHARIST 557
           LTLLVLREIGK L  LA+R E QISTGPE+RQ+SGPAT  Q++NFTLCQHLQ +H  IS+
Sbjct: 504 LTLLVLREIGKALSNLAQRAECQISTGPETRQISGPATSTQIRNFTLCQHLQGIHTHISS 563

Query: 558 MLKGMPSIAADVLSASLGAIYGVACDSVTSLFQAMLDRLESCILQIHDHNFGVLGMDAAM 617
           M+  +PSIA DVLS  L AIY  AC+ VT LF+AM D+LESCILQIHD NFG    DA M
Sbjct: 564 MVADLPSIATDVLSPYLAAIYDAACEPVTPLFKAMRDKLESCILQIHDQNFG--ADDADM 621

Query: 618 DNNASPYMEELQKCILHFRSEFLSKLLPSRAT-TAKGTENICTRLVQSMASRVLVFFIRH 676
           DNNAS YMEELQ+ ILHFR EFLS+LLPS A     GTE+ICTRL + MASRVL+F+IRH
Sbjct: 622 DNNASSYMEELQRSILHFRKEFLSRLLPSAANANTAGTESICTRLTRQMASRVLIFYIRH 681

Query: 677 ASLVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRSFRPLIFLETSQLASS 736
           ASLVRPLSE GKLRMA+DMAELELAVGQNLFPVEQLGAPYRALR+FRPL+FLETSQ+ SS
Sbjct: 682 ASLVRPLSEWGKLRMAKDMAELELAVGQNLFPVEQLGAPYRALRAFRPLVFLETSQMGSS 741

Query: 737 PLLQDLPPNVILHHLYTRGPEDLQSPLQRNKLTPLQYSLWLDSQGEDQIWKGIKATLDDY 796
           PL+ DLPP+++LHHLYTRGP++L+SP+Q+N+L+P QYSLWLD+Q EDQIWKGIKATLDDY
Sbjct: 742 PLINDLPPSIVLHHLYTRGPDELESPMQKNRLSPKQYSLWLDNQREDQIWKGIKATLDDY 801

Query: 797 AINVRSRGDKEFSPVYPLMLQLGSTLTEK 825
           A+ +RSRGDKEFSPVYPLMLQ+GS+LT++
Sbjct: 802 AVKIRSRGDKEFSPVYPLMLQIGSSLTQE 830