Miyakogusa Predicted Gene
- Lj0g3v0057749.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0057749.1 Non Chatacterized Hit- tr|I1K3M3|I1K3M3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13212 PE,84.81,0,WD40
repeat-like,WD40-repeat-containing domain; no description,WD40/YVTN
repeat-like-containing doma,CUFF.2563.1
(473 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G19540.1 | Symbols: | Transducin family protein / WD-40 repe... 627 e-180
AT2G16780.1 | Symbols: MSI2, MSI02, NFC02, NFC2 | Transducin fam... 135 4e-32
AT5G58230.1 | Symbols: MSI1, MEE70, ATMSI1 | Transducin/WD40 rep... 123 2e-28
AT4G35050.1 | Symbols: MSI3, NFC3 | Transducin family protein / ... 123 2e-28
AT2G19520.1 | Symbols: FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4 | Tr... 114 1e-25
AT4G29730.1 | Symbols: NFC5, MSI5 | nucleosome/chromatin assembl... 105 8e-23
AT1G12910.1 | Symbols: ATAN11, LWD1 | Transducin/WD40 repeat-lik... 68 2e-11
AT3G63460.2 | Symbols: | transducin family protein / WD-40 repe... 67 3e-11
AT3G63460.1 | Symbols: | transducin family protein / WD-40 repe... 67 3e-11
AT3G63460.3 | Symbols: | transducin family protein / WD-40 repe... 67 3e-11
AT5G24520.2 | Symbols: TTG1, TTG | Transducin/WD40 repeat-like s... 65 8e-11
AT5G24520.3 | Symbols: TTG1, TTG | Transducin/WD40 repeat-like s... 65 8e-11
AT5G24520.1 | Symbols: TTG1, TTG, URM23, ATTTG1 | Transducin/WD4... 65 8e-11
AT3G26640.1 | Symbols: LWD2 | Transducin/WD40 repeat-like superf... 64 2e-10
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 63 4e-10
AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 61 1e-09
AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 61 2e-09
AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 61 2e-09
AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein ... 61 2e-09
AT4G18900.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 60 4e-09
AT4G18905.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 59 7e-09
AT4G18905.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 59 7e-09
AT1G18830.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 59 9e-09
AT4G35370.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 58 1e-08
AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfam... 58 1e-08
AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfam... 58 2e-08
AT4G22910.1 | Symbols: FZR2, CCS52A1 | FIZZY-related 2 | chr4:12... 57 2e-08
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 57 3e-08
AT5G13840.2 | Symbols: FZR3 | FIZZY-related 3 | chr5:4468677-447... 57 3e-08
AT5G13840.1 | Symbols: FZR3 | FIZZY-related 3 | chr5:4468677-447... 57 3e-08
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 55 8e-08
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 54 2e-07
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 54 2e-07
AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein | chr... 54 3e-07
AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 9e-07
AT2G30050.1 | Symbols: | transducin family protein / WD-40 repe... 51 2e-06
AT5G27570.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 2e-06
AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 2e-06
AT1G29260.1 | Symbols: PEX7, ATPEX7 | peroxin 7 | chr1:10224923-... 51 2e-06
AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 2e-06
AT1G79990.5 | Symbols: | structural molecules | chr1:30085910-3... 50 2e-06
AT1G79990.3 | Symbols: | structural molecules | chr1:30085910-3... 50 2e-06
AT1G79990.1 | Symbols: | structural molecules | chr1:30084522-3... 50 2e-06
AT5G27945.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 3e-06
AT4G33260.1 | Symbols: CDC20.2 | Transducin family protein / WD-... 50 3e-06
AT4G33270.1 | Symbols: CDC20.1 | Transducin family protein / WD-... 50 3e-06
AT3G21540.1 | Symbols: | transducin family protein / WD-40 repe... 50 3e-06
AT4G33260.2 | Symbols: CDC20.2 | Transducin family protein / WD-... 50 3e-06
AT1G52360.1 | Symbols: | Coatomer, beta' subunit | chr1:1949928... 50 4e-06
AT1G52360.2 | Symbols: | Coatomer, beta' subunit | chr1:1949942... 50 4e-06
AT5G26900.1 | Symbols: | Transducin family protein / WD-40 repe... 50 4e-06
AT3G44530.1 | Symbols: HIRA | homolog of histone chaperone HIRA ... 49 5e-06
AT3G44530.2 | Symbols: HIRA | homolog of histone chaperone HIRA ... 49 6e-06
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 7e-06
AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like superf... 49 7e-06
AT3G01340.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 1e-05
AT3G01340.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 1e-05
>AT2G19540.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr2:8461804-8464347 FORWARD LENGTH=469
Length = 469
Score = 627 bits (1617), Expect = e-180, Method: Compositional matrix adjust.
Identities = 301/443 (67%), Positives = 347/443 (78%), Gaps = 3/443 (0%)
Query: 31 PQIPVKVWQPGVDKMEDDEELQCDPSAYNSLHAFHIGWPCLSFDVVRDTLGLVRTEFPHT 90
P IP +VWQPGVD +ED EELQCDPSAYNSLH FH+GWPCLSFD++ D LGL RTEFPHT
Sbjct: 25 PSIPTRVWQPGVDTLEDGEELQCDPSAYNSLHGFHVGWPCLSFDILGDKLGLNRTEFPHT 84
Query: 91 VYFMAGTQAEKASWNSIGIFKVSKISGKRRELVPKLEAXXXXXXXXXXXXXXXXXXXXXX 150
+Y +AGTQAEKA+ NSIG+FK++ +SGKRR++VPK
Sbjct: 85 LYMVAGTQAEKAAHNSIGLFKITNVSGKRRDVVPKTFGNGEDEDEDDEDDSDSDDDDGDE 144
Query: 151 XAQGPTLQLRKVTHEGCVNRIRSMTQNPHICATWADTGHVQIWDMSSHLNSLAETET-GA 209
++ P +Q+R+V H GCVNRIR+M QN HIC +WAD+GHVQ+WDMSSHLN+LAE+ET G
Sbjct: 145 ASKTPNIQVRRVAHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESETEGK 204
Query: 210 QGVAAVFNQVPLHKFK-HKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNA 268
G + V NQ PL F HKDEGYAIDWSP GRL+SGDC + I+LWEP S +W +D
Sbjct: 205 DGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASG-SWAVDPI 263
Query: 269 PFIGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNR 328
PF GHTASVEDLQWSP E++VFASCSVDGS+A+WD RLGKSPA FKAH ADVNV+SWNR
Sbjct: 264 PFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNR 323
Query: 329 LAPCMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDN 388
LA CMLASGSDDGT SIRDLRL+K GD+VVAHFEYHK ITSIEWS HEAS+LAV+S DN
Sbjct: 324 LASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDN 383
Query: 389 QLTIWDLSLERDXXXXXXXXXXXXXLVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGMI 448
QLTIWDLSLE+D LVN P+DLPPQLLF+HQGQKDLKELHWH QIPGMI
Sbjct: 384 QLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLLFVHQGQKDLKELHWHNQIPGMI 443
Query: 449 VSTAADGFNILMPSNIQSTLPSD 471
+STA DGFNILMP NIQ+TLPS+
Sbjct: 444 ISTAGDGFNILMPYNIQNTLPSE 466
>AT2G16780.1 | Symbols: MSI2, MSI02, NFC02, NFC2 | Transducin family
protein / WD-40 repeat family protein |
chr2:7281615-7283583 REVERSE LENGTH=415
Length = 415
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 143/304 (47%), Gaps = 27/304 (8%)
Query: 155 PTLQLR-KVTHEGCVNRIRSMTQNPHICATWADTGHVQIWDMSSHLNSLAETETGAQGVA 213
P +++R ++ +G VNR R M Q P + V ++D + H +E
Sbjct: 105 PKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPD--- 161
Query: 214 AVFNQVPLHKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFI-- 271
L H EGY + WSP G L+SG + I LW+ ++ + NA F+
Sbjct: 162 -------LRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYE 214
Query: 272 GHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAP 331
GH +++ D+ W +++F S DG + IWDTR + K H+ +VN LS+N
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQ-VKVHEREVNYLSFNPFNE 273
Query: 332 CMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLT 391
+LA+ S D T+++ DLR L V++ H+ + +EW P+ + LA S ED +L
