Miyakogusa Predicted Gene

Lj0g3v0057889.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0057889.1 tr|G7I5V4|G7I5V4_MEDTR GTPase obg OS=Medicago
truncatula GN=MTR_1g023160 PE=4 SV=1,68.62,0,seg,NULL; P-loop
containing nucleoside triphosphate hydrolases,NULL; Obg GTP-binding
protein N-termi,NODE_55911_length_1868_cov_49.085117.path1.1
         (476 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G18570.1 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family ...   157   2e-38
AT1G07615.1 | Symbols:  | GTP-binding protein Obg/CgtA | chr1:23...   118   8e-27
AT1G30580.1 | Symbols:  | GTP binding | chr1:10831953-10835454 R...    63   5e-10
AT4G39520.1 | Symbols:  | GTP-binding protein-related | chr4:183...    58   1e-08
AT1G56050.1 | Symbols:  | GTP-binding protein-related | chr1:209...    56   6e-08
AT1G72660.3 | Symbols:  | P-loop containing nucleoside triphosph...    55   1e-07
AT1G72660.2 | Symbols:  | P-loop containing nucleoside triphosph...    55   1e-07
AT1G72660.1 | Symbols:  | P-loop containing nucleoside triphosph...    55   1e-07
AT1G17470.2 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally reg...    55   1e-07
AT1G17470.1 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally reg...    55   1e-07

>AT5G18570.1 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family
           protein | chr5:6171839-6174823 REVERSE LENGTH=681
          Length = 681

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/344 (35%), Positives = 174/344 (50%), Gaps = 44/344 (12%)

Query: 69  FDHAVITVRGGDGGHGAVLNQKVKEEKETKNWKKSSFKRDFDGSIVLPLGGHGG------ 122
           FD A I VR GDGG+G V                 +F+R+      +P GG  G      
Sbjct: 211 FDRAKIYVRAGDGGNGVV-----------------AFRRE----KFVPFGGPSGGDGGRG 249

Query: 123 -DVLVYADESKDTLLEFHNKGRFNAKRGGNVDAMGLLTSHLRDGLAAPTLRIAVPLGTVV 181
            +V V  D S ++LL F     F A RG +    G + S    G     + + V  GTVV
Sbjct: 250 GNVYVEVDGSMNSLLPFRKSVHFRAGRGEH--GRGKMQS----GAKGDNVVVKVAPGTVV 303

Query: 182 KSKRGKTLADLAQPGDEVIVARGG-QGGISLLEMPQNKRKKMMALTTNVMRDESDKVLVH 240
           +  R        + G+E  V       G   L +P  +  +  A   + M ++  ++  +
Sbjct: 304 RQAREVGSEVEGEEGEEKEVLLELLHPGQRALLLPGGRGGRGNASFKSGM-NKVPRIAEN 362

Query: 241 GQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGG 300
           G+ G E+ L+L L++VADVG++G PNAGKSTLL+ I+ A+P IA+YPFTTL+PNLG +  
Sbjct: 363 GEEGPEMWLDLELKLVADVGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSF 422

Query: 301 DPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPINDY 360
           D       Y S   +ADLPGL+EGAH G GLG  F              D +   P  ++
Sbjct: 423 D-------YDSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHVVDGSAPQPELEF 475

Query: 361 RTVREELRMYNPEYLERPYIVVLNKIDLPEVKDRLPLLTREILR 404
             VR EL +++PE  E+PY+V  NK+DLP+  ++ P+  +E LR
Sbjct: 476 EAVRLELELFSPEIAEKPYVVAYNKMDLPDAYEKWPMF-QETLR 518


>AT1G07615.1 | Symbols:  | GTP-binding protein Obg/CgtA |
           chr1:2342277-2344200 REVERSE LENGTH=493
          Length = 493

 Score =  118 bits (296), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 115/235 (48%), Gaps = 30/235 (12%)

Query: 188 TLADLAQPGDEVIVARGGQGGISLLEMPQNKRKKMMALTTNVMRDESDKVLVH------- 240
            +A+L Q G  VI+ARGG+GG+  +   +  R    A +T  +R  + + +         
Sbjct: 224 NVAELTQQGQRVIIARGGEGGLGNVSATRYVRGSKFAKST--IRQTNLRSMEDDAEEDDE 281

Query: 241 ------GQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPN 294
                 G  G E  L L L+ +ADVGL+G+PNAGKSTLL A++ AKP +  Y FTTL PN
Sbjct: 282 RSSIKAGLLGSEAVLILELKSIADVGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPN 341

