Miyakogusa Predicted Gene
- Lj0g3v0057669.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0057669.1 tr|A8I9X7|A8I9X7_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_141205 PE=4
SV=1,36.02,5e-19,YbeD-like,NULL; DUF493,Uncharacterised protein family
UPF0250; seg,NULL,CUFF.2534.1
(199 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27385.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 190 4e-49
AT1G27385.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 189 9e-49
AT1G27385.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 184 5e-47
AT1G27385.4 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 184 5e-47
>AT1G27385.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF493 (InterPro:IPR007454); Has 76
Blast hits to 76 proteins in 23 species: Archae - 0;
Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
| chr1:9511129-9512820 REVERSE LENGTH=202
Length = 202
Score = 190 bits (483), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/127 (76%), Positives = 106/127 (83%), Gaps = 7/127 (5%)
Query: 80 ETVLKAISEVSKSEGRVG-------GGTVADDSTKEWMALDQKVNTYPTVRGFTAIGTGG 132
E VLKAISEVSK++GRVG GGTVADDS K+W+ LDQKVNTYPT RGFTAIGTGG
Sbjct: 76 EAVLKAISEVSKTDGRVGKTTNMIIGGTVADDSAKDWLELDQKVNTYPTERGFTAIGTGG 135
Query: 133 QDFVQAMLVAVESVIQQPIPQGQVKQKLSSGGKYVSVNIGPIEVVSFEQVQAVYNAMRRD 192
DFV AM+VAVESVI + IP+ VKQ LSS GKYVSVNIGPI+VVS EQVQAVYNAMRRD
Sbjct: 136 NDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGKYVSVNIGPIQVVSSEQVQAVYNAMRRD 195
Query: 193 GRIKYFL 199
R+KYFL
Sbjct: 196 ERMKYFL 202
>AT1G27385.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF493 (InterPro:IPR007454); Has 77
Blast hits to 77 proteins in 22 species: Archae - 0;
Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 72;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
| chr1:9510475-9512820 REVERSE LENGTH=230
Length = 230
Score = 189 bits (481), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 105/127 (82%), Gaps = 7/127 (5%)
Query: 80 ETVLKAISEVSKSEGRVG-------GGTVADDSTKEWMALDQKVNTYPTVRGFTAIGTGG 132
E VLKAISEVSK++GRVG GGTVADDS K+W+ LDQKVNTYPT RGFTAIGTGG
Sbjct: 76 EAVLKAISEVSKTDGRVGKTTNMIIGGTVADDSAKDWLELDQKVNTYPTERGFTAIGTGG 135
Query: 133 QDFVQAMLVAVESVIQQPIPQGQVKQKLSSGGKYVSVNIGPIEVVSFEQVQAVYNAMRRD 192
DFV AM+VAVESVI + IP+ VKQ LSS GKYVSVNIGPI+VVS EQVQAVYNAMRRD
Sbjct: 136 NDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGKYVSVNIGPIQVVSSEQVQAVYNAMRRD 195
Query: 193 GRIKYFL 199
R+KYF
Sbjct: 196 ERMKYFF 202
>AT1G27385.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF493
(InterPro:IPR007454); Has 76 Blast hits to 76 proteins
in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0;
Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink). | chr1:9511129-9512820 REVERSE
LENGTH=201
Length = 201
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 105/127 (82%), Gaps = 8/127 (6%)
Query: 80 ETVLKAISEVSKSEGRVG-------GGTVADDSTKEWMALDQKVNTYPTVRGFTAIGTGG 132
E VLKAIS VSK++GRVG GGTVADDS K+W+ LDQKVNTYPT RGFTAIGTGG
Sbjct: 76 EAVLKAIS-VSKTDGRVGKTTNMIIGGTVADDSAKDWLELDQKVNTYPTERGFTAIGTGG 134
Query: 133 QDFVQAMLVAVESVIQQPIPQGQVKQKLSSGGKYVSVNIGPIEVVSFEQVQAVYNAMRRD 192
DFV AM+VAVESVI + IP+ VKQ LSS GKYVSVNIGPI+VVS EQVQAVYNAMRRD
Sbjct: 135 NDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGKYVSVNIGPIQVVSSEQVQAVYNAMRRD 194
Query: 193 GRIKYFL 199
R+KYFL
Sbjct: 195 ERMKYFL 201
>AT1G27385.4 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF493
(InterPro:IPR007454); Has 79 Blast hits to 79 proteins
in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0;
Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink). | chr1:9510475-9512820 REVERSE
LENGTH=254
Length = 254
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 105/127 (82%), Gaps = 8/127 (6%)
Query: 80 ETVLKAISEVSKSEGRVG-------GGTVADDSTKEWMALDQKVNTYPTVRGFTAIGTGG 132
E VLKAIS VSK++GRVG GGTVADDS K+W+ LDQKVNTYPT RGFTAIGTGG
Sbjct: 76 EAVLKAIS-VSKTDGRVGKTTNMIIGGTVADDSAKDWLELDQKVNTYPTERGFTAIGTGG 134
Query: 133 QDFVQAMLVAVESVIQQPIPQGQVKQKLSSGGKYVSVNIGPIEVVSFEQVQAVYNAMRRD 192
DFV AM+VAVESVI + IP+ VKQ LSS GKYVSVNIGPI+VVS EQVQAVYNAMRRD
Sbjct: 135 NDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGKYVSVNIGPIQVVSSEQVQAVYNAMRRD 194
Query: 193 GRIKYFL 199
R+KYFL
Sbjct: 195 ERMKYFL 201