Sbjct: 274 WVLATASSDSTVALFDLRKLNAPLHVMSS---HEGEVFQVEWDPNHETVLASSGEDRRLM 330
Query: 392 IWDLSLERDXXXXXXXXXXXXXLVNAPEDLPPQLLFIHQGQK-DLKELHWHTQIPGMIVS 450
+WDL+ + ED PP+LLF H G K + + W+ P +I S
Sbjct: 331 VWDLNRVGEEQLEIELDA---------EDGPPELLFSHGGHKAKISDFAWNKNEPWVIAS 381
Query: 451 TAAD 454
A D
Sbjct: 382 VAED 385
>AT5G58230.1 | Symbols: MSI1, MEE70, ATMSI1 | Transducin/WD40
repeat-like superfamily protein | chr5:23556112-23557994
FORWARD LENGTH=424
Length = 424
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 141/327 (43%), Gaps = 44/327 (13%)
Query: 152 AQGPTLQLRKVTHEGCVNRIRSMTQNPHICATWADTGHVQIWDMSSH-----LNSLAETE 206
A G ++++ H+G VNR R M QNP I AT V ++D S H L+ +
Sbjct: 112 ATGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPD 171
Query: 207 TGAQGVAAVFNQVPLHKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNID 266
+G H EGY + WS G L+SG + I LW+ +
Sbjct: 172 LKLRG--------------HSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSL 217
Query: 267 NAP--FIGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTR--LGKSPAAFFKAHKADVN 322
+A F H VED+ W +++F S D + IWD R P AH +VN
Sbjct: 218 DAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVN 277
Query: 323 VLSWNRLAPCMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLA 382
L++N ++A+GS D T+ + DLR L + + F+ HK + + W+P + LA
Sbjct: 278 CLAFNPFNEWVVATGSTDKTVKLFDLRKLS---TALHTFDSHKEEVFQVGWNPKNETILA 334
Query: 383 VSSEDNQLTIWDLSLERDXXXXXXXXXXXXXLVNAPEDLPPQLLFIHQGQ-KDLKELHWH 441
+L +WDLS V ED PP+LLFIH G + + W+
Sbjct: 335 SCCLGRRLMVWDLS-----------RIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWN 383
Query: 442 TQIPGMIVSTAADGFNIL----MPSNI 464
+I S A D NIL M NI
Sbjct: 384 PCEDWVISSVAED--NILQIWQMAENI 408
>AT4G35050.1 | Symbols: MSI3, NFC3 | Transducin family protein /
WD-40 repeat family protein | chr4:16682752-16684751
REVERSE LENGTH=424
Length = 424
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 140/304 (46%), Gaps = 27/304 (8%)
Query: 155 PTLQLR-KVTHEGCVNRIRSMTQNPHICATWADTGHVQIWDMSSHLNSLAETETGAQGVA 213
P ++++ K+ +G VNR R M Q P + V ++D + +E
Sbjct: 106 PKVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPD--- 162
Query: 214 AVFNQVPLHKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFI-- 271
L H+ EGY + WS G L+SG + I LW+ ++ AT + N +
Sbjct: 163 -------LRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYE 215
Query: 272 GHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAP 331
GH + +ED+ W +++F S D + IWD R + K H+ ++N LS+N
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQ-VKVHEREINYLSFNPFNE 274
Query: 332 CMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLT 391
+LA+ S D T+++ DLR L V++ H+ + +EW P+ + LA S ED +L
Sbjct: 275 WVLATASSDSTVALFDLRKLTAPLHVLSK---HEGEVFQVEWDPNHETVLASSGEDRRLM 331
Query: 392 IWDLSLERDXXXXXXXXXXXXXLVNAPEDLPPQLLFIHQGQK-DLKELHWHTQIPGMIVS 450
+WD++ D ED PP+LLF H G K + + W+ P +I S
Sbjct: 332 VWDINRVGDEQLEIELDA---------EDGPPELLFSHGGHKAKISDFAWNKDEPWVISS 382
Query: 451 TAAD 454
A D
Sbjct: 383 VAED 386
>AT2G19520.1 | Symbols: FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4 |
Transducin family protein / WD-40 repeat family protein
| chr2:8456006-8459235 FORWARD LENGTH=507
Length = 507
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 144/333 (43%), Gaps = 62/333 (18%)
Query: 158 QLRKVTHEGCVNRIRSMTQNPHICATWADTGHVQIWDMSSHLNSLAETETGAQGVAAVFN 217
+ + + H G VNRIR + QN I AT D+ V IWD+ ET+ V N
Sbjct: 157 KYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDV--------ETQPNRHAVLGAAN 208
Query: 218 QVP-LHKFKHKDEG-YAIDWSPVVPGRLVSGDCNNCIYLW-------------------- 255
P L H+D +A+ P P ++SG + + LW
Sbjct: 209 SRPDLILTGHQDNAEFALAMCPTEP-FVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSII 267
Query: 256 EPTSAATWNIDNAPFI-------GHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGK 308
+ T T + + +P + GH +VED+ +SPT F S D + +WD R G
Sbjct: 268 KQTGEGT-DKNESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGT 326
Query: 309 SPAAFF-KAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLLKEG--DSVVAHFEYHK 365
+P KAH AD++ + WN ++ +GS D T+ + D R L S + FE HK
Sbjct: 327 NPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHK 386
Query: 366 RSITSIEWSPHEASSLAVSSEDNQLTIWD---LSLERDXXXXXXXXXXXXXLVNAPEDLP 422
++ ++WSP ++S S+ED L IWD +S + D P
Sbjct: 387 AAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKS----------------P 430
Query: 423 PQLLFIHQGQKD-LKELHWHTQIPGMIVSTAAD 454
L F H G +D + + HW+ P IVS + D
Sbjct: 431 AGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDD 463
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 103/250 (41%), Gaps = 47/250 (18%)
Query: 153 QGPTLQLRKVTH--EGCVNRIR-SMTQNPHICATWADTGHVQIWDMSSHLNSLAETETGA 209
+ PT+ R V H E V + S T C+ D+ + +WD + N + + E
Sbjct: 278 ESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLI-LWDARTGTNPVTKVEKA- 335
Query: 210 QGVAAVFNQVPLHKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAP 269
H + + +DW+P +++G +N + L++ T N +P
Sbjct: 336 ----------------HDADLHCVDWNPHDDNLILTGSADNTVRLFD-RRKLTANGVGSP 378
Query: 270 ---FIGHTASVEDLQWSPTEDHVFASCSVDGSIAIWD--------TRLGKSPAAFF---K 315
F GH A+V +QWSP + VF S + DG + IWD R KSPA F
Sbjct: 379 IYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPAGLFFQHA 438
Query: 316 AHKADVNVLSWNRLAPCMLASGSDD-------GTISI---RDLRLLKEGDSVVAHFEYHK 365
H+ V WN P + S SDD GT+ I DL + + + VVA E K
Sbjct: 439 GHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMSDL-IYRPEEEVVAELEKFK 497
Query: 366 RSITSIEWSP 375
+ + P
Sbjct: 498 SHVMTCASKP 507
>AT4G29730.1 | Symbols: NFC5, MSI5 | nucleosome/chromatin assembly
factor group C5 | chr4:14559255-14562522 REVERSE
LENGTH=487
Length = 487
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 136/327 (41%), Gaps = 54/327 (16%)
Query: 158 QLRKVTHEGCVNRIRSMTQNPHICATWADTGHVQIWDMSSHLNSLAETETGAQGVAAVFN 217
+ + + H G VNRIR + QN I AT D+ + IW+ ET+ V +
Sbjct: 137 KYKTIIHPGEVNRIRELPQNSKIVATHTDSPDILIWN--------TETQPDRYAVLGAPD 188
Query: 218 QVP-LHKFKHKDEG-YAIDWSPVVPGRLVSGDCNNCIYLWE--------------PTSAA 261
P L H+D+ +A+ P P ++SG + + LW P S+
Sbjct: 189 SRPDLLLIGHQDDAEFALAMCPTEP-FVLSGGKDKSVILWNIQDHITMAGSDSKSPGSSF 247
Query: 262 TWNIDNAP------------FIGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKS 309
+ + + GH +VED+ + P+ F S D + +WD R G S
Sbjct: 248 KQTGEGSDKTGGPSVGPRGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTS 307
Query: 310 PA-AFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLLKEGD--SVVAHFEYHKR 366
PA KAH AD++ + WN ++ +GS D T+ + D R L S V FE H+
Sbjct: 308 PAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRA 367
Query: 367 SITSIEWSPHEASSLAVSSEDNQLTIWDLSLERDXXXXXXXXXXXXXLVNAPEDLPPQLL 426
++ ++WSP ++S S+ED L IWD P L
Sbjct: 368 AVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKT-------------PDGLF 414
Query: 427 FIHQGQKD-LKELHWHTQIPGMIVSTA 452
F H G +D + + HW P IVS +
Sbjct: 415 FQHAGHRDKVVDFHWSLLNPWTIVSVS 441
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 226 HKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNA--PFIGHTASVEDLQWS 283
H + + +DW+P +++G +N + +++ + + + + F GH A+V +QWS
Sbjct: 316 HDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWS 375
Query: 284 PTEDHVFASCSVDGSIAIWDT--------RLGKSPAAFF---KAHKADVNVLSWNRLAPC 332
P + VF S + DG + IWD R K+P F H+ V W+ L P
Sbjct: 376 PDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKTPDGLFFQHAGHRDKVVDFHWSLLNPW 435
Query: 333 MLASGSDD-------GTISI---RDLRLLKEGDSVVAHFEYHKRSI 368
+ S SD+ GT+ I DL + + D V+ E K +
Sbjct: 436 TIVSVSDNCESIGGGGTLQIWRMSDL-IYRPEDEVLTELEKFKSHV 480
>AT1G12910.1 | Symbols: ATAN11, LWD1 | Transducin/WD40 repeat-like