Query: 295 LGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATE 354
           LG +  D            T+AD+PGLI+GAH  +GLG NF              D A+ 
Sbjct: 342 LGNVNYD--------DFSMTVADIPGLIKGAHQNRGLGHNFLRHIERTKVLAYVVDLASG 393

Query: 355 -------DPINDYRTVREELRMYNPEYLERPYIVVLNKIDLPEVKDRLPLLTREI 402
                   P    R +  EL  +     +R  ++V NKID    ++RL  L R +
Sbjct: 394 LDGCEGLTPWQQLRDLVMELEFHEEGLSDRSSLIVANKIDEEGAEERLKELKRRV 448


>AT1G30580.1 | Symbols:  | GTP binding | chr1:10831953-10835454
           REVERSE LENGTH=394
          Length = 394

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 19/136 (13%)

Query: 259 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLG-----GDPSLGAGMYSSEA 313
           +G++GLPN GKSTL   +T       ++PF T+ PN  R+       D         SE 
Sbjct: 27  IGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFDWLCQTYKPKSEI 86

Query: 314 ----TLADLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATE----------DPIND 359
                + D+ GL+ GAH G+GLG NF               A  +          DP+ D
Sbjct: 87  PAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDADIIHVDDIVDPVRD 146

Query: 360 YRTVREELRMYNPEYL 375
             T+ EELR+ + E++
Sbjct: 147 LETITEELRLKDIEFV 162


>AT4G39520.1 | Symbols:  | GTP-binding protein-related |
           chr4:18371329-18374000 REVERSE LENGTH=369
          Length = 369

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 53/111 (47%), Gaps = 14/111 (12%)

Query: 259 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTL--MPNLGRLGGDPSLGAGMYSSEATLA 316
           VGL+G P+ GKSTLL  +T    ++A Y FTTL  +P +    G          ++  L 
Sbjct: 68  VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRG----------AKIQLL 117

Query: 317 DLPGLIEGAHLGKGLGRNFXXXXXXXXXXXXXXDAATEDPINDYRTVREEL 367
           DLPG+IEGA  GKG GR                DA    PI   R + +EL
Sbjct: 118 DLPGIIEGAKDGKGRGRQVISTARTCNCILIVLDAIK--PITHKRLIEKEL 166


>AT1G56050.1 | Symbols:  | GTP-binding protein-related |
           chr1:20963793-20966181 FORWARD LENGTH=421
          Length = 421

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 260 GLIGLPNAGKSTLL-AAITLAKPDIADYPFTTLMPNLG-------RLGGDPSLGAGMYSS 311
           G++GLPN GKSTL  A +   K   A++PF T+ PN+G       RL     L     + 
Sbjct: 57  GIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLQVLSKLSGSQKTV 116

Query: 312 EATL--ADLPGLIEGAHLGKGLGRNF 335
            A++   D+ GL++GA  G+GLG  F
Sbjct: 117 PASIEFVDIAGLVKGASQGEGLGNKF 142


>AT1G72660.3 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:27354161-27356543
           FORWARD LENGTH=399
          Length = 399

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 259 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 318
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYN--------DTKIQLLDL 116

Query: 319 PGLIEGAHLGKGLGRN 334
           PG+IEGA  GKG GR 
Sbjct: 117 PGIIEGASEGKGRGRQ 132


>AT1G72660.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:27354161-27356543
           FORWARD LENGTH=399
          Length = 399

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 259 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 318
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYN--------DTKIQLLDL 116

Query: 319 PGLIEGAHLGKGLGRN 334
           PG+IEGA  GKG GR 
Sbjct: 117 PGIIEGASEGKGRGRQ 132


>AT1G72660.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:27354161-27356543
           FORWARD LENGTH=399
          Length = 399

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 259 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 318
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYN--------DTKIQLLDL 116

Query: 319 PGLIEGAHLGKGLGRN 334
           PG+IEGA  GKG GR 
Sbjct: 117 PGIIEGASEGKGRGRQ 132


>AT1G17470.2 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally
           regulated G-protein 1 | chr1:6003442-6006155 FORWARD
           LENGTH=399
          Length = 399

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 259 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 318
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYN--------DTKIQLLDL 116

Query: 319 PGLIEGAHLGKGLGRN 334
           PG+IEGA  GKG GR 
Sbjct: 117 PGIIEGASEGKGRGRQ 132


>AT1G17470.1 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally
           regulated G-protein 1 | chr1:6003442-6006155 FORWARD
           LENGTH=399
          Length = 399

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 259 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADL 318
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYN--------DTKIQLLDL 116

Query: 319 PGLIEGAHLGKGLGRN 334
           PG+IEGA  GKG GR 
Sbjct: 117 PGIIEGASEGKGRGRQ 132