Miyakogusa Predicted Gene

Lj0g3v0057829.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0057829.1 Non Chatacterized Hit- tr|I1MXZ3|I1MXZ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6966 PE=,93.4,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; GTP1OBG,GTP
binding domain; no
descriptio,NODE_6400_length_1868_cov_149.436829.path1.1
         (294 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57960.1 | Symbols:  | GTP-binding protein, HflX | chr5:23463...   516   e-147
AT3G49725.1 | Symbols:  | GTP-binding protein, HflX | chr3:18442...   113   1e-25
AT5G18570.1 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family ...    55   8e-08

>AT5G57960.1 | Symbols:  | GTP-binding protein, HflX |
           chr5:23463133-23466481 REVERSE LENGTH=540
          Length = 540

 Score =  516 bits (1329), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 245/289 (84%), Positives = 273/289 (94%)

Query: 1   MEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRNQIGVLKKELESVRKHRKQYR 60
           MEYQLPRLT+MWTHLERQ+GG+VKGMGEKQIEVDKRILR QIGVLKKELESVRKHRKQYR
Sbjct: 242 MEYQLPRLTRMWTHLERQSGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQYR 301

Query: 61  NRRFSIPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLL 120
           +RR +IPVPVVSLVGYTNAGKSTLLNQLTGA+VLAE++LFATLDPTTRRVQM+NGKEFLL
Sbjct: 302 SRRVAIPVPVVSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQMQNGKEFLL 361

Query: 121 TDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSP 180
           TDTVGFIQKLPTTLVAAFRATLEEI+ESSLLVHVVDISHPLAEQQI AV+KV+SELDVS 
Sbjct: 362 TDTVGFIQKLPTTLVAAFRATLEEIAESSLLVHVVDISHPLAEQQIEAVEKVMSELDVSS 421

Query: 181 IPRLMVWNKVDKASDPQKIRLDAEKREDVICISALTGEGLQEFCNAVQDKLKDSMVWVEA 240
           IP+L+VWNKVD+  DPQK++L+AE+  D ICISALTGEGL +FCNAV +KLKDSMVWVEA
Sbjct: 422 IPKLVVWNKVDRVDDPQKVKLEAEETGDTICISALTGEGLDDFCNAVHEKLKDSMVWVEA 481

Query: 241 LLPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARLLTPMRQM 289
           LLPF+ GDLLSTIH+VGMV++TEYTE GT I+AHVPLRFA+LL PMR +
Sbjct: 482 LLPFDKGDLLSTIHKVGMVKETEYTENGTLIRAHVPLRFAQLLKPMRHL 530


>AT3G49725.1 | Symbols:  | GTP-binding protein, HflX |
           chr3:18442448-18445397 REVERSE LENGTH=620
          Length = 620

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 85/126 (67%), Gaps = 5/126 (3%)

Query: 70  VVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQK 129
            +++VGYTNAGKSTL++ LT   +   ++LFATLDPT +   + +G   LL+DTVGFI  
Sbjct: 347 TIAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNFVLLSDTVGFISD 406

Query: 130 LPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSPIPRLM---- 185
           LP  LV AF++TLEE+ E+ LL+HVVD + P  E+  + V  VL+++ V P  +L     
Sbjct: 407 LPIQLVKAFQSTLEEVVEADLLLHVVDSTAPNIEEHRSTVLHVLNQIGV-PEEKLQNMIE 465

Query: 186 VWNKVD 191
           VWNK+D
Sbjct: 466 VWNKID 471


>AT5G18570.1 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family
           protein | chr5:6171839-6174823 REVERSE LENGTH=681
          Length = 681

 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 19/174 (10%)

Query: 71  VSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKL 130
           V +VG  NAGKSTLL+ ++ A     +  F TL P    V           D+   +  L
Sbjct: 381 VGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVVSFD-------YDSTMVVADL 433

Query: 131 PTTLVAAFRA------TLEEISESSLLVHVVDISHPLAEQQINAV--DKVLSELDVSPIP 182
           P  L  A R        L      S LVHVVD S P  E +  AV  +  L   +++  P
Sbjct: 434 PGLLEGAHRGFGLGHEFLRHTERCSALVHVVDGSAPQPELEFEAVRLELELFSPEIAEKP 493

Query: 183 RLMVWNKVDKASDPQKIRLDAE----KREDVICISALTGEGLQEFCNAVQDKLK 232
            ++ +NK+D     +K  +  E    +  +  C+SA+  EG  E  ++V + LK
Sbjct: 494 YVVAYNKMDLPDAYEKWPMFQETLRARGIEPFCMSAVQREGTHEVISSVYELLK 547