superfamily protein | chr1:4395114-4396154 REVERSE
LENGTH=346
Length = 346
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 232 AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVFA 291
+ DW+ P R+ + + +W+ A + I H V D+ W VFA
Sbjct: 140 SFDWNEAEPRRIGTSSTDTTCTIWDIEREAV----DTQLIAHDKEVFDIAWGGV--GVFA 193
Query: 292 SCSVDGSIAIWDTRLGKSPAAFFKAHKADVNV--LSWNRLAPCMLASG-SDDGTISIRDL 348
S S DGS+ ++D R + +++ + D + L WN+ P +A+ D + + D+
Sbjct: 194 SVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDI 253
Query: 349 RLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLS 396
R V + H+ S+ +I W+PH + + + +D+Q IWD+S
Sbjct: 254 RFPALP---VVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDIS 298
>AT3G63460.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:23431009-23437241 REVERSE
LENGTH=1102
Length = 1102
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 27/237 (11%)
Query: 222 HKFKHKDEGYAIDWSPVVPGRLVSG--DCNNCIY-LWEPTSAATWNIDNAPFIGHTASVE 278
H HK ++++ + L SG D CI+ L +P+ + + + +
Sbjct: 117 HLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEIS 176
Query: 279 DLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGS 338
+ W+ + AS S +G+ IWD R K F + + +VL WN + S
Sbjct: 177 FISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVAS 236
Query: 339 DDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSLE 398
DD + L ++ S V F H+R + ++EW P ++S L ++DN+ WD +
Sbjct: 237 DDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTA 296
Query: 399 RDXXXXXXXXXXXXXLVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGMIVSTAADG 455
+LP G ++HW+ +IPG+I +++ DG
Sbjct: 297 EIVA-----------------ELP-------AGNNWNFDVHWYPKIPGVISASSFDG 329
>AT3G63460.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:23431009-23437241 REVERSE
LENGTH=1104
Length = 1104
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 27/237 (11%)
Query: 222 HKFKHKDEGYAIDWSPVVPGRLVSG--DCNNCIY-LWEPTSAATWNIDNAPFIGHTASVE 278
H HK ++++ + L SG D CI+ L +P+ + + + +
Sbjct: 117 HLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEIS 176
Query: 279 DLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGS 338
+ W+ + AS S +G+ IWD R K F + + +VL WN + S
Sbjct: 177 FISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVAS 236
Query: 339 DDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSLE 398
DD + L ++ S V F H+R + ++EW P ++S L ++DN+ WD +
Sbjct: 237 DDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTA 296
Query: 399 RDXXXXXXXXXXXXXLVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGMIVSTAADG 455
+LP G ++HW+ +IPG+I +++ DG
Sbjct: 297 EIVA-----------------ELP-------AGNNWNFDVHWYPKIPGVISASSFDG 329
>AT3G63460.3 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:23431009-23437241 REVERSE
LENGTH=1094
Length = 1094
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 27/237 (11%)
Query: 222 HKFKHKDEGYAIDWSPVVPGRLVSG--DCNNCIY-LWEPTSAATWNIDNAPFIGHTASVE 278
H HK ++++ + L SG D CI+ L +P+ + + + +
Sbjct: 117 HLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEIS 176
Query: 279 DLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGS 338
+ W+ + AS S +G+ IWD R K F + + +VL WN + S
Sbjct: 177 FISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVAS 236
Query: 339 DDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSLE 398
DD + L ++ S V F H+R + ++EW P ++S L ++DN+ WD +
Sbjct: 237 DDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTA 296
Query: 399 RDXXXXXXXXXXXXXLVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGMIVSTAADG 455
+LP G ++HW+ +IPG+I +++ DG
Sbjct: 297 EIVA-----------------ELP-------AGNNWNFDVHWYPKIPGVISASSFDG 329
>AT5G24520.2 | Symbols: TTG1, TTG | Transducin/WD40 repeat-like
superfamily protein | chr5:8371708-8372733 REVERSE
LENGTH=341
Length = 341
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 39/235 (16%)
Query: 232 AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNA----PFIGHTASVEDLQWSPTED 287
+ DW+ V P RL G C+ T+ W+I+ + I H V D+ W E
Sbjct: 137 SFDWNDVEPKRL--GTCS------IDTTCTIWDIEKSVVETQLIAHDKEVHDIAWG--EA 186
Query: 288 HVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVL--SWNRLAPCMLAS-GSDDGTIS 344
VFAS S DGS+ I+D R + +++ + D +L +WN+ +A+ D +
Sbjct: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
Query: 345 IRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSLERDXXXX 404
I D+R VA E H+ S+ +I W+P + +D Q IW+L
Sbjct: 247 ILDIR---SPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELP-------- 295
Query: 405 XXXXXXXXXLVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGMIVSTAADGFNIL 459
V P + P + ++ ++ +L W + P I A+ +L
Sbjct: 296 ---------TVAGPNGIDP--MSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLL 339
>AT5G24520.3 | Symbols: TTG1, TTG | Transducin/WD40 repeat-like
superfamily protein | chr5:8371708-8372733 REVERSE
LENGTH=341
Length = 341
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 39/235 (16%)
Query: 232 AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNA----PFIGHTASVEDLQWSPTED 287
+ DW+ V P RL G C+ T+ W+I+ + I H V D+ W E
Sbjct: 137 SFDWNDVEPKRL--GTCS------IDTTCTIWDIEKSVVETQLIAHDKEVHDIAWG--EA 186
Query: 288 HVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVL--SWNRLAPCMLAS-GSDDGTIS 344
VFAS S DGS+ I+D R + +++ + D +L +WN+ +A+ D +
Sbjct: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
Query: 345 IRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSLERDXXXX 404
I D+R VA E H+ S+ +I W+P + +D Q IW+L
Sbjct: 247 ILDIR---SPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELP-------- 295
Query: 405 XXXXXXXXXLVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGMIVSTAADGFNIL 459
V P + P + ++ ++ +L W + P I A+ +L
Sbjct: 296 ---------TVAGPNGIDP--MSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLL 339
>AT5G24520.1 | Symbols: TTG1, TTG, URM23, ATTTG1 | Transducin/WD40
repeat-like superfamily protein | chr5:8371708-8372733
REVERSE LENGTH=341
Length = 341
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 39/235 (16%)
Query: 232 AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNA----PFIGHTASVEDLQWSPTED 287
+ DW+ V P RL G C+ T+ W+I+ + I H V D+ W E
Sbjct: 137 SFDWNDVEPKRL--GTCS------IDTTCTIWDIEKSVVETQLIAHDKEVHDIAWG--EA 186
Query: 288 HVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVL--SWNRLAPCMLAS-GSDDGTIS 344
VFAS S DGS+ I+D R + +++ + D +L +WN+ +A+ D +
Sbjct: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
Query: 345 IRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSLERDXXXX 404
I D+R VA E H+ S+ +I W+P + +D Q IW+L
Sbjct: 247 ILDIR---SPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELP-------- 295
Query: 405 XXXXXXXXXLVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGMIVSTAADGFNIL 459
V P + P + ++ ++ +L W + P I A+ +L
Sbjct: 296 ---------TVAGPNGIDP--MSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLL 339
>AT3G26640.1 | Symbols: LWD2 | Transducin/WD40 repeat-like
superfamily protein | chr3:9793276-9794316 FORWARD
LENGTH=346
Length = 346
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 232 AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVFA 291
+ DW+ P R+ + + +W+ + I H V D+ W VFA
Sbjct: 140 SFDWNEAEPRRIGTSSIDTTCTIWDIEREVV----DTQLIAHDKEVYDIAWGGV--GVFA 193
Query: 292 SCSVDGSIAIWDTRLGKSPAAFFKAHKADVNV--LSWNRLAPCMLAS---GSDDGTISIR 346
S S DGS+ ++D R + +++ + + LSWN+ P +A+ GS I +
Sbjct: 194 SVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGS--AKIVVL 251
Query: 347 DLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLS 396
D+R V + H+ S+ +I W+PH +S + + +D+Q IWD+S
Sbjct: 252 DIRFPALP---VVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDIS 298
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 26/245 (10%)
Query: 163 THEGCVNRIRSMTQNPHICATWADTGHVQIWDMSSHLNS-----LAETETGAQGVAAVFN 217
TH G S++ + + A +++WDM+ + AE ++ Q +
Sbjct: 351 THNGL--NCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGR 408
Query: 218 QVPLHKFKHKDEGYAIDWSPVVPGRLV-SGDCNNCIYLWEPTSAATWNIDNAPFIGHTAS 276
+ H Y+ +SP PG V S + I LW + N + + GH
Sbjct: 409 RSYTLLLGHSGPVYSATFSP--PGDFVLSSSADTTIRLW----STKLNANLVCYKGHNYP 462
Query: 277 VEDLQWSPTEDHVFASCSVDGSIAIWDT-RLGKSPAAFFKAHKADVNVLSWNRLAPC-ML 334
V D Q+SP H FASCS D + IW R+ P H +DV+ + W+ C +
Sbjct: 463 VWDAQFSPF-GHYFASCSHDRTARIWSMDRI--QPLRIMAGHLSDVDCVQWH--PNCNYI 517
Query: 335 ASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWD 394
A+GS D T+ + D+ + V F H+ + S+ SP + +A ED + +WD
Sbjct: 518 ATGSSDKTVRLWDV----QTGECVRIFIGHRSMVLSLAMSP-DGRYMASGDEDGTIMMWD 572
Query: 395 LSLER 399
LS R
Sbjct: 573 LSTAR 577
>AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16479266 REVERSE LENGTH=372
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
Query: 219 VPLHKFKHKDEGY--AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPF-IGHTA 275
VP+ + GY + P L++ + LW+ T+ ++ F GHTA
Sbjct: 141 VPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTA 200
Query: 276 SVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAP--CM 333
V + S + + F S S D + +WDTR F H+ DVN + + P
Sbjct: 201 DVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTV---KFFPDGYR 257
Query: 334 LASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIW 393
+GSDDGT + D+R + H + +TSI +S A + +N +W
Sbjct: 258 FGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVW 317
Query: 394 DLSL 397
D L
Sbjct: 318 DTLL 321
>AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16479266 REVERSE LENGTH=377
Length = 377
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
Query: 219 VPLHKFKHKDEGY--AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPF-IGHTA 275
VP+ + GY + P L++ + LW+ T+ ++ F GHTA
Sbjct: 146 VPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTA 205
Query: 276 SVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAP--CM 333
V + S + + F S S D + +WDTR F H+ DVN + + P
Sbjct: 206 DVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTV---KFFPDGYR 262
Query: 334 LASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIW 393
+GSDDGT + D+R + H + +TSI +S A + +N +W
Sbjct: 263 FGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVW 322
Query: 394 DLSL 397
D L
Sbjct: 323 DTLL 326
>AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477393-16478769 REVERSE LENGTH=315
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
Query: 219 VPLHKFKHKDEGY--AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPF-IGHTA 275
VP+ + GY + P L++ + LW+ T+ ++ F GHTA
Sbjct: 84 VPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTA 143
Query: 276 SVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAP--CM 333
V + S + + F S S D + +WDTR F H+ DVN + + P
Sbjct: 144 DVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTV---KFFPDGYR 200
Query: 334 LASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIW 393
+GSDDGT + D+R + H + +TSI +S A + +N +W
Sbjct: 201 FGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVW 260
Query: 394 DLSL 397
D L
Sbjct: 261 DTLL 264
>AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein
beta 1 | chr4:16477586-16479266 REVERSE LENGTH=347
Length = 347
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
Query: 219 VPLHKFKHKDEGY--AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPF-IGHTA 275
VP+ + GY + P L++ + LW+ T+ ++ F GHTA
Sbjct: 146 VPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTA 205
Query: 276 SVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAP--CM 333
V + S + + F S S D + +WDTR F H+ DVN + + P
Sbjct: 206 DVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTV---KFFPDGYR 262
Query: 334 LASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIW 393
+GSDDGT + D+R + H + +TSI +S A + +N +W
Sbjct: 263 FGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVW 322
Query: 394 DLSL 397
D L
Sbjct: 323 DTLL 326
>AT4G18900.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:10356465-10359078 FORWARD LENGTH=461
Length = 461
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 273 HTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPC 332
HT SV L W+ ++ AS S D + +WD G + H +V ++WN AP
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITM-EHHTKEVQAVAWNHYAPE 290
Query: 333 MLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRS-ITSIEWSPHEASSLAVSSEDNQLT 391
+L SGS D T+ ++D R + F++ S + S+ W PH S VS ED +
Sbjct: 291 VLLSGSFDQTVVLKDGRQPSH-----SGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVK 345
Query: 392 IWDL 395
+D+
Sbjct: 346 GFDV 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 20/179 (11%)
Query: 226 HKDEGYAIDWSPVVPGRLVSGDCNNCIYL---WEPT-SAATWNIDNAPFIGHTASVEDLQ 281
H E A+ W+ P L+SG + + L +P+ S W++ + VE L
Sbjct: 275 HTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDGRQPSHSGFKWSV--------MSDVESLA 326
Query: 282 WSPTEDHVFASCSVDGSIAIWDTRLGK------SPAAFFKAHKADVNVLSWNRLAPCMLA 335
W P +H F DG++ +D R +P+ H +S+N AP +LA
Sbjct: 327 WDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNLLA 386
Query: 336 SGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWD 394
+GS D T+ + DL S +A + + I +SP LA+ +L +WD
Sbjct: 387 TGSKDRTVKLWDLS--NNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWD 443
>AT4G18905.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:10360234-10362991 FORWARD LENGTH=504
Length = 504
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 273 HTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPC 332
HT SV L W+ ++ AS S D + +WD G + H +V ++WN AP
Sbjct: 274 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITM-EHHTKEVQAVAWNHYAPE 332
Query: 333 MLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRS-ITSIEWSPHEASSLAVSSEDNQLT 391
+L SGS D T+ ++D R + F++ S + S+ W PH S VS ED +
Sbjct: 333 VLLSGSFDQTVVMKDGRQPSH-----SGFKWSVMSDVESLAWDPHCEHSFVVSLEDGTVK 387
Query: 392 IWDL 395
+D+
Sbjct: 388 GFDI 391
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 23/188 (12%)
Query: 226 HKDEGYAIDWSPVVPGRLVSGDCNNCIYL---WEPT-SAATWNIDNAPFIGHTASVEDLQ 281
H E A+ W+ P L+SG + + + +P+ S W++ + VE L
Sbjct: 317 HTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDGRQPSHSGFKWSV--------MSDVESLA 368
Query: 282 WSPTEDHVFASCSVDGSIAIWDTRLGKS-------PAAFFKAHKAD--VNVLSWNRLAPC 332
W P +H F DG++ +D R +S P +AH D V+ +S+N P
Sbjct: 369 WDPHCEHSFVVSLEDGTVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRGVSSISYNISTPN 428
Query: 333 MLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTI 392
+LA+GS D ++ + DL S +A + + ++ SI ++ LA+ +L +
Sbjct: 429 LLATGSMDKSVKLWDLS--NNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGELHV 486
Query: 393 WDLSLERD 400
WD L+ +
Sbjct: 487 WDTLLDAN 494
>AT4G18905.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:10360234-10362991 FORWARD LENGTH=494
Length = 494
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 273 HTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPC 332
HT SV L W+ ++ AS S D + +WD G + H +V ++WN AP
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITM-EHHTKEVQAVAWNHYAPE 322
Query: 333 MLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRS-ITSIEWSPHEASSLAVSSEDNQLT 391
+L SGS D T+ ++D R + F++ S + S+ W PH S VS ED +
Sbjct: 323 VLLSGSFDQTVVMKDGRQPSH-----SGFKWSVMSDVESLAWDPHCEHSFVVSLEDGTVK 377
Query: 392 IWDL 395
+D+
Sbjct: 378 GFDI 381
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 23/188 (12%)
Query: 226 HKDEGYAIDWSPVVPGRLVSGDCNNCIYL---WEPT-SAATWNIDNAPFIGHTASVEDLQ 281
H E A+ W+ P L+SG + + + +P+ S W++ + VE L
Sbjct: 307 HTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDGRQPSHSGFKWSV--------MSDVESLA 358
Query: 282 WSPTEDHVFASCSVDGSIAIWDTRLGKS-------PAAFFKAHKAD--VNVLSWNRLAPC 332
W P +H F DG++ +D R +S P +AH D V+ +S+N P
Sbjct: 359 WDPHCEHSFVVSLEDGTVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRGVSSISYNISTPN 418
Query: 333 MLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTI 392
+LA+GS D ++ + DL S +A + + ++ SI ++ LA+ +L +
Sbjct: 419 LLATGSMDKSVKLWDLS--NNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGELHV 476
Query: 393 WDLSLERD 400
WD L+ +
Sbjct: 477 WDTLLDAN 484
>AT1G18830.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:6489309-6494218 FORWARD LENGTH=969
Length = 969
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 37/237 (15%)
Query: 225 KHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWE---PTSAATWNIDNAPFIGHTASVEDLQ 281
KHK ++++ P +L SG + + +W+ P+ + + ++ + + L
Sbjct: 113 KHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYM--QSEISSLS 170
Query: 282 WSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWN--RLAPCMLASGSD 339
W+ HV AS S +G+ IWD K + +VL W+ ++AS D
Sbjct: 171 WNKGFQHVLASTSHNGTTVIWDVNNEKIITDLKTTVR--CSVLQWDPDHFNQILVASDED 228
Query: 340 DG-TISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSLE 398
+ + D+R L+ S V F H+R + ++EW P ++ L +DN+ W+
Sbjct: 229 SSPNVKLLDIRYLQ---SPVRTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTG 285
Query: 399 RDXXXXXXXXXXXXXLVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGMIVSTAADG 455
+ +LP GQ ++HW+ ++PG+I +++ DG
Sbjct: 286 KIVA-----------------ELP-------TGQNWNFDVHWYPKMPGVISASSVDG 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 287 DHVFASCSVDGSIAIWDTRLGKSPAAF----FKAHKADVNVLSWNRLAPCMLASGSDDGT 342
D + A VDG+I +W+ +S HK V L +N +P LASG+DDGT
Sbjct: 80 DGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGT 139
Query: 343 ISIRDLRLLKEGDSVVAHF-----EYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSL 397
+ I DL S +H+ Y + I+S+ W+ LA +S + IWD++
Sbjct: 140 VCIWDL----ANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDVNN 195
Query: 398 ER 399
E+
Sbjct: 196 EK 197
>AT4G35370.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:16815138-16817504 FORWARD LENGTH=433
Length = 433
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 226 HKDEGYAIDWSPVVPGRLVSGDCNNCIYLWE----PTSAATWNIDNAPFIGHTASVEDLQ 281
H+ + +A+ W+ P L+SG + + L + S W+ + A VE L
Sbjct: 258 HEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSGLKWSTE--------AKVEKLA 309
Query: 282 WSPTEDHVFASCSVDGSIAIWDTRLGK-SPAAFFKAHKADVNVLSWNRLAPCMLASGSDD 340
W P +H F DG++ +DTR SP+ AH ++V+ +S+N AP +LA+GS D
Sbjct: 310 WDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPNLLATGSAD 369
Query: 341 GTISIRDL 348
++ + DL
Sbjct: 370 ESVKLWDL 377
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 29/183 (15%)
Query: 273 HTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPC 332
HT V DL W+ ++ AS S D + +WD GK + H+ V+ ++WN P
Sbjct: 215 HTGPVIDLAWNKEFRNIVASGSEDKKVKVWDVATGKCKVTM-EHHEKKVHAVAWNNYTPE 273
Query: 333 MLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRS-ITSIEWSPHEASSLAVSSEDNQLT 391
+L SGS D T+ ++D R D + ++ + + + W PH S VS +D +
Sbjct: 274 VLLSGSRDRTVVLKDGR-----DPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVK 328
Query: 392 IWDLSLERDXXXXXXXXXXXXXLVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGMIVST 451
+D DL P + IH ++ + ++ P ++ +
Sbjct: 329 GFD---------------------TRASDLSPSFI-IHAHDSEVSSISYNIHAPNLLATG 366
Query: 452 AAD 454
+AD
Sbjct: 367 SAD 369
>AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331506 REVERSE LENGTH=653
Length = 653
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 258 TSAATWN----IDNAPFIGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAF 313
T+ W+ +D + GH V+ + W PT+ + S D + +WDTR G+ +
Sbjct: 235 TTVKVWDFTKCVDESSLTGHGWDVKSVDWHPTKS-LLVSGGKDQLVKLWDTRSGRELCSL 293
Query: 314 FKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEW 373
HK V + WN+ +L + S D I + D+R +KE S F H + +TS+ W
Sbjct: 294 -HGHKNIVLSVKWNQNGNWLL-TASKDQIIKLYDIRTMKELQS----FRGHTKDVTSLAW 347
Query: 374 SPHEASSLAVSSEDNQLTIWDLSLE 398
P S D + W + E
Sbjct: 348 HPCHEEYFVSGSSDGSICHWIVGHE 372
>AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331557 REVERSE LENGTH=647
Length = 647
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 258 TSAATWN----IDNAPFIGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAF 313
T+ W+ +D + GH V+ + W PT+ + S D + +WDTR G+ +
Sbjct: 229 TTVKVWDFTKCVDESSLTGHGWDVKSVDWHPTKS-LLVSGGKDQLVKLWDTRSGRELCSL 287
Query: 314 FKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEW 373
HK V + WN+ +L + S D I + D+R +KE + F H + +TS+ W
Sbjct: 288 -HGHKNIVLSVKWNQNGNWLLTA-SKDQIIKLYDIRTMKE----LQSFRGHTKDVTSLAW 341
Query: 374 SPHEASSLAVSSEDNQLTIWDLSLE 398
P S D + W + E
Sbjct: 342 HPCHEEYFVSGSSDGSICHWIVGHE 366
>AT4G22910.1 | Symbols: FZR2, CCS52A1 | FIZZY-related 2 |
chr4:12012743-12015663 FORWARD LENGTH=483
Length = 483
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 233 IDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVFAS 292
+DWS +++ NC+YLW S+ + + +G SV + W+ H+
Sbjct: 182 VDWSAQ---NVLAVGLGNCVYLWNACSSKVTKLCD---LGAEDSVCSVGWALRGTHLAVG 235
Query: 293 CSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLLK 352
S G + IWD K + H+ V L+W +L+SGS D +I RD+R +
Sbjct: 236 TST-GKVQIWDASRCKRTRT-MEGHRLRVGALAW---GSSVLSSGSRDKSILQRDIRCQE 290
Query: 353 EGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWD 394
+ V+ HK + ++WS ++ LA DN+L +W+
Sbjct: 291 DH---VSKLAGHKSEVCGLKWS-YDNRELASGGNDNRLFVWN 328
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
LENGTH=473
Length = 473
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 240 PGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVFASCSVDGSI 299
P RLVSG + ++LWEP+ + GH V + +SP + AS S D S+
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ---PKKRLTGHQQLVNHVYFSP-DGKWIASASFDKSV 384
Query: 300 AIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLLKEGDSVVA 359
+W+ G+ F+ H V +SW+ + +L SGS D T+ I ++R K +
Sbjct: 385 RLWNGITGQF-VTVFRGHVGPVYQVSWSADSRLLL-SGSKDSTLKIWEIRTKKLKQDLPG 442
Query: 360 HFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIW 393
H + + +++WSP + + +D L +W
Sbjct: 443 HAD----EVFAVDWSP-DGEKVVSGGKDRVLKLW 471
>AT5G13840.2 | Symbols: FZR3 | FIZZY-related 3 |
chr5:4468677-4470706 REVERSE LENGTH=481
Length = 481
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 227 KDEGY--AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQWSP 284
+D+ Y +DWS +++ C+YLW +A+ + +G SV +QW+
Sbjct: 172 QDDFYLNVVDWSSQ---NVLAVGLGTCVYLW---TASNSKVTKLCDLGPNDSVCSVQWTR 225
Query: 285 TEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTIS 344
++ S G + +WD K H+ VL+WN +L+SGS D I
Sbjct: 226 EGSYISIGTS-HGQVQVWDGTQCKR-VRTMGGHQTRTGVLAWNSR---ILSSGSRDRNIL 280
Query: 345 IRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWD 394
D+R+ + V+ HK + ++WS H+ LA DNQL +W+
Sbjct: 281 QHDIRVQSD---FVSKLVGHKSEVCGLKWS-HDDRELASGGNDNQLLVWN 326
>AT5G13840.1 | Symbols: FZR3 | FIZZY-related 3 |
chr5:4468677-4470706 REVERSE LENGTH=481
Length = 481
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 227 KDEGY--AIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQWSP 284
+D+ Y +DWS +++ C+YLW +A+ + +G SV +QW+
Sbjct: 172 QDDFYLNVVDWSSQ---NVLAVGLGTCVYLW---TASNSKVTKLCDLGPNDSVCSVQWTR 225
Query: 285 TEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTIS 344
++ S G + +WD K H+ VL+WN +L+SGS D I
Sbjct: 226 EGSYISIGTS-HGQVQVWDGTQCKR-VRTMGGHQTRTGVLAWNSR---ILSSGSRDRNIL 280
Query: 345 IRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWD 394
D+R+ + V+ HK + ++WS H+ LA DNQL +W+
Sbjct: 281 QHDIRVQSD---FVSKLVGHKSEVCGLKWS-HDDRELASGGNDNQLLVWN 326
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 16/157 (10%)
Query: 241 GRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVFASCSVDGSIA 300
G + +G + I LW+ A GH ++ + + P + FAS S+D ++
Sbjct: 72 GLVAAGAASGTIKLWDLEEAKVVRT----LTGHRSNCVSVNFHPFGE-FFASGSLDTNLK 126
Query: 301 IWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCM--LASGSDDGTISIRDLRLLKEGDSVV 358
IWD R K +K H VNVL R P + SG +D + + DL K ++
Sbjct: 127 IWDIR-KKGCIHTYKGHTRGVNVL---RFTPDGRWIVSGGEDNVVKVWDLTAGK----LL 178
Query: 359 AHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDL 395
F+ H+ I S+++ PHE LA S D + WDL
Sbjct: 179 HEFKSHEGKIQSLDFHPHEF-LLATGSADKTVKFWDL 214
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 162 VTHEGCVNRIRSMTQNPHICATWADTGHVQIWDMSSHLNSLAETETGAQGVAAVFNQVPL 221
V H VN ++ ++ + T + V +W + N++ + G+ +V
Sbjct: 13 VAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP-NAILSLYGHSSGIDSV------ 65
Query: 222 HKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQ 281
D S V+ + +G + I LW+ A GH ++ +
Sbjct: 66 ----------TFDASEVL---VAAGAASGTIKLWDLEEAKIVRT----LTGHRSNCISVD 108
Query: 282 WSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCM--LASGSD 339
+ P + FAS S+D ++ IWD R K +K H VNVL R P + SG +
Sbjct: 109 FHPFGE-FFASGSLDTNLKIWDIR-KKGCIHTYKGHTRGVNVL---RFTPDGRWVVSGGE 163
Query: 340 DGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDL 395
D + + DL K ++ F+ H+ I S+++ PHE LA S D + WDL
Sbjct: 164 DNIVKVWDLTAGK----LLTEFKSHEGQIQSLDFHPHEF-LLATGSADRTVKFWDL 214
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 162 VTHEGCVNRIRSMTQNPHICATWADTGHVQIWDMSSHLNSLAETETGAQGVAAVFNQVPL 221
V H VN ++ ++ + T + V +W + N++ + G+ +V
Sbjct: 13 VAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP-NAILSLYGHSSGIDSV------ 65
Query: 222 HKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQ 281
D S V+ + +G + I LW+ A GH ++ +
Sbjct: 66 ----------TFDASEVL---VAAGAASGTIKLWDLEEAKIVRT----LTGHRSNCISVD 108
Query: 282 WSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCM--LASGSD 339
+ P + FAS S+D ++ IWD R K +K H VNVL R P + SG +
Sbjct: 109 FHPFGE-FFASGSLDTNLKIWDIR-KKGCIHTYKGHTRGVNVL---RFTPDGRWVVSGGE 163
Query: 340 DGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDL 395
D + + DL K ++ F+ H+ I S+++ PHE LA S D + WDL
Sbjct: 164 DNIVKVWDLTAGK----LLTEFKSHEGQIQSLDFHPHEF-LLATGSADRTVKFWDL 214
>AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein |
chr5:26857268-26860974 FORWARD LENGTH=613
Length = 613
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 225 KHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQWSP 284
KHK +++ W+ L++G + +W+ A W F H+ D+ W
Sbjct: 363 KHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWD-VKAEEWK---QQFEFHSGPTLDVDWR- 416
Query: 285 TEDHVFASCSVDGSIAIWDTRLGKS-PAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTI 343
+ FA+ S D I + ++G++ PA F H+ +VN + W+ +LAS SDD T
Sbjct: 417 -NNVSFATSSTDSMIYL--CKIGETRPAKTFTGHQGEVNCVKWDPTGS-LLASCSDDSTA 472
Query: 344 SIRDLRLLKEGDSVVAHFEYHKRSITSIEWS--------PHEASSLAVSSEDNQLTIWDL 395
I +++ + V H + I +I WS P++ +LA +S D+ + +WD
Sbjct: 473 KIWNIKQ----STFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDA 528
Query: 396 SLER 399
L +
Sbjct: 529 ELGK 532
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 250 NCIYLWEPT-----------SAATWNIDNAPFI----GHTASVEDLQWSPT--------E 286
NC+ W+PT +A WNI + F+ HT + ++WSPT +
Sbjct: 452 NCVK-WDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNK 510
Query: 287 DHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIR 346
AS S D ++ +WD LGK + F H+ V L+++ +ASGS D +I I
Sbjct: 511 QLTLASASFDSTVKLWDAELGKMLCS-FNGHREPVYSLAFSPNGE-YIASGSLDKSIHIW 568
Query: 347 DLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSL 397
+KEG V + I + W+ E + +A DN + + D +
Sbjct: 569 S---IKEGKIVKTY--TGNGGIFEVCWNK-EGNKIAACFADNSVCVLDFRM 613
>AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:18134272-18135303 REVERSE LENGTH=343
Length = 343
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 74/190 (38%), Gaps = 58/190 (30%)
Query: 244 VSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVFASCSVDGSIAIWD 303
V GDC N + L GH ++ DL W+ ++ S S D ++ WD
Sbjct: 82 VHGDCKNFMVL----------------KGHKNAILDLHWT-SDGSQIVSASPDKTVRAWD 124
Query: 304 TRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRL------------- 350
GK + H + VN R P ++ SGSDDGT + D+R
Sbjct: 125 VETGKQIKKMAE-HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQI 183
Query: 351 -------------------------LKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSS 385
L++G++ + E H+ +IT + SP + S L +
Sbjct: 184 TAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT-LEGHQDTITGMSLSP-DGSYLLTNG 241
Query: 386 EDNQLTIWDL 395
DN+L +WD+
Sbjct: 242 MDNKLCVWDM 251
>AT2G30050.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:12825540-12826448 FORWARD
LENGTH=302
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 24/149 (16%)
Query: 268 APFIGHTASVEDLQWS-PTEDHVFASCSVDGSIAIWD--TRLGKSPAAFFKAHKADVNVL 324
A GH V ++ W+ P + ASCS DG + +W + + F HK+ VN +
Sbjct: 50 ATLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSI 109
Query: 325 SWNRLAP----CMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASS 380
+W AP LA GS DG IS+ R D+ + H +TS+ W+P A
Sbjct: 110 AW---APHDIGLSLACGSSDGNISVFTARADGGWDTSRID-QAHPVGVTSVSWAPATAPG 165
Query: 381 LAVSSE-------------DNQLTIWDLS 396
VSS DN + +W L+
Sbjct: 166 ALVSSGLLDPVYKLASGGCDNTVKVWKLA 194
>AT5G27570.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:9734896-9736131 REVERSE LENGTH=411
Length = 411
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 272 GHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAP 331
GH + V L W+ +H+ + +DG I D R+ S + H +V L W+
Sbjct: 175 GHESRVGSLAWN---NHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGK 231
Query: 332 CMLASGSDDGTISIRDLRLLKEGDSV---VAHFEYHKRSITSIEWSPHEASSLAVSS--E 386
LASG +D + I D R + + + FE H ++ ++ W P +AS LA
Sbjct: 232 -KLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVG 290
Query: 387 DNQLTIWD 394
D ++ W+
Sbjct: 291 DGKIKFWN 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 233 IDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVFAS 292
+DW + GD +YLW+ +S +T+ + V + W T+D + +
Sbjct: 98 LDWGSSNVLAIALGDT---VYLWDASSGSTYKL--VTIDEEEGPVTSINW--TQDGLDLA 150
Query: 293 CSVDGS-IAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLL 351
+D S + +WD + H++ V L+WN +L +G DG I D+R+
Sbjct: 151 IGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWNN---HILTTGGMDGKIVNNDVRIR 207
Query: 352 KEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWD 394
S+V + H + ++WS LA DN + IWD
Sbjct: 208 S---SIVETYLGHTEEVCGLKWS-ESGKKLASGGNDNVVHIWD 246
>AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1179
Length = 1179
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 243 LVSGDCNNCIYLW---EPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVFASCSVDGSI 299
++G + + LW +PTS + GHT++V+ + + E V A S G I
Sbjct: 31 FITGGDDYKVNLWAIGKPTSLMS-------LCGHTSAVDSVAFDSAEVLVLAGAS-SGVI 82
Query: 300 AIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLLKEGDSVVA 359
+WD K AF H+++ + + ++ LASGS D + I D+R K+G +
Sbjct: 83 KLWDVEEAKMVRAF-TGHRSNCSAVEFHPFGE-FLASGSSDANLKIWDIR--KKG--CIQ 136
Query: 360 HFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLS 396
++ H R I++I ++P + + DN + +WDL+
Sbjct: 137 TYKGHSRGISTIRFTP-DGRWVVSGGLDNVVKVWDLT 172
>AT1G29260.1 | Symbols: PEX7, ATPEX7 | peroxin 7 |
chr1:10224923-10225876 FORWARD LENGTH=317
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 12/180 (6%)
Query: 224 FKHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPFIGHTAS------V 277
FK GY++ +SP RL N L AP + + S V
Sbjct: 4 FKAPFNGYSVKFSPFYESRLAVATAQNFGILGNGRIHVLELAPGAPGVTESVSYDTADAV 63
Query: 278 EDLQWSPTEDHVFASCSVDGSIAIWDTRL--GKSPAAFFKAHKADVNVLSWNRLAPCMLA 335
D+ WS + D V + DGS+ I+DT L +P F+ H +V + +N
Sbjct: 64 YDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFL 123
Query: 336 SGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDL 395
+ S D T+ + + + + V F+ H + W+P A +S D L IWD+
Sbjct: 124 TSSWDDTVKLWAM----DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDV 179
>AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1181
Length = 1181
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 243 LVSGDCNNCIYLW---EPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVFASCSVDGSI 299
++G + + LW +PTS + GHT++V+ + + E V A S G I
Sbjct: 31 FITGGDDYKVNLWAIGKPTSLMS-------LCGHTSAVDSVAFDSAEVLVLAGAS-SGVI 82
Query: 300 AIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLLKEGDSVVA 359
+WD K AF H+++ + + ++ LASGS D + I D+R K+G +
Sbjct: 83 KLWDVEEAKMVRAF-TGHRSNCSAVEFHPFGE-FLASGSSDANLKIWDIR--KKG--CIQ 136
Query: 360 HFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLS 396
++ H R I++I ++P + + DN + +WDL+
Sbjct: 137 TYKGHSRGISTIRFTP-DGRWVVSGGLDNVVKVWDLT 172
>AT1G79990.5 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=912
Length = 912
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 17/191 (8%)
Query: 215 VFNQVPLHKFK----HKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPF 270
V+N + K K H D + P +P L S D + I LW+ W + F
Sbjct: 83 VYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSD-DMLIKLWDWEKG--W-LCTQIF 138
Query: 271 IGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGK-SPAAFFKAHKADVNVLSWNRL 329
GH+ V + ++P + + FAS S+D +I IW+ LG P AH VN + +
Sbjct: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN--LGSPDPNFTLDAHLKGVNCVDYFTG 196
Query: 330 A-PCMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDN 388
L +GSDD T + D + S V E H +++++ + P E + SED
Sbjct: 197 GDKPYLITGSDDHTAKVWDY----QTKSCVQTLEGHTHNVSAVSFHP-ELPIIITGSEDG 251
Query: 389 QLTIWDLSLER 399
+ IW + R
Sbjct: 252 TVRIWHATTYR 262
>AT1G79990.3 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=920
Length = 920
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 17/191 (8%)
Query: 215 VFNQVPLHKFK----HKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPF 270
V+N + K K H D + P +P L S D + I LW+ W + F
Sbjct: 83 VYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSD-DMLIKLWDWEKG--W-LCTQIF 138
Query: 271 IGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGK-SPAAFFKAHKADVNVLSWNRL 329
GH+ V + ++P + + FAS S+D +I IW+ LG P AH VN + +
Sbjct: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN--LGSPDPNFTLDAHLKGVNCVDYFTG 196
Query: 330 A-PCMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDN 388
L +GSDD T + D + S V E H +++++ + P E + SED
Sbjct: 197 GDKPYLITGSDDHTAKVWDY----QTKSCVQTLEGHTHNVSAVSFHP-ELPIIITGSEDG 251
Query: 389 QLTIWDLSLER 399
+ IW + R
Sbjct: 252 TVRIWHATTYR 262
>AT1G79990.1 | Symbols: | structural molecules |
chr1:30084522-30091949 FORWARD LENGTH=1135
Length = 1135
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 17/191 (8%)
Query: 215 VFNQVPLHKFK----HKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPTSAATWNIDNAPF 270
V+N + K K H D + P +P L S D + I LW+ W + F
Sbjct: 298 VYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSD-DMLIKLWDWEKG--W-LCTQIF 353
Query: 271 IGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGK-SPAAFFKAHKADVNVLSWNRL 329
GH+ V + ++P + + FAS S+D +I IW+ LG P AH VN + +
Sbjct: 354 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN--LGSPDPNFTLDAHLKGVNCVDYFTG 411
Query: 330 A-PCMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDN 388
L +GSDD T + D + S V E H +++++ + P E + SED
Sbjct: 412 GDKPYLITGSDDHTAKVWDY----QTKSCVQTLEGHTHNVSAVSFHP-ELPIIITGSEDG 466
Query: 389 QLTIWDLSLER 399
+ IW + R
Sbjct: 467 TVRIWHATTYR 477
>AT5G27945.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:9976007-9977601 FORWARD LENGTH=428
Length = 428
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 272 GHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAP 331
GH + V L W+ +H+ + +DG I D R+ S + H +V L W+
Sbjct: 193 GHESRVGSLAWN---NHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGK 249
Query: 332 CMLASGSDDGTISIRDLRLLKEGDSV--VAHFEYHKRSITSIEWSPHEASSLAVSS--ED 387
LASG +D + I D L + + FE H ++ ++ W P +AS LA D
Sbjct: 250 -KLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGD 308
Query: 388 NQLTIWD 394
++ W+
Sbjct: 309 GKINFWN 315
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 22/154 (14%)
Query: 250 NCIYLWEPTSAATWNI-----DNAPFIGHTASVEDLQWSPTEDHVFASCSVDGS-IAIWD 303
+ +YLW+ +S T + +N P V + W T+D + + +D S + +WD
Sbjct: 130 DTVYLWDASSCYTSKLVTIDDENGP-------VTSINW--TQDGLDLAVGLDNSEVQVWD 180
Query: 304 TRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLLKEGDSVVAHFEY 363
+ H++ V L+WN +L +G DG I D+R+ S++ +
Sbjct: 181 CVSNRHVRTLRGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRIRS---SIIGTYVG 234
Query: 364 HKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSL 397
H + ++WS LA DN + IWD SL
Sbjct: 235 HTEEVCGLKWS-ESGKKLASGGNDNVVHIWDRSL 267
>AT4G33260.1 | Symbols: CDC20.2 | Transducin family protein / WD-40
repeat family protein | chr4:16041233-16043180 REVERSE
LENGTH=447
Length = 447
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 232 AIDWSPVVPGRLVSGDCNNC-IYLWEPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVF 290
+I+W+P GR V+ NN + LW+ S GH + V L W+ +H+
Sbjct: 177 SINWAP--DGRHVAVGLNNSEVQLWDSASNRQLRTLKG---GHQSRVGSLAWN---NHIL 228
Query: 291 ASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRL 350
+ +DG I D R+ ++ H +V L W+ + LASG +D + I D +
Sbjct: 229 TTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSG-SGQQLASGGNDNVVHIWDRSV 287
Query: 351 LKEGDSV--VAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTI 392
+ + E H ++ ++ W P +A+ LA TI
Sbjct: 288 ASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTI 331
>AT4G33270.1 | Symbols: CDC20.1 | Transducin family protein / WD-40
repeat family protein | chr4:16044545-16046590 REVERSE
LENGTH=457
Length = 457
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 232 AIDWSPVVPGRLVSGDCNNC-IYLWEPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVF 290
+I+W+P GR V+ NN + LW+ S GH + V L W+ +H+
Sbjct: 187 SINWAP--DGRHVAVGLNNSEVQLWDSASNRQLRTLKG---GHQSRVGSLAWN---NHIL 238
Query: 291 ASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRL 350
+ +DG I D R+ ++ H +V L W+ + LASG +D + I D +
Sbjct: 239 TTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSG-SGQQLASGGNDNVVHIWDRSV 297
Query: 351 LKEGDSV--VAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTI 392
+ + E H ++ ++ W P +A+ LA TI
Sbjct: 298 ASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTI 341
>AT3G21540.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:7586100-7590856 REVERSE LENGTH=955
Length = 955
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 296 DGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLLKEGD 355
DGSI IWDT G F +HK V L +N++ MLASGS D I + D+ G+
Sbjct: 85 DGSIRIWDTEKGTCEVN-FNSHKGAVTALRYNKVGS-MLASGSKDNDIILWDVV----GE 138
Query: 356 SVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDL 395
S + H+ +T + + L SS+D L +WDL
Sbjct: 139 SGLFRLRGHRDQVTDLVF-LDGGKKLVSSSKDKFLRVWDL 177
>AT4G33260.2 | Symbols: CDC20.2 | Transducin family protein / WD-40
repeat family protein | chr4:16041195-16043180 REVERSE
LENGTH=441
Length = 441
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 232 AIDWSPVVPGRLVSGDCNNC-IYLWEPTSAATWNIDNAPFIGHTASVEDLQWSPTEDHVF 290
+I+W+P GR V+ NN + LW+ S GH + V L W+ +H+
Sbjct: 177 SINWAP--DGRHVAVGLNNSEVQLWDSASNRQLRTLKG---GHQSRVGSLAWN---NHIL 228
Query: 291 ASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRL 350
+ +DG I D R+ ++ H +V L W+ LASG +D + I D +
Sbjct: 229 TTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQ-QLASGGNDNVVHIWDRSV 287
Query: 351 LKEGDSV--VAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTI 392
+ + E H ++ ++ W P +A+ LA TI
Sbjct: 288 ASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTI 331
>AT1G52360.1 | Symbols: | Coatomer, beta' subunit |
chr1:19499282-19505397 FORWARD LENGTH=926
Length = 926
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 215 VFNQVPLHKFK----HKDEGYAIDWSPVVPGRLVSGDCNNCIYLW--EPTSAATWNIDNA 268
V+N + K K H D + P +P L S D + I LW E A T
Sbjct: 83 VYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD-DMLIKLWDWEKGWACT-----Q 136
Query: 269 PFIGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGK-SPAAFFKAHKADVNVLSWN 327
F GH+ V + ++P + + FAS S+D +I IW+ LG P AH+ VN + +
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN--LGSPDPNFTLDAHQKGVNCVDYF 194
Query: 328 RLAPC-MLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSE 386
L +GSDD T + D + S V E H +++++ + P E + SE
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDY----QTKSCVQTLEGHTHNVSAVCFHP-ELPIIITGSE 249
Query: 387 DNQLTIWDLSLER 399
D + IW + R
Sbjct: 250 DGTVRIWHATTYR 262
>AT1G52360.2 | Symbols: | Coatomer, beta' subunit |
chr1:19499420-19505397 FORWARD LENGTH=970
Length = 970
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 215 VFNQVPLHKFK----HKDEGYAIDWSPVVPGRLVSGDCNNCIYLW--EPTSAATWNIDNA 268
V+N + K K H D + P +P L S D + I LW E A T
Sbjct: 127 VYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD-DMLIKLWDWEKGWACT-----Q 180
Query: 269 PFIGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGK-SPAAFFKAHKADVNVLSWN 327
F GH+ V + ++P + + FAS S+D +I IW+ LG P AH+ VN + +
Sbjct: 181 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN--LGSPDPNFTLDAHQKGVNCVDYF 238
Query: 328 RLAPC-MLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSE 386
L +GSDD T + D + S V E H +++++ + P E + SE
Sbjct: 239 TGGDKPYLITGSDDHTAKVWDY----QTKSCVQTLEGHTHNVSAVCFHP-ELPIIITGSE 293
Query: 387 DNQLTIWDLSLER 399
D + IW + R
Sbjct: 294 DGTVRIWHATTYR 306
>AT5G26900.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr5:9463752-9465086 FORWARD LENGTH=444
Length = 444
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 272 GHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAP 331
GH + V L W ++H+ + +DG I D R+ S + H +V L W+ +
Sbjct: 209 GHESRVGSLAW---DNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSE-SG 264
Query: 332 CMLASGSDDGTISI--RDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSS--ED 387
ASG +D + I R L K+ + FE H ++ ++ W P +AS LA D
Sbjct: 265 NKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGD 324
Query: 388 NQLTIWD 394
++ W+
Sbjct: 325 GKIKFWN 331
>AT3G44530.1 | Symbols: HIRA | homolog of histone chaperone HIRA |
chr3:16116026-16121247 FORWARD LENGTH=1058
Length = 1058
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 162 VTHEGCVNRIRSMTQNPHICATWADTGHVQIWDMSSHLNSLAETETGAQGVAAV---FNQ 218
V HEG + N AT V+IW+M S L +T + +A + F
Sbjct: 9 VKHEGLQIFSIDVQPNGERFATGGGDHKVRIWNMKSVDKDLQNIDTKERLLATLRDHFGS 68
Query: 219 VPLHKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWE--PTSAAT-WNIDNAPFI---- 271
V ++ K+ Y + SG + I + E P S T + AP +
Sbjct: 69 VNCVRWA-KNSRY-----------VASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWK 116
Query: 272 ------GHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLS 325
GHTA V DL WSP +D + AS S+D ++ IW+ R G + H + V ++
Sbjct: 117 AVMTLRGHTADVVDLNWSP-DDSMLASGSLDNTVHIWNMRTGMC-TTVLRGHLSLVKGVT 174
Query: 326 WNRLAPCMLASGSDDGTISI 345
W+ + +AS SDD T+ I
Sbjct: 175 WDPIG-SFIASQSDDKTVII 193
>AT3G44530.2 | Symbols: HIRA | homolog of histone chaperone HIRA |
chr3:16116026-16121247 FORWARD LENGTH=1040
Length = 1040
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 272 GHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAP 331
GHTA V DL WSP +D + AS S+D ++ IW+ R G + H + V ++W+ +
Sbjct: 123 GHTADVVDLNWSP-DDSMLASGSLDNTVHIWNMRTGMC-TTVLRGHLSLVKGVTWDPIG- 179
Query: 332 CMLASGSDDGTISI 345
+AS SDD T+ I
Sbjct: 180 SFIASQSDDKTVII 193
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 22/195 (11%)
Query: 209 AQGVAAVFNQVPLHK-FKHKD--EGYAIDWSPVVPGR----LVSGDCNNCIYLWEPTSAA 261
+ G A VP++K ++H EG+ S V L S + + LW T+ +
Sbjct: 17 STGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYS 76
Query: 262 TWNIDNAPFIGHTASVEDLQWSPTEDHVFASCSVDGSIAIWDTRLGKSPAAFFKAHKADV 321
+ + GH++ + DL WS ++ H S S D ++ IWD R SP K +
Sbjct: 77 LIH----RYEGHSSGISDLAWS-SDSHYTCSASDDCTLRIWDAR---SPYECLKVLRGHT 128
Query: 322 NVLSWNRLAP--CMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEAS 379
N + P ++ SGS D TI I +++ K V + H I+S+ ++ + S
Sbjct: 129 NFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK----CVRMIKAHSMPISSVHFN-RDGS 183
Query: 380 SLAVSSEDNQLTIWD 394
+ +S D IWD
Sbjct: 184 LIVSASHDGSCKIWD 198
>AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like
superfamily protein | chr4:14597728-14599157 FORWARD
LENGTH=321
Length = 321
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 244 VSGDCNNCIYLWEPTSAATWNI--------DNAPFIGHTAS----VEDLQWSPTEDHVFA 291
V+G + + LW+ A+W + +AP S V + WSP A
Sbjct: 119 VAGGSSASVKLWD---TASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKR-LA 174
Query: 292 SCSVDGSIAIWDTRLGKSPAAFFKAHKADVNVLSWNRLAPCMLASGSDDGTISIRDLRLL 351
S+DG+I ++D K + H V L ++ + P +L SGSDDG +++ D
Sbjct: 175 CGSMDGTICVFDVDRSKL-LHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD---- 229
Query: 352 KEGDSVVAHFEYHKRSITSIEWSPHEASSLAVSSEDNQLTIWDLSLE 398
EG +++ H + S++ SP + ++A S D + +WDL +
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASP-DGGAIATGSSDRTVRLWDLKMR 275
>AT3G01340.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:127557-128465 REVERSE LENGTH=302
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 268 APFIGHTASVEDLQWS-PTEDHVFASCSVDGSIAIWD--TRLGKSPAAFFKAHKADVNVL 324
A GH V + W+ P + ASCS DG I +W + + A F HK VN +
Sbjct: 50 ATLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSI 109
Query: 325 SWNRLAP----CMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASS 380
+W AP LA G+ DG IS+ R D+ + H +TS+ W+P
Sbjct: 110 AW---APHELGLSLACGASDGNISVFSARADGGWDTTKID-QAHPVGVTSVSWAPATEPG 165
Query: 381 LAVSS 385
VSS
Sbjct: 166 ALVSS 170
>AT3G01340.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:127557-128465 REVERSE LENGTH=302
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 268 APFIGHTASVEDLQWS-PTEDHVFASCSVDGSIAIWD--TRLGKSPAAFFKAHKADVNVL 324
A GH V + W+ P + ASCS DG I +W + + A F HK VN +
Sbjct: 50 ATLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSI 109
Query: 325 SWNRLAP----CMLASGSDDGTISIRDLRLLKEGDSVVAHFEYHKRSITSIEWSPHEASS 380
+W AP LA G+ DG IS+ R D+ + H +TS+ W+P
Sbjct: 110 AW---APHELGLSLACGASDGNISVFSARADGGWDTTKID-QAHPVGVTSVSWAPATEPG 165
Query: 381 LAVSS 385
VSS
Sbjct: 166 ALVSS